BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046921
(84 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 124 bits (311), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/82 (71%), Positives = 69/82 (84%)
Query: 3 DEEQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVIS 62
D QD ADRER+FKRFD NGDGKIS+SEL D L L SV+ +EV++MMAEIDTDGDG IS
Sbjct: 5 DTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLGSVTPDEVRRMMAEIDTDGDGFIS 64
Query: 63 YDEFTAFAEANRGLIKNVAKIF 84
+DEFT FA ANRGL+K+V+KIF
Sbjct: 65 FDEFTDFARANRGLVKDVSKIF 86
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 120 bits (302), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 67/82 (81%)
Query: 3 DEEQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVIS 62
D QDKA+RER+FKRFD NGDGKISA+EL + L L S++ +EVK MMAEIDTDGDG IS
Sbjct: 3 DHPQDKAERERIFKRFDANGDGKISAAELGEALKTLGSITPDEVKHMMAEIDTDGDGFIS 62
Query: 63 YDEFTAFAEANRGLIKNVAKIF 84
+ EFT F ANRGL+K+VAKIF
Sbjct: 63 FQEFTDFGRANRGLLKDVAKIF 84
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 102 bits (255), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 59/75 (78%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTAF 69
D ER+FKRFD NGDGKIS SEL D L L S S +EV++MMAEIDTDGDG I ++EF +F
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISF 62
Query: 70 AEANRGLIKNVAKIF 84
AN GL+K+VAK+F
Sbjct: 63 CNANPGLMKDVAKVF 77
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 102 bits (255), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 59/75 (78%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTAF 69
D ER+FKRFD NGDGKIS SEL D L L S S +EV++MMAEIDTDGDG I ++EF +F
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLGSTSADEVQRMMAEIDTDGDGFIDFNEFISF 63
Query: 70 AEANRGLIKNVAKIF 84
AN GL+K+VAK+F
Sbjct: 64 CNANPGLMKDVAKVF 78
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 52.0 bits (123), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 377 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 435
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 436 QVNYEEFVQMMTA 448
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 64 DEF 66
EF
Sbjct: 367 PEF 369
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 52.0 bits (123), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 4 EEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVIS 62
EEQ + RE F FD +G G I A EL + AL EE+KKM++EID DG G I
Sbjct: 24 EEQKQEIRE-AFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 82
Query: 63 YDEFTAFAEANRG 75
++EF A G
Sbjct: 83 FEEFLTMMTAKMG 95
Score = 30.4 bits (67), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 13 RVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
+ F+ FD + G I+ +L L ++++EE+++M+AE D + D I DEF
Sbjct: 105 KAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEF 159
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 377 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 435
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 436 QVNYEEFVQMMTA 448
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 64 DEF 66
EF
Sbjct: 367 PEF 369
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 340 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 398
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 399 QVNYEEFVQMMTA 411
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 270 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 329
Query: 64 DEF 66
EF
Sbjct: 330 PEF 332
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 378 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 436
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 437 QVNYEEFVQMMTA 449
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 308 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 367
Query: 64 DEF 66
EF
Sbjct: 368 PEF 370
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 343 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 401
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 402 QVNYEEFVQMMTA 414
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
Query: 64 DEF 66
EF
Sbjct: 333 PEF 335
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 377 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 435
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 436 QVNYEEFVQMMTA 448
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 64 DEF 66
EF
Sbjct: 367 PEF 369
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 343 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 401
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 402 QVNYEEFVQMMTA 414
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 273 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 332
Query: 64 DEF 66
EF
Sbjct: 333 PEF 335
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 368 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 426
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 427 QVNYEEFVQMMTA 439
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DGDG I +
Sbjct: 298 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 357
Query: 64 DEF 66
EF
Sbjct: 358 PEF 360
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 51.6 bits (122), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 376 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 434
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 435 QVNYEEFVQMMTA 447
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DGDG I +
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 64 DEF 66
EF
Sbjct: 366 PEF 368
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 77 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDQMIREADIDGDG 135
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 136 QVNYEEFVQMMTA 148
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 1 MADE--EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDG 57
MAD+ E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 58 DGVISYDEF 66
+G I + EF
Sbjct: 61 NGTIDFPEF 69
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 51.2 bits (121), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 77 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 135
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 136 QVNYEEFVQMMTA 148
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 1 MADE--EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDG 57
MAD+ E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 58 DGVISYDEF 66
+G I + EF
Sbjct: 61 NGTIDFPEF 69
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal
Sensor Domain Of Centrin
Length = 96
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 4 EEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVIS 62
EEQ + RE F FD +G G I A EL + AL EE+KKM++EID DG G I
Sbjct: 26 EEQKQEIRE-AFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTID 84
Query: 63 YDEFTAFAEAN 73
++EF A
Sbjct: 85 FEEFLTMMTAK 95
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin And 1mm Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of
Bordetella Pertussis In Presence Of C-Terminal
Calmodulin
Length = 74
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 2 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 60
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 61 QVNYEEFVQMMTA 73
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin
Carboxy-Terminal Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 1 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 59
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 60 QVNYEEFVQMMTA 72
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 77 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 135
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 136 QVNYEEFVQMMTA 148
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 1 MADE--EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDG 57
MAD+ E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 58 DGVISYDEF 66
+G I + EF
Sbjct: 61 NGTIDFPEF 69
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal
Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal
Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe
Bound With Er Alpha Peptide
Length = 67
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG ++Y+EF A
Sbjct: 8 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 66
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 74 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 132
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 133 QVNYEEFVQMMTA 145
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 64 DEF 66
EF
Sbjct: 64 PEF 66
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 77 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 135
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 136 QVNYEEFVQMMTA 148
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 1 MADE--EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDG 57
MAD+ E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 58 DGVISYDEF 66
+G I + EF
Sbjct: 61 NGTIDFPEF 69
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 72 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 130
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 131 QVNYEEFVQMMTA 143
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 64 DEF 66
EF
Sbjct: 62 PEF 64
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG ++Y+EF A
Sbjct: 389 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DGDG I +
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 64 DEF 66
EF
Sbjct: 366 PEF 368
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG ++Y+EF A
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DGDG I +
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 366
Query: 64 DEF 66
EF
Sbjct: 367 PEF 369
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG ++Y+EF A
Sbjct: 390 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 448
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 307 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 366
Query: 64 DEF 66
EF
Sbjct: 367 PEF 369
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 73 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 131
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 132 QVNYEEFVQMMTA 144
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 3 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 62
Query: 64 DEF 66
EF
Sbjct: 63 PEF 65
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 74 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 132
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 133 QVNYEEFVQMMTA 145
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 64 DEF 66
EF
Sbjct: 64 PEF 66
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 77 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDG 135
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 136 QVNYEEFVQMMTA 148
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 64 DEF 66
EF
Sbjct: 67 PEF 69
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 76 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVDEMIREADIDGDG 134
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 135 QVNYEEFVQMMTA 147
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 76 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 134
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 135 QVNYEEFVQMMTA 147
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 50.8 bits (120), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 80 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 138
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 139 QVNYEEFVQMMTA 151
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 1 MADE--EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDG 57
MAD+ E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG
Sbjct: 4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 63
Query: 58 DGVISYDEF 66
+G I + EF
Sbjct: 64 NGTIDFPEF 72
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 82 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 140
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 141 QVNYEEFVQMMTA 153
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 12 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 71
Query: 64 DEF 66
EF
Sbjct: 72 PEF 74
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 76 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 134
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 135 QVNYEEFVQMMTA 147
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG ++Y+EF A
Sbjct: 389 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 447
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DGDG I +
Sbjct: 306 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 365
Query: 64 DEF 66
EF
Sbjct: 366 PEF 368
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 77 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 135
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 136 QVNYEEFVQMMTA 148
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 1 MADE--EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDG 57
MAD+ E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 58 DGVISYDEF 66
+G I + EF
Sbjct: 61 NGTIDFPEF 69
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 78 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 136
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 137 QVNYEEFVQMMTA 149
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 1 MADE--EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDG 57
MAD+ E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 58 DGVISYDEF 66
+G I + EF
Sbjct: 62 NGTIDFPEF 70
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From
Calmodulin To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG ++Y+EF A
Sbjct: 12 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 70
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 4 EEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVIS 62
EEQ + RE F FD +G G I A EL + AL EE+KKM+A+ID DG G I
Sbjct: 4 EEQKQEIRE-AFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTID 62
Query: 63 YDEFTAFAEANRG 75
++EF A G
Sbjct: 63 FEEFLQMMTAKMG 75
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 13 RVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
+ F+ FD + GKIS L L +++DEE+++M+ E D DGDG ++ +EF
Sbjct: 85 KAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQEMIDEADRDGDGEVNEEEF 139
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG ++Y+EF A
Sbjct: 11 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMMTA 69
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 50.4 bits (119), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 76 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 134
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 135 QVNYEEFVQMMTA 147
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DGDG I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 74 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 132
Query: 60 VISYDEF 66
++Y+EF
Sbjct: 133 QVNYEEF 139
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 4 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 63
Query: 64 DEF 66
EF
Sbjct: 64 PEF 66
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCL-NALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
FK FD +GDG IS +EL + N V+DEE+ +M+ E D DGDG+I+Y+EF
Sbjct: 89 FKIFDRDGDGFISPAELRFVMINLGEKVTDEEIDEMIREADFDGDGMINYEEF 141
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F +FD G GKI+ EL + L E E++ ++AE + + +G +++
Sbjct: 6 EEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQLNF 65
Query: 64 DEF 66
EF
Sbjct: 66 TEF 68
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 75 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 133
Query: 60 VISYDEF 66
++Y+EF
Sbjct: 134 QVNYEEF 140
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 5 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 64
Query: 64 DEF 66
EF
Sbjct: 65 PEF 67
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 76 MKDTDSEEEIRE-AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 134
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 135 QVNYEEFVTMMTA 147
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With
Pyrophosphate
Length = 67
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDGVISYDEFT 67
F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG ++Y+EF
Sbjct: 11 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFV 64
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 15 FKRFDLNGDGKISASELADCL-NALSSVSDEEVKKMMAEIDTDGDGVISYDEFT 67
FK FD + +G ISASEL + N ++DEEV++M+ E D DGDG ++Y+EF
Sbjct: 15 FKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 68
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISY 63
E+ D + F FD +GDG I+ ELA + +L + ++EE++ M++E+D DG+G I +
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 64 DEFTAF 69
DEF +
Sbjct: 66 DEFLSL 71
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 50.1 bits (118), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 15 FKRFDLNGDGKISASELADCL-NALSSVSDEEVKKMMAEIDTDGDGVISYDEFT 67
FK FD + +G ISASEL + N ++DEEV++M+ E D DGDG ++Y+EF
Sbjct: 10 FKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 63
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISY 63
E+ D + F FD +GDG I+ ELA + +L + ++EE++ M++E+D DG+G I +
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 64 DEFTAF 69
DEF +
Sbjct: 66 DEFLSL 71
Score = 48.9 bits (115), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 15 FKRFDLNGDGKISASELADCL-NALSSVSDEEVKKMMAEIDTDGDGVISYDEFT 67
FK FD + +G ISASEL + N ++DEEV++M+ E D DGDG ++Y+EF
Sbjct: 89 FKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFV 142
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISY 63
E+ D + F FD +GDG I+ ELA + +L + ++EE++ M++E+D DG+G I +
Sbjct: 6 EEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTIEF 65
Query: 64 DEFTAF 69
DEF +
Sbjct: 66 DEFLSL 71
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin
Bound To The Iq Motif Of Nav1.2
Length = 73
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFT 67
FK FD +G+G ISA+EL + L ++D+EV +M+ E D DGDG I+Y+EF
Sbjct: 14 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFV 67
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
FK FD +G+G ISA+EL + L ++D+EV +M+ E D DGDG I+Y+EF
Sbjct: 89 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 141
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEFTAF 69
EF +
Sbjct: 66 PEFLSL 71
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
FK FD +G+G ISA+EL + L ++D+EV +M+ E D DGDG I+Y+EF
Sbjct: 89 FKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEF 141
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEFTAF 69
EF +
Sbjct: 66 PEFLSL 71
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 49.7 bits (117), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 44/67 (65%), Gaps = 2/67 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G +SA+EL + L +SDEEV +M+ DTDGDG
Sbjct: 76 MKDTDNEEEIRE-AFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDG 134
Query: 60 VISYDEF 66
++Y+EF
Sbjct: 135 QVNYEEF 141
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISYDEF 66
F FD +GDG I+ EL + +L E E++ MM+EID DG+G + + EF
Sbjct: 16 FSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEF 68
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 77 MKDTDSEEEIRE-AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 135
Query: 60 VISYDEFTAF 69
++Y+EF
Sbjct: 136 QVNYEEFVTM 145
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 1 MADE--EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDG 57
MAD+ E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 58 DGVISYDEF 66
+G I + EF
Sbjct: 61 NGTIDFPEF 69
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 77 MKDTDSEEEIRE-AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 135
Query: 60 VISYDEFTAF 69
++Y+EF
Sbjct: 136 QVNYEEFVTM 145
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 1 MADE--EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDG 57
MAD+ E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 58 DGVISYDEF 66
+G I + EF
Sbjct: 61 NGTIDFPEF 69
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 49.7 bits (117), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 76 MKDTDSEEEIRE-AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 134
Query: 60 VISYDEFTAF 69
++Y+EF
Sbjct: 135 QVNYEEFVTM 144
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 49.3 bits (116), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG ++Y+EF
Sbjct: 89 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEF 141
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 9 ADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISYDEF 66
A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I + EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG ++Y+EF
Sbjct: 86 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEF 138
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 9 ADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISYDEF 66
A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I + EF
Sbjct: 7 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 65
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG ++Y+EF
Sbjct: 89 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEF 141
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 9 ADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISYDEF 66
A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I + EF
Sbjct: 10 AEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E + DGDG
Sbjct: 76 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDG 134
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 135 QVNYEEFVQMMTA 147
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 49.3 bits (116), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAF 69
F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG ++Y+EF
Sbjct: 87 FRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVTM 142
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
Score = 25.4 bits (54), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/59 (27%), Positives = 28/59 (47%)
Query: 8 KADRERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
+A+ + + D +G+G I E + S+EE+++ D DG+G IS E
Sbjct: 45 EAELQDMINEVDADGNGTIDFPEFLTMMARKMKDSEEEIREAFRVFDKDGNGFISAAEL 103
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 48.9 bits (115), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 44/70 (62%), Gaps = 2/70 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ FD +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 77 MKDTDSEEEIRE-AFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIRESDIDGDG 135
Query: 60 VISYDEFTAF 69
++Y+EF
Sbjct: 136 QVNYEEFVTM 145
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%), Gaps = 3/69 (4%)
Query: 1 MADE--EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDG 57
MAD+ E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 58 DGVISYDEF 66
+G I + EF
Sbjct: 61 NGTIDFPEF 69
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 48.5 bits (114), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
F+ FD +G+G ISA+EL + L ++DEEV +M+ E + DGDG ++Y+EF A
Sbjct: 84 FRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREANIDGDGQVNYEEFVQMMTA 142
Score = 43.9 bits (102), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 2 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 61
Query: 64 DEF 66
EF
Sbjct: 62 PEF 64
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 48.1 bits (113), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
F+ FD + +G ISA+EL + L ++DEEV +M+ E D DGDG I+YDEF
Sbjct: 90 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYDEF 142
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISYDEF 66
F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I + EF
Sbjct: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
F+ FD +G+G ISA++L + L ++DEEV +M+ E D DGDG ++Y++F A
Sbjct: 13 FRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQMMTA 71
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 36/54 (66%), Gaps = 1/54 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFT 67
F+ FD + +G ISA+EL + L ++DEEV +M+ E D DGDG I+Y+EF
Sbjct: 10 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFV 63
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD + G ISASELA + +L S S+ EV +M EID DG+ I +
Sbjct: 7 EEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAIEF 66
Query: 64 DEFTAF 69
EF A
Sbjct: 67 SEFLAL 72
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAF 69
FK FD NGDG ISA+EL L ++ ++D EV +M+ E+ +DG G I+ +F A
Sbjct: 90 FKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDEMLREV-SDGSGEINIKQFAAL 144
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 47.0 bits (110), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 13 RVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDGVISYDEFTA 68
RVF++FD N DGK+S E + A S + E++ K EID DG+G ++ DEFT+
Sbjct: 5 RVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTS 61
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 37/55 (67%), Gaps = 2/55 (3%)
Query: 15 FKRFDLNGDGKISASELADCLNAL--SSVSDEEVKKMMAEIDTDGDGVISYDEFT 67
F+ FD NGDG+IS SEL + + AL V ++++++ ++D +GDG + ++EF
Sbjct: 94 FREFDTNGDGEISTSELREAMRALLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 148
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISYDEFT 67
F+ FD + DG I+ +L +C+ + + E E+ ++ +I+ + G + +D+F
Sbjct: 17 FREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 70
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 47.0 bits (110), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ D +G+G ISA+EL + L ++DEEV +M+ E D DGDG
Sbjct: 22 MKDTDSEEEIRE-AFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 80
Query: 60 VISYDEFTAFAEA 72
++Y+EF A
Sbjct: 81 QVNYEEFVQMMTA 93
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal
Domain Of Yeast Calmodulin
Length = 77
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD + +G IS+SELA + +L S S+ EV +M EID DG+ I +
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 64 DEFTAF 69
EF A
Sbjct: 66 SEFLAL 71
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 46.6 bits (109), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
F+ FD + +G ISA+EL + L ++DEEV +M+ E D DGDG I+Y+EF
Sbjct: 90 FRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEF 142
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISYDEF 66
F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I + EF
Sbjct: 17 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 69
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 46.2 bits (108), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD + +G IS+SELA + +L S S+ EV +M EID DG+ I +
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 64 DEFTAF 69
EF A
Sbjct: 66 SEFLAL 71
Score = 30.8 bits (68), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 15 FKRFDLNGDGKISASELADCLNAL 38
FK FD NGDG ISA+EL L ++
Sbjct: 89 FKVFDKNGDGLISAAELKHVLTSI 112
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
F+ FD +G+G ISA+EL L ++DEEV + + E D DGDG ++Y+EF
Sbjct: 90 FRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDQXIREADIDGDGQVNYEEF 142
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL +L E E++ + E+D DG+G I +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 66
Query: 64 DEF 66
EF
Sbjct: 67 PEF 69
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD + +G IS+SELA + +L S S+ EV +M EID DG+ I +
Sbjct: 7 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 66
Query: 64 DEFTAF 69
EF A
Sbjct: 67 SEFLAL 72
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAF 69
FK FD NGDG ISA+EL L ++ ++D EV M+ E+ +DG G I+ +F A
Sbjct: 90 FKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEINIQQFAAL 144
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 46.2 bits (108), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD + +G IS+SELA + +L S S+ EV +M EID DG+ I +
Sbjct: 6 EEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEF 65
Query: 64 DEFTAF 69
EF A
Sbjct: 66 SEFLAL 71
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 2/56 (3%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAF 69
FK FD NGDG ISA+EL L ++ ++D EV M+ E+ +DG G I+ +F A
Sbjct: 89 FKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDDMLREV-SDGSGEINIQQFAAL 143
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human
N60d Calmodulin Refined With Paramagnetism Based
Strategy
Length = 79
Score = 45.8 bits (107), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DGDG I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 45.8 bits (107), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDGVISYDEF 66
F+ FD +G+G ISA+EL L ++DEEV + + E D DGDG ++Y+EF
Sbjct: 89 FRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL +L E E++ + E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 45.8 bits (107), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 15 FKRFDLNGDGKISASELADCLNAL--SSVSDEEVKKMMAEIDTDGDGVISYDEFT 67
F+ FD NGDG+IS SEL + + L V ++++++ ++D +GDG + ++EF
Sbjct: 13 FREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 67
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 45.4 bits (106), Expect = 8e-06, Method: Composition-based stats.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
ER F+ FD + GKIS++ELA +S V E K +++E+D + DG + +DEF
Sbjct: 421 ERAFRXFDSDNSGKISSTELATIF-GVSDVDSETWKSVLSEVDKNNDGEVDFDEF 474
Score = 34.3 bits (77), Expect = 0.018, Method: Composition-based stats.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 14 VFKRFDLNGDGKISASELADCLNAL------------SSVSDEEVKKMMAEIDTDGDGVI 61
+F + D NGDG++ +EL + L +S + EV +++ +D D +G I
Sbjct: 340 IFHKXDKNGDGQLDRAELIEGYKELXRXKGQDASXLDASAVEHEVDQVLDAVDFDKNGYI 399
Query: 62 SYDEFTAFAEANRGLI 77
Y EF A + L+
Sbjct: 400 EYSEFVTVAXDRKTLL 415
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 45.4 bits (106), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDGVISYDEF 66
F+ FD +G+G ISA+EL L ++DEEV + + E D DGDG ++Y+EF
Sbjct: 89 FRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVDEXIREADIDGDGQVNYEEF 141
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL +L + ++ E++ + E+D DG+G I++
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGTINF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 14 VFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
+F+ FD N DG I A ELA+ A V+DEE++ +M + D + DG I +DEF E
Sbjct: 98 LFRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEG 157
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
F FD +G G IS EL + L + + EE+ ++ E+D DG G I ++EF
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEF 75
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 45.4 bits (106), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 15 FKRFDLNGDGKISASELADCLNAL--SSVSDEEVKKMMAEIDTDGDGVISYDEFT 67
F+ FD NGDG+IS SEL + + L V ++++++ ++D +GDG + ++EF
Sbjct: 94 FREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 148
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISYDEFTAF 69
F+ FD + DG I+ +L +C+ + + E E+ ++ +I+ + G + +D+F
Sbjct: 17 FREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVEL 72
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 45.1 bits (105), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 36/55 (65%), Gaps = 2/55 (3%)
Query: 15 FKRFDLNGDGKISASELADCLNAL--SSVSDEEVKKMMAEIDTDGDGVISYDEFT 67
F+ FD NGDG+IS SEL + + L V ++++++ ++D +GDG + ++EF
Sbjct: 108 FREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFV 162
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISYDEFTAF 69
F+ FD + DG I+ +L +C+ + + E E+ ++ +I+ + G + +D+F
Sbjct: 31 FREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVEL 86
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
ER F+ FD + GKIS++ELA +S V E K +++E+D + DG + +DEF
Sbjct: 444 ERAFRMFDSDNSGKISSTELATIF-GVSDVDSETWKSVLSEVDKNNDGEVDFDEF 497
Score = 35.0 bits (79), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 14 VFKRFDLNGDGKISASELADCLNAL------------SSVSDEEVKKMMAEIDTDGDGVI 61
+F + D NGDG++ +EL + L +S + EV +++ +D D +G I
Sbjct: 363 IFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYI 422
Query: 62 SYDEFTAFAEANRGLI 77
Y EF A + L+
Sbjct: 423 EYSEFVTVAMDRKTLL 438
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
ER F+ FD + GKIS++ELA +S V E K +++E+D + DG + +DEF
Sbjct: 445 ERAFRMFDSDNSGKISSTELATIF-GVSDVDSETWKSVLSEVDKNNDGEVDFDEF 498
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 14 VFKRFDLNGDGKISASELADCLNAL------------SSVSDEEVKKMMAEIDTDGDGVI 61
+F + D NGDG++ +EL + L +S + EV +++ +D D +G I
Sbjct: 364 IFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYI 423
Query: 62 SYDEFTAFAEANRGLI 77
Y EF A + L+
Sbjct: 424 EYSEFVTVAMDRKTLL 439
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 45.1 bits (105), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
ER F+ FD + GKIS++ELA +S V E K +++E+D + DG + +DEF
Sbjct: 421 ERAFRMFDSDNSGKISSTELATIF-GVSDVDSETWKSVLSEVDKNNDGEVDFDEF 474
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 14 VFKRFDLNGDGKISASELADCLNAL------------SSVSDEEVKKMMAEIDTDGDGVI 61
+F + D NGDG++ +EL + L +S + EV +++ +D D +G I
Sbjct: 340 IFHKMDKNGDGQLDRAELIEGYKELMRMKGQDASMLDASAVEHEVDQVLDAVDFDKNGYI 399
Query: 62 SYDEFTAFAEANRGLI 77
Y EF A + L+
Sbjct: 400 EYSEFVTVAMDRKTLL 415
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal
Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In
Calcium-Calmodulin: Solution Structure Of Halothane-Cam
N-Terminal Domain
Length = 76
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A
Binding Motif (Nscate) Peptide From The N-Terminal
Cytoplasmic Domain Of The L-Type Voltage-Cated Calcium
Channel Alpha1c Subunit
Length = 77
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal
Domain
Length = 76
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin
Amino- Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 44.7 bits (104), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 7 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 66
Query: 64 DEF 66
EF
Sbjct: 67 PEF 69
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 44.7 bits (104), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 43/73 (58%), Gaps = 2/73 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDG 59
M D + ++ RE F+ F +G+G ISA++L + L ++DEEV +M+ E DGDG
Sbjct: 377 MKDTDSEEEIRE-AFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVDEMIREAGIDGDG 435
Query: 60 VISYDEFTAFAEA 72
++Y++F A
Sbjct: 436 QVNYEQFVQMMTA 448
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
In The Presence Of Zn2+
Length = 79
Score = 44.7 bits (104), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
F+ FD N DG I A ELA+ A V+DEE++ +M + D + DG I +DEF E
Sbjct: 99 FRIFDRNADGYIDAEELAEIFRASGEHVTDEEIESLMKDGDKNNDGRIDFDEFLKMMEG 157
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
F FD +G G IS EL + L + + EE+ ++ E+D DG G I ++EF
Sbjct: 23 FDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTIDFEEF 75
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe
Bound With Er Alpha Peptide
Length = 80
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 44.3 bits (103), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISY 63
E+ A+ + F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 43.5 bits (101), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISY 63
E+ A+ + F +D +GDG I+ EL + +L + ++ E++ M+ E+D DG+G I +
Sbjct: 6 EEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDF 65
Query: 64 DEF 66
EF
Sbjct: 66 PEF 68
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 43.1 bits (100), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAE-IDTDGDGVISYDEFTAFA 70
E +FK+ D NGDG +S E+ +++ + +E++ +++ + ID DG+G I EFT FA
Sbjct: 3 EALFKQLDANGDGSVSYEEVKAFVSSKRPIKNEQLLQLIFKAIDIDGNGEIDLAEFTKFA 62
Query: 71 EA 72
A
Sbjct: 63 AA 64
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 7/72 (9%)
Query: 2 ADEEQDKADRER----VFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDG 57
A +EQD +D + ++K D +GDGK++ E+ E+V + + D +G
Sbjct: 64 AVKEQDLSDEKVGLKILYKLMDADGDGKLTKEEVTTFFKKFGY---EKVVDQIMKADANG 120
Query: 58 DGVISYDEFTAF 69
DG I+ +EF AF
Sbjct: 121 DGYITLEEFLAF 132
Score = 29.3 bits (64), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 49 MMAEIDTDGDGVISYDEFTAFAEANRGLIKN 79
+ ++D +GDG +SY+E AF + R IKN
Sbjct: 5 LFKQLDANGDGSVSYEEVKAFVSSKRP-IKN 34
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 6/59 (10%)
Query: 15 FKRFDLNGDGKISASELADCL---NALSSVSDE---EVKKMMAEIDTDGDGVISYDEFT 67
F+ FD++ DG+I+ +ELA L N ++++ +VKKM+ E+D +GDG I + EF+
Sbjct: 131 FRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKKMIREVDKNGDGKIDFYEFS 189
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 29/66 (43%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEANR 74
F D G G I+ +L L + ++ +ID+DG G I Y EF A A R
Sbjct: 61 FLHLDEEGKGNITKLQLRKGLERSGLMLPPNFDLLLDQIDSDGSGNIDYTEFLAAAIDRR 120
Query: 75 GLIKNV 80
L K +
Sbjct: 121 QLSKKL 126
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEFT 67
D + F+ FD +GDG I+ EL + L + EE+ M+ E D D DG ++Y+EF
Sbjct: 7 DLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 43.1 bits (100), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 12 ERVFKRFDLNGDGKISASELADCLN-ALSSVSDEEVKKMMAEIDTDGDGVISYDEFT 67
ER FK FD +G GKIS EL + A SS+ EE++ ++ ++D + DG + ++EF
Sbjct: 420 ERAFKMFDKDGSGKISTKELFKLFSQADSSIQMEELESIIEQVDNNKDGEVDFNEFV 476
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 15/72 (20%)
Query: 14 VFKRFDLNGDGKISASELADCL-----------NAL----SSVSDEEVKKMMAEIDTDGD 58
+F++ D N DG + EL N+L S ++++ +M +D DG
Sbjct: 336 IFRKLDTNNDGMLDRDELVRGYHEFMRLKGVDSNSLIQNEGSTIEDQIDSLMPLLDMDGS 395
Query: 59 GVISYDEFTAFA 70
G I Y EF A A
Sbjct: 396 GSIEYSEFIASA 407
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Query: 18 FDLNGDGKISASE-LADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDE-FTAFAEANRG 75
D++G G I SE +A ++ +S E +++ D DG G IS E F F++A+
Sbjct: 390 LDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQADSS 449
Query: 76 L 76
+
Sbjct: 450 I 450
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 42.7 bits (99), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Query: 13 RVFKRFDLNGDGKISASELADCLNALS--SVSDEEVKKMMAEIDTDGDGVISYDEFTAFA 70
R FK FD NGDG I E + + ++D EV++ M E D DG+GVI EF
Sbjct: 12 RAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFMDLI 71
Query: 71 EANRGLIK 78
+ ++ +K
Sbjct: 72 KKSKNALK 79
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 34/64 (53%), Gaps = 9/64 (14%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSSVSD---------EEVKKMMAEIDTDGDGVISYD 64
+FK+ D NGDG++ EL + N L + + EEV ++ E+D D +G I Y
Sbjct: 360 IFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYS 419
Query: 65 EFTA 68
EF +
Sbjct: 420 EFIS 423
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 13 RVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTA 68
R F FD + GKI+ ELA+ L L+S+S++ ++ E D + D +I +DEF +
Sbjct: 439 RAFNLFDTDKSGKITKEELAN-LFGLTSISEKTWNDVLGEADQNKDNMIDFDEFVS 493
Score = 25.8 bits (55), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 14 VFKRFDLNGDGKISASE-LADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
+ K D + +G I SE ++ C++ S+E +++ DTD G I+ +E
Sbjct: 404 ILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEEL 457
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 42.4 bits (98), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 4 EEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVIS 62
EEQ + RE F FD +G G I EL + AL EE+KKM++EID +G G ++
Sbjct: 27 EEQKQEIRE-AFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 85
Query: 63 YDEF 66
+ +F
Sbjct: 86 FGDF 89
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 42.4 bits (98), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISYDEFTAF 69
FK FD +G+G IS EL + +L + +E E++ ++ +D DGDG + ++EF
Sbjct: 42 FKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFEEFVTL 97
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 42.0 bits (97), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 1 MADEEQDKADRER--VFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDG 57
M D+ + K++ E +F+ FD N DG I EL L A ++++++++++M + D +
Sbjct: 85 MKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 58 DGVISYDEFTAF 69
DG I YDEF F
Sbjct: 145 DGRIDYDEFLEF 156
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 23 DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
DG IS EL + L + + EE+++M+ E+D DG G + +DEF
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISYDEF 66
F FD +GDG I+ EL + +L E E++ M+ E+D DG+G I + EF
Sbjct: 16 FSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEF 68
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
E F++FD +G+GKIS ELA L + + K+M++ ID++ DG + ++EF
Sbjct: 146 ESAFQKFDQDGNGKISVDELASVF-GLDHLESKTWKEMISGIDSNNDGDVDFEEF 199
Score = 35.0 bits (79), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSSVS---------DEEVKKMMAEIDTDGDGVISYD 64
+F+ D NGDG++ EL D + LS + EV ++ D D +G I Y
Sbjct: 68 IFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYS 127
Query: 65 EFTAFAEANRGLI 77
EF A + L+
Sbjct: 128 EFVTVAMDRKSLL 140
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 13 RVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTA 68
R F+ FD + GKIS L L +++DEE++ M+ E D DGDG I+ +EF A
Sbjct: 100 RAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAMIEEFDLDGDGEINENEFIA 156
Score = 34.3 bits (77), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISY 63
E+ K + F FD+N DG + EL + AL + E+ ++ E D++G ++ Y
Sbjct: 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEGRHLMKY 78
Query: 64 DEF 66
D+F
Sbjct: 79 DDF 81
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac
Troponin C Bound To The N Terminal Domain Of Cardiac
Troponin I
Length = 81
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 1 MADEEQDKADRER--VFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDG 57
M D+ + K + E +F+ FD N DG I EL L A ++++++++++M + D +
Sbjct: 5 MKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 64
Query: 58 DGVISYDEFTAFAEA 72
DG I YDEF F +
Sbjct: 65 DGRIDYDEFLEFMKG 79
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 1 MADEEQDKADRER--VFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDG 57
M D+ + K + E +F+ FD N DG I EL L A ++++++++++M + D +
Sbjct: 85 MKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 58 DGVISYDEFTAF 69
DG I YDEF F
Sbjct: 145 DGRIDYDEFLEF 156
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 23 DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
DG IS EL + L + + EE+++M+ E+D DG G + +DEF
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 41.6 bits (96), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
E F++FD +G+GKIS ELA L + + K+M++ ID++ DG + ++EF
Sbjct: 429 ESAFQKFDQDGNGKISVDELASVF-GLDHLESKTWKEMISGIDSNNDGDVDFEEF 482
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 9/73 (12%)
Query: 14 VFKRFDLNGDGKISASELADCLNALS---------SVSDEEVKKMMAEIDTDGDGVISYD 64
+F+ D NGDG++ EL D + LS + EV ++ D D +G I Y
Sbjct: 351 IFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAADFDRNGYIDYS 410
Query: 65 EFTAFAEANRGLI 77
EF A + L+
Sbjct: 411 EFVTVAMDRKSLL 423
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 41.2 bits (95), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 1 MADEEQDKADRER--VFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDG 57
M D+ + K + E +F+ FD N DG I EL L A ++++++++++M + D +
Sbjct: 85 MKDDSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 58 DGVISYDEFTAF 69
DG I YDEF F
Sbjct: 145 DGRIDYDEFLEF 156
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 23 DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
DG IS EL + L + + EE+++M+ E+D DG G + +DEF
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 14 VFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
+F+ FD N DG I EL L A ++++++++++M + D + DG I YDEF F +
Sbjct: 12 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 71
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 14 VFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
+F+ FD N DG I EL L A ++++++++++M + D + DG I YDEF F +
Sbjct: 10 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 69
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 76
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 14 VFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
+F+ FD N DG I EL L A ++++++++++M + D + DG I YDEF F +
Sbjct: 15 LFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 74
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 41.2 bits (95), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 4 EEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVIS 62
EEQ + RE F FD +G G I EL + AL EE+KKM++EID +G G ++
Sbjct: 2 EEQKQEIRE-AFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 63 YDEF 66
+ +F
Sbjct: 61 FGDF 64
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 13 RVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
+ FK FD + GKIS L L +++DEE+++M+ E D DGDG +S EF
Sbjct: 83 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 137
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The
Cardiac Regulatory Protein Troponin C
Length = 72
Score = 40.8 bits (94), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 14 VFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
+F+ FD N DG I EL L A ++++++++++M + D + DG I YDEF F +
Sbjct: 11 LFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFMKG 70
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 40.4 bits (93), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%), Gaps = 6/59 (10%)
Query: 15 FKRFDLNGDGKISASELADCLNALS--SVSDEEVK----KMMAEIDTDGDGVISYDEFT 67
F+ +DL+ DGKIS E+ L + V++E+++ + + E D DGDG +S+ EFT
Sbjct: 120 FQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEFT 178
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 7/66 (10%)
Query: 8 KADRERVFKRFDLNGDGKISASELAD---CLNALSSVSDEEVK----KMMAEIDTDGDGV 60
KA+ E FK+ D NGDG ++A EL L+A ++S ++VK K++ D + DG
Sbjct: 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGK 65
Query: 61 ISYDEF 66
IS +EF
Sbjct: 66 ISKEEF 71
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 1 MADEEQDKADRER--VFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDG 57
M D+ + K++ E +F+ +D N DG I EL L A ++++++++++M + D +
Sbjct: 85 MKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 58 DGVISYDEFTAF 69
DG I YDEF F
Sbjct: 145 DGRIDYDEFLEF 156
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 23 DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
DG IS EL + L + + EE+++M+ E+D DG G + +DEF
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 40.0 bits (92), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 1 MADEEQDKADRER--VFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDG 57
M D+ + K++ E +F+ FD N DG I EL L A ++++++++++M + D +
Sbjct: 85 MKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 58 DGVISYDEFTAF 69
DG I YDE+ F
Sbjct: 145 DGRIDYDEWLEF 156
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 23 DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
DG IS EL + L + + EE+++M+ E+D DG G + +DEF
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium
Bound Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMM-AEIDTDGDGVISYDEFTAFA 70
E +FK D+NGDG +S E+ ++ ++ +E++ +++ ID DG+G I +EF F
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Query: 71 EANRG 75
+ +G
Sbjct: 63 GSIQG 67
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 7 DKADRERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
DK + ++K D++GDGK++ E+ E+V + + + D +GDG I+ +EF
Sbjct: 73 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI---EKVAEQVMKADANGDGYITLEEF 129
Query: 67 TAFA 70
F+
Sbjct: 130 LEFS 133
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 49 MMAEIDTDGDGVISYDEFTAFAEANRGLIKN 79
+ EID +GDG +SY+E AF R IKN
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRA-IKN 34
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 40.0 bits (92), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMM-AEIDTDGDGVISYDEFTAFA 70
E +FK D+NGDG +S E+ ++ ++ +E++ +++ ID DG+G I +EF F
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKFY 62
Query: 71 EANRG 75
+ +G
Sbjct: 63 GSIQG 67
Score = 34.3 bits (77), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 7 DKADRERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
DK + ++K D++GDGK++ E+ E+V + + + D +GDG I+ +EF
Sbjct: 73 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI---EKVAEQVMKADANGDGYITLEEF 129
Query: 67 TAFA 70
F+
Sbjct: 130 LEFS 133
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 49 MMAEIDTDGDGVISYDEFTAFAEANRGLIKN 79
+ EID +GDG +SY+E AF R IKN
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRA-IKN 34
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 39.7 bits (91), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFA 70
E F+ FD N DG I EL + L A V++E+++ +M + D + DG I +DEF
Sbjct: 99 EDCFRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMM 158
Query: 71 EA 72
E
Sbjct: 159 EG 160
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
F FD +G G IS EL + L + + EE+ ++ E+D DG G I ++EF
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|3LI6|A Chain A, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|D Chain D, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|G Chain G, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
pdb|3LI6|J Chain J, Crystal Structure And Trimer-Monomer Transition Of
N-Terminal Domain Of Ehcabp1 From Entamoeba Histolytica
Length = 66
Score = 39.7 bits (91), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMM-AEIDTDGDGVISYDEFTAF 69
E +FK D+NGDG +S E+ ++ ++ +E++ +++ ID DG+G I +EF F
Sbjct: 3 EALFKEIDVNGDGAVSYEEVKAFVSKKRAIKNEQLLQLIFKSIDADGNGEIDQNEFAKF 61
Score = 31.6 bits (70), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 49 MMAEIDTDGDGVISYDEFTAFAEANRGLIKN 79
+ EID +GDG +SY+E AF R IKN
Sbjct: 5 LFKEIDVNGDGAVSYEEVKAFVSKKRA-IKN 34
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 39.3 bits (90), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
F+ FD N DG I EL + L A V++E+++ +M + D + DG I +DEF E
Sbjct: 99 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 157
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
F FD +G G IS EL + L + + EE+ ++ E+D DG G I ++EF
Sbjct: 23 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 75
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
F+ FD N DG I EL + L A V++E+++ +M + D + DG I +DEF E
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
F FD +G G IS EL + L + + EE+ ++ E+D DG G I ++EF
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
F+ FD N DG I EL + L A V++E+++ +M + D + DG I +DEF E
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
F FD +G G IS EL + L + + EE+ ++ E+D DG G I ++EF
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 11 RERV---FKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFT 67
RER+ F++FD +G GKI+ EL L ++ V DE +++ E D + DG + ++EF
Sbjct: 122 RERLLAAFQQFDSDGSGKITNEELGR-LFGVTEVDDETWHQVLQECDKNNDGEVDFEEFV 180
Query: 68 AFAE 71
+
Sbjct: 181 EMMQ 184
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 13 RVFKRFDLNGDGKISASELADCLNAL------------SSVSDEEVKKMMAEIDTDGDGV 60
++F++ D NGDG++ EL + L SS + EV ++ +D D +G
Sbjct: 44 QIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGY 103
Query: 61 ISYDEFTA 68
I Y EF
Sbjct: 104 IEYSEFVT 111
Score = 27.3 bits (59), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 3 DEEQDKADRERVFKRFDLNGDGKISASELAD-CLNALSSVSDEEVKKMMAEIDTDGDGVI 61
D Q +A+ + + + D + +G I SE C++ +S E + + D+DG G I
Sbjct: 81 DSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKI 140
Query: 62 SYDEF 66
+ +E
Sbjct: 141 TNEEL 145
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 39.3 bits (90), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 37/73 (50%), Gaps = 1/73 (1%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSSVS-DEEVKKMMAEIDTDGDGVISYDEFTAFA 70
E VF+ FD NGDG I E L+ S ++++K + D DG+G IS E
Sbjct: 66 EHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIV 125
Query: 71 EANRGLIKNVAKI 83
+A ++ +V K+
Sbjct: 126 QAIYKMVSSVMKM 138
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/77 (24%), Positives = 42/77 (54%), Gaps = 13/77 (16%)
Query: 15 FKRFDLNGDGKISASELADCLNAL-------------SSVSDEEVKKMMAEIDTDGDGVI 61
F +DL+G+G IS +E+ + + A+ S ++ +K+ ++DT+ DG +
Sbjct: 105 FSMYDLDGNGYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKL 164
Query: 62 SYDEFTAFAEANRGLIK 78
S +EF A+++ +++
Sbjct: 165 SLEEFIRGAKSDPSIVR 181
Score = 26.2 bits (56), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 3 DEEQDKADRERVFKRFDLNGDGKISASEL 31
DE + E++F++ D N DGK+S E
Sbjct: 141 DESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 13 RVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTA 68
R F+ FD + GKIS L L +++DEE++ + E D DGDG I+ +EF A
Sbjct: 100 RAFQLFDDDHTGKISIKNLRRVAKELGETLTDEELRAXIEEFDLDGDGEINENEFIA 156
Score = 30.0 bits (66), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 30/63 (47%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISY 63
E+ K + F FD N DG + EL AL + E+ ++ E D++G + Y
Sbjct: 19 EEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYDSEGRHLXKY 78
Query: 64 DEF 66
D+F
Sbjct: 79 DDF 81
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 38.9 bits (89), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 11 RERV---FKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFT 67
RER+ F++FD +G GKI+ EL L ++ V DE +++ E D + DG + ++EF
Sbjct: 396 RERLLAAFQQFDSDGSGKITNEELGR-LFGVTEVDDETWHQVLQECDKNNDGEVDFEEFV 454
Score = 33.9 bits (76), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 12/68 (17%)
Query: 13 RVFKRFDLNGDGKISASELADCLNAL------------SSVSDEEVKKMMAEIDTDGDGV 60
++F++ D NGDG++ EL + L SS + EV ++ +D D +G
Sbjct: 318 QIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGY 377
Query: 61 ISYDEFTA 68
I Y EF
Sbjct: 378 IEYSEFVT 385
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 32/65 (49%), Gaps = 1/65 (1%)
Query: 3 DEEQDKADRERVFKRFDLNGDGKISASELAD-CLNALSSVSDEEVKKMMAEIDTDGDGVI 61
D Q +A+ + + + D + +G I SE C++ +S E + + D+DG G I
Sbjct: 355 DSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERLLAAFQQFDSDGSGKI 414
Query: 62 SYDEF 66
+ +E
Sbjct: 415 TNEEL 419
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 33/64 (51%), Gaps = 4/64 (6%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDE 65
D ++VF D + DG I EL L SS +S +E K +MA D DGDG I +E
Sbjct: 42 DVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 66 FTAF 69
F+
Sbjct: 102 FSTL 105
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 38.9 bits (89), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Query: 15 FKRFDLNGDGKISASELADCL---NALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
FK FD++G+GKIS EL + + + D+ + ++ E+D +GDG I + EF
Sbjct: 135 FKFFDIDGNGKISVEELKRIFGRDDIENPLIDKAIDSLLQEVDLNGDGEIDFHEF 189
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 4 EEQDKADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKM--MAEIDTDGDGV 60
E+ AD FK FD G G IS +EL L+ L +SDEEV ++ + ++ D +G
Sbjct: 80 EQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGN 139
Query: 61 ISYDEFT 67
+ Y+EF
Sbjct: 140 VKYEEFV 146
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain
(T94-Y172) Of The Human Centrin 2 In Complex With A
Repeat Sequence Of Human Sfi1 (R641-T660)
Length = 79
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 13 RVFKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
+ FK FD + GKIS L L +++DEE+++M+ E D DGDG +S EF
Sbjct: 15 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 69
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCL-NALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
F+ D G+G I +EL L N +++ EV+++M E+ GDG I+Y+ F
Sbjct: 82 FRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVSGDGAINYESF 134
Score = 25.0 bits (53), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 16/27 (59%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNAL 38
+ F+ FD + DGK+S EL L +L
Sbjct: 8 QECFQIFDKDNDGKVSIEELGSALRSL 34
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 1/68 (1%)
Query: 2 ADEEQDKADRERVFKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGV 60
+ EQ + + F+ +D G+G IS + + L L ++S E++ M+ EID DG G
Sbjct: 84 VNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGT 143
Query: 61 ISYDEFTA 68
+ ++EF
Sbjct: 144 VDFEEFMG 151
Score = 25.4 bits (54), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 12 ERVFKRFDL-NGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
E F+ F+ G G++S ++ L L + +++++ E D G+G I +D F
Sbjct: 16 ETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGDIDFDSF 72
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 4 EEQDKADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKM--MAEIDTDGDGV 60
E+ AD FK FD G G IS +EL L+ L +SDEEV ++ + ++ D +G
Sbjct: 79 EQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGN 138
Query: 61 ISYDEFT 67
+ Y+EF
Sbjct: 139 VKYEEFV 145
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain
Of Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr,
40 Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle,
Nmr, Minimized Average Structure
Length = 90
Score = 38.5 bits (88), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
F FD +G G IS EL + L + + EE+ ++ E+D DG G I ++EF
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal
Muscle Troponin-C
Length = 76
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 9 ADRERVFKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
A+ + F FD +G G IS EL + L + + EE+ ++ E+D DG G I ++EF
Sbjct: 9 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 67
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 1 MADEEQDKADRER--VFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDG 57
M D+ + K++ E +F+ D N DG I EL L A ++++++++++M + D +
Sbjct: 85 MKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 58 DGVISYDEFTAF 69
DG I YDEF F
Sbjct: 145 DGRIDYDEFLEF 156
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 23 DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
DG IS EL + L + + EE+++M+ E+D DG G + +DEF
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 1 MADEEQDKADRER--VFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDG 57
M D+ + K++ E +F+ FD N DG I EL L A ++++++++++M + D +
Sbjct: 85 MKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNN 144
Query: 58 DGVISYDEFTAF 69
DG I YDE F
Sbjct: 145 DGRIDYDEXLEF 156
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 23 DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
DG IS EL + L + + EE+++M+ E+D DG G + +DEF
Sbjct: 33 DGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr,
30 Structures
Length = 89
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 5 EQDKADRERVFKRFDLNG-DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVIS 62
E+ K + + F F L DG IS EL + L + + EE+++M+ E+D DG G +
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 63 YDEF 66
+DEF
Sbjct: 74 FDEF 77
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
F+ FD N DG I EL + L A V +E+++ +M + D + DG I +DEF E
Sbjct: 16 FRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 74
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
F FD +G G IS EL + L + + EE+ ++ E+D DG G I ++EF
Sbjct: 26 FDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
Score = 37.7 bits (86), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
F+ FD N DG I EL + L A V +E+++ +M + D + DG I +DEF E
Sbjct: 102 FRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 160
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 5 EQDKADRERVFKRFDLNG-DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVIS 62
E+ K + + F F L DG IS EL + L + + EE+++M+ E+D DG G +
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 63 YDEF 66
+DEF
Sbjct: 74 FDEF 77
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 38.1 bits (87), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 13 RVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
+ FK FD + GKIS L L +++DEE+++M+ E D DGDG +S EF
Sbjct: 25 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEF 79
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 5 EQDKADRERVFKRFDLNG-DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVIS 62
E+ K + + F F L DG IS EL + L + + EE+++M+ E+D DG G +
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 63 YDEF 66
+DEF
Sbjct: 74 FDEF 77
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISY 63
E+ K + + F FD N G I EL + AL V E+ ++M E D +G+G I +
Sbjct: 3 EEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGF 62
Query: 64 DEF 66
D+F
Sbjct: 63 DDF 65
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 37.7 bits (86), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 9 ADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKM--MAEIDTDGDGVISYDE 65
AD FK FD G G IS +EL L+ L +SDEEV ++ + ++ D +G + Y+E
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEEVDEIINLTDLQEDLEGNVKYEE 143
Query: 66 FT 67
F
Sbjct: 144 FV 145
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%), Gaps = 6/59 (10%)
Query: 15 FKRFDLNGDGKISASELADCL---NALSSVSDEEV---KKMMAEIDTDGDGVISYDEFT 67
F+ FD++ DG+I+ +ELA L N +++ +V K+M+ ++D + DG I + EF+
Sbjct: 128 FRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKRMIRDVDKNNDGKIDFHEFS 186
Score = 26.9 bits (58), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 29/67 (43%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEAN 73
F D +G G I+ +L L ++ +ID+DG G I Y EF A A
Sbjct: 57 TFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDSDGSGKIDYTEFIAAALDR 116
Query: 74 RGLIKNV 80
+ L K +
Sbjct: 117 KQLSKKL 123
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSV--SDEEVK----KMMAEIDTDGDGVISYDEFTA 68
F+ +DL+ D KIS EL L + V SDE++ + + E D DGD IS+ EF
Sbjct: 119 FRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVK 178
Query: 69 FAE 71
E
Sbjct: 179 VLE 181
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 37.4 bits (85), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 33/63 (52%), Gaps = 6/63 (9%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSV--SDEEVK----KMMAEIDTDGDGVISYDEFTA 68
F+ +DL+ D KIS EL L + V SDE++ + + E D DGD IS+ EF
Sbjct: 119 FRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFVK 178
Query: 69 FAE 71
E
Sbjct: 179 VLE 181
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac
Troponin-I(147- 163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain
Of Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 5 EQDKADRERVFKRFDLNG-DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVIS 62
E+ K + + F F L DG IS EL + L + + EE+++M+ E+D DG G +
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 63 YDEF 66
+DEF
Sbjct: 74 FDEF 77
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal
Domain Of Akazara Scallop Troponin C In Complex With A
Troponin I Fragment
Length = 74
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 4 EEQDKADRERVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVIS 62
E+ D+ + + F+ D G I L L +L ++++E++ M+AE DTDG G +
Sbjct: 2 EDLDERELKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVD 61
Query: 63 YDEFTAF 69
Y+EF
Sbjct: 62 YEEFKCL 68
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 37.0 bits (84), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDE 65
D ++VF D + G I EL L SS +S +E K +MA D DGDG I +E
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 66 FTAF 69
F+
Sbjct: 102 FSTL 105
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDE 65
D ++VF D + G I EL L SS +S +E K +MA D DGDG I +E
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 101
Query: 66 FTAF 69
F+
Sbjct: 102 FSTL 105
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 23 DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
DG IS EL + L + + EE+++M+ E+D DG G + +DEF
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 23 DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
DG IS EL + L + + EE+++M+ E+D DG G + +DEF
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 36.6 bits (83), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDE 65
D ++VF D + G I EL L SS +S +E K +MA D DGDG I +E
Sbjct: 6 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIGVEE 65
Query: 66 FTAF 69
F+
Sbjct: 66 FSTL 69
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin
C At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 23 DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
DG IS EL + L + + EE+++M+ E+D DG G + +DEF
Sbjct: 33 DGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEF 77
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 36.6 bits (83), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEFTA 68
F+ +D G+G IS + + L L ++S E++ M+ EID DG G + ++EF
Sbjct: 9 FRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMG 63
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDE 65
D ++VF D + G I EL L S +S +E K +MA D DGDG I DE
Sbjct: 43 DVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKETKMLMAAGDKDGDGKIGVDE 102
Query: 66 FTAF 69
F+
Sbjct: 103 FSTL 106
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 36.2 bits (82), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
F FD +G G IS L + L + + EE+ ++ E+D DG G I ++EF
Sbjct: 26 FDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEF 78
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 13 RVFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
+ FK FD + GKIS L L +++DEE+++ + E D DGDG +S EF
Sbjct: 108 KAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEXIDEADRDGDGEVSEQEF 162
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 8 KADRER----VFKRFDLNGDGKISASELADCLNAL--SSVSDEEVK----KMMAEIDTDG 57
K D+E+ F+ +D++ DG IS EL L + +++ D +++ K + D DG
Sbjct: 85 KGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDG 144
Query: 58 DGVISYDEFTA 68
DG IS++EF A
Sbjct: 145 DGRISFEEFCA 155
Score = 28.1 bits (61), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
FK+ DL+ G +S E L L + V++++ DTDG+G + + EF
Sbjct: 27 FKKLDLDNSGSLSVEEFM-SLPELQQ--NPLVQRVIDIFDTDGNGEVDFKEF 75
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 4 EEQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMA--EIDTDGDGVI 61
E Q +RV FD +G+G++ E + ++ S D+E K A D D DG I
Sbjct: 48 ELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYI 107
Query: 62 SYDEF 66
S E
Sbjct: 108 SNGEL 112
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 8 KADRER----VFKRFDLNGDGKISASELADCLNAL--SSVSDEEVK----KMMAEIDTDG 57
K D+E+ F+ +D++ DG IS EL L + +++ D +++ K + D DG
Sbjct: 84 KGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDG 143
Query: 58 DGVISYDEFTA 68
DG IS++EF A
Sbjct: 144 DGRISFEEFCA 154
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
FK+ DL+ G +S E L L + V++++ DTDG+G + + EF
Sbjct: 26 FKKLDLDNSGSLSVEEFM-SLPELQQ--NPLVQRVIDIFDTDGNGEVDFKEF 74
Score = 26.6 bits (57), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 4 EEQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMA--EIDTDGDGVI 61
E Q +RV FD +G+G++ E + ++ S D+E K A D D DG I
Sbjct: 47 ELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYI 106
Query: 62 SYDEF 66
S E
Sbjct: 107 SNGEL 111
>pdb|1NYA|A Chain A, Nmr Solution Structure Of Calerythrin, An Ef-hand Calcium-
Binding Protein
Length = 176
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 19 DLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
D N DG+I+A E A L AL +S E + ++DT+G+G +S DE
Sbjct: 112 DKNADGQINADEFAAWLTAL-GMSKAEAAEAFNQVDTNGNGELSLDEL 158
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 9 ADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKM--MAEIDTDGDGVISYDE 65
AD FK FD G G IS +EL L AL +SDE+V ++ + ++ D +G + Y++
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYED 143
Query: 66 FT 67
F
Sbjct: 144 FV 145
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 9 ADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKM--MAEIDTDGDGVISYDE 65
AD FK FD G G IS +EL L AL +SDE+V ++ + ++ D +G + Y++
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYED 143
Query: 66 FT 67
F
Sbjct: 144 FV 145
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 9 ADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKM--MAEIDTDGDGVISYDE 65
AD FK FD G G IS +EL L AL +SDE+V ++ + ++ D +G + Y++
Sbjct: 82 ADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYED 141
Query: 66 FT 67
F
Sbjct: 142 FV 143
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 8 KADRER----VFKRFDLNGDGKISASELADCLNAL--SSVSDEEVK----KMMAEIDTDG 57
K D+E+ F+ +D++ DG IS EL L + +++ D +++ K + D DG
Sbjct: 70 KGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDG 129
Query: 58 DGVISYDEFTA 68
DG IS++EF A
Sbjct: 130 DGRISFEEFCA 140
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
FK+ DL+ G +S E L L + V++++ DTDG+G + + EF
Sbjct: 12 FKKLDLDNSGSLSVEEFM-SLPELQQ--NPLVQRVIDIFDTDGNGEVDFKEF 60
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 4 EEQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMA--EIDTDGDGVI 61
E Q +RV FD +G+G++ E + ++ S D+E K A D D DG I
Sbjct: 33 ELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYI 92
Query: 62 SYDEF 66
S E
Sbjct: 93 SNGEL 97
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 10/71 (14%)
Query: 8 KADRER----VFKRFDLNGDGKISASELADCLNAL--SSVSDEEVK----KMMAEIDTDG 57
K D+E+ F+ +D++ DG IS EL L + +++ D +++ K + D DG
Sbjct: 71 KGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNLKDTQLQQIVDKTIINADKDG 130
Query: 58 DGVISYDEFTA 68
DG IS++EF A
Sbjct: 131 DGRISFEEFCA 141
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 28/52 (53%), Gaps = 3/52 (5%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
FK+ DL+ G +S E L L + V++++ DTDG+G + + EF
Sbjct: 13 FKKLDLDNSGSLSVEEFM-SLPELQQ--NPLVQRVIDIFDTDGNGEVDFKEF 61
Score = 26.6 bits (57), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 2/65 (3%)
Query: 4 EEQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMA--EIDTDGDGVI 61
E Q +RV FD +G+G++ E + ++ S D+E K A D D DG I
Sbjct: 34 ELQQNPLVQRVIDIFDTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYI 93
Query: 62 SYDEF 66
S E
Sbjct: 94 SNGEL 98
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 9 ADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKM--MAEIDTDGDGVISYDE 65
AD FK FD G G IS +EL L AL +SDE+V ++ + ++ D +G + Y++
Sbjct: 84 ADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYED 143
Query: 66 FT 67
F
Sbjct: 144 FV 145
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 1/61 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEANR 74
F FD +G G I+ E+ + D + M+ EID D DG I Y EF A +
Sbjct: 88 FSYFDKDGSGYITLDEIQQACKDFG-LDDIHIDDMIKEIDQDNDGQIDYGEFAAMMRKRK 146
Query: 75 G 75
G
Sbjct: 147 G 147
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDGVISYDEFTA 68
+FK D + G I+ EL D L + S + + E+K +M D D G I Y EF A
Sbjct: 15 LFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIA 70
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 35.8 bits (81), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 9 ADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKM--MAEIDTDGDGVISYDE 65
AD FK FD G G IS +EL L AL +SDE+V ++ + ++ D +G + Y++
Sbjct: 81 ADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYED 140
Query: 66 FT 67
F
Sbjct: 141 FV 142
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 35.8 bits (81), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 9 ADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKM--MAEIDTDGDGVISYDE 65
AD FK FD G G IS +EL L AL +SDE+V ++ + ++ D +G + Y++
Sbjct: 81 ADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEIIKLTDLQEDLEGNVKYED 140
Query: 66 FT 67
F
Sbjct: 141 FV 142
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 35.4 bits (80), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 31/61 (50%), Gaps = 4/61 (6%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDE 65
D ++VFK D + G I EL L + ++ ++D E K + D DGDG I DE
Sbjct: 43 DVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLTDAETKAFLKAADKDGDGKIGIDE 102
Query: 66 F 66
F
Sbjct: 103 F 103
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 9 ADRERVFKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
A+ + F FD +G G IS EL + L + + E+ ++ E+D DG G I ++EF
Sbjct: 20 AEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEF 78
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 35.4 bits (80), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 5 EQDKADRERVFKRFDLNG-DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVIS 62
E+ K + + F F L DG IS EL + L + + EE+++M+ E+D DG G +
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 63 YDEF 66
+DE+
Sbjct: 74 FDEW 77
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 5 EQDKADRERVFKRFDLNG-DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVIS 62
E+ K + + F F L DG IS EL + L + + EE+++M+ E+D DG G +
Sbjct: 14 EEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 63 YDEF 66
+DE+
Sbjct: 74 FDEW 77
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 35.4 bits (80), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 28/54 (51%), Gaps = 1/54 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTA 68
F FD +G G I+ EL V D ++++ ++D D DG I Y+EF A
Sbjct: 105 FTYFDKDGSGYITPDELQQACEEFG-VEDVRIEELXRDVDQDNDGRIDYNEFVA 157
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISY 63
E++ A + F D + G+I+ EL L + +++ + E+ + D D G I Y
Sbjct: 23 EEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTIDY 82
Query: 64 DEFTA 68
EF A
Sbjct: 83 KEFIA 87
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 35.0 bits (79), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 46/88 (52%), Gaps = 7/88 (7%)
Query: 4 EEQDKADRERVFKRFDLNGDGKISASELAD------CLNALSSVSDEE-VKKMMAEIDTD 56
+E+ + + FK +D +G+G I +EL D LN ++S EE + + +ID +
Sbjct: 88 QEKMEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQTLSPEEFINLVFHKIDIN 147
Query: 57 GDGVISYDEFTAFAEANRGLIKNVAKIF 84
DG ++ +EF ++ L++ V K F
Sbjct: 148 NDGELTLEEFINGMAKDQDLLEIVYKSF 175
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 35.0 bits (79), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 1/71 (1%)
Query: 14 VFKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
VF FD N DG+I SE L+ S DE+++ D D DG I+ +E +A
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIVDA 127
Query: 73 NRGLIKNVAKI 83
++ N ++
Sbjct: 128 IYQMVGNTVEL 138
Score = 33.5 bits (75), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 43/80 (53%), Gaps = 13/80 (16%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSV-------------SDEEVKKMMAEIDTDGDGVI 61
FK +DL+ DG I+ +E+ D ++A+ + ++ V ++ A +D + DG +
Sbjct: 105 FKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKL 164
Query: 62 SYDEFTAFAEANRGLIKNVA 81
+ EF ++A+ +++ ++
Sbjct: 165 TLQEFQEGSKADPSIVQALS 184
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNALS----SVSDEEVKKMMAEIDTDGDGVISYDE 65
D ++ F D + G I EL L S +++D E K +A+ D DGDG+I DE
Sbjct: 42 DVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIGVDE 101
Query: 66 FTAFAEA 72
F A +A
Sbjct: 102 FAAMIKA 108
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 34.7 bits (78), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
F+ FD G+GK+ +EL L L +++EEV+ ++A + D +G I+Y+ F
Sbjct: 93 FRVFDKEGNGKVMGAELRHVLTTLGEKMTEEEVETVLAGHE-DSNGCINYEAF 144
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium
Regulatory Domain (Cld) From Soybean Calcium-Dependent
Protein Kinase- Alpha (Cdpk)
Length = 87
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDGVISYDEFTA 68
+FK D + G I+ EL D L + S + + E+K +M D D G I Y EF A
Sbjct: 28 LFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIA 83
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 34.3 bits (77), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 4/64 (6%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDE 65
D ++VF D + G I EL L SS +S +E K +MA D DG G I +E
Sbjct: 42 DVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGSGKIEVEE 101
Query: 66 FTAF 69
F+
Sbjct: 102 FSTL 105
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 8 KADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDGVISYDE 65
KA + VF+ FD N DG + E L+ S+ ++++++ + D DG+G IS +E
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 34.3 bits (77), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 8 KADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDGVISYDE 65
KA + VF+ FD N DG + E L+ S+ ++++++ + D DG+G IS +E
Sbjct: 63 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 121
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 7 DKADRERVFKRFDLNGDGKISASELADCLNALSSVSDEEV-KKMMAEIDTDGDGVISYDE 65
D+A+ E V +++D NG G + E L S + E V A++D GDGV++ D+
Sbjct: 71 DQAEAEGVCRKWDRNGSGTLDLEEFLRALRPPMSQAREAVIAAAFAKLDRSGDGVVTVDD 130
Query: 66 F 66
Sbjct: 131 L 131
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 4 EEQDKADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDGVIS 62
E KA + VF+ FD N DG + E L+ S+ ++++++ + D DG+G IS
Sbjct: 58 EADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTIS 117
Query: 63 YDE 65
+E
Sbjct: 118 KNE 120
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 33.9 bits (76), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 8 KADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDGVISYDE 65
KA + VF+ FD N DG + E L+ S+ ++++++ + D DG+G IS +E
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 33.9 bits (76), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 7 DKADRERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
DK + ++K D++GDGK++ E+ E+V + + + D +GDG I+ +EF
Sbjct: 3 DKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI---EKVAEQVMKADANGDGYITLEEF 59
Query: 67 TAFA 70
F+
Sbjct: 60 LEFS 63
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 33.5 bits (75), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEI---------DTDGDGVISYDE 65
FK +DL G I EL + + AL S+ + + M E+ D DG I DE
Sbjct: 117 FKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDE 176
Query: 66 FTAFAEANRGLIKNVA 81
+ F N LIKN+
Sbjct: 177 WKDFVSLNPSLIKNMT 192
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 33.5 bits (75), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 34/76 (44%), Gaps = 9/76 (11%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEI---------DTDGDGVISYDE 65
FK +DL G I EL + + AL S+ + + M E+ D DG I DE
Sbjct: 117 FKLYDLRQTGFIEREELKEMVVALLHESELVLSEDMIEVMVDKAFVQADRKNDGKIDIDE 176
Query: 66 FTAFAEANRGLIKNVA 81
+ F N LIKN+
Sbjct: 177 WKDFVSLNPSLIKNMT 192
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 33.1 bits (74), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 8 KADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDGVISYDE 65
KA + VF+ FD N DG + + L+ S+ ++++++ + D DG+G IS +E
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 33.1 bits (74), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 8 KADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDGVISYDE 65
KA + VF+ FD N DG + + L+ S+ ++++++ + D DG+G IS +E
Sbjct: 62 KAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQKLEWAFSLYDVDGNGTISKNE 120
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 32.7 bits (73), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 8/60 (13%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSV-------SDEEVKKMMA-EIDTDGDGVISYDEF 66
FK +D++G+G I EL + + A+ ++ + EE M+ +ID +GDG +S +EF
Sbjct: 94 FKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAMTAEEFTNMVFDKIDINGDGELSLEEF 153
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 32.7 bits (73), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 19 DLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF-TAFA 70
D +GDG ++ ++ A L A V ++ ++ A +DTDGDG + E AFA
Sbjct: 108 DTDGDGAVTVADTARALTAFG-VPEDLARQAAAALDTDGDGKVGETEIVPAFA 159
>pdb|3AKB|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 32.7 bits (73), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 19 DLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF-TAFA 70
D +GDG ++ ++ A L A V ++ ++ A +DTDGDG + E AFA
Sbjct: 108 DTDGDGAVTVADTARALTAFG-VPEDLARQAAAALDTDGDGKVGETEIVPAFA 159
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 32.7 bits (73), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/79 (21%), Positives = 38/79 (48%), Gaps = 13/79 (16%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSV-------------SDEEVKKMMAEIDTDGDGVI 61
F +D+N DG I+ E+ D + A+ + + V+ ++D + DGV+
Sbjct: 144 FNLYDINKDGYITKEEMLDIMKAIYDMMGKCTYPVLKEDAPRQHVETFFQKMDKNKDGVV 203
Query: 62 SYDEFTAFAEANRGLIKNV 80
+ DEF + + +++++
Sbjct: 204 TIDEFIESCQKDENIMRSM 222
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 32.7 bits (73), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%), Gaps = 1/45 (2%)
Query: 23 DGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
DG IS EL L + + EE+++ + E+D DG G + +DEF
Sbjct: 33 DGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEF 77
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of
Chick Smooth Muscle Myosin With Regulatory Light Chain
In Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of
Chick Smooth Muscle Myosin With Regulatory Light Chain
In Phosphorylated State
Length = 148
Score = 32.3 bits (72), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTD 56
E+ A+ + F+ FD GDGKI S+ D + AL + ++ EV K++ +D
Sbjct: 3 EEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSD 55
Score = 28.9 bits (63), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFT 67
+ FD G+G + +E+ L L +++EEV++++A + D +G I+Y+E
Sbjct: 90 LRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGHE-DSNGCINYEELV 142
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C
Alphas Provided For Regulatory Light Chain. Only
Backbone Atoms Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking
To Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking
To Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 32.3 bits (72), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTD 56
E+ A+ + F+ FD GDGKI S+ D + AL + ++ EV K++ +D
Sbjct: 5 EEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSD 57
Score = 28.9 bits (63), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 32/54 (59%), Gaps = 2/54 (3%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFT 67
+ FD G+G + +E+ L L +++EEV++++A + D +G I+Y+E
Sbjct: 92 LRVFDKEGNGTVMGAEIRHVLVTLGEKMTEEEVEQLVAGHE-DSNGCINYEELV 144
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 32.3 bits (72), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 34/65 (52%), Gaps = 13/65 (20%)
Query: 14 VFKRFDLNGDGKIS--------ASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDE 65
+F+++D GDG++S +E L +S++ + + E+D +GDG +S++E
Sbjct: 10 IFEKYDKEGDGQLSKEELKLLLQTEFPSLLKGMSTLDE-----LFEELDKNGDGEVSFEE 64
Query: 66 FTAFA 70
F
Sbjct: 65 FQVLV 69
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 32.3 bits (72), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDE 65
D ++ F D + G I EL L + ++D E K + D+DGDG I DE
Sbjct: 43 DVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDE 102
Query: 66 FTAFAEA 72
FTA +A
Sbjct: 103 FTALVKA 109
Score = 25.8 bits (55), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 37 ALSSVSDEEVKKMMAEIDTDGDGVISYDEFTAFAE 71
L+S S ++VKK A ID D G I DE F +
Sbjct: 35 GLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQ 69
>pdb|1CFP|A Chain A, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|1CFP|B Chain B, S100b (S100beta) Nmr Data Was Collected From A Sample Of
Calcium Free Protein At Ph 6.3 And A Temperature Of 311
K And 1.7-6.9 Mm Concentration, 25 Structures
pdb|3CR2|A Chain A, X-ray Structure Of Bovine Zn(2+),ca(2+)-s100b
pdb|3CR5|X Chain X, X-Ray Structure Of Bovine Pnt-Zn(2+),Ca(2+)-S100b
pdb|3CR4|X Chain X, X-Ray Structure Of Bovine Pnt,Ca(2+)-S100b
pdb|3GK1|A Chain A, X-Ray Structure Of Bovine Sbi132,Ca(2+)-S100b
pdb|3GK2|A Chain A, X-Ray Structure Of Bovine Sbi279,Ca(2+)-S100b
pdb|3GK4|X Chain X, X-Ray Structure Of Bovine Sbi523,Ca(2+)-S100b
pdb|3IQO|A Chain A, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQO|B Chain B, 1.5 Angstrom X-ray Structure Of Bovine Ca(2+)-s100b
pdb|3IQQ|A Chain A, X-Ray Structure Of Bovine Trtk12-Ca(2+)-S100b
pdb|3LLE|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
pdb|3LLE|B Chain B, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 92
Score = 32.3 bits (72), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 25 KISASELADCLNALSSVSDEEVK------KMMAEIDTDGDGVISYDEFTAFA 70
K+ SEL + +N S EE+K K+M +D+DGDG + EF AF
Sbjct: 27 KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFV 78
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDEFT 67
++VF D + G I EL L SS ++ E K +A DTDGDG I +EF
Sbjct: 44 KKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQ 103
Query: 68 AFAEA 72
+ +A
Sbjct: 104 SLVKA 108
>pdb|1PSB|A Chain A, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase.
pdb|1PSB|B Chain B, Solution Structure Of Calcium Loaded S100b Complexed To
A Peptide From N-Terminal Regulatory Domain Of Ndr
Kinase
Length = 91
Score = 32.3 bits (72), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 25 KISASELADCLNALSSVSDEEVK------KMMAEIDTDGDGVISYDEFTAFA 70
K+ SEL + +N S EE+K K+M +D+DGDG + EF AF
Sbjct: 26 KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFV 77
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 32.3 bits (72), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDEFT 67
++VF D + G I EL L SS ++ E K +A DTDGDG I +EF
Sbjct: 45 KKVFGILDQDKSGFIEEEELQLFLKNFSSSARVLTSAETKAFLAAGDTDGDGKIGVEEFQ 104
Query: 68 AFAEA 72
+ +A
Sbjct: 105 SLVKA 109
>pdb|1MHO|A Chain A, The 2.0 A Structure Of Holo S100b From Bovine Brain
Length = 88
Score = 32.0 bits (71), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 25 KISASELADCLNALSSVSDEEVK------KMMAEIDTDGDGVISYDEFTAFA 70
K+ SEL + +N S EE+K K+M +D+DGDG + EF AF
Sbjct: 26 KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFV 77
>pdb|3LK0|A Chain A, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|B Chain B, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|C Chain C, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK0|D Chain D, X-Ray Structure Of Bovine Sc0067,Ca(2+)-S100b
pdb|3LK1|A Chain A, X-Ray Structure Of Bovine Sc0322,Ca(2+)-S100b
Length = 90
Score = 32.0 bits (71), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 25 KISASELADCLNALSSVSDEEVK------KMMAEIDTDGDGVISYDEFTAFA 70
K+ SEL + +N S EE+K K+M +D+DGDG + EF AF
Sbjct: 27 KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFV 78
>pdb|4FQO|A Chain A, Crystal Structure Of Calcium-loaded S100b Bound To
Sbi4211
Length = 89
Score = 32.0 bits (71), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 25 KISASELADCLNALSSVSDEEVK------KMMAEIDTDGDGVISYDEFTAFA 70
K+ SEL + +N S EE+K K+M +D+DGDG + EF AF
Sbjct: 27 KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFV 78
>pdb|2H61|A Chain A, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|B Chain B, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|E Chain E, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|F Chain F, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|H Chain H, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3CZT|X Chain X, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 9
pdb|3D0Y|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 6.5
pdb|3D10|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 10.0
pdb|3D10|B Chain B, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 10.0
pdb|3HCM|A Chain A, Crystal Structure Of Human S100b In Complex With S45
pdb|3HCM|B Chain B, Crystal Structure Of Human S100b In Complex With S45
Length = 92
Score = 32.0 bits (71), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 25 KISASELADCLNALSSVSDEEVK------KMMAEIDTDGDGVISYDEFTAFA 70
K+ SEL + +N S EE+K K+M +D DGDG + EF AF
Sbjct: 27 KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQEFMAFV 78
>pdb|1MQ1|A Chain A, Ca2+-S100b-Trtk-12 Complex
pdb|1MQ1|B Chain B, Ca2+-S100b-Trtk-12 Complex
pdb|1UWO|A Chain A, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|1UWO|B Chain B, Calcium Form Of Human S100b, Nmr, 20 Structures
pdb|2PRU|A Chain A, Nmr Structure Of Human Apos100b At 10c
pdb|2PRU|B Chain B, Nmr Structure Of Human Apos100b At 10c
Length = 91
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 25 KISASELADCLNALSSVSDEEVK------KMMAEIDTDGDGVISYDEFTAFA 70
K+ SEL + +N S EE+K K+M +D DGDG + EF AF
Sbjct: 26 KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQEFMAFV 77
>pdb|2H61|C Chain C, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|D Chain D, X-ray Structure Of Human Ca2+-loaded S100b
pdb|2H61|G Chain G, X-ray Structure Of Human Ca2+-loaded S100b
pdb|3D0Y|A Chain A, Crystal Structure Of S100b In The Calcium And Zinc
Loaded State At Ph 6.5
Length = 92
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 25 KISASELADCLNALSSVSDEEVK------KMMAEIDTDGDGVISYDEFTAFA 70
K+ SEL + +N S EE+K K+M +D DGDG + EF AF
Sbjct: 27 KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDNDGDGECDFQEFMAFV 78
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 32.0 bits (71), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 31/62 (50%), Gaps = 4/62 (6%)
Query: 9 ADRERVFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYD 64
A + VF+ D + G I EL L S+ ++D E K ++A D+D DG I D
Sbjct: 41 AQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLNDTETKALLAAGDSDHDGKIGAD 100
Query: 65 EF 66
EF
Sbjct: 101 EF 102
>pdb|2G2B|A Chain A, Nmr Structure Of The Human Allograft Inflammatory Factor 1
Length = 150
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEAN 73
+ FDLNG+G I L L L + E+KK++ E+ + SY +F
Sbjct: 57 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 116
Query: 74 RGLI 77
R I
Sbjct: 117 RSAI 120
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 8 KADRERVFKRFDLNGDGKISASELADCLNALSS-VSDEEVKKMMAEIDTDGDGVISYDE 65
KA + VF+ FD N DG + E L+ ++ ++++++ + D DG+G IS +E
Sbjct: 70 KAYAQHVFRSFDSNLDGTLDFKEYVIALHXTTAGKTNQKLEWAFSLYDVDGNGTISKNE 128
>pdb|2D58|A Chain A, Human Microglia-Specific Protein Iba1
Length = 107
Score = 31.6 bits (70), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 1/64 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEAN 73
+ FDLNG+G I L L L + E+KK++ E+ + SY +F
Sbjct: 38 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKKLIGEVSSGSGETFSYPDFLRMMLGK 97
Query: 74 RGLI 77
R I
Sbjct: 98 RSAI 101
>pdb|1K2H|A Chain A, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1K2H|B Chain B, Three-Dimensional Solution Structure Of Apo-S100a1.
pdb|1ZFS|A Chain A, Solution Structure Of S100a1 Bound To Calcium
pdb|1ZFS|B Chain B, Solution Structure Of S100a1 Bound To Calcium
pdb|2K2F|A Chain A, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2K2F|B Chain B, Solution Structure Of Ca2+-S100a1-Ryrp12
pdb|2KBM|A Chain A, Ca-S100a1 Interacting With Trtk12
pdb|2KBM|B Chain B, Ca-S100a1 Interacting With Trtk12
Length = 93
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 25 KISASELADCLNA-LSSVSDEE-----VKKMMAEIDTDGDGVISYDEFTAFAEA 72
K+S EL D L LSS D + V K+M E+D +GDG + + EF A
Sbjct: 27 KLSKKELKDLLQTELSSFLDVQKDADAVDKIMKELDENGDGEVDFQEFVVLVAA 80
>pdb|1SYM|A Chain A, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1SYM|B Chain B, 3-D Solution Structure Of Reduced Apo-S100b From Rat,
Nmr, 20 Structures
pdb|1QLK|A Chain A, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1QLK|B Chain B, Solution Structure Of Ca(2+)-Loaded Rat S100b (Betabeta)
Nmr, 20 Structures
pdb|1B4C|A Chain A, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1B4C|B Chain B, Solution Structure Of Rat Apo-S100b Using Dipolar
Couplings
pdb|1DT7|A Chain A, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1DT7|B Chain B, Solution Structure Of The C-Terminal Negative Regulatory
Domain Of P53 In A Complex With Ca2+-Bound S100b(Bb)
pdb|1MWN|A Chain A, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1MWN|B Chain B, Solution Nmr Structure Of S100b Bound To The
High-Affinity Target Peptide Trtk-12
pdb|1XYD|A Chain A, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
pdb|1XYD|B Chain B, Nmr Solution Structure Of Rat Zinc-Calcium-S100b, 20
Structures
Length = 92
Score = 31.6 bits (70), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 25 KISASELADCLNALSSVSDEEVK------KMMAEIDTDGDGVISYDEFTAFA 70
K+ SEL + +N S EE+K K+M +D DGDG + EF AF
Sbjct: 27 KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDEDGDGECDFQEFMAFV 78
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISYDEFT 67
F+ FD + DG I+ +L +C+ + + E E+ ++ +I+ + G + +D+F
Sbjct: 16 FREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 69
>pdb|2K7O|A Chain A, Ca2+-s100b, Refined With Rdcs
pdb|2K7O|B Chain B, Ca2+-s100b, Refined With Rdcs
Length = 91
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 6/52 (11%)
Query: 25 KISASELADCLNALSSVSDEEVK------KMMAEIDTDGDGVISYDEFTAFA 70
K+ SEL + +N S EE+K K+M +D DGDG + EF AF
Sbjct: 26 KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDEDGDGECDFQEFMAFV 77
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDE 65
D ++ F D + G I EL L S+ ++D E K + D+DGDG I DE
Sbjct: 43 DIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALTDAETKAFLKAGDSDGDGAIGVDE 102
Query: 66 FTAFAEA 72
+ A +A
Sbjct: 103 WAALVKA 109
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 31.2 bits (69), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISYDEFTAFAEAN 73
+ FDLN +G+I L + L E+KKM++E+ ISY +F
Sbjct: 56 YMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK 115
Query: 74 RGLIKNVAKIF 84
R + + +F
Sbjct: 116 RSAVLKLVMMF 126
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 31.2 bits (69), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 1/71 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDE-EVKKMMAEIDTDGDGVISYDEFTAFAEAN 73
+ FDLN +G+I L + L E+KKM++E+ ISY +F
Sbjct: 56 YMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMISEVTGGVSDTISYRDFVNMMLGK 115
Query: 74 RGLIKNVAKIF 84
R + + +F
Sbjct: 116 RSAVLKLVMMF 126
>pdb|1WY9|A Chain A, Crystal Structure Of Microglia-Specific Protein, Iba1
Length = 147
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 29/64 (45%), Gaps = 1/64 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEAN 73
+ FDLNG+G I L L L + E+K+++ E+ + + SY +F
Sbjct: 54 YMEFDLNGNGDIDIMSLKRMLEKLGVPKTHLELKRLIREVSSGSEETFSYSDFLRMMLGK 113
Query: 74 RGLI 77
R I
Sbjct: 114 RSAI 117
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 31.2 bits (69), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 31/66 (46%), Gaps = 13/66 (19%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAE-------------IDTDGDGV 60
F +D+N DG I+ E+ D + A+ + ++AE +D + DG+
Sbjct: 94 TFNLYDINKDGYINKEEMMDIVKAIYDMMGAYTYPVLAEDTPRQHVDVFFQKMDKNKDGI 153
Query: 61 ISYDEF 66
++ DEF
Sbjct: 154 VTLDEF 159
>pdb|2LVV|A Chain A, Nmr Structure Of Tb24
Length = 226
Score = 31.2 bits (69), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 2/59 (3%)
Query: 14 VFKRFDLNGDGKISASELADCLNALS--SVSDEEVKKMMAEIDTDGDGVISYDEFTAFA 70
+F D +G + E + L L V + + EIDT+G GV+++DEF+ +A
Sbjct: 138 MFDTMDKDGSLLLELQEFKEALPKLKEWGVDITDATTVFNEIDTNGSGVVTFDEFSCWA 196
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 1/34 (2%)
Query: 6 QDKADRERVFKRFDLNGDGKISASELAD-CLNAL 38
+ K+ R +FK+FD NG GK+ E+ D C L
Sbjct: 48 ESKSRRIELFKQFDTNGTGKLGFREVLDGCYGIL 81
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 30.8 bits (68), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 4/67 (5%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDE 65
D ++ F D + G I EL L + ++D E K + D+DGDG I DE
Sbjct: 42 DVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARALTDGETKTFLKAGDSDGDGKIGVDE 101
Query: 66 FTAFAEA 72
+TA +A
Sbjct: 102 WTALVKA 108
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 15/35 (42%), Positives = 19/35 (54%)
Query: 37 ALSSVSDEEVKKMMAEIDTDGDGVISYDEFTAFAE 71
L+S S ++VKK A ID D G I DE F +
Sbjct: 34 GLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQ 68
>pdb|3RLZ|A Chain A, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RLZ|B Chain B, 2.0 Angstrom X-Ray Structure Of Bovine Ca(2+)-S100b D63n
pdb|3RM1|A Chain A, 1.24 Angstrom X-Ray Structure Of Bovine
Trtk12-Ca(2+)-S100b D63n
Length = 92
Score = 30.8 bits (68), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 6/52 (11%)
Query: 25 KISASELADCLNALSSVSDEEVK------KMMAEIDTDGDGVISYDEFTAFA 70
K+ SEL + +N S EE+K K+M +D++GDG + EF AF
Sbjct: 27 KLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSNGDGECDFQEFMAFV 78
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 30.8 bits (68), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDEF 66
VF+ D + G + EL L S +++ E K +MA D DGDG I +EF
Sbjct: 47 VFRFIDNDQSGYLDEEELKFFLQKFESGARELTESETKSLMAAADNDGDGKIGAEEF 103
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 30.4 bits (67), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 21/33 (63%)
Query: 40 SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
+++D E K + D+DGDG I DE+TA +A
Sbjct: 76 ALTDGETKTFLKAGDSDGDGKIGVDEWTALVKA 108
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 30.4 bits (67), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 13 RVFKRFDLNGDGKISASELADCLNAL-SSVSDEEVKKMMAEIDTDGDGVISYDEF 66
+ F+ FD + G I+ +L L ++++EE+++M+AE D + D I DEF
Sbjct: 13 KAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEF 67
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 30.4 bits (67), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 13/66 (19%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAE-------------IDTDGDGV 60
F +D+N DG I+ E+ D + A+ + + ++ E +D + DG+
Sbjct: 97 TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI 156
Query: 61 ISYDEF 66
++ DEF
Sbjct: 157 VTLDEF 162
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 30.4 bits (67), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 13/76 (17%)
Query: 15 FKRFDLNGDGKISASELAD-------------CLNALSSVSDEEVKKMMAEIDTDGDGVI 61
F+ +DLN DG I+ E+ LN + + VKK+ +D + DG I
Sbjct: 105 FELYDLNHDGYITFDEMLTIVASVYKMMGSMVTLNEDEATPEMRVKKIFKLMDKNEDGYI 164
Query: 62 SYDEFTAFAEANRGLI 77
+ DEF ++ + +I
Sbjct: 165 TLDEFREGSKVDPSII 180
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 30.0 bits (66), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 13/66 (19%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAE-------------IDTDGDGV 60
F +D+N DG I+ E+ D + A+ + + ++ E +D + DG+
Sbjct: 130 TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI 189
Query: 61 ISYDEF 66
++ DEF
Sbjct: 190 VTLDEF 195
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 30.0 bits (66), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 31/66 (46%), Gaps = 13/66 (19%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAE-------------IDTDGDGV 60
F +D+N DG I+ E+ D + A+ + + ++ E +D + DG+
Sbjct: 94 TFNLYDINKDGYINKEEMMDIVKAIYDMMGKYTYPVLKEDTPRQHVDVFFQKMDKNKDGI 153
Query: 61 ISYDEF 66
++ DEF
Sbjct: 154 VTLDEF 159
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 30.0 bits (66), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDEF 66
+F+ D + G + EL L S +++ E K +M D DGDG I DEF
Sbjct: 46 IFRFIDNDQSGYLDGDELKYFLQKFQSDARELTESETKSLMDAADNDGDGKIGADEF 102
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 29.6 bits (65), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 36/76 (47%), Gaps = 7/76 (9%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAE----IDTDGDGVISYDEFT 67
E VF FD + +G I E + ALS S E+ + D D +G+ISYDE
Sbjct: 66 EYVFNVFDADKNGYIDFKEF---ICALSVTSRGELNDKLIWAFQLYDLDNNGLISYDEML 122
Query: 68 AFAEANRGLIKNVAKI 83
+A ++ ++ K+
Sbjct: 123 RIVDAIYKMVGSMVKL 138
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 29.6 bits (65), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTA 68
+ ++K+FD++ G I +SEL A +E + M+ +D G + +D F +
Sbjct: 80 QAIYKQFDVDRSGTIGSSELPGAFEAAGFHLNEHLYSMIIRRYSDEGGNMDFDNFIS 136
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 12/66 (18%)
Query: 13 RVFKRF--DLNGDG-KISASELADCLNALSSVSDE---------EVKKMMAEIDTDGDGV 60
R F+R L GD ++SA+EL + LN + + + + M+A +D+D G
Sbjct: 4 RQFRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTGK 63
Query: 61 ISYDEF 66
+ ++EF
Sbjct: 64 LGFEEF 69
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 29.6 bits (65), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 3/58 (5%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSSV--SDEEVKKMMAEIDTDGDGVISYDEFT 67
E VF FD +G G IS E +S + SDE+ +K D D G + DE T
Sbjct: 119 EAVFDIFDKDGSGSISLDEWK-TYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDEMT 175
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 29.6 bits (65), Expect = 0.49, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 19/82 (23%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSD----------------EEVKKMMAEIDTDGD 58
F +D+N DG I+ E+ L + S+ D E V++ ++D + D
Sbjct: 171 FNLYDINKDGCITKEEM---LAIMKSIYDMMGRHTYPILREDAPLEHVERFFQKMDRNQD 227
Query: 59 GVISYDEFTAFAEANRGLIKNV 80
GV++ DEF + + ++ ++
Sbjct: 228 GVVTIDEFLETCQKDENIMNSM 249
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 29.6 bits (65), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Query: 15 FKRFDLNGDGKISASELADCLNAL------SSVSDEEVKKM----MAEIDTDGDGVISYD 64
F+ FD + DG ++ +L+ +N L + +S E+K++ + E D D DG I+
Sbjct: 104 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 163
Query: 65 EF 66
EF
Sbjct: 164 EF 165
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 29.3 bits (64), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTA 68
++KRFD + G I ++EL A ++ + M+ +D G + +D F +
Sbjct: 93 IYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDETGNMDFDNFIS 147
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 5 EQDKADRERVFKRF--DLNGDG-KISASELADCLNALSSVSDE---------EVKKMMAE 52
E ++++ ER F++ L GD ++SA+EL + LN + + + + M+A
Sbjct: 7 EANESEEERQFRKLFVQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTSRSMVAV 66
Query: 53 IDTDGDGVISYDEF 66
+D+D G + ++EF
Sbjct: 67 MDSDTTGKLGFEEF 80
>pdb|1NP8|A Chain A, 18-K C-Terminally Trunucated Small Subunit Of Calpain
pdb|1NP8|B Chain B, 18-K C-Terminally Trunucated Small Subunit Of Calpain
Length = 159
Score = 29.3 bits (64), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTA 68
++KRFD + G I ++EL A ++ + M+ +D G + +D F +
Sbjct: 89 IYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDETGNMDFDNFIS 143
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 5 EQDKADRERVFKRF--DLNGDG-KISASELADCLNALSSVSDE---------EVKKMMAE 52
E ++++ ER F++ L GD ++SA+EL + LN + + + + M+A
Sbjct: 3 EANESEEERQFRKLFVQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAV 62
Query: 53 IDTDGDGVISYDEF 66
+D+D G + ++EF
Sbjct: 63 MDSDTTGKLGFEEF 76
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 29.3 bits (64), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTA 68
++KRFD + G I ++EL A ++ + M+ +D G + +D F +
Sbjct: 93 IYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDETGNMDFDNFIS 147
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 5 EQDKADRERVFKRF--DLNGDG-KISASELADCLNALSSVSDE---------EVKKMMAE 52
E ++++ ER F++ L GD ++SA+EL + LN + + + + M+A
Sbjct: 7 EANESEEERQFRKLFVQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAV 66
Query: 53 IDTDGDGVISYDEF 66
+D+D G + ++EF
Sbjct: 67 MDSDTTGKLGFEEF 80
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 33/62 (53%), Gaps = 10/62 (16%)
Query: 15 FKRFDLNGDGKISASELADCLNALSS------VSDEEVKKM----MAEIDTDGDGVISYD 64
F+ FD + DG ++ +L+ +N L+ +S E+K++ + E D D DG I+
Sbjct: 135 FRIFDFDDDGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLS 194
Query: 65 EF 66
EF
Sbjct: 195 EF 196
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 29.3 bits (64), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTA 68
++KRFD + G I ++EL A ++ + M+ +D G + +D F +
Sbjct: 82 IYKRFDTDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDETGNMDFDNFIS 136
Score = 25.4 bits (54), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 12/67 (17%)
Query: 12 ERVFKRF--DLNGDG-KISASELADCLNALSSVSDE---------EVKKMMAEIDTDGDG 59
ER F++ L GD ++SA+EL + LN + + + + M+A +D+D G
Sbjct: 3 ERQFRKLFVQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAVMDSDTTG 62
Query: 60 VISYDEF 66
+ ++EF
Sbjct: 63 KLGFEEF 69
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 29.3 bits (64), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 27/55 (49%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTA 68
++K+FD + G I +SEL A +E + M+ +D G + +D F +
Sbjct: 93 IYKQFDTDRSGTICSSELPGAFEAAGFHLNEHLYNMIIRRYSDESGNMDFDNFIS 147
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 39/74 (52%), Gaps = 12/74 (16%)
Query: 5 EQDKADRERVFKRF--DLNGDG-KISASELADCLNALSSVSDE---------EVKKMMAE 52
E ++++ R F+R L GD ++SA+EL + LN + + + + M+A
Sbjct: 7 EANESEEVRQFRRLFAQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAV 66
Query: 53 IDTDGDGVISYDEF 66
+D+D G + ++EF
Sbjct: 67 MDSDTTGKLGFEEF 80
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 28.9 bits (63), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 21/33 (63%)
Query: 40 SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
+++D E K + D+DGDG I D++TA +A
Sbjct: 76 ALTDGETKTFLKAGDSDGDGKIGVDDWTALVKA 108
>pdb|2JPT|A Chain A, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
pdb|2JPT|B Chain B, Structural Changes Induced In Apo-s100a1 Protein By The
Disulphide Formation Between Its Cys85 Residue And B-
Mercaptoethanol
Length = 93
Score = 28.9 bits (63), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 25 KISASELADCLNA-LSSVSDEE-----VKKMMAEIDTDGDGVISYDEFTAFAEA 72
K+S EL + L LS D + V K+M E+D DGDG + + E+ A
Sbjct: 27 KLSKKELKELLQTELSGFLDAQKDADAVDKVMKELDEDGDGEVDFQEYVVLVAA 80
>pdb|3MSE|B Chain B, Crystal Structure Of C-Terminal Domain Of Pf110239
Length = 180
Score = 28.5 bits (62), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 25/55 (45%)
Query: 8 KADRERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVIS 62
K D R+ + D+N G I+ +E ++ +K +ID D DG IS
Sbjct: 72 KWDINRILQALDINDRGNITYTEFMAGCYRWKNIESTFLKAAFNKIDKDEDGYIS 126
>pdb|2E6W|A Chain A, Solution Structure And Calcium Binding Properties Of Ef-
Hands 3 And 4 Of Calsenilin
Length = 100
Score = 28.5 bits (62), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/65 (23%), Positives = 31/65 (47%), Gaps = 13/65 (20%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSV-------------SDEEVKKMMAEIDTDGDGVI 61
F +D+N DG I+ E+ + ++ + E V++ ++D + DGV+
Sbjct: 15 FNLYDINKDGYITKEEMLAIMKSIYDMMGRHTYPILREDAPAEHVERFFEKMDRNQDGVV 74
Query: 62 SYDEF 66
+ +EF
Sbjct: 75 TIEEF 79
>pdb|3CS1|A Chain A, Flagellar Calcium-binding Protein (fcabp) From T. Cruzi
Length = 219
Score = 28.1 bits (61), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 44 EEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
E+ + E+D +G G +++DEF A+A A
Sbjct: 167 EDPAALFKELDKNGTGSVTFDEFAAWASA 195
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFT 67
F FD G I L + L + +DEEV +M E D G +Y EFT
Sbjct: 82 FACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFNYVEFT 135
>pdb|2BE4|A Chain A, X-ray Structure An Ef-hand Protein From Danio Rerio
Dr.36843
pdb|2Q4U|A Chain A, Ensemble Refinement Of The Crystal Structure Of An Ef-Hand
Protein From Danio Rerio Dr.36843
Length = 272
Score = 28.1 bits (61), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 15/25 (60%)
Query: 11 RERVFKRFDLNGDGKISASELADCL 35
RE + D N DGKI SELA CL
Sbjct: 242 RECLLTHCDXNKDGKIQKSELALCL 266
>pdb|1JBA|A Chain A, Unmyristoylated Gcap-2 With Three Calcium Ions Bound
Length = 204
Score = 28.1 bits (61), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 32/79 (40%), Gaps = 1/79 (1%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLN-ALSSVSDEEVKKMMAEIDTDGDG 59
+ D E+ E +F+ FD NGD I E LN L + ++K D D +G
Sbjct: 51 VPDNEEATQYVEAMFRAFDTNGDNTIDFLEYVAALNLVLRGTLEHKLKWTFKIYDKDRNG 110
Query: 60 VISYDEFTAFAEANRGLIK 78
I E E+ L K
Sbjct: 111 CIDRQELLDIVESIYKLKK 129
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 37/83 (44%), Gaps = 18/83 (21%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSSV------------------SDEEVKKMMAEIDT 55
FK +D + +G I EL D + ++ + +E V ++ +D
Sbjct: 100 TFKIYDKDRNGCIDRQELLDIVESIYKLKKACSVEVEAEQQGKLLTPEEVVDRIFLLVDE 159
Query: 56 DGDGVISYDEFTAFAEANRGLIK 78
+GDG +S +EF A ++ ++K
Sbjct: 160 NGDGQLSLNEFVEGARRDKWVMK 182
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 28.1 bits (61), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 40/74 (54%), Gaps = 12/74 (16%)
Query: 5 EQDKADRERVFKRF--DLNGDG-KISASELADCLNALSSVSDE---------EVKKMMAE 52
E ++++ ER F++ L GD ++SA+EL + LN + + + + M+A
Sbjct: 723 EANESEEERQFRKLFVQLAGDDMEVSATELMNILNKVVTRHPDLKTDGFGIDTCRSMVAV 782
Query: 53 IDTDGDGVISYDEF 66
+D+D G + ++EF
Sbjct: 783 MDSDTTGKLGFEEF 796
Score = 27.7 bits (60), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/55 (23%), Positives = 27/55 (49%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTA 68
++KRF+ + G I ++EL A ++ + M+ +D G + +D F +
Sbjct: 809 IYKRFETDRSGTIGSNELPGAFEAAGFHLNQHIYSMIIRRYSDETGNMDFDNFIS 863
Score = 25.4 bits (54), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 13/54 (24%), Positives = 28/54 (51%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFT 67
+F++FDL+ G +SA E+ + A ++ +++ D + +I +D F
Sbjct: 612 IFRKFDLDKSGSMSAYEMRMAIEAAGFKLPCQLHQVIVARFADDELIIDFDNFV 665
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDE 65
D ++ F D + G I EL L + ++D E K + D+DGDG I +E
Sbjct: 43 DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEE 102
Query: 66 FTAFAEA 72
+ A +A
Sbjct: 103 WVALVKA 109
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 31/67 (46%), Gaps = 4/67 (5%)
Query: 10 DRERVFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDE 65
D ++ F D + G I EL L + ++D E K + D+DGDG I +E
Sbjct: 42 DIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIGVEE 101
Query: 66 FTAFAEA 72
+ A +A
Sbjct: 102 WVALVKA 108
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 27.7 bits (60), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 53 IDTDGDGVISYDEFTAFAEA 72
IDTD DG +S EF AF +A
Sbjct: 111 IDTDKDGYVSLPEFKAFLQA 130
>pdb|1IJ5|A Chain A, Metal-Free Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
pdb|1IJ6|A Chain A, Ca2+-Bound Structure Of Multidomain Ef-Hand Protein,
Cbp40, From True Slime Mold
Length = 323
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Query: 20 LNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEANRGLIK 78
++G GK S +L L + ++ + +KK+ ++ D G +SY A A L+
Sbjct: 133 VSGSGKFSFQDLKQVLAKYADTIPEGPLKKLFVMVENDTKGRMSYITLVAVANDLAALVA 192
Query: 79 NVAKI 83
+ KI
Sbjct: 193 DFRKI 197
>pdb|2LLS|A Chain A, Solution Structure Of Human Apo-S100a1 C85m
pdb|2LLS|B Chain B, Solution Structure Of Human Apo-S100a1 C85m
Length = 93
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 25 KISASELADCLNA-LSSVSDEE-----VKKMMAEIDTDGDGVISYDEFTAFAEA 72
K+S EL + L LS D + V K+M E+D +GDG + + E+ A
Sbjct: 27 KLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|2LLT|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LLT|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
Length = 93
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 25 KISASELADCLNA-LSSVSDEE-----VKKMMAEIDTDGDGVISYDEFTAFAEA 72
K+S EL + L LS D + V K+M E+D +GDG + + E+ A
Sbjct: 27 KLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 12/20 (60%), Positives = 14/20 (70%)
Query: 53 IDTDGDGVISYDEFTAFAEA 72
IDTD DG +S EF AF +A
Sbjct: 111 IDTDKDGYVSLPEFKAFLQA 130
>pdb|1QJT|A Chain A, Solution Structure Of The Apo Eh1 Domain Of Mouse
Epidermal Growth Factor Receptor Substrate 15, Eps15
Length = 99
Score = 27.3 bits (59), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 12 ERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
E+ +++ + G++ A + A L S + D + K+ DTDG GV+S EF
Sbjct: 14 EKYYRQVEAGNTGRVLALDAAAFLKK-SGLPDLILGKIWDLADTDGKGVLSKQEF 67
>pdb|2LLU|A Chain A, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LLU|B Chain B, Post-Translational S-Nitrosylation Is An Endogenous
Factor Fine-Tuning Human S100a1 Protein Properties
pdb|2LP2|A Chain A, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide
Bond Formation In Calcium Saturated Form
pdb|2LP2|B Chain B, Solution Structure And Dynamics Of Human S100a1 Protein
Modified At Cysteine 85 With Homocysteine Disulfide
Bond Formation In Calcium Saturated Form
pdb|2LP3|A Chain A, Solution Structure Of S100a1 Ca2+
pdb|2LP3|B Chain B, Solution Structure Of S100a1 Ca2+
Length = 93
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 25 KISASELADCLNA-LSSVSDEE-----VKKMMAEIDTDGDGVISYDEFTAFAEA 72
K+S EL + L LS D + V K+M E+D +GDG + + E+ A
Sbjct: 27 KLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|2L0P|A Chain A, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
pdb|2L0P|B Chain B, Solution Structure Of Human Apo-S100a1 Protein By Nmr
Spectroscopy
Length = 94
Score = 27.3 bits (59), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 25 KISASELADCLNA-LSSVSDEE-----VKKMMAEIDTDGDGVISYDEFTAFAEA 72
K+S EL + L LS D + V K+M E+D +GDG + + E+ A
Sbjct: 28 KLSKKELKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLVAA 81
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 26.9 bits (58), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 16/22 (72%)
Query: 45 EVKKMMAEIDTDGDGVISYDEF 66
E++ M+ E+D DG+G I + EF
Sbjct: 2 ELQDMINEVDADGNGTIDFPEF 23
Score = 26.2 bits (56), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 1 MADEEQDKADRERVFKRFDLNGDGKISASELADCLNAL 38
M D + ++ RE F+ FD +G+G ISA+EL + L
Sbjct: 31 MKDTDSEEEIRE-AFRVFDKDGNGYISAAELRHVMTNL 67
>pdb|2G9B|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
pdb|2F33|A Chain A, Nmr Solution Structure Of Ca2+-Loaded Calbindin D28k
Length = 263
Score = 26.9 bits (58), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 28/65 (43%), Gaps = 9/65 (13%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSS---------VSDEEVKKMMAEIDTDGDGVISYD 64
+ K FD N DGK+ +E+A L + + +E K D DG+G I +
Sbjct: 152 MLKLFDSNNDGKLELTEMARLLPVQENFLLKFQGIKMCGKEFNKAFELYDQDGNGYIDEN 211
Query: 65 EFTAF 69
E A
Sbjct: 212 ELDAL 216
>pdb|3KEO|A Chain A, Crystal Structure Of A Rex-Family Transcriptional
Regulatory Protein From Streptococcus Agalactiae
Complexed With Nad+
pdb|3KEO|B Chain B, Crystal Structure Of A Rex-Family Transcriptional
Regulatory Protein From Streptococcus Agalactiae
Complexed With Nad+
pdb|3KEQ|A Chain A, Crystal Structure Of A Rex-Family Transcriptional
Regulatory Protein From Streptococcus Agalactiae
Complexed With Nad+
pdb|3KEQ|B Chain B, Crystal Structure Of A Rex-Family Transcriptional
Regulatory Protein From Streptococcus Agalactiae
Complexed With Nad+
pdb|3KET|A Chain A, Crystal Structure Of A Rex-Family Transcriptional
Regulatory Protein From Streptococcus Agalactiae Bound
To A Palindromic Operator
Length = 212
Score = 26.9 bits (58), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 11/23 (47%), Positives = 17/23 (73%)
Query: 13 RVFKRFDLNGDGKISASELADCL 35
R+FKRF+ +G K S+ ++AD L
Sbjct: 20 RIFKRFNTDGIEKASSKQIADAL 42
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 26.9 bits (58), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 14 VFKRFDLNGDGKISASELADCLNALSS----VSDEEVKKMMAEIDTDGDGVISYDEF 66
+F+ D + G I EL L S ++ E K +A D DGDG I +EF
Sbjct: 46 IFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGKIGAEEF 102
>pdb|1NSH|A Chain A, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
pdb|1NSH|B Chain B, Solution Structure Of Rabbit Apo-S100a11 (19 Models)
Length = 101
Score = 26.6 bits (57), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 5 EQDKADRERVFKRFDLNGDGKISASELADCLNALSSVSDEEVKK 48
++D +R+ K+ DLN DG++ E + + L+ E K
Sbjct: 50 QKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLAVACHESFVK 93
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 26.6 bits (57), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 29 SELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTAFA 70
+E L +S++ + + E+D +GDG +S++EF
Sbjct: 34 TEFPSLLKGMSTLDE-----LFEELDKNGDGEVSFEEFQVLV 70
>pdb|2Y5I|A Chain A, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|B Chain B, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|C Chain C, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|D Chain D, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|E Chain E, S100z From Zebrafish In Complex With Calcium
pdb|2Y5I|F Chain F, S100z From Zebrafish In Complex With Calcium
Length = 99
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 25 KISASELADCLNA------LSSVSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
K+S EL + LNA +S V+K+M ++D++ D + ++EF A
Sbjct: 28 KLSKGELKELLNAELTDFLMSQKDPMLVEKIMNDLDSNKDNEVDFNEFVVLVAA 81
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 26.6 bits (57), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 29 SELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTAFA 70
+E L +S++ + + E+D +GDG +S++EF
Sbjct: 35 TEFPSLLKGMSTLDE-----LFEELDKNGDGEVSFEEFQVLV 71
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 29 SELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTAFA 70
+E L +S++ + + E+D +GDG +S++EF
Sbjct: 35 TEFPSLLKGMSTLDE-----LFEELDKNGDGEVSFEEFQVLV 71
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 15 FKRFDLNGDGKISASELADCLNALSS-VSDEEVKKM--MAEIDTDGDGVISYDEF 66
FK FD G G IS++E+ + L L +++++ + +I D DG I Y++
Sbjct: 91 FKTFDREGQGLISSAEIRNVLKMLGERITEDQCNDIFTFCDIREDIDGNIKYEDL 145
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 26.6 bits (57), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 22/42 (52%), Gaps = 5/42 (11%)
Query: 29 SELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTAFA 70
+E L +S++ + + E+D +GDG +S++EF
Sbjct: 38 TEFPSLLKGMSTLDE-----LFEELDKNGDGEVSFEEFQVLV 74
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 26.6 bits (57), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 20/32 (62%)
Query: 41 VSDEEVKKMMAEIDTDGDGVISYDEFTAFAEA 72
V++E+++ +M + D + DG I +DEF E
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMMEG 33
>pdb|2LHL|A Chain A, Chemical Shift Assignments And Solution Structure Of
Human Apo-S100a1 E32q Mutant
pdb|2LHL|B Chain B, Chemical Shift Assignments And Solution Structure Of
Human Apo-S100a1 E32q Mutant
Length = 93
Score = 26.2 bits (56), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 6/54 (11%)
Query: 25 KISASELADCLNA-LSSVSDEE-----VKKMMAEIDTDGDGVISYDEFTAFAEA 72
K+S +L + L LS D + V K+M E+D +GDG + + E+ A
Sbjct: 27 KLSKKQLKELLQTELSGFLDAQKDVDAVDKVMKELDENGDGEVDFQEYVVLVAA 80
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A
Conformational Opening) At 1.44 A Resolution
Length = 76
Score = 26.2 bits (56), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 9/18 (50%), Positives = 15/18 (83%)
Query: 49 MMAEIDTDGDGVISYDEF 66
M+ E+D +GDG +S++EF
Sbjct: 50 MIEEVDKNGDGEVSFEEF 67
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 26.2 bits (56), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 2/53 (3%)
Query: 15 FKRFDLNGDGKISASELADCLNALS-SVSDEEVKKMMAEIDTDGDGVISYDEF 66
F FD GDGK L L S +EV + ++E DG+G+I +F
Sbjct: 132 FNLFD-EGDGKCKEETLKRSLTTWGEKFSQDEVDQALSEAPIDGNGLIDIKKF 183
>pdb|2HPK|A Chain A, Crystal Structure Of Photoprotein Berovin From Beroe
Abyssicola
Length = 208
Score = 25.8 bits (55), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 6/42 (14%)
Query: 13 RVFKRFD---LNGDGKISASEL---ADCLNALSSVSDEEVKK 48
R++KRFD L+ DGK E+ D L + +DE+V+K
Sbjct: 37 RLYKRFDTFDLDSDGKXEXDEVLYWPDRXRQLVNATDEQVEK 78
>pdb|2FJU|B Chain B, Activated Rac1 Bound To Its Effector Phospholipase C Beta
2
pdb|2ZKM|X Chain X, Crystal Structure Of Phospholipase C Beta 2
Length = 799
Score = 25.4 bits (54), Expect = 7.9, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 20/30 (66%)
Query: 40 SVSDEEVKKMMAEIDTDGDGVISYDEFTAF 69
++ +EE+KKM ++ T G V +Y+E ++
Sbjct: 516 NLDEEEIKKMQSDEGTAGLEVTAYEEMSSL 545
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 25.4 bits (54), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 49 MMAEIDTDGDGVISYDEFTAF 69
+ E+D +GDG +S++EF
Sbjct: 52 LFQELDKNGDGEVSFEEFQVL 72
>pdb|3A8R|A Chain A, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
pdb|3A8R|B Chain B, The Structure Of The N-Terminal Regulatory Domain Of A
Plant Nadph Oxidase
Length = 179
Score = 25.4 bits (54), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 30/64 (46%), Gaps = 9/64 (14%)
Query: 15 FKRFDLNGDGKISASELADCL------NALSSV---SDEEVKKMMAEIDTDGDGVISYDE 65
F D N DG+++A E+ + + N LS + +DE +M E+D G I ++
Sbjct: 104 FDMVDKNADGRLTAEEVKEIIALSASANKLSKIKERADEYTALIMEELDPTNLGYIEMED 163
Query: 66 FTAF 69
A
Sbjct: 164 LEAL 167
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The
Structure Of Other Calcium-Binding Proteins
Length = 75
Score = 25.4 bits (54), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 29 SELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTAFA 70
+E L S++ + + E+D +GDG +S++EF
Sbjct: 34 TEFPSLLKGPSTLDE-----LFEELDKNGDGEVSFEEFQVLV 70
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 25.4 bits (54), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
Query: 14 VFKRFDLNGDGKISASELADCLNALS--SVSDEEVKKMMAEIDTDGDGVISYDEFT 67
VF FD +G G I+ E +S S S+E+ +K D D G + DE T
Sbjct: 118 VFDIFDKDGSGTITLDEWK-AYGRISGISPSEEDCEKTFQHCDLDNSGELDVDEMT 172
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By
X- Ray Crystallography
Length = 76
Score = 25.4 bits (54), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 11/42 (26%), Positives = 21/42 (50%), Gaps = 5/42 (11%)
Query: 29 SELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTAFA 70
+E L S++ + + E+D +GDG +S++EF
Sbjct: 35 TEFPSLLKGPSTLDE-----LFEELDKNGDGEVSFEEFQVLV 71
>pdb|2QG6|A Chain A, Crystal Structure Of Human Nicotinamide Riboside Kinase
(Nrk1) In Complex With Nicotinamide Mononucleotide
(Nmn)
pdb|2QL6|A Chain A, Human Nicotinamide Riboside Kinase (Nrk1)
pdb|2QL6|B Chain B, Human Nicotinamide Riboside Kinase (Nrk1)
pdb|2QL6|C Chain C, Human Nicotinamide Riboside Kinase (Nrk1)
pdb|2QL6|D Chain D, Human Nicotinamide Riboside Kinase (Nrk1)
pdb|2QL6|E Chain E, Human Nicotinamide Riboside Kinase (Nrk1)
pdb|2QL6|F Chain F, Human Nicotinamide Riboside Kinase (Nrk1)
pdb|2QL6|G Chain G, Human Nicotinamide Riboside Kinase (Nrk1)
pdb|2QL6|H Chain H, Human Nicotinamide Riboside Kinase (Nrk1)
pdb|2QL6|I Chain I, Human Nicotinamide Riboside Kinase (Nrk1)
pdb|2QL6|J Chain J, Human Nicotinamide Riboside Kinase (Nrk1)
pdb|2QL6|K Chain K, Human Nicotinamide Riboside Kinase (Nrk1)
pdb|2QL6|L Chain L, Human Nicotinamide Riboside Kinase (Nrk1)
pdb|2QL6|M Chain M, Human Nicotinamide Riboside Kinase (Nrk1)
pdb|2QL6|N Chain N, Human Nicotinamide Riboside Kinase (Nrk1)
pdb|2QL6|O Chain O, Human Nicotinamide Riboside Kinase (Nrk1)
pdb|2QL6|P Chain P, Human Nicotinamide Riboside Kinase (Nrk1)
Length = 199
Score = 25.0 bits (53), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/51 (31%), Positives = 25/51 (49%), Gaps = 1/51 (1%)
Query: 20 LNGDGKIS-ASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEFTAF 69
+ GK + A L L S +S ++ K +EI+TD +G + YD A
Sbjct: 11 VTNSGKTTLAKNLQKHLPNCSVISQDDFFKPESEIETDKNGFLQYDVLEAL 61
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 25.0 bits (53), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/52 (28%), Positives = 25/52 (48%)
Query: 15 FKRFDLNGDGKISASELADCLNALSSVSDEEVKKMMAEIDTDGDGVISYDEF 66
+ FD G+G + +EL L L EE + + + D +G I+Y+ F
Sbjct: 91 LRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELMKGQEDSNGCINYEAF 142
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.313 0.131 0.351
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,296,838
Number of Sequences: 62578
Number of extensions: 78887
Number of successful extensions: 1189
Number of sequences better than 100.0: 327
Number of HSP's better than 100.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 36
Number of HSP's that attempted gapping in prelim test: 352
Number of HSP's gapped (non-prelim): 585
length of query: 84
length of database: 14,973,337
effective HSP length: 52
effective length of query: 32
effective length of database: 11,719,281
effective search space: 375016992
effective search space used: 375016992
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 45 (21.9 bits)