BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046932
(162 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P0CH03|AT21C_ARATH Putative RING-H2 finger protein ATL21C OS=Arabidopsis thaliana
GN=ATL21C PE=3 SV=1
Length = 366
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 33/54 (61%)
Query: 97 VDGEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRATC 150
+ G +GIVC +C E + R I EC H FH CI WLKI+ +CPLCR +C
Sbjct: 312 LSGTNGIVCPICLSEYASKETVRFIPECDHCFHVECIDVWLKIHGSCPLCRNSC 365
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%)
Query: 99 GEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRATCKPK 153
G+ G+ C +C E E E R + C H FH SCI WL +TCP+CRA+ PK
Sbjct: 122 GKGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASLPPK 176
>sp|P0CH01|AT21A_ARATH Putative RING-H2 finger protein ATL21A OS=Arabidopsis thaliana
GN=ATL21A PE=3 SV=1
Length = 372
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 31/56 (55%)
Query: 99 GEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRATCKPKK 154
D IVC +C E + R I EC H FH CI WLKI+ +CPLCR + P +
Sbjct: 314 NNDDIVCPICLSEYASKETVRCIPECDHCFHSECIDVWLKIHGSCPLCRNSPSPAR 369
>sp|P0CH02|AT21B_ARATH Putative RING-H2 finger protein ATL21B OS=Arabidopsis thaliana
GN=ATL21B PE=3 SV=1
Length = 362
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 30/50 (60%)
Query: 98 DGEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCR 147
G +GIVC +C E + R I EC H FH CI WLKI+ +CPLCR
Sbjct: 309 PGTNGIVCPICLSEYVSKETVRFIPECDHCFHAKCIDVWLKIHGSCPLCR 358
>sp|Q9SK92|ATL15_ARATH E3 ubiquitin-protein ligase ATL15 OS=Arabidopsis thaliana GN=ATL15
PE=1 SV=1
Length = 381
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 8/86 (9%)
Query: 75 IHLAKLLEPTID-------PALACTTALSVD-GEDGIVCGVCQEEMEKEHEARAIMECMH 126
+++ + EP +D P +T ++ G++ + C VC E E + R I +C H
Sbjct: 80 LNVRQTTEPGLDASVIETFPTFPYSTVKTLRIGKEALECPVCLNEFEDDETLRLIPQCCH 139
Query: 127 MFHDSCILKWLKINNTCPLCRATCKP 152
+FH CI WL+ TCPLCRA P
Sbjct: 140 VFHPGCIDAWLRSQTTCPLCRANLVP 165
>sp|O22255|ATL64_ARATH RING-H2 finger protein ATL64 OS=Arabidopsis thaliana GN=ATL64 PE=2
SV=1
Length = 227
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 3/57 (5%)
Query: 105 CGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRATCKPKKLHFQEIK 161
C VC E E+E E R + +C H FH CI W + +TCPLCRA +P FQ I+
Sbjct: 108 CSVCLSEFEEEDEGRLLPKCGHSFHVDCIDTWFRSRSTCPLCRAPVQPP---FQVIE 161
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 14/96 (14%)
Query: 55 AQTQQKDFKTALMEVELQVSIHLAKLLEPTIDPALACTTALSVDGEDGIVCGVCQEEMEK 114
AQ+Q+ A ++ ++ SIH+ CT D +DG+ C VC ++
Sbjct: 84 AQSQEDPLHNAGLDSKILQSIHVV---------VFKCT-----DFKDGLECAVCLSDLVD 129
Query: 115 EHEARAIMECMHMFHDSCILKWLKINNTCPLCRATC 150
+AR + C H FH CI W + ++TCPLCR T
Sbjct: 130 GDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV 165
>sp|Q9C7E9|ATL20_ARATH RING-H2 finger protein ATL20 OS=Arabidopsis thaliana GN=ATL20 PE=2
SV=2
Length = 299
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 97 VDGEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCR 147
+ G +GI+C +C E + R + EC H FH CI +WLKI+++CP+CR
Sbjct: 245 LPGTNGIICPICLSEYASKETVRCMPECDHCFHVQCIDEWLKIHSSCPVCR 295
>sp|Q84W40|ATL11_ARATH RING-H2 finger protein ATL11 OS=Arabidopsis thaliana GN=ATL11 PE=2
SV=2
Length = 404
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 32/54 (59%)
Query: 99 GEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRATCKP 152
G++ + C VC E E + R I +C H+FH CI WL+ + TCPLCRA P
Sbjct: 138 GKEALECSVCLNEFEDDETLRLIPKCCHVFHPGCIDAWLRSHTTCPLCRADLIP 191
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 105 CGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRATCKPKK 154
C VC E E++ E R + +C H+FH CI W + ++CPLCRA +P +
Sbjct: 113 CSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRSSCPLCRAPVQPAQ 162
>sp|Q9SKK8|ATL22_ARATH RING-H2 finger protein ATL22 OS=Arabidopsis thaliana GN=ATL22 PE=2
SV=2
Length = 377
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%)
Query: 99 GEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRATCKP 152
G + +VC +C E + R + EC H FH CI WLK++++CP+CR+ P
Sbjct: 321 GSNDVVCPICLSEYATKETVRCLPECEHCFHTECIDAWLKLHSSCPVCRSNPSP 374
>sp|Q7ZW78|RN181_DANRE E3 ubiquitin-protein ligase RNF181 OS=Danio rerio GN=rnf181 PE=2
SV=2
Length = 156
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
Query: 99 GEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRATCKPKKLHFQ 158
+ G+ C VC E E++ R M C H+FH CIL WL N+CPLCR ++
Sbjct: 73 ADKGVKCPVCLLEFEEQESVRE-MPCKHLFHTGCILPWLNKTNSCPLCRLELPTDNADYE 131
Query: 159 EIK 161
E K
Sbjct: 132 EFK 134
>sp|Q9Y4L5|RN115_HUMAN E3 ubiquitin-protein ligase RNF115 OS=Homo sapiens GN=RNF115 PE=1
SV=2
Length = 304
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 102 GIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRAT 149
G+ C VC+E+ E E R + C H FH SCI+ WL++++TCP+CR +
Sbjct: 225 GLECPVCKEDYTVEEEVRQ-LPCNHFFHSSCIVPWLELHDTCPVCRKS 271
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 73 VSIHLAKLLEPTIDPALACTTALSVDGEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSC 132
S+ ++ L+P + +L T +D I C VC E E+ R + C H FH C
Sbjct: 87 TSVVASRGLDPNVIKSLPVFTFSDETHKDPIECAVCLSEFEESETGRVLPNCQHTFHVDC 146
Query: 133 ILKWLKINNTCPLCRA 148
I W ++TCPLCR+
Sbjct: 147 IDMWFHSHSTCPLCRS 162
>sp|Q9LRB7|EL5_ORYSJ E3 ubiquitin-protein ligase EL5 OS=Oryza sativa subsp. japonica
GN=EL5.1 PE=1 SV=1
Length = 325
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 102 GIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRAT 149
G+ C VC E+E EAR + C H FH C+ WL ++TCPLCR T
Sbjct: 131 GVECAVCLAELEDGEEARFLPRCGHGFHAECVDMWLGSHSTCPLCRLT 178
>sp|Q8RX29|ATL70_ARATH RING-H2 finger protein ATL70 OS=Arabidopsis thaliana GN=ATL70 PE=2
SV=1
Length = 217
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%)
Query: 105 CGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRATCKPKKL 155
C +C + + +H R + +C H+FH CI WL++N TCP+CR + P L
Sbjct: 147 CAICLGDYKGKHLLRQLPDCNHLFHLKCIDTWLRLNPTCPVCRTSPLPTPL 197
>sp|Q9SLC3|ATL41_ARATH E3 ubiquitin-protein ligase ATL41 OS=Arabidopsis thaliana GN=ATL41
PE=1 SV=1
Length = 236
Score = 54.3 bits (129), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 8/78 (10%)
Query: 81 LEPTIDPALACTTALSVDGEDGIV-----CGVCQEEMEKEHEARAIMECMHMFHDSCILK 135
L PT+ +A +V DG+ C VC ++++ +AR + C H+FH C+
Sbjct: 82 LNPTV---IASLPTFTVGATDGVAASATECAVCLSVLKEQDKARELPNCKHIFHVDCVDT 138
Query: 136 WLKINNTCPLCRATCKPK 153
WL +TCP+CR +P+
Sbjct: 139 WLTTCSTCPVCRTEVEPR 156
>sp|Q9D0C1|RN115_MOUSE E3 ubiquitin-protein ligase RNF115 OS=Mus musculus GN=Rnf115 PE=1
SV=1
Length = 305
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 33/48 (68%), Gaps = 1/48 (2%)
Query: 102 GIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRAT 149
G+ C VC+E+ E + R + C H FH SCI+ WL++++TCP+CR +
Sbjct: 226 GLECPVCKEDYTVEEKVRQ-LPCNHFFHSSCIVPWLELHDTCPVCRKS 272
>sp|Q9SLC4|ATL40_ARATH RING-H2 finger protein ATL40 OS=Arabidopsis thaliana GN=ATL40 PE=2
SV=1
Length = 217
Score = 53.9 bits (128), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 30/51 (58%)
Query: 102 GIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRATCKP 152
G C VC +E++ AR + C H+FH SC+ WL +TCP+CR +P
Sbjct: 97 GTECAVCLSLLEEKDNARMLPNCKHVFHVSCVDTWLTTQSTCPVCRTEAEP 147
>sp|Q9FHG8|ATL50_ARATH Putative RING-H2 finger protein ATL50 OS=Arabidopsis thaliana
GN=ATL50 PE=3 SV=1
Length = 210
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 50/106 (47%), Gaps = 11/106 (10%)
Query: 52 MSRAQTQQKDFKTALME--------VELQVSIHLAKLLEPTID--PALACTTALSVDGED 101
+ R QT+ D + E + + ++H A++ + ID P L T + + D
Sbjct: 60 LHRPQTRLDDAYDGITESSTALQGRYQTRFNLHDAEIDQSFIDALPLLHYKTMIGL-RHD 118
Query: 102 GIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCR 147
C VC E E E R + +C H FH CI WL N+TCPLCR
Sbjct: 119 LSDCAVCLREFTAEDELRLLPKCSHAFHVECIDTWLLTNSTCPLCR 164
>sp|Q9LF64|ATL52_ARATH RING-H2 finger protein ATL52 OS=Arabidopsis thaliana GN=ATL52 PE=2
SV=1
Length = 362
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 97 VDGEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRA 148
VDG D C VC E E+ R + +C H FH CI WLK ++ CPLCRA
Sbjct: 137 VDGSD---CSVCLSEFEENESLRLLPKCNHAFHLPCIDTWLKSHSNCPLCRA 185
>sp|Q9VE61|RN181_DROME E3 ubiquitin-protein ligase RNF181 homolog OS=Drosophila
melanogaster GN=CG7694 PE=2 SV=1
Length = 147
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 96 SVDGEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRATCKPKKL 155
S +G D + C VC+E E+ + R I+ C H FH+ CIL WLK N+CPLCR +
Sbjct: 62 SDEGGD-LECSVCKEPAEEGQKYR-ILPCKHEFHEECILLWLKKTNSCPLCRYELETDDP 119
Query: 156 HFQEIK 161
++E++
Sbjct: 120 VYEELR 125
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 99 GEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRAT 149
G G+ C +C E E E R + C H FH +CI +WL +TCP+CRA
Sbjct: 114 GNGGVECAICLCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRAN 164
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 53.1 bits (126), Expect = 7e-07, Method: Composition-based stats.
Identities = 23/52 (44%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 96 SVDGEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCR 147
S+D E G +C VC + ++ R + CMH FH CI +WL N TCP+CR
Sbjct: 623 SIDSELGKICSVCISDYVTGNKLRQ-LPCMHEFHIHCIDRWLSENCTCPICR 673
>sp|Q9FG21|ATL71_ARATH Putative RING-H2 finger protein ATL71 OS=Arabidopsis thaliana
GN=ATL71 PE=3 SV=1
Length = 197
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 105 CGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRATCKPKK 154
C +C + +K R + +C H+FHD+C+ WL+++ TCP+CR + P
Sbjct: 129 CSICLADYKKMDMIRVLPDCNHLFHDNCVDPWLRLHPTCPVCRTSPLPSP 178
>sp|Q9FIR0|ATL30_ARATH RING-H2 finger protein ATL30 OS=Arabidopsis thaliana GN=ATL30 PE=2
SV=1
Length = 289
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 102 GIVCGVCQEEMEKEH-EARAIMECMHMFHDSCILKWLKINNTCPLCRATCKPK 153
G+ C +C E E+EH R + C H+FH CI +WL+ N TCP+CR P
Sbjct: 111 GLECAICLLEFEEEHILLRLLTTCYHVFHQECIDQWLESNKTCPVCRRNLDPN 163
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%)
Query: 100 EDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRAT 149
+DG+ C +C E+ K +AR + +C H FH CI W + ++TCP+CR T
Sbjct: 122 KDGLECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNT 171
>sp|Q9FL42|ATL69_ARATH Putative RING-H2 finger protein ATL69 OS=Arabidopsis thaliana
GN=ATL69 PE=3 SV=1
Length = 159
Score = 53.1 bits (126), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 29/51 (56%)
Query: 105 CGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRATCKPKKL 155
C +C + E R I EC H FH C+ +WL+ + TCPLCR + P +L
Sbjct: 94 CSICLCDYEAREPVRCIPECNHCFHTDCVDEWLRTSATCPLCRNSPAPSRL 144
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 105 CGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCR 147
C VC ++ E+ EA+ M C H++H C+L WL+++N+CP+CR
Sbjct: 224 CAVCMDDFEEGTEAKQ-MPCKHLYHKDCLLPWLELHNSCPVCR 265
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 2/60 (3%)
Query: 99 GEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRA--TCKPKKLH 156
G+ G+ C +C E E + R + C H FH +CI WL +TCP+CRA + KP + +
Sbjct: 117 GKGGVECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSLKPGESY 176
>sp|Q8LPN7|RNG1L_ARATH E3 ubiquitin-protein ligase RING1-like OS=Arabidopsis thaliana
GN=At3g19950 PE=2 SV=1
Length = 328
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%), Gaps = 1/43 (2%)
Query: 105 CGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCR 147
C VC +E E + + M C H+FH C+L WL+++N+CP+CR
Sbjct: 216 CAVCMDEFEDGSDVKQ-MPCKHVFHQDCLLPWLELHNSCPVCR 257
>sp|O64763|ATL9_ARATH E3 ubiquitin-protein ligase ATL9 OS=Arabidopsis thaliana GN=ATL9
PE=1 SV=1
Length = 378
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 30/50 (60%)
Query: 99 GEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRA 148
G+ G+ C VC E E + R + C H+FH C+ WL ++TCPLCRA
Sbjct: 129 GKGGVECAVCLCEFEDDETLRLMPPCCHVFHADCVDVWLSEHSTCPLCRA 178
>sp|Q8GW38|ATL47_ARATH RING-H2 finger protein ATL47 OS=Arabidopsis thaliana GN=ATL47 PE=2
SV=1
Length = 369
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 6/112 (5%)
Query: 43 LETMTKNLAMSRAQTQQK----DFKTALMEVELQVSIHLAKLLEPTIDPALACTTALSVD 98
L+ NL+ S ++ Q D T +++ +H + L + ID AL +
Sbjct: 78 LKKKRSNLSSSPNESNQNPEFSDSDTYQRQLQQLFHLHDSGLDQALID-ALPVFLYKEIK 136
Query: 99 G-EDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRAT 149
G ++ C VC E ++ + R + C H FH CI WL N+TCPLCR T
Sbjct: 137 GTKEPFDCAVCLCEFSEDDKLRLLPNCSHAFHIDCIDTWLLSNSTCPLCRGT 188
>sp|Q9LX93|ATL55_ARATH E3 ubiquitin-protein ligase RING1 OS=Arabidopsis thaliana GN=ATL55
PE=1 SV=1
Length = 301
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 28/48 (58%)
Query: 101 DGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRA 148
DG C VC E E++ R + +C H FH +CI WL + CPLCRA
Sbjct: 131 DGTECSVCLNEFEEDESLRLLPKCSHAFHLNCIDTWLLSHKNCPLCRA 178
>sp|Q91YL2|RN126_MOUSE RING finger protein 126 OS=Mus musculus GN=Rnf126 PE=1 SV=1
Length = 313
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 1/48 (2%)
Query: 102 GIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRAT 149
G+ C VC+E+ R + C H+FHDSCI+ WL+ +++CP+CR +
Sbjct: 228 GLECPVCKEDYALGESVRQ-LPCNHLFHDSCIVPWLEQHDSCPVCRKS 274
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 97 VDGEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCR 147
VD E G VC VC + ++ R + C+H FH CI +WL N TCP+CR
Sbjct: 606 VDSELGKVCSVCISDYVAGNKLRQ-LPCLHEFHIHCIDRWLSENCTCPVCR 655
>sp|Q5EAE9|ATL43_ARATH RING-H2 finger protein ATL43 OS=Arabidopsis thaliana GN=ATL43 PE=2
SV=2
Length = 407
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%)
Query: 100 EDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRATCKPKKL 155
+DG+ C VC E R + +C H FH C+ WL ++TCPLCR P+ +
Sbjct: 141 KDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCPLCRYRVDPEDI 196
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 104 VCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRA 148
+C VC + E R ++ C H FH C+ KWLK N TCP+CRA
Sbjct: 462 LCVVCMCDFESRQLLR-VLPCNHEFHAKCVDKWLKANRTCPICRA 505
>sp|Q68DV7|RNF43_HUMAN E3 ubiquitin-protein ligase RNF43 OS=Homo sapiens GN=RNF43 PE=1
SV=1
Length = 783
Score = 51.2 bits (121), Expect = 3e-06, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 104 VCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLC 146
VC +C EE + E R I C+H FH +C+ WL + TCPLC
Sbjct: 271 VCAICLEEFSEGQELRVI-SCLHEFHRNCVDPWLHQHRTCPLC 312
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 35/72 (48%)
Query: 81 LEPTIDPALACTTALSVDGEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKIN 140
L P+I +L T +V + C VC E + R + C H FH CI W +
Sbjct: 52 LNPSIIKSLPIFTFSAVTALFAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSH 111
Query: 141 NTCPLCRATCKP 152
++CPLCR+ +P
Sbjct: 112 SSCPLCRSQIEP 123
>sp|Q9LSW9|ATL16_ARATH RING-H2 finger protein ATL16 OS=Arabidopsis thaliana GN=ATL16 PE=2
SV=1
Length = 375
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 25/44 (56%)
Query: 105 CGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRA 148
C VC E + E + R I C H+FH CI WL+ N CPLCR
Sbjct: 138 CSVCLSEFQDEEKLRIIPNCSHLFHIDCIDVWLQNNANCPLCRT 181
>sp|Q5NCP0|RNF43_MOUSE E3 ubiquitin-protein ligase RNF43 OS=Mus musculus GN=Rnf43 PE=2
SV=1
Length = 784
Score = 50.8 bits (120), Expect = 4e-06, Method: Composition-based stats.
Identities = 20/43 (46%), Positives = 26/43 (60%), Gaps = 1/43 (2%)
Query: 104 VCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLC 146
VC +C EE + E R I C+H FH +C+ WL + TCPLC
Sbjct: 271 VCAICLEEFSEGQELRVI-SCLHEFHRTCVDPWLYQHRTCPLC 312
>sp|O64762|ATL38_ARATH RING-H2 finger protein ATL38 OS=Arabidopsis thaliana GN=ATL38 PE=2
SV=1
Length = 302
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 28/50 (56%)
Query: 99 GEDGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRA 148
G G+ C VC E E R + EC H+FH C+ WL ++TCPLCR
Sbjct: 90 GIGGVECAVCICEFEDHETLRLMPECCHVFHADCVSVWLSDHSTCPLCRV 139
>sp|P0C041|ATL53_ARATH Putative RING-H2 finger protein ATL53 OS=Arabidopsis thaliana
GN=ATL53 PE=3 SV=2
Length = 310
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 101 DGIVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRA 148
+G C +C E ++ R + +C H FH CI +WLK ++ CPLCRA
Sbjct: 151 NGTDCSICLGEFNEDESLRLLPKCNHTFHVVCIDRWLKSHSNCPLCRA 198
>sp|Q8LFY8|ATL54_ARATH RING-H2 finger protein ATL54 OS=Arabidopsis thaliana GN=ATL54 PE=2
SV=2
Length = 413
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 30/52 (57%), Gaps = 4/52 (7%)
Query: 101 DGIV----CGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRA 148
DG++ C VC E E++ R + +C H FH SCI WL + CPLCRA
Sbjct: 169 DGLIERTDCPVCLNEFEEDESLRLLPKCNHAFHISCIDTWLSSHTNCPLCRA 220
>sp|Q9C1X4|YKW3_SCHPO Uncharacterized RING finger protein P32A8.03c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPAP32A8.03c PE=4 SV=1
Length = 513
Score = 50.4 bits (119), Expect = 5e-06, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 105 CGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRATCKP 152
C +C E M K ++ + C H FH++CI WL++N TC +CRA P
Sbjct: 396 CTICME-MFKINDDVIQLPCKHYFHENCIKPWLRVNGTCAICRAPVDP 442
>sp|Q9SRQ8|ATL51_ARATH RING-H2 finger protein ATL51 OS=Arabidopsis thaliana GN=ATL51 PE=2
SV=2
Length = 356
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 101 DGIV----CGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRA 148
DG V C VC E ++ R + +C H FH CI WLK ++ CPLCRA
Sbjct: 151 DGFVESSDCSVCLSEFQENESLRLLPKCNHAFHVPCIDTWLKSHSNCPLCRA 202
>sp|Q9FKX5|NIPL1_ARATH NEP1-interacting protein-like 1 OS=Arabidopsis thaliana GN=ATL27
PE=2 SV=1
Length = 221
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 103 IVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCR 147
+ C VC ++ + R++ C HMFH CI KWL+ + +CPLCR
Sbjct: 174 VSCSVCLQDFQVGETVRSLPHCHHMFHLPCIDKWLRRHASCPLCR 218
>sp|Q9M0R7|ATL39_ARATH RING-H2 finger protein ATL39 OS=Arabidopsis thaliana GN=ATL39 PE=2
SV=1
Length = 132
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 87 PALACTTALSVDGEDG-IVCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPL 145
P+ T A ++ G + C VC E + + R + C+H+FH C+ WL ++TCP+
Sbjct: 66 PSFVYTEARGIEPGIGELECVVCLNEFKDDETLRLVPPCVHVFHADCVDIWLSHSSTCPI 125
Query: 146 CRATCKP 152
CRA P
Sbjct: 126 CRAKVVP 132
>sp|Q8BI21|RNF38_MOUSE RING finger protein 38 OS=Mus musculus GN=Rnf38 PE=2 SV=1
Length = 518
Score = 50.1 bits (118), Expect = 6e-06, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 104 VCGVCQEEMEKEHEARAIMECMHMFHDSCILKWLKINNTCPLCRA 148
+C VC + E R ++ C H FH C+ KWLK N TCP+CRA
Sbjct: 465 LCVVCMCDFESRQLLR-VLPCNHEFHAKCVDKWLKGNRTCPICRA 508
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.132 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 54,646,299
Number of Sequences: 539616
Number of extensions: 1858323
Number of successful extensions: 5542
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 191
Number of HSP's that attempted gapping in prelim test: 5113
Number of HSP's gapped (non-prelim): 584
length of query: 162
length of database: 191,569,459
effective HSP length: 108
effective length of query: 54
effective length of database: 133,290,931
effective search space: 7197710274
effective search space used: 7197710274
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 56 (26.2 bits)