BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046942
(134 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9T039|EC14_ARATH Egg cell-secreted protein 1.4 OS=Arabidopsis thaliana GN=EC1.4 PE=2
SV=1
Length = 127
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/129 (53%), Positives = 85/129 (65%), Gaps = 11/129 (8%)
Query: 3 MALKHVFFILALTCLIMENIANATNRNDHLNNNMKPDYNLAARLEGSGGLTECWNALMAL 62
MA F +T LI+ + N T L + N+AARL+ SGGL ECWNAL L
Sbjct: 1 MASNTTFLFSTVTLLII--LLNTTVSGRDLP--AESSTNIAARLQ-SGGLMECWNALYEL 55
Query: 63 KSCSNEIVIFFLNGQADIGLDCCRAIDTITHNCWPAMLTSLGFTTEEGNILRGYC----- 117
KSC+NEIV+FFLNG+ +G+ CC ++D IT NCWPAMLTSLGFT EE N+LRG+C
Sbjct: 56 KSCTNEIVLFFLNGETKLGVSCCESVDIITTNCWPAMLTSLGFTPEEANVLRGFCQNPNS 115
Query: 118 -DASSAPSP 125
D+S APSP
Sbjct: 116 GDSSPAPSP 124
>sp|Q9SJ24|EC12_ARATH Egg cell-secreted protein 1.2 OS=Arabidopsis thaliana GN=EC1.2 PE=2
SV=1
Length = 125
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 60/117 (51%), Positives = 80/117 (68%), Gaps = 7/117 (5%)
Query: 3 MALKHVFFILALTCLIMENIANATNRNDHLNNNMKPDYNLAARLEGSGGLTECWNALMAL 62
MA F + L++ NI+ T + N+AARL G GGL ECWNAL L
Sbjct: 1 MASNTSFLFATIAILLVLNISGRTLPET------EDSTNIAARLNG-GGLMECWNALYEL 53
Query: 63 KSCSNEIVIFFLNGQADIGLDCCRAIDTITHNCWPAMLTSLGFTTEEGNILRGYCDA 119
KSC+NEIV+FFLNG+ +G+DCC+A++ IT +CWPAMLTSLGFT++E N+LRG+C +
Sbjct: 54 KSCTNEIVLFFLNGETKLGVDCCQAVEVITTDCWPAMLTSLGFTSDETNVLRGFCQS 110
>sp|Q9SJ23|EC13_ARATH Egg cell-secreted protein 1.3 OS=Arabidopsis thaliana GN=EC1.3 PE=2
SV=1
Length = 125
Score = 120 bits (300), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 84/132 (63%), Gaps = 10/132 (7%)
Query: 3 MALKHVFFILALTCLIMENIANATNRNDHLNNNMKPDYNLAARLEGSGGLTECWNALMAL 62
MA F + +T L++ N+++ + N+AARL G GGL +CW+AL L
Sbjct: 1 MASNTSFLFVTVTLLLVLNVSS------RALPPVADSTNIAARLTG-GGLMQCWDALYEL 53
Query: 63 KSCSNEIVIFFLNGQADIGLDCCRAIDTITHNCWPAMLTSLGFTTEEGNILRGYCDASSA 122
KSC+NEIV+FFLNG+ +G CC A+D IT +CWPAMLTSLGFT EE N+LRG+C +
Sbjct: 54 KSCTNEIVLFFLNGETKLGYGCCNAVDVITTDCWPAMLTSLGFTLEETNVLRGFCQ---S 110
Query: 123 PSPGGPAVIYQP 134
P+ GG + P
Sbjct: 111 PNSGGSSPALSP 122
>sp|Q9SRD8|EC11_ARATH Egg cell-secreted protein 1.1 OS=Arabidopsis thaliana GN=EC1.1 PE=2
SV=1
Length = 158
Score = 94.4 bits (233), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 62/112 (55%)
Query: 8 VFFILALTCLIMENIANATNRNDHLNNNMKPDYNLAARLEGSGGLTECWNALMALKSCSN 67
F I+ L ++ + A P +L RL+ CW++LM L+ CS
Sbjct: 10 TFNIVTLMLMVASSTVTARPLMKPSMGTSSPTTSLVYRLKLDEDTGYCWDSLMQLQHCSG 69
Query: 68 EIVIFFLNGQADIGLDCCRAIDTITHNCWPAMLTSLGFTTEEGNILRGYCDA 119
E+++FFLNG+ IG CC AI TI CWP M+ LGFT +EG++L+GYCD
Sbjct: 70 ELILFFLNGETYIGPGCCSAIRTIGRKCWPTMIGVLGFTAQEGDMLQGYCDG 121
>sp|Q9FGG1|EC15_ARATH Egg cell-secreted protein 1.5 OS=Arabidopsis thaliana GN=EC1.5 PE=2
SV=1
Length = 155
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 58/107 (54%), Gaps = 13/107 (12%)
Query: 41 NLAARLEGSGGLTECWNALMALKSCSNEIVIFFLNG--------QADIGLDCCRAIDTIT 92
+A G+G L +CWNA + LKSC++EIV FFL+ + I DCC AI +
Sbjct: 39 KMATDHSGAGNLMDCWNAGLELKSCTDEIVKFFLSQTGTSEPPVKGGIDKDCCGAIGLVV 98
Query: 93 HNCWPAMLTSLGFTTEEGNILRGYCDASS-----APSPGGPAVIYQP 134
+CW M TSLG TT EGN LR YC+ + +PSP + P
Sbjct: 99 KDCWSVMFTSLGLTTMEGNNLREYCEFQAEKSELSPSPAPETLALSP 145
>sp|A4TCS1|DCUP_MYCGI Uroporphyrinogen decarboxylase OS=Mycobacterium gilvum (strain
PYR-GCK) GN=hemE PE=3 SV=1
Length = 354
Score = 34.3 bits (77), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 22/40 (55%), Gaps = 3/40 (7%)
Query: 51 GLTECWNALMALKSCSNEIVIFFLNGQADIGLDCCRAIDT 90
G TE WNALMA ++ I FL Q D G+D + D+
Sbjct: 173 GETETWNALMA---ALTDVTIEFLRVQLDAGVDAIQVFDS 209
>sp|A1UF48|DCUP_MYCSK Uroporphyrinogen decarboxylase OS=Mycobacterium sp. (strain KMS)
GN=hemE PE=3 SV=1
Length = 354
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 51 GLTECWNALMALKSCSNEIVIFFLNGQADIGLDCCRAIDT 90
G + W+ALM S ++ I FL Q D G+D + D+
Sbjct: 173 GAPDTWHALM---SALTDVTIAFLQAQVDAGVDAIQVFDS 209
>sp|A3PYL0|DCUP_MYCSJ Uroporphyrinogen decarboxylase OS=Mycobacterium sp. (strain JLS)
GN=hemE PE=3 SV=1
Length = 354
Score = 32.3 bits (72), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 51 GLTECWNALMALKSCSNEIVIFFLNGQADIGLDCCRAIDT 90
G + W+ALM S ++ I FL Q D G+D + D+
Sbjct: 173 GAPDTWHALM---SALTDVTIAFLQAQVDAGVDAIQVFDS 209
>sp|A1T7Z4|DCUP_MYCVP Uroporphyrinogen decarboxylase OS=Mycobacterium vanbaalenii (strain
DSM 7251 / PYR-1) GN=hemE PE=3 SV=1
Length = 354
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 3/40 (7%)
Query: 51 GLTECWNALMALKSCSNEIVIFFLNGQADIGLDCCRAIDT 90
G T W+ALM + +I I FL Q D G+D + D+
Sbjct: 173 GETATWHALM---TALTDITIAFLRAQVDAGVDAIQVFDS 209
>sp|Q6YRK2|RL9_ONYPE 50S ribosomal protein L9 OS=Onion yellows phytoplasma (strain
OY-M) GN=rplI PE=3 SV=2
Length = 849
Score = 31.2 bits (69), Expect = 1.9, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 8 VFFILALTCLIMENIANATNRNDHLNNNMKPDYNLAARLEG 48
V IL L CL +NI + L NN P N A+ + G
Sbjct: 19 VVLILILFCLDFQNIQEIIETINQLTNNQNPSQNTASEMSG 59
>sp|Q47BL9|OTC_DECAR Ornithine carbamoyltransferase OS=Dechloromonas aromatica (strain
RCB) GN=argF PE=3 SV=1
Length = 306
Score = 30.0 bits (66), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 4/37 (10%)
Query: 82 LDCCRAIDTITHNCWPAMLTSLGFTTEEGNILRGYCD 118
+D CR D +T + W TS+GF E ++ + D
Sbjct: 208 MDACRGADLVTTDVW----TSMGFEAENEERIKAFAD 240
>sp|Q2NKC0|RL9_AYWBP 50S ribosomal protein L9 OS=Aster yellows witches'-broom
phytoplasma (strain AYWB) GN=rplI PE=3 SV=1
Length = 849
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 8 VFFILALTCLIMENIANATNRNDHLNNNMKPDYNLAARLEG 48
V IL L C +NI + L NN P N A+ + G
Sbjct: 19 VVLILILFCFDFQNIQEIIETINQLTNNQNPSKNTASEMSG 59
>sp|Q59935|MANA_STRMU Mannose-6-phosphate isomerase OS=Streptococcus mutans serotype c
(strain ATCC 700610 / UA159) GN=pmi PE=3 SV=2
Length = 316
Score = 28.9 bits (63), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 29 NDHLNNNMKPDYNLAARLEGSGGLTECWNALMA 61
ND L+ + PD A EG G TECW + A
Sbjct: 89 NDWLSVQVHPDNAYALEHEGELGKTECWYVISA 121
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.434
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,206,775
Number of Sequences: 539616
Number of extensions: 1742270
Number of successful extensions: 4760
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 4742
Number of HSP's gapped (non-prelim): 23
length of query: 134
length of database: 191,569,459
effective HSP length: 100
effective length of query: 34
effective length of database: 137,607,859
effective search space: 4678667206
effective search space used: 4678667206
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)