BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046946
(650 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|359386146|gb|AEV43362.1| poly C-binding protein [Citrus sinensis]
Length = 569
Score = 1181 bits (3055), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 569/569 (100%), Positives = 569/569 (100%)
Query: 82 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 141
MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG
Sbjct: 1 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 60
Query: 142 VIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 201
VIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE
Sbjct: 61 VIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 120
Query: 202 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV 261
SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV
Sbjct: 121 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV 180
Query: 262 IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKP 321
IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKP
Sbjct: 181 IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKP 240
Query: 322 PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSG 381
PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSG
Sbjct: 241 PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSG 300
Query: 382 SINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD 441
SINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD
Sbjct: 301 SINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD 360
Query: 442 ERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHV 501
ERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHV
Sbjct: 361 ERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHV 420
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMK 561
INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMK
Sbjct: 421 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMK 480
Query: 562 VQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSYPMHT 621
VQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSYPMHT
Sbjct: 481 VQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSYPMHT 540
Query: 622 HQGAGTNPHITPTQSSYYSSSAQQGTYPY 650
HQGAGTNPHITPTQSSYYSSSAQQGTYPY
Sbjct: 541 HQGAGTNPHITPTQSSYYSSSAQQGTYPY 569
>gi|147790774|emb|CAN72739.1| hypothetical protein VITISV_027256 [Vitis vinifera]
Length = 668
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 331/455 (72%), Positives = 371/455 (81%), Gaps = 10/455 (2%)
Query: 61 ISFSCAFHLLSHSRCIRFCCIMDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSF 120
+ FS F L F M+ +R FKKRPN QFKRKG K+G W+NSS EQSF
Sbjct: 15 VHFSVFFSPL-------FWGSMEGXRRGSFKKRPNFQFKRKG--SNKRGRWNNSSHEQSF 65
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
GNSQ ADTVYRILCPS+KIGGVIGK G IVK+LREETQAKITVAD++PGS+ERVIIIYS+
Sbjct: 66 GNSQVADTVYRILCPSKKIGGVIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSA 125
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
PTK K N ++D E +++ MEPHC AQDAL+KVH+RIIEEDLFGG +DDNEN+ +
Sbjct: 126 PTKNPKEHNSNEDPEREEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVV 185
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA+ LP CAM++DE+VQISGKP V
Sbjct: 186 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAV 245
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
AK+ALYEVSTLLHQNPRKDKPPSSFP ++GGQ FH P A M +M P GN W RNS+
Sbjct: 246 AKKALYEVSTLLHQNPRKDKPPSSFPMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQ 305
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNV 420
G+P PWMGGY QPS + G + G GE S EFSMKILC AGKIGGVIGKGGFNV
Sbjct: 306 GVPPMPWMGGYRSQPSVV-PGGFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNV 364
Query: 421 KQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
KQLQQETGASIHVEDA +S+ERVIR S+FE LWNPRSQTI+AILQLQNKTSE+S+KG +
Sbjct: 365 KQLQQETGASIHVEDALAESEERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGGM 424
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV
Sbjct: 425 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 459
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 103/324 (31%), Positives = 148/324 (45%), Gaps = 57/324 (17%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
+ILCP+ KIGGVIGK G VK L++ET A I V D + SEERVI + S
Sbjct: 345 KILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESEERVIRVSSF---------- 394
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ P +A+L++ ++ E GGM T RLLVP++
Sbjct: 395 ---------EALWNPRSQTIEAILQLQNKTSEYSDKGGM-----------TTRLLVPSSK 434
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
VGC+LG+ G VI +R T A+IRV + P CA + +E+VQISG VAK AL E+++
Sbjct: 435 VGCILGQGGHVINEMRRRTQADIRVYSKEDKPKCASDDEELVQISGNFGVAKDALAEIAS 494
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN-----SSWPARNSSLHGMPST 365
L +D A GG PAP+ + G+ P+ + +L S
Sbjct: 495 RLRVRCLRD--------ANGGVE----PAPVGPVPGFGHPGKLPGGLPSSSGALGAGSSG 542
Query: 366 PWM----GGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVK 421
+ GG +P PP G + SM+ + VIG GG NV
Sbjct: 543 GFELSKGGGLEYEPQSY------PVPPAATGYHNVNSSMESKIPNNSVSSVIGMGGGNVA 596
Query: 422 QLQQETGASIHVEDAPTDSDERVI 445
+ + GA + ++D + E V+
Sbjct: 597 NMSEMAGARVKLQDPQSGGSECVV 620
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 13/98 (13%)
Query: 486 VPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLIS 545
+P++ V ++G GG + M + GARVKLQDP G SEC+V+IRGSSEHL +
Sbjct: 579 IPNNSVSSVIGMGGGNVANMSE-------MAGARVKLQDPQSGGSECVVEIRGSSEHLTA 631
Query: 546 AHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQTMSSH 583
A Q+FM S + QN+NPQQ S Q MS+H
Sbjct: 632 AQSILQAFMASAG------AGGQNMNPQQGSYQNMSAH 663
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/153 (36%), Positives = 78/153 (50%), Gaps = 30/153 (19%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI---------- 445
A+ +ILC + KIGGVIGKGG VK L++ET A I V D+ SDERVI
Sbjct: 71 ADTVYRILCPSKKIGGVIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNP 130
Query: 446 ---------RASAFEGLWNPRSQTIDAILQLQNKT--------SEF---SEKGTITTRLL 485
+ P DA++++ + +EF +E +T RLL
Sbjct: 131 KEHNSNEDPEREEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLL 190
Query: 486 VPSSKVGCILGQGGHVINEMRRRTQADIRVVGA 518
VP++ VGC+LG+ G VI +R T A+IRV+ A
Sbjct: 191 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA 223
>gi|359488265|ref|XP_003633728.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
gi|296087281|emb|CBI33655.3| unnamed protein product [Vitis vinifera]
Length = 676
Score = 609 bits (1571), Expect = e-171, Method: Compositional matrix adjust.
Identities = 325/434 (74%), Positives = 366/434 (84%), Gaps = 3/434 (0%)
Query: 82 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 141
M+ ++R FKKRPN QFKRKG K+G W+NSS EQSFGNSQ ADTVYRILCPS+KIGG
Sbjct: 1 MEGTRRGSFKKRPNFQFKRKG--SNKRGRWNNSSHEQSFGNSQVADTVYRILCPSKKIGG 58
Query: 142 VIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 201
VIGK G IVK+LREETQAKITVAD++PGS+ERVIIIYS+PTK K + ++D E +++
Sbjct: 59 VIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNPKEHDSNEDPEMEEEQD 118
Query: 202 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV 261
MEPHC AQDAL+KVH+RIIEEDLFGG +DDNEN+ +TARLLVPNNMVGCLLGKRGDV
Sbjct: 119 HMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLLVPNNMVGCLLGKRGDV 178
Query: 262 IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKP 321
IQRLRSETGANIRVLPA+ LP CAM++DE+VQISGKP VAK+ALYEVSTLLHQNPRKDKP
Sbjct: 179 IQRLRSETGANIRVLPAEHLPTCAMSSDELVQISGKPAVAKKALYEVSTLLHQNPRKDKP 238
Query: 322 PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSG 381
PSSFP ++GGQ FH P A M +M P GN W RNS+ G+P PWMGGY QPS + G
Sbjct: 239 PSSFPMSFGGQGFHPPGASMGNMPPPGNPMWSNRNSNSQGVPPMPWMGGYRSQPSVV-PG 297
Query: 382 SINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD 441
+ G GE S EFSMKILC AGKIGGVIGKGGFNVKQLQQETGASIHVEDA +S+
Sbjct: 298 GFDGVHAGHGGEASGEFSMKILCPAGKIGGVIGKGGFNVKQLQQETGASIHVEDALAESE 357
Query: 442 ERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHV 501
ERVIR S+FE LWNPRSQTI+AILQLQNKTSE+S+KG +TTRLLVPSSKVGCILGQGGHV
Sbjct: 358 ERVIRVSSFEALWNPRSQTIEAILQLQNKTSEYSDKGGMTTRLLVPSSKVGCILGQGGHV 417
Query: 502 INEMRRRTQADIRV 515
INEMRRRTQADIRV
Sbjct: 418 INEMRRRTQADIRV 431
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 63/137 (45%), Positives = 82/137 (59%), Gaps = 18/137 (13%)
Query: 486 VPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLIS 545
+P++ V ++G GG + M + GARVKLQDP G SEC+V+IRGSSEHL +
Sbjct: 551 IPNNSVSSVIGMGGGNVANMSE-------MAGARVKLQDPQSGGSECVVEIRGSSEHLTA 603
Query: 546 AHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQTMSSH-QSSYQNMNT-QQSPYHRVNA- 602
A Q+FM S + QN+NPQQ S Q MS+H Q+ YQNMN Q PY +NA
Sbjct: 604 AQSILQAFMASAG------AGGQNMNPQQGSYQNMSAHPQAPYQNMNAPPQVPYQSMNAP 657
Query: 603 --QQSPYQNINPQQSSY 617
Q + Y N++ QQSSY
Sbjct: 658 PQQAAAYPNMSAQQSSY 674
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 109/354 (30%), Positives = 157/354 (44%), Gaps = 67/354 (18%)
Query: 102 GVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKI 161
G G+ G+ +S E S +ILCP+ KIGGVIGK G VK L++ET A I
Sbjct: 298 GFDGVHAGHGGEASGEFSM----------KILCPAGKIGGVIGKGGFNVKQLQQETGASI 347
Query: 162 TVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRII 221
V D + SEERVI + S + P +A+L++ ++
Sbjct: 348 HVEDALAESEERVIRVSSF-------------------EALWNPRSQTIEAILQLQNKTS 388
Query: 222 EEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRL 281
E GGM T RLLVP++ VGC+LG+ G VI +R T A+IRV +
Sbjct: 389 EYSDKGGM-----------TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVYSKEDK 437
Query: 282 PPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPM 341
P CA + +E+VQISG VAK AL E+++ L +D A GG PAP+
Sbjct: 438 PKCASDDEELVQISGNFGVAKDALAEIASRLRVRCLRD--------ANGGVE----PAPV 485
Query: 342 ADMHPLGN-----SSWPARNSSLHGMPSTPWM----GGYGDQPSRMGSGSINSCPPGQMG 392
+ G+ P+ + +L S + GG +P PP G
Sbjct: 486 GPVPGFGHPGKLPGGLPSSSGALGAGSSGGFELSKGGGLEYEPQSY------PVPPAATG 539
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
+ SM+ + VIG GG NV + + GA + ++D + E V+
Sbjct: 540 YHNVNSSMESKIPNNSVSSVIGMGGGNVANMSEMAGARVKLQDPQSGGSECVVE 593
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/154 (36%), Positives = 78/154 (50%), Gaps = 30/154 (19%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI---------- 445
A+ +ILC + KIGGVIGKGG VK L++ET A I V D+ SDERVI
Sbjct: 43 ADTVYRILCPSKKIGGVIGKGGGIVKALREETQAKITVADSVPGSDERVIIIYSAPTKNP 102
Query: 446 ---------RASAFEGLWNPRSQTIDAILQLQNKT--------SEF---SEKGTITTRLL 485
+ P DA++++ + +EF +E +T RLL
Sbjct: 103 KEHDSNEDPEMEEEQDHMEPHCPAQDALMKVHERIIEEDLFGGTEFEDDNENTVVTARLL 162
Query: 486 VPSSKVGCILGQGGHVINEMRRRTQADIRVVGAR 519
VP++ VGC+LG+ G VI +R T A+IRV+ A
Sbjct: 163 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAE 196
>gi|255551350|ref|XP_002516721.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223544094|gb|EEF45619.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 537
Score = 607 bits (1566), Expect = e-171, Method: Compositional matrix adjust.
Identities = 329/434 (75%), Positives = 360/434 (82%), Gaps = 4/434 (0%)
Query: 82 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 141
MD +KRN FKK NNQFKRKGV +KG W+NS RE+S GN P DTVYRILCPSRKIGG
Sbjct: 1 MDGNKRNVFKKYQNNQFKRKGVT--RKGKWNNSGREESSGNPLPVDTVYRILCPSRKIGG 58
Query: 142 VIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 201
VIGK G I+K LREETQAKITVAD +PGS+ERVIIIYSSP KI++ N +D E +++
Sbjct: 59 VIGKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKISRNHNDHEDLTMENEQD 118
Query: 202 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV 261
MEP+CAAQDALLKVHDRI+EEDLFGGM SDDDNEN +TARLLVPNNMVGCLLGKRGDV
Sbjct: 119 IMEPYCAAQDALLKVHDRIVEEDLFGGMTSDDDNENGFVTARLLVPNNMVGCLLGKRGDV 178
Query: 262 IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKP 321
IQRLRSETGANIRVLPAD LP CAM+TDE+VQIS KP+VAK+ALYEVSTLLHQNPRKDKP
Sbjct: 179 IQRLRSETGANIRVLPADHLPTCAMSTDELVQISAKPDVAKKALYEVSTLLHQNPRKDKP 238
Query: 322 PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSG 381
P S P Y GQ+FH P PM ++ PLG+ WP NSS H +P P MG YG Q S G G
Sbjct: 239 P-SVPMPYSGQSFHPPGGPMKNLPPLGSPMWPHHNSS-HSIPPMPIMGRYGSQSSGFGPG 296
Query: 382 SINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD 441
+ P G + E SAEFSMKILCSAGKIGGVIGKGG NVK +QQ+TGASIHVEDA +SD
Sbjct: 297 GFDDVPRGHVAEPSAEFSMKILCSAGKIGGVIGKGGSNVKVVQQDTGASIHVEDASAESD 356
Query: 442 ERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHV 501
ERVIR SA E LWNPRSQTIDAILQLQNKTS+FSEKGTITTRLLVPSSKVGCILGQGG V
Sbjct: 357 ERVIRVSASEALWNPRSQTIDAILQLQNKTSDFSEKGTITTRLLVPSSKVGCILGQGGQV 416
Query: 502 INEMRRRTQADIRV 515
INEMRRRTQADIRV
Sbjct: 417 INEMRRRTQADIRV 430
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 105/194 (54%), Gaps = 30/194 (15%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A+ +ILC + KIGGVIGK G+ VK ++++T A I V D S+ERVI +
Sbjct: 311 AEFSMKILCSAGKIGGVIGKGGSNVKVVQQDTGASIHVEDASAESDERVIRV-------- 362
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
SA+E P DA+L++ ++ + D +E TIT RLL
Sbjct: 363 --------SASEAL---WNPRSQTIDAILQLQNK-----------TSDFSEKGTITTRLL 400
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP++ VGC+LG+ G VI +R T A+IRV D P CA +E+VQISGK VAK AL
Sbjct: 401 VPSSKVGCILGQGGQVINEMRRRTQADIRVYSKDEKPKCASEDEELVQISGKFGVAKDAL 460
Query: 306 YEVSTLLHQNPRKD 319
E+++ L +D
Sbjct: 461 AEIASRLRVRTLRD 474
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/148 (39%), Positives = 78/148 (52%), Gaps = 30/148 (20%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI-----------RASA 449
+ILC + KIGGVIGKGG +K L++ET A I V D SDERVI +
Sbjct: 48 RILCPSRKIGGVIGKGGGIIKGLREETQAKITVADPVPGSDERVIIIYSSPEKISRNHND 107
Query: 450 FEGLWNPRSQTI--------DAILQLQNKTSEF-----------SEKGTITTRLLVPSSK 490
E L Q I DA+L++ ++ E +E G +T RLLVP++
Sbjct: 108 HEDLTMENEQDIMEPYCAAQDALLKVHDRIVEEDLFGGMTSDDDNENGFVTARLLVPNNM 167
Query: 491 VGCILGQGGHVINEMRRRTQADIRVVGA 518
VGC+LG+ G VI +R T A+IRV+ A
Sbjct: 168 VGCLLGKRGDVIQRLRSETGANIRVLPA 195
>gi|224127654|ref|XP_002329331.1| predicted protein [Populus trichocarpa]
gi|222870785|gb|EEF07916.1| predicted protein [Populus trichocarpa]
Length = 563
Score = 583 bits (1504), Expect = e-164, Method: Compositional matrix adjust.
Identities = 325/470 (69%), Positives = 362/470 (77%), Gaps = 20/470 (4%)
Query: 82 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 141
MD ++R +FKK NN FKRKGV +KG WS+S E+ G+ DTVYRILCPSRKIGG
Sbjct: 1 MDGNRRKYFKKPGNNLFKRKGVSSSRKGKWSDSHGEECSGD---GDTVYRILCPSRKIGG 57
Query: 142 VIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD-SAAETKK 200
VIGK GNIVK+LREETQ+KITVAD++ GS+ERVIIIYSS K + + D+ A ++
Sbjct: 58 VIGKGGNIVKALREETQSKITVADSVQGSDERVIIIYSSSDKPPRKMDGDEGLPAGNGQQ 117
Query: 201 ESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGD 260
E+ EPHCAAQDALLKVHDRI+EEDLFGGMASDDDN+N+ +TARLLVPNNMVGC+LGKRGD
Sbjct: 118 EAFEPHCAAQDALLKVHDRIVEEDLFGGMASDDDNDNNVVTARLLVPNNMVGCVLGKRGD 177
Query: 261 VIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK 320
VIQRLRSETGANIRVLPAD LP CAM+TDE+VQISGKP VAKRALYE+S LLHQNPRKDK
Sbjct: 178 VIQRLRSETGANIRVLPADHLPSCAMDTDELVQISGKPAVAKRALYEISILLHQNPRKDK 237
Query: 321 PPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGS 380
PS P YGG+ FH P MA+M P GN WP RNS+ H MP WMG YG+ PS G
Sbjct: 238 LPS-VPMPYGGRTFHPPSDSMANMLPPGNPMWPHRNSTPHSMP---WMGEYGNHPSEFGP 293
Query: 381 GSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS 440
G N PPG E SAEFSMKILCS GKIGGVIGKGG NVK +QQETGASIHVEDA +S
Sbjct: 294 GGFNGVPPGHGREPSAEFSMKILCSTGKIGGVIGKGGSNVKIVQQETGASIHVEDASAES 353
Query: 441 DERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGH 500
+ER IR SAFEGLWNPRSQTIDAILQLQ+KTS+FSEKG I TRLLVPSSKVGCILGQGG
Sbjct: 354 EERAIRVSAFEGLWNPRSQTIDAILQLQDKTSDFSEKGMIITRLLVPSSKVGCILGQGGQ 413
Query: 501 VINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY 550
VINEMRRR QADIRV P +C D E L+ G Y
Sbjct: 414 VINEMRRRLQADIRVY--------PKNDKPKCASD----DEELVQISGNY 451
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 86/251 (34%), Positives = 117/251 (46%), Gaps = 41/251 (16%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
G A+ +ILC + KIGGVIGK G+ VK +++ET A I V D SEER I +
Sbjct: 304 GREPSAEFSMKILCSTGKIGGVIGKGGSNVKIVQQETGASIHVEDASAESEERAIRV--- 360
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
SA E P DA+L++ D+ + D +E I
Sbjct: 361 -------------SAFEGL---WNPRSQTIDAILQLQDK-----------TSDFSEKGMI 393
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
RLLVP++ VGC+LG+ G VI +R A+IRV P + P CA + +E+VQISG V
Sbjct: 394 ITRLLVPSSKVGCILGQGGQVINEMRRRLQADIRVYPKNDKPKCASDDEELVQISGNYGV 453
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
AK AL E+++ L +D + P P P+ P N P R
Sbjct: 454 AKDALAEIASRLRARTLRDANAGTEP---------GPAGPVPGFGPARN--LPGRGPQPS 502
Query: 361 GMPSTPWMGGY 371
GM + GGY
Sbjct: 503 GMMAASSSGGY 513
>gi|125532489|gb|EAY79054.1| hypothetical protein OsI_34164 [Oryza sativa Indica Group]
gi|125575260|gb|EAZ16544.1| hypothetical protein OsJ_32017 [Oryza sativa Japonica Group]
Length = 769
Score = 346 bits (887), Expect = 3e-92, Method: Compositional matrix adjust.
Identities = 204/454 (44%), Positives = 282/454 (62%), Gaps = 47/454 (10%)
Query: 69 LLSHSRCIRFCCIMDASKRNFFKKRPN---NQFKRKGVVGIKKGNWSNSSREQSFGNSQP 125
L+ H R R K N +KRP+ + KRK + NS + +S+P
Sbjct: 7 LMDHDRSRRH-------KSNTSRKRPHFNSDDGKRKRL---------NSRHDDGTISSEP 50
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIII--YSSPTK 183
+T+YRILCP +KIG V+G+ G+IVK+LR+ T+AKI VAD+IPG++ERVIII YSS T+
Sbjct: 51 IETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTE 110
Query: 184 IAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRII-EEDLFGGMASDDDNENSTITA 242
A QN D E M+PHC AQDALLK+HD+I +EDL G+ + + A
Sbjct: 111 EA-AQNISTDGF-----EDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIA 164
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
R+LVP N VGCLLGK G +IQ+LR++TGA IRVLP++ LP CA+ +DE+VQISG ++ +
Sbjct: 165 RILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVR 224
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
+ALYE+ST LHQ+PRKD PP Q H P + P N P + +
Sbjct: 225 KALYEISTRLHQHPRKDNPPLEEIIDASTQRKHQAPPQL----PHANPMLP--HLHVDHS 278
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
P P + Y ++P + S + EFS+KILC++ IG VIGK G NV+Q
Sbjct: 279 PQIPLLDPYRNRPLQYHSAE------------AEEFSIKILCASEHIGQVIGKSGGNVRQ 326
Query: 423 LQQETGASIHVEDAPTD-SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
++Q+TGA + V++ + S+ER+I S+ E +P S TI+A++ L +K S +E +T
Sbjct: 327 VEQQTGACVQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLT 386
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
TRL+VPS+KVGCI+G+GG VI EMRRRT A+IRV
Sbjct: 387 TRLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRV 420
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 117/248 (47%), Gaps = 45/248 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP-GSEERVIIIYSSPTKIAKTQN 189
+ILC S IG VIGK+G V+ + ++T A + V + SEER+I++ S Q
Sbjct: 305 KILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSS--------QE 356
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
DD + T +AL+ +H ++ +A EN +T RL+VP+N
Sbjct: 357 IPDDPVSPTI-----------EALILLHSKV------STLA-----ENHHLTTRLVVPSN 394
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VGC++G+ G VI +R TGA IRV P +E+VQ++G P +A+ AL E++
Sbjct: 395 KVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIA 454
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP--STPW 367
+ L +D S+ P + F PP + P R L+G S P+
Sbjct: 455 SRLRTRTLRDGSSSNNPTPFA--PFDGPPVDI----------LPNREFMLYGRSANSPPY 502
Query: 368 MGGYGDQP 375
G D P
Sbjct: 503 GGPPNDPP 510
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 82/168 (48%), Gaps = 35/168 (20%)
Query: 376 SRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
SR G+I+S P E +ILC KIG V+G+GG VK L+ T A I V D
Sbjct: 39 SRHDDGTISSEP--------IETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVAD 90
Query: 436 APTDSDERVIRASAFEGLWNPRSQTI---------------DAILQLQNKTS-------- 472
+ +DERVI + +Q I DA+L++ +K +
Sbjct: 91 SIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAG 150
Query: 473 ---EFSEK-GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
E SE + R+LVP ++VGC+LG+GG +I ++R T A IRV+
Sbjct: 151 IVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVL 198
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 486 VPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLIS 545
+P+S + ++G GG + E+R+ + GARVKL + HPGSSE IV+I+G + + +
Sbjct: 689 IPNSYLESVIGAGGVNLAEIRQ-------ISGARVKLHEAHPGSSESIVEIQGIPDQVKA 741
Query: 546 AHGTYQSFMTSGQSMKVQPSS 566
A Q F+ + + + P S
Sbjct: 742 AQSLLQGFIGASSNSRQAPQS 762
>gi|115482708|ref|NP_001064947.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|22128716|gb|AAM92828.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|110289325|gb|ABB47821.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639556|dbj|BAF26861.1| Os10g0495000 [Oryza sativa Japonica Group]
gi|215694845|dbj|BAG90036.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 762
Score = 344 bits (882), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 200/437 (45%), Positives = 277/437 (63%), Gaps = 40/437 (9%)
Query: 86 KRNFFKKRPN---NQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGV 142
K N +KRP+ + KRK + NS + +S+P +T+YRILCP +KIG V
Sbjct: 10 KSNTSRKRPHFNSDDGKRKRL---------NSRHDDGTISSEPIETIYRILCPVKKIGSV 60
Query: 143 IGKAGNIVKSLREETQAKITVADTIPGSEERVIII--YSSPTKIAKTQNKDDDSAAETKK 200
+G+ G+IVK+LR+ T+AKI VAD+IPG++ERVIII YSS T+ A QN D
Sbjct: 61 LGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEA-AQNISTDGF----- 114
Query: 201 ESMEPHCAAQDALLKVHDRII-EEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRG 259
E M+PHC AQDALLK+HD+I +EDL G+ + + AR+LVP N VGCLLGK G
Sbjct: 115 EDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGG 174
Query: 260 DVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKD 319
+IQ+LR++TGA IRVLP++ LP CA+ +DE+VQISG ++ ++ALYE+ST LHQ+PRKD
Sbjct: 175 SIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKD 234
Query: 320 KPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMG 379
PP Q H P + P N P + + P P + Y ++P +
Sbjct: 235 NPPLEEIIDASTQRKHQAPPQL----PHANPMLP--HLHVDHSPQIPLLDPYRNRPLQYH 288
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
S + EFS+KILC++ IG VIGK G NV+Q++Q+TGA + V++ +
Sbjct: 289 SAE------------AEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKN 336
Query: 440 -SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQG 498
S+ER+I S+ E +P S TI+A++ L +K S +E +TTRL+VPS+KVGCI+G+G
Sbjct: 337 ASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNKVGCIIGEG 396
Query: 499 GHVINEMRRRTQADIRV 515
G VI EMRRRT A+IRV
Sbjct: 397 GKVITEMRRRTGAEIRV 413
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 117/248 (47%), Gaps = 45/248 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP-GSEERVIIIYSSPTKIAKTQN 189
+ILC S IG VIGK+G V+ + ++T A + V + SEER+I++ S Q
Sbjct: 298 KILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEERLIVVSS--------QE 349
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
DD + T +AL+ +H ++ +A EN +T RL+VP+N
Sbjct: 350 IPDDPVSPTI-----------EALILLHSKV------STLA-----ENHHLTTRLVVPSN 387
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VGC++G+ G VI +R TGA IRV P +E+VQ++G P +A+ AL E++
Sbjct: 388 KVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQVAGLPAIARGALTEIA 447
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP--STPW 367
+ L +D S+ P + F PP + P R L+G S P+
Sbjct: 448 SRLRTRTLRDGSSSNNPTPFA--PFDGPPVDI----------LPNREFMLYGRSANSPPY 495
Query: 368 MGGYGDQP 375
G D P
Sbjct: 496 GGPPNDPP 503
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 82/168 (48%), Gaps = 35/168 (20%)
Query: 376 SRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
SR G+I+S P E +ILC KIG V+G+GG VK L+ T A I V D
Sbjct: 32 SRHDDGTISSEP--------IETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVAD 83
Query: 436 APTDSDERVIRASAFEGLWNPRSQTI---------------DAILQLQNKTS-------- 472
+ +DERVI + +Q I DA+L++ +K +
Sbjct: 84 SIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAG 143
Query: 473 ---EFSEK-GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
E SE + R+LVP ++VGC+LG+GG +I ++R T A IRV+
Sbjct: 144 IVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVL 191
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 486 VPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLIS 545
+P+S + ++G GG + E+R+ + GARVKL + HPGSSE IV+I+G + + +
Sbjct: 682 IPNSYLESVIGAGGVNLAEIRQ-------ISGARVKLHEAHPGSSESIVEIQGIPDQVKA 734
Query: 546 AHGTYQSFMTSGQSMKVQPSS 566
A Q F+ + + + P S
Sbjct: 735 AQSLLQGFIGASSNSRQAPQS 755
>gi|110289326|gb|AAP54423.2| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 677
Score = 344 bits (882), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 200/437 (45%), Positives = 277/437 (63%), Gaps = 40/437 (9%)
Query: 86 KRNFFKKRPN---NQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGV 142
K N +KRP+ + KRK + NS + +S+P +T+YRILCP +KIG V
Sbjct: 10 KSNTSRKRPHFNSDDGKRKRL---------NSRHDDGTISSEPIETIYRILCPVKKIGSV 60
Query: 143 IGKAGNIVKSLREETQAKITVADTIPGSEERVIII--YSSPTKIAKTQNKDDDSAAETKK 200
+G+ G+IVK+LR+ T+AKI VAD+IPG++ERVIII YSS T+ A QN D
Sbjct: 61 LGRGGDIVKALRDTTKAKIRVADSIPGADERVIIIFNYSSQTEEA-AQNISTDGF----- 114
Query: 201 ESMEPHCAAQDALLKVHDRII-EEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRG 259
E M+PHC AQDALLK+HD+I +EDL G+ + + AR+LVP N VGCLLGK G
Sbjct: 115 EDMKPHCFAQDALLKIHDKIAADEDLHAGIVHEKSENVDDVIARILVPGNQVGCLLGKGG 174
Query: 260 DVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKD 319
+IQ+LR++TGA IRVLP++ LP CA+ +DE+VQISG ++ ++ALYE+ST LHQ+PRKD
Sbjct: 175 SIIQQLRNDTGAGIRVLPSENLPQCALKSDELVQISGSSSLVRKALYEISTRLHQHPRKD 234
Query: 320 KPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMG 379
PP Q H P + P N P + + P P + Y ++P +
Sbjct: 235 NPPLEEIIDASTQRKHQAPPQL----PHANPMLP--HLHVDHSPQIPLLDPYRNRPLQYH 288
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
S + EFS+KILC++ IG VIGK G NV+Q++Q+TGA + V++ +
Sbjct: 289 SAE------------AEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKN 336
Query: 440 -SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQG 498
S+ER+I S+ E +P S TI+A++ L +K S +E +TTRL+VPS+KVGCI+G+G
Sbjct: 337 ASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHHLTTRLVVPSNKVGCIIGEG 396
Query: 499 GHVINEMRRRTQADIRV 515
G VI EMRRRT A+IRV
Sbjct: 397 GKVITEMRRRTGAEIRV 413
Score = 92.8 bits (229), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 78/264 (29%), Positives = 124/264 (46%), Gaps = 45/264 (17%)
Query: 115 SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT-IPGSEER 173
+R + +++ + +ILC S IG VIGK+G V+ + ++T A + V + SEER
Sbjct: 282 NRPLQYHSAEAEEFSIKILCASEHIGQVIGKSGGNVRQVEQQTGACVQVKEVGKNASEER 341
Query: 174 VIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD 233
+I++ S Q DD + T +AL+ +H ++ +A
Sbjct: 342 LIVVSS--------QEIPDDPVSPTI-----------EALILLHSKV------STLA--- 373
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
EN +T RL+VP+N VGC++G+ G VI +R TGA IRV P +E+VQ
Sbjct: 374 --ENHHLTTRLVVPSNKVGCIIGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQ 431
Query: 294 ISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWP 353
++G P +A+ AL E+++ L +D S+ P + F PP + P
Sbjct: 432 VAGLPAIARGALTEIASRLRTRTLRDGSSSNNPTPFAP--FDGPPVDI----------LP 479
Query: 354 ARNSSLHGMP--STPWMGGYGDQP 375
R L+G S P+ G D P
Sbjct: 480 NREFMLYGRSANSPPYGGPPNDPP 503
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/168 (33%), Positives = 82/168 (48%), Gaps = 35/168 (20%)
Query: 376 SRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
SR G+I+S P E +ILC KIG V+G+GG VK L+ T A I V D
Sbjct: 32 SRHDDGTISSEP--------IETIYRILCPVKKIGSVLGRGGDIVKALRDTTKAKIRVAD 83
Query: 436 APTDSDERVIRASAFEGLWNPRSQTI---------------DAILQLQNKTS-------- 472
+ +DERVI + +Q I DA+L++ +K +
Sbjct: 84 SIPGADERVIIIFNYSSQTEEAAQNISTDGFEDMKPHCFAQDALLKIHDKIAADEDLHAG 143
Query: 473 ---EFSEK-GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
E SE + R+LVP ++VGC+LG+GG +I ++R T A IRV+
Sbjct: 144 IVHEKSENVDDVIARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRVL 191
>gi|357146815|ref|XP_003574121.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 777
Score = 337 bits (864), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 190/406 (46%), Positives = 260/406 (64%), Gaps = 22/406 (5%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEE 172
NS + +SQP +TVYRILCP +KIG V+G+ G+IVK+LREET+AKI VAD+IPG+EE
Sbjct: 31 NSRHDDGPMSSQPIETVYRILCPGKKIGSVLGRGGHIVKALREETKAKIRVADSIPGAEE 90
Query: 173 RVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI-IEEDLFGGMAS 231
RVIII+ + +T + + E+M+ C AQDALLK+HD+I ED G
Sbjct: 91 RVIIIFDYQDQSEQTDEAAQNISNNDGSENMKLQCFAQDALLKIHDKISTHEDPHDGAIH 150
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
+ + +TAR+LVP N VGCLLGK G +IQ+LR++TGA IR+LP+ LP CA+ +DE+
Sbjct: 151 EKSETAADVTARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRILPSQDLPQCALQSDEL 210
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDKPP-SSFPQAYGGQNFHSPPAPMADMHPLGNS 350
VQISG P++ ++ALYE+ST LHQ+PRK+ PP A + SPP PL +
Sbjct: 211 VQISGAPSLVRKALYEISTRLHQHPRKENPPLEEIIDASTQRKRESPP-------PLPHE 263
Query: 351 SWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIG 410
+ + +P P + Y +PS+ P + EFS++ILC++ IG
Sbjct: 264 NLMLPYQHVDRLPPMPLLDPYRSRPSQY------PVPEAE------EFSVRILCASELIG 311
Query: 411 GVIGKGGFNVKQLQQETGASIHVEDAPTD-SDERVIRASAFEGLWNPRSQTIDAILQLQN 469
VIGK G NV+Q++Q+TGA I V++ D S ER+I S+ E +P S I+A++ L +
Sbjct: 312 PVIGKSGANVRQVEQQTGARILVQELDKDASGERLIVLSSKEIPGDPVSPAIEALILLHS 371
Query: 470 KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K S SEK + TRL+VPSSKVGCILG+GG VI EMRRR A+IRV
Sbjct: 372 KVSASSEKRHLITRLVVPSSKVGCILGEGGKVITEMRRRIGAEIRV 417
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 113/240 (47%), Gaps = 43/240 (17%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVAD-TIPGSEERVIIIYSSPTKIAKTQN 189
RILC S IG VIGK+G V+ + ++T A+I V + S ER+I++ S
Sbjct: 302 RILCASELIGPVIGKSGANVRQVEQQTGARILVQELDKDASGERLIVLSS---------- 351
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
K+ +P A +AL+ +H ++ +E + RL+VP++
Sbjct: 352 ---------KEIPGDPVSPAIEALILLHSKV-----------SASSEKRHLITRLVVPSS 391
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VGC+LG+ G VI +R GA IRV P +E+VQ++G P++A+ AL E++
Sbjct: 392 KVGCILGEGGKVITEMRRRIGAEIRVYSKADKPKYLSFDEELVQVAGPPDIARDALTEIA 451
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMG 369
+ L +D GG + P P+A +P+R + +G P+ P G
Sbjct: 452 SRLRTRTLRD----------GGSGNN--PLPLAPSDGPRGDIFPSREFTQNGRPANPPYG 499
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 81/159 (50%), Gaps = 31/159 (19%)
Query: 389 GQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI--- 445
G M E +ILC KIG V+G+GG VK L++ET A I V D+ ++ERVI
Sbjct: 37 GPMSSQPIETVYRILCPGKKIGSVLGRGGHIVKALREETKAKIRVADSIPGAEERVIIIF 96
Query: 446 --------------RASAFEGLWNPRSQTI--DAILQLQNKTS-----------EFSEKG 478
S +G N + Q DA+L++ +K S E SE
Sbjct: 97 DYQDQSEQTDEAAQNISNNDGSENMKLQCFAQDALLKIHDKISTHEDPHDGAIHEKSETA 156
Query: 479 T-ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+T R+LVP ++VGC+LG+GG +I ++R T A IR++
Sbjct: 157 ADVTARILVPGNQVGCLLGKGGSIIQQLRNDTGAGIRIL 195
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 7/74 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
+ L++P+S +G +LG GG + E+R+ + GAR+KL + HPGSSE I++I+G
Sbjct: 688 SLELMIPNSSLGSVLGAGGVNLAEIRQ-------ISGARMKLLEGHPGSSESIMEIQGMP 740
Query: 541 EHLISAHGTYQSFM 554
+ + +A Q F+
Sbjct: 741 DQVRAAQSLLQGFI 754
>gi|242039239|ref|XP_002467014.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
gi|241920868|gb|EER94012.1| hypothetical protein SORBIDRAFT_01g018300 [Sorghum bicolor]
Length = 542
Score = 335 bits (858), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 194/418 (46%), Positives = 272/418 (65%), Gaps = 36/418 (8%)
Query: 107 KKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT 166
+K NS + + +S+P +T+YRILCP +KIG V+G+ G++VK+LREET+AKI VAD
Sbjct: 22 RKRKRLNSRHDDTSMSSEPVETIYRILCPVKKIGSVLGRGGDVVKALREETKAKIRVADP 81
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE----SMEPHCAAQDALLKVHDRIIE 222
IPG++ERVIII++ + Q + D AAETK +M+PHC AQDALLK+HD+I+
Sbjct: 82 IPGADERVIIIFN-----YQNQPELTDEAAETKFSDGLGNMKPHCFAQDALLKIHDKIVA 136
Query: 223 EDLFGGMASDDDNENST-ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRL 281
+++ G+A ++ +E++ +TAR+LV N VGCLLGK G +IQ+LRS+TGA IRVLP++ L
Sbjct: 137 DEIHDGVAHEEKSESADDVTARILVQGNQVGCLLGKGGSIIQQLRSDTGAGIRVLPSEDL 196
Query: 282 PPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKD-KPPSSFPQAYGGQNFHSPPAP 340
P CA+ +DE+VQISG P++ ++ALYE+ST LHQ+PRK+ +P A + SP
Sbjct: 197 PQCALKSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEEIINASTQRKRESPILL 256
Query: 341 MAD--MHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF 398
+ M P +S P P P + Y S + E + EF
Sbjct: 257 QHENPMLPHLHSDHP---------PPIPLLDPY------------RSGLQYHVTE-TEEF 294
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD-SDERVIRASAFEGLWNPR 457
S++ILC++ IG VIGK G NVK+++Q+TGA I V++ D S E +I S+ E P
Sbjct: 295 SIRILCASELIGSVIGKSGANVKRVEQQTGARIKVQEIDKDASGESLIIVSSKEVPSEPI 354
Query: 458 SQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
S I+A++ L +K S SEK +TRL+VPSSKVGCILG+GG VI EMRRRT A+IRV
Sbjct: 355 SPAIEALILLHDKVSAPSEKRHSSTRLVVPSSKVGCILGEGGKVITEMRRRTGAEIRV 412
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/167 (34%), Positives = 83/167 (49%), Gaps = 29/167 (17%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
RILC S IG VIGK+G VK + ++T A+I V + + +II SS
Sbjct: 297 RILCASELIGSVIGKSGANVKRVEQQTGARIKVQEIDKDASGESLIIVSS---------- 346
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
K+ EP A +AL+ +HD++ A + +ST RL+VP++
Sbjct: 347 --------KEVPSEPISPAIEALILLHDKV--------SAPSEKRHSST---RLVVPSSK 387
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
VGC+LG+ G VI +R TGA IRV P DE+VQ +G+
Sbjct: 388 VGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDDELVQTAGQ 434
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/151 (35%), Positives = 76/151 (50%), Gaps = 30/151 (19%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF----- 450
E +ILC KIG V+G+GG VK L++ET A I V D +DERVI +
Sbjct: 41 VETIYRILCPVKKIGSVLGRGGDVVKALREETKAKIRVADPIPGADERVIIIFNYQNQPE 100
Query: 451 -----------EGLWN--PRSQTIDAILQLQNKT-----------SEFSEKG-TITTRLL 485
+GL N P DA+L++ +K E SE +T R+L
Sbjct: 101 LTDEAAETKFSDGLGNMKPHCFAQDALLKIHDKIVADEIHDGVAHEEKSESADDVTARIL 160
Query: 486 VPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
V ++VGC+LG+GG +I ++R T A IRV+
Sbjct: 161 VQGNQVGCLLGKGGSIIQQLRSDTGAGIRVL 191
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 91/176 (51%), Gaps = 29/176 (16%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAP---TDSDERVIRASAFEG 452
S +++ + K+G ++G+GG + ++++ TGA I V D P + DE V A G
Sbjct: 378 STRLVVPSSKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDDELVQTAGQIHG 437
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGTITT-RLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+ R T S G ++T L +P+S + I+G GG + E+R+
Sbjct: 438 REDYRGLT--------------SATGFLSTIELRIPNSSLESIVGVGGVNLAEIRQ---- 479
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS-GQSMKVQPSS 566
+ GAR++L + H GSSE +V+I+G+ E +A Q F+++ +S++ QP S
Sbjct: 480 ---ISGARLRLHEAHAGSSESVVEIQGTLEEAKAAQSLLQGFISANSRSIQQQPQS 532
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 469 NKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPG 528
+ TS SE R+L P K+G +LG+GG V+ +R T+A IRV DP PG
Sbjct: 32 DDTSMSSEPVETIYRILCPVKKIGSVLGRGGDVVKALREETKAKIRVA-------DPIPG 84
Query: 529 SSECIVDI 536
+ E ++ I
Sbjct: 85 ADERVIII 92
>gi|413933966|gb|AFW68517.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 428
Score = 333 bits (855), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 194/441 (43%), Positives = 282/441 (63%), Gaps = 44/441 (9%)
Query: 83 DASKRNFFKKRPN---NQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKI 139
D S+R+ KKR + + KRK + +S + + +S+P +T+YRILCP++KI
Sbjct: 4 DKSRRSNSKKRRHSNSDDGKRKRL---------SSRHDDTSMSSEPIETIYRILCPAKKI 54
Query: 140 GGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETK 199
G V+G+ G+IVK+LREET+AKI VAD+IPG++ERVIII++ + Q + D AAE +
Sbjct: 55 GSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFN-----YQNQPELTDEAAEKQ 109
Query: 200 KE----SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLL 255
+M+PHC AQDALLK+HD+I+ ++++ +A D+ +++ +TAR+LV N VGCLL
Sbjct: 110 ISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDD--VTARILVQGNQVGCLL 167
Query: 256 GKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQN 315
GK G +IQ+LRS+TGA IRVL ++ LP CA+ +DE+VQISG P++ ++ALYE+ST LHQ+
Sbjct: 168 GKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQH 227
Query: 316 PRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQP 375
PRK+ P Q H P + +P+ + + P+ G
Sbjct: 228 PRKENRPLEQIIDASTQRKHESPT-LQHENPMLPHLHSHHPPPIPLL--DPYRSG----- 279
Query: 376 SRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
P + E + EFS++ILC++ IG VIGK G NV++++Q+TGA I V++
Sbjct: 280 -----------PQYPVSE-TEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQE 327
Query: 436 APTD-SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCI 494
D S ER+I S+ E P S TI+A++ L +K S SEK +TRL+VPS+KVGCI
Sbjct: 328 IDKDASGERLIIVSSNEIPTEPISPTIEALILLHDKVSASSEKHHSSTRLVVPSNKVGCI 387
Query: 495 LGQGGHVINEMRRRTQADIRV 515
LG+GG VI EMRRRT A+IRV
Sbjct: 388 LGEGGQVITEMRRRTGAEIRV 408
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 86/168 (51%), Gaps = 35/168 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP-GSEERVIIIYSS--PTKIAKT 187
RILC S IG VIGK+G V+ + ++T A+I V + S ER+II+ S+ PT
Sbjct: 293 RILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPT----- 347
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
EP +AL+ +HD++ AS + + +ST RL+VP
Sbjct: 348 ----------------EPISPTIEALILLHDKV--------SASSEKHHSST---RLVVP 380
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
+N VGC+LG+ G VI +R TGA IRV P DE+VQ++
Sbjct: 381 SNKVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVT 428
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 27/149 (18%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI----------- 445
E +ILC A KIG V+G+GG VK L++ET A I V D+ +DERVI
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 446 -----RASAFEGLWN--PRSQTIDAILQLQNK---------TSEFSEKGTITTRLLVPSS 489
+GL N P DA+L++ +K + +T R+LV +
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGN 161
Query: 490 KVGCILGQGGHVINEMRRRTQADIRVVGA 518
+VGC+LG+GG +I ++R T A IRV+ +
Sbjct: 162 QVGCLLGKGGSIIQQLRSDTGAGIRVLSS 190
>gi|413933965|gb|AFW68516.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 537
Score = 333 bits (854), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 194/441 (43%), Positives = 282/441 (63%), Gaps = 44/441 (9%)
Query: 83 DASKRNFFKKRPN---NQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKI 139
D S+R+ KKR + + KRK + +S + + +S+P +T+YRILCP++KI
Sbjct: 4 DKSRRSNSKKRRHSNSDDGKRKRL---------SSRHDDTSMSSEPIETIYRILCPAKKI 54
Query: 140 GGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETK 199
G V+G+ G+IVK+LREET+AKI VAD+IPG++ERVIII++ + Q + D AAE +
Sbjct: 55 GSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFN-----YQNQPELTDEAAEKQ 109
Query: 200 KE----SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLL 255
+M+PHC AQDALLK+HD+I+ ++++ +A D+ +++ +TAR+LV N VGCLL
Sbjct: 110 ISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDD--VTARILVQGNQVGCLL 167
Query: 256 GKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQN 315
GK G +IQ+LRS+TGA IRVL ++ LP CA+ +DE+VQISG P++ ++ALYE+ST LHQ+
Sbjct: 168 GKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQH 227
Query: 316 PRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQP 375
PRK+ P Q H P + +P+ + + P+ G
Sbjct: 228 PRKENRPLEQIIDASTQRKHESPT-LQHENPMLPHLHSHHPPPIPLL--DPYRSG----- 279
Query: 376 SRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
P + E + EFS++ILC++ IG VIGK G NV++++Q+TGA I V++
Sbjct: 280 -----------PQYPVSE-TEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQE 327
Query: 436 APTD-SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCI 494
D S ER+I S+ E P S TI+A++ L +K S SEK +TRL+VPS+KVGCI
Sbjct: 328 IDKDASGERLIIVSSNEIPTEPISPTIEALILLHDKVSASSEKHHSSTRLVVPSNKVGCI 387
Query: 495 LGQGGHVINEMRRRTQADIRV 515
LG+GG VI EMRRRT A+IRV
Sbjct: 388 LGEGGQVITEMRRRTGAEIRV 408
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 87/170 (51%), Gaps = 35/170 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP-GSEERVIIIYSS--PTKIAKT 187
RILC S IG VIGK+G V+ + ++T A+I V + S ER+II+ S+ PT
Sbjct: 293 RILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPT----- 347
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
EP +AL+ +HD++ AS + + +ST RL+VP
Sbjct: 348 ----------------EPISPTIEALILLHDKV--------SASSEKHHSST---RLVVP 380
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
+N VGC+LG+ G VI +R TGA IRV P DE+VQ +G+
Sbjct: 381 SNKVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQAAGQ 430
Score = 79.0 bits (193), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 75/147 (51%), Gaps = 27/147 (18%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI----------- 445
E +ILC A KIG V+G+GG VK L++ET A I V D+ +DERVI
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 446 -----RASAFEGLWN--PRSQTIDAILQLQNK---------TSEFSEKGTITTRLLVPSS 489
+GL N P DA+L++ +K + +T R+LV +
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGN 161
Query: 490 KVGCILGQGGHVINEMRRRTQADIRVV 516
+VGC+LG+GG +I ++R T A IRV+
Sbjct: 162 QVGCLLGKGGSIIQQLRSDTGAGIRVL 188
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 91/181 (50%), Gaps = 25/181 (13%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAP---TDSDERVIRASAFEG 452
S +++ + K+G ++G+GG + ++++ TGA I V D P + DE V A G
Sbjct: 374 STRLVVPSNKVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQAAGQIHG 433
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
L + R L + + FS T L +P+S + I+G GG + E+R+
Sbjct: 434 LEDYRG--------LPSASGRFSS----TIELRIPNSSLESIVGVGGVNLAEIRQ----- 476
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQNINP 572
+ GAR++L + H GSSE +V+I+G+ + +A + F+++ + SS + P
Sbjct: 477 --ISGARLRLHEAHAGSSESVVEIQGTLDQAKAAQSLLEGFISANSRQQQSHSSRMPLYP 534
Query: 573 Q 573
+
Sbjct: 535 R 535
>gi|413933963|gb|AFW68514.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 464
Score = 332 bits (850), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 195/441 (44%), Positives = 282/441 (63%), Gaps = 44/441 (9%)
Query: 83 DASKRNFFKKRPN---NQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKI 139
D S+R+ KKR + + KRK + +S + + +S+P +T+YRILCP++KI
Sbjct: 4 DKSRRSNSKKRRHSNSDDGKRKRL---------SSRHDDTSMSSEPIETIYRILCPAKKI 54
Query: 140 GGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETK 199
G V+G+ G+IVK+LREET+AKI VAD+IPG++ERVIII++ + Q + D AAE +
Sbjct: 55 GSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFN-----YQNQPELTDEAAEKQ 109
Query: 200 KE----SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLL 255
+M+PHC AQDALLK+HD+I+ ++++ +A D+ +++ +TAR+LV N VGCLL
Sbjct: 110 ISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDD--VTARILVQGNQVGCLL 167
Query: 256 GKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQN 315
GK G +IQ+LRS+TGA IRVL ++ LP CA+ +DE+VQISG P++ ++ALYE+ST LHQ+
Sbjct: 168 GKGGSIIQQLRSDTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQH 227
Query: 316 PRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQP 375
PRK+ P Q H P + +P+ + + P
Sbjct: 228 PRKENRPLEQIIDASTQRKHESPT-LQHENPMLPHLHSHHPPPIPLL-----------DP 275
Query: 376 SRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
R G P + E + EFS++ILC++ IG VIGK G NV++++Q+TGA I V++
Sbjct: 276 YRSG-------PQYPVSE-TEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQE 327
Query: 436 APTD-SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCI 494
D S ER+I S+ E P S TI+A++ L +K S SEK +TRL+VPS+KVGCI
Sbjct: 328 IDKDASGERLIIVSSNEIPTEPISPTIEALILLHDKVSASSEKHHSSTRLVVPSNKVGCI 387
Query: 495 LGQGGHVINEMRRRTQADIRV 515
LG+GG VI EMRRRT A+IRV
Sbjct: 388 LGEGGQVITEMRRRTGAEIRV 408
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 100/192 (52%), Gaps = 35/192 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP-GSEERVIIIYSS--PTKIAKT 187
RILC S IG VIGK+G V+ + ++T A+I V + S ER+II+ S+ PT
Sbjct: 293 RILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPT----- 347
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
EP +AL+ +HD++ AS + + +ST RL+VP
Sbjct: 348 ----------------EPISPTIEALILLHDKV--------SASSEKHHSST---RLVVP 380
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+N VGC+LG+ G VI +R TGA IRV P DE+VQ++G P +A+ AL E
Sbjct: 381 SNKVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIARGALTE 440
Query: 308 VSTLLHQNPRKD 319
+++ L +D
Sbjct: 441 IASRLRTRTLRD 452
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 76/149 (51%), Gaps = 27/149 (18%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI----------- 445
E +ILC A KIG V+G+GG VK L++ET A I V D+ +DERVI
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 446 -----RASAFEGLWN--PRSQTIDAILQLQNK---------TSEFSEKGTITTRLLVPSS 489
+GL N P DA+L++ +K + +T R+LV +
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGN 161
Query: 490 KVGCILGQGGHVINEMRRRTQADIRVVGA 518
+VGC+LG+GG +I ++R T A IRV+ +
Sbjct: 162 QVGCLLGKGGSIIQQLRSDTGAGIRVLSS 190
>gi|413933964|gb|AFW68515.1| hypothetical protein ZEAMMB73_983755 [Zea mays]
Length = 768
Score = 331 bits (849), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 188/429 (43%), Positives = 274/429 (63%), Gaps = 32/429 (7%)
Query: 92 KRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVK 151
+R N++ +R K +S + + +S+P +T+YRILCP++KIG V+G+ G+IVK
Sbjct: 7 RRSNSKKRRHSNSDDGKRKRLSSRHDDTSMSSEPIETIYRILCPAKKIGSVLGRGGDIVK 66
Query: 152 SLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE----SMEPHC 207
+LREET+AKI VAD+IPG++ERVIII++ + Q + D AAE + +M+PHC
Sbjct: 67 ALREETKAKIRVADSIPGADERVIIIFN-----YQNQPELTDEAAEKQISDGLGNMKPHC 121
Query: 208 AAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRS 267
AQDALLK+HD+I+ ++++ +A D+ +++ +TAR+LV N VGCLLGK G +IQ+LRS
Sbjct: 122 FAQDALLKIHDKIVADEIYDEVAHDESSDD--VTARILVQGNQVGCLLGKGGSIIQQLRS 179
Query: 268 ETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQ 327
+TGA IRVL ++ LP CA+ +DE+VQISG P++ ++ALYE+ST LHQ+PRK+ P
Sbjct: 180 DTGAGIRVLSSENLPQCALQSDELVQISGAPSLVRKALYEISTRLHQHPRKENRPLEQII 239
Query: 328 AYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCP 387
Q H P + +P+ + + P+ G
Sbjct: 240 DASTQRKHESPT-LQHENPMLPHLHSHHPPPIPLL--DPYRSG----------------- 279
Query: 388 PGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD-SDERVIR 446
P + EFS++ILC++ IG VIGK G NV++++Q+TGA I V++ D S ER+I
Sbjct: 280 PQYPVSETEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLII 339
Query: 447 ASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMR 506
S+ E P S TI+A++ L +K S SEK +TRL+VPS+KVGCILG+GG VI EMR
Sbjct: 340 VSSNEIPTEPISPTIEALILLHDKVSASSEKHHSSTRLVVPSNKVGCILGEGGQVITEMR 399
Query: 507 RRTQADIRV 515
RRT A+IRV
Sbjct: 400 RRTGAEIRV 408
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 120/240 (50%), Gaps = 46/240 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP-GSEERVIIIYSSPTKIAKTQN 189
RILC S IG VIGK+G V+ + ++T A+I V + S ER+II+
Sbjct: 293 RILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIV------------ 340
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
S+ E E + P +AL+ +HD++ AS + + +ST RL+VP+N
Sbjct: 341 ----SSNEIPTEPISPTI---EALILLHDKV--------SASSEKHHSST---RLVVPSN 382
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VGC+LG+ G VI +R TGA IRV P DE+VQ++G P +A+ AL E++
Sbjct: 383 KVGCILGEGGQVITEMRRRTGAEIRVYSKADKPKYLSFGDELVQVAGPPAIARGALTEIA 442
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPS--TPW 367
+ L +D ++ P + + P DM P+R +L+G P+ TP+
Sbjct: 443 SRLRTRTLRDTSTANNPPPFAPSD-----DPTVDM--------PSRKLTLYGGPTNDTPY 489
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 76/147 (51%), Gaps = 27/147 (18%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF------ 450
E +ILC A KIG V+G+GG VK L++ET A I V D+ +DERVI +
Sbjct: 42 ETIYRILCPAKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNQPEL 101
Query: 451 ----------EGLWN--PRSQTIDAILQLQNK---------TSEFSEKGTITTRLLVPSS 489
+GL N P DA+L++ +K + +T R+LV +
Sbjct: 102 TDEAAEKQISDGLGNMKPHCFAQDALLKIHDKIVADEIYDEVAHDESSDDVTARILVQGN 161
Query: 490 KVGCILGQGGHVINEMRRRTQADIRVV 516
+VGC+LG+GG +I ++R T A IRV+
Sbjct: 162 QVGCLLGKGGSIIQQLRSDTGAGIRVL 188
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 51/93 (54%), Gaps = 7/93 (7%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+S + I+G GG + E+R+ + GAR++L + H GSSE +V+I+G+
Sbjct: 681 TIELRIPNSSLESIVGVGGVNLAEIRQ-------ISGARLRLHEAHAGSSESVVEIQGTL 733
Query: 541 EHLISAHGTYQSFMTSGQSMKVQPSSYQNINPQ 573
+ +A + F+++ + SS + P+
Sbjct: 734 DQAKAAQSLLEGFISANSRQQQSHSSRMPLYPR 766
>gi|414870926|tpg|DAA49483.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 541
Score = 326 bits (835), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 196/442 (44%), Positives = 277/442 (62%), Gaps = 43/442 (9%)
Query: 83 DASKRNFFKKRPN---NQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKI 139
D S+R+ KKR + + KRK + N+ + + S+P +T+YRILCP +KI
Sbjct: 4 DKSRRSNSKKRTHSNSDDGKRKRL---------NTRHDDTSMFSEPIETIYRILCPVKKI 54
Query: 140 GGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETK 199
G V+G+ G+IVK+LREET+AKI VAD+IPG++ERVIII++ + T D AAE K
Sbjct: 55 GSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEPT-----DEAAEEK 109
Query: 200 KE----SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST-ITARLLVPNNMVGCL 254
+ + HC AQDALLK+HD+I+ +++ +A+D+ +E++ +TAR+LV N VGCL
Sbjct: 110 NSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCL 169
Query: 255 LGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQ 314
LGK G +IQ+LRS TGA IRVLP++ LP CA+ +DE+VQISG P++ ++ALYE+ST LHQ
Sbjct: 170 LGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQ 229
Query: 315 NPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQ 374
+PRK+ P Q P + S P +S P P + Y
Sbjct: 230 HPRKENRPLEEIIDASTQRKRESPTLQHEY-----SMLPHLHSD--HTPPIPLLDPY--- 279
Query: 375 PSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 434
S P + E + EFS++ILC++ IG VIGK G NV++++Q+TGA I V+
Sbjct: 280 ---------RSGPQYPVTE-TEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQ 329
Query: 435 DAPTD-SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGC 493
+ D S ER+I S+ E P S I+A++ L +K S SEK +TRL+VPSSKVGC
Sbjct: 330 EIDKDASGERLIIISSNEIPAEPISPAIEALILLHDKVSAPSEKHHSSTRLVVPSSKVGC 389
Query: 494 ILGQGGHVINEMRRRTQADIRV 515
I+G+GG VI +MRRRT A+IRV
Sbjct: 390 IIGEGGKVITDMRRRTGAEIRV 411
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 30/150 (20%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF------ 450
E +ILC KIG V+G+GG VK L++ET A I V D+ +DERVI +
Sbjct: 42 ETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEP 101
Query: 451 ----------EGLWNPRSQTI--DAILQLQNK-----------TSEFSEKG-TITTRLLV 486
+GL N +S DA+L++ +K E SE +T R+LV
Sbjct: 102 TDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILV 161
Query: 487 PSSKVGCILGQGGHVINEMRRRTQADIRVV 516
++VGC+LG+GG +I ++R T A IRV+
Sbjct: 162 QGNQVGCLLGKGGSIIQQLRSNTGAGIRVL 191
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/168 (34%), Positives = 85/168 (50%), Gaps = 31/168 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP-GSEERVIIIYSSPTKIAKTQN 189
RILC S IG VIGK+G V+ + ++T A+I V + S ER+III S+
Sbjct: 296 RILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEI------- 348
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
EP A +AL+ +HD++ A + + +ST RL+VP++
Sbjct: 349 ------------PAEPISPAIEALILLHDKV--------SAPSEKHHSST---RLVVPSS 385
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
VGC++G+ G VI +R TGA IRV P DE+VQ +G+
Sbjct: 386 KVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQAAGQ 433
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 87/174 (50%), Gaps = 25/174 (14%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAP---TDSDERVIRASAFEG 452
S +++ + K+G +IG+GG + +++ TGA I V D P + DE V A G
Sbjct: 377 STRLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQAAGQIHG 436
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ R T + T F T L +P+S +G I+G GG + E+R+
Sbjct: 437 REDYREPT--------SATGRFLS----TIELRIPNSSLGSIVGAGGVNLAEIRQ----- 479
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSS 566
V GAR++L + H GSSE +V+I+G+ + +A Q F+++ + QP S
Sbjct: 480 --VSGARLRLHEAHAGSSESVVEIQGTLDQAKAAQSLLQGFISANSRQQQQPYS 531
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 468 QNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP 527
+ TS FSE R+L P K+G +LG+GG ++ +R T+A IRV D P
Sbjct: 31 HDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVA-------DSIP 83
Query: 528 GSSECIVDI 536
G+ E ++ I
Sbjct: 84 GADERVIII 92
>gi|414870928|tpg|DAA49485.1| TPA: hypothetical protein ZEAMMB73_398324 [Zea mays]
Length = 770
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 195/444 (43%), Positives = 278/444 (62%), Gaps = 47/444 (10%)
Query: 83 DASKRNFFKKRPN---NQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKI 139
D S+R+ KKR + + KRK + N+ + + S+P +T+YRILCP +KI
Sbjct: 4 DKSRRSNSKKRTHSNSDDGKRKRL---------NTRHDDTSMFSEPIETIYRILCPVKKI 54
Query: 140 GGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETK 199
G V+G+ G+IVK+LREET+AKI VAD+IPG++ERVIII++ + + + D AAE K
Sbjct: 55 GSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFN-----YQNEPEPTDEAAEEK 109
Query: 200 KE----SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST-ITARLLVPNNMVGCL 254
+ + HC AQDALLK+HD+I+ +++ +A+D+ +E++ +TAR+LV N VGCL
Sbjct: 110 NSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCL 169
Query: 255 LGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQ 314
LGK G +IQ+LRS TGA IRVLP++ LP CA+ +DE+VQISG P++ ++ALYE+ST LHQ
Sbjct: 170 LGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQ 229
Query: 315 NPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHG--MPSTPWMGGYG 372
+PRK+ P Q P + L + LH P P + Y
Sbjct: 230 HPRKENRPLEEIIDASTQRKRESPTLQHEYSMLPH---------LHSDHTPPIPLLDPY- 279
Query: 373 DQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIH 432
S P + E + EFS++ILC++ IG VIGK G NV++++Q+TGA I
Sbjct: 280 -----------RSGPQYPVTE-TEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIK 327
Query: 433 VEDAPTD-SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKV 491
V++ D S ER+I S+ E P S I+A++ L +K S SEK +TRL+VPSSKV
Sbjct: 328 VQEIDKDASGERLIIISSNEIPAEPISPAIEALILLHDKVSAPSEKHHSSTRLVVPSSKV 387
Query: 492 GCILGQGGHVINEMRRRTQADIRV 515
GCI+G+GG VI +MRRRT A+IRV
Sbjct: 388 GCIIGEGGKVITDMRRRTGAEIRV 411
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 31/190 (16%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP-GSEERVIIIYSSPTKIAKTQN 189
RILC S IG VIGK+G V+ + ++T A+I V + S ER+III
Sbjct: 296 RILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIII------------ 343
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
S+ E E + P A +AL+ +HD++ A + + +ST RL+VP++
Sbjct: 344 ----SSNEIPAEPISP---AIEALILLHDKV--------SAPSEKHHSST---RLVVPSS 385
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VGC++G+ G VI +R TGA IRV P DE+VQ++G P +A+ AL E++
Sbjct: 386 KVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIA 445
Query: 310 TLLHQNPRKD 319
+ L +D
Sbjct: 446 SRLRTRTLRD 455
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 30/150 (20%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF------ 450
E +ILC KIG V+G+GG VK L++ET A I V D+ +DERVI +
Sbjct: 42 ETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEP 101
Query: 451 ----------EGLWNPRSQTI--DAILQLQNK-----------TSEFSEKG-TITTRLLV 486
+GL N +S DA+L++ +K E SE +T R+LV
Sbjct: 102 TDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILV 161
Query: 487 PSSKVGCILGQGGHVINEMRRRTQADIRVV 516
++VGC+LG+GG +I ++R T A IRV+
Sbjct: 162 QGNQVGCLLGKGGSIIQQLRSNTGAGIRVL 191
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+S +G I+G GG + E+R+ V GAR++L + H GSSE +V+I+G+
Sbjct: 682 TIELRIPNSSLGSIVGAGGVNLAEIRQ-------VSGARLRLHEAHAGSSESVVEIQGTL 734
Query: 541 EHLISAHGTYQSFMTSGQSMKVQPSS 566
+ +A Q F+++ + QP S
Sbjct: 735 DQAKAAQSLLQGFISANSRQQQQPYS 760
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 468 QNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP 527
+ TS FSE R+L P K+G +LG+GG ++ +R T+A IRV D P
Sbjct: 31 HDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVA-------DSIP 83
Query: 528 GSSECIVDI 536
G+ E ++ I
Sbjct: 84 GADERVIII 92
>gi|195655947|gb|ACG47441.1| nucleic acid binding protein [Zea mays]
gi|414870927|tpg|DAA49484.1| TPA: nucleic acid binding protein [Zea mays]
Length = 769
Score = 324 bits (830), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 195/444 (43%), Positives = 278/444 (62%), Gaps = 47/444 (10%)
Query: 83 DASKRNFFKKRPN---NQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKI 139
D S+R+ KKR + + KRK + N+ + + S+P +T+YRILCP +KI
Sbjct: 4 DKSRRSNSKKRTHSNSDDGKRKRL---------NTRHDDTSMFSEPIETIYRILCPVKKI 54
Query: 140 GGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETK 199
G V+G+ G+IVK+LREET+AKI VAD+IPG++ERVIII++ + + + D AAE K
Sbjct: 55 GSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFN-----YQNEPEPTDEAAEEK 109
Query: 200 KE----SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST-ITARLLVPNNMVGCL 254
+ + HC AQDALLK+HD+I+ +++ +A+D+ +E++ +TAR+LV N VGCL
Sbjct: 110 NSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILVQGNQVGCL 169
Query: 255 LGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQ 314
LGK G +IQ+LRS TGA IRVLP++ LP CA+ +DE+VQISG P++ ++ALYE+ST LHQ
Sbjct: 170 LGKGGSIIQQLRSNTGAGIRVLPSENLPQCALKSDELVQISGAPSLVRKALYEISTRLHQ 229
Query: 315 NPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHG--MPSTPWMGGYG 372
+PRK+ P Q P + L + LH P P + Y
Sbjct: 230 HPRKENRPLEEIIDASTQRKRESPTLQHEYSMLPH---------LHSDHTPPIPLLDPY- 279
Query: 373 DQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIH 432
S P + E + EFS++ILC++ IG VIGK G NV++++Q+TGA I
Sbjct: 280 -----------RSGPQYPVTE-TEEFSIRILCASELIGSVIGKSGANVRRVEQQTGARIK 327
Query: 433 VEDAPTD-SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKV 491
V++ D S ER+I S+ E P S I+A++ L +K S SEK +TRL+VPSSKV
Sbjct: 328 VQEIDKDASGERLIIISSNEIPAEPISPAIEALILLHDKVSAPSEKHHSSTRLVVPSSKV 387
Query: 492 GCILGQGGHVINEMRRRTQADIRV 515
GCI+G+GG VI +MRRRT A+IRV
Sbjct: 388 GCIIGEGGKVITDMRRRTGAEIRV 411
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 31/190 (16%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP-GSEERVIIIYSSPTKIAKTQN 189
RILC S IG VIGK+G V+ + ++T A+I V + S ER+III
Sbjct: 296 RILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIII------------ 343
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
S+ E E + P A +AL+ +HD++ A + + +ST RL+VP++
Sbjct: 344 ----SSNEIPAEPISP---AIEALILLHDKV--------SAPSEKHHSST---RLVVPSS 385
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VGC++G+ G VI +R TGA IRV P DE+VQ++G P +A+ AL E++
Sbjct: 386 KVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIA 445
Query: 310 TLLHQNPRKD 319
+ L +D
Sbjct: 446 SRLRTRTLRD 455
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 78/150 (52%), Gaps = 30/150 (20%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF------ 450
E +ILC KIG V+G+GG VK L++ET A I V D+ +DERVI +
Sbjct: 42 ETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVADSIPGADERVIIIFNYQNEPEP 101
Query: 451 ----------EGLWNPRSQTI--DAILQLQNK-----------TSEFSEKG-TITTRLLV 486
+GL N +S DA+L++ +K E SE +T R+LV
Sbjct: 102 TDEAAEEKNSDGLGNFKSHCFAQDALLKIHDKIVSDEIHDEVANDEKSESADDVTARILV 161
Query: 487 PSSKVGCILGQGGHVINEMRRRTQADIRVV 516
++VGC+LG+GG +I ++R T A IRV+
Sbjct: 162 QGNQVGCLLGKGGSIIQQLRSNTGAGIRVL 191
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+S +G I+G GG + E+R+ V GAR++L + H GSSE +V+I+G+
Sbjct: 681 TIELRIPNSSLGSIVGAGGVNLAEIRQ-------VSGARLRLHEAHAGSSESVVEIQGTL 733
Query: 541 EHLISAHGTYQSFMTSGQSMKVQPSS 566
+ +A Q F+++ + QP S
Sbjct: 734 DQAKAAQSLLQGFISANSRQQQQPYS 759
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 468 QNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP 527
+ TS FSE R+L P K+G +LG+GG ++ +R T+A IRV D P
Sbjct: 31 HDDTSMFSEPIETIYRILCPVKKIGSVLGRGGDIVKALREETKAKIRVA-------DSIP 83
Query: 528 GSSECIVDI 536
G+ E ++ I
Sbjct: 84 GADERVIII 92
>gi|53749469|gb|AAU90323.1| KH domain containing protein [Solanum demissum]
Length = 533
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 180/444 (40%), Positives = 257/444 (57%), Gaps = 63/444 (14%)
Query: 84 ASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVI 143
A +RN + KR ++ G K+ ++ S G P DTV+R LCP+ KIG +I
Sbjct: 2 AGQRNNYGKRMQSESDYSRSDGSKRRTPTDEKESNSIG---PEDTVFRYLCPTGKIGSII 58
Query: 144 GKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESM 203
G G+I K LR ET +KI +++TIPG EERV+ IYS ++ + +E + +
Sbjct: 59 GVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYS---------GSEETNVSEDTGDLI 109
Query: 204 EPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
P AQDAL +VHDR++ EDL +D ++ IT R+LVP++ +GC++GK G VIQ
Sbjct: 110 SP---AQDALFRVHDRVLAEDL---RMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQVIQ 163
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK--- 320
LRSETGA IRVL ++ LPPCA+N+DE++QI+G+ V K+ALY+V+ LH NP + +
Sbjct: 164 NLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSRSQHQL 223
Query: 321 --PPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPS-- 376
PS F G N H+ M T MG Y S
Sbjct: 224 LSSPSIFRSGAGFVNPHAGTQVMG---------------------VTSLMGPYASYKSDG 262
Query: 377 RMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 436
R S S+ EF+++++C +G VIGKGG +KQL+QE+GASI V+ A
Sbjct: 263 RSKSSSVK------------EFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSA 310
Query: 437 PTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEK----GTITTRLLVPSSKVG 492
+ D+ +I SA E + +S TIDA ++LQ ++SE +EK +TTRLLVPSS+VG
Sbjct: 311 AAEGDDCIIFVSAKEA-FEDQSPTIDATMRLQPRSSEKTEKESGDAILTTRLLVPSSRVG 369
Query: 493 CILGQGGHVINEMRRRTQADIRVV 516
C++G+GG +INEMR T+A IRV+
Sbjct: 370 CLIGKGGSIINEMRNSTRASIRVL 393
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/241 (34%), Positives = 121/241 (50%), Gaps = 34/241 (14%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R++CP+ +G VIGK G I+K LR+E+ A I V D+ + II S+
Sbjct: 275 RLVCPTENVGAVIGKGGGIIKQLRQESGASIKV-DSAAAEGDDCIIFVSA---------- 323
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
KE+ E DA +++ R E+ ++ ++ ++ +T RLLVP++
Sbjct: 324 ---------KEAFEDQSPTIDATMRLQPRSSEK-------TEKESGDAILTTRLLVPSSR 367
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
VGCL+GK G +I +R+ T A+IRVL + LP A DEMVQI+G NVA AL +V
Sbjct: 368 VGCLIGKGGSIINEMRNSTRASIRVLSKENLPKVASEDDEMVQITGDANVATNALLQVLM 427
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGG 370
L N + + SFP G ++ A M D GN +R HG S + GG
Sbjct: 428 RLRANTFEME--GSFPAFSPGLSYVPMSASMPDGSRYGNRDNRSRR---HGYSS--YSGG 480
Query: 371 Y 371
+
Sbjct: 481 H 481
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 43/204 (21%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI-------RASAFEG 452
+ LC GKIG +IG GG KQL+ ET + I + + +ERV+ + E
Sbjct: 45 FRYLCPTGKIGSIIGVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYSGSEETNVSED 104
Query: 453 LWNPRSQTIDAILQLQNKT--------SEFSEKGTITTRLLVPSSKVGCILGQGGHVINE 504
+ S DA+ ++ ++ + + IT R+LVPS ++GC++G+GG VI
Sbjct: 105 TGDLISPAQDALFRVHDRVLAEDLRMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQVIQN 164
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL-ISAHGTYQSFMTSGQSMKVQ 563
+R T A IRV+ SSEHL A + + +G+ V+
Sbjct: 165 LRSETGAQIRVL----------------------SSEHLPPCALNSDELLQITGEGAVVK 202
Query: 564 PSSYQ-----NINPQQSSCQTMSS 582
+ YQ + NP +S Q +SS
Sbjct: 203 KALYQVAARLHDNPSRSQHQLLSS 226
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 66/221 (29%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAP---TDSDE-------- 442
+ ++++L + +IG VIGKGG ++ L+ ETGA I V E P +SDE
Sbjct: 139 QITVRMLVPSDQIGCVIGKGGQVIQNLRSETGAQIRVLSSEHLPPCALNSDELLQITGEG 198
Query: 443 RVIRASAFE---------------------------GLWNPRSQT-IDAILQLQNKTSEF 474
V++ + ++ G NP + T + + L + +
Sbjct: 199 AVVKKALYQVAARLHDNPSRSQHQLLSSPSIFRSGAGFVNPHAGTQVMGVTSLMGPYASY 258
Query: 475 SEKG--------TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPH 526
G RL+ P+ VG ++G+GG +I ++R+ + A I+V A + D
Sbjct: 259 KSDGRSKSSSVKEFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAAEGDD-- 316
Query: 527 PGSSECIVDIRGSSEHLISAHGTYQSFM-TSGQSMKVQPSS 566
CI+ +SA ++ T +M++QP S
Sbjct: 317 -----CII--------FVSAKEAFEDQSPTIDATMRLQPRS 344
>gi|224141011|ref|XP_002323868.1| predicted protein [Populus trichocarpa]
gi|222866870|gb|EEF04001.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 301 bits (771), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 181/441 (41%), Positives = 273/441 (61%), Gaps = 49/441 (11%)
Query: 84 ASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVI 143
A +RN + KR ++Q +G K S RE+ +SQ DTVYR LCP+RKIG +I
Sbjct: 2 AGQRNSYGKRAHSQSDYD--IGGNKRRNSGDDRERFVIDSQ--DTVYRYLCPARKIGSII 57
Query: 144 GKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESM 203
G+ G I+K LR +T++KI V +T+PG EERV+ IYS P+ D+ + E +
Sbjct: 58 GRGGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYS-PS--------DETNEYEDSGNYI 108
Query: 204 EPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS-TITARLLVPNNMVGCLLGKRGDVI 262
P AQDAL +VHD++I EDL +DD+E S +TA+LLVP++ +GC++GK G ++
Sbjct: 109 SP---AQDALFRVHDKVIAEDL----QVEDDSEGSPQVTAKLLVPSDQIGCIIGKGGQIV 161
Query: 263 QRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK-- 320
Q +RSETGA IR+L + LPPCA+++DE+VQISG+ V K+ALY++++ LH NP + +
Sbjct: 162 QNIRSETGAVIRILKDEHLPPCALSSDELVQISGEAAVLKKALYQIASRLHDNPSRSQHL 221
Query: 321 PPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMG- 379
S+ P Y +G+ P+ + + G+ P MG YG G
Sbjct: 222 LVSAVPNVY---------------SSVGSLVGPSAAAPIVGI--APLMGPYGGFKGDTGD 264
Query: 380 -SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT 438
S S+ S P ++ S EFS++++C IG VIGKGG + Q++QE+GA+I V+ +
Sbjct: 265 WSRSLYSAPRDEL--ASKEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVA 322
Query: 439 DSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TITTRLLVPSSKVGCI 494
+ D+ +I SA E +++ S TI+A ++LQ + SE E+ + TTRLLVPSS++GC+
Sbjct: 323 EGDDCLITISAKE-IYDHYSPTIEAAVRLQPRCSEKMERDSGLISFTTRLLVPSSRIGCL 381
Query: 495 LGQGGHVINEMRRRTQADIRV 515
LG+GG +I+EMR+ T+A IR+
Sbjct: 382 LGKGGAIIDEMRKLTKAIIRI 402
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 109 GNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
G+WS S + R++CP+ IG VIGK G I+ +R+E+ A I V ++
Sbjct: 263 GDWSRSLYSAPRDELASKEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVA 322
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
++ +I I + KE + + +A +++ R E+
Sbjct: 323 EGDDCLITI--------------------SAKEIYDHYSPTIEAAVRLQPRCSEK----- 357
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+ D+ + T RLLVP++ +GCLLGK G +I +R T A IR+ + LP A +
Sbjct: 358 --MERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRIPRKENLPKVASDD 415
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQN 315
DEMVQI+G +VAK AL ++S L N
Sbjct: 416 DEMVQIAGDLDVAKDALIQISRRLRAN 442
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 86/165 (52%), Gaps = 25/165 (15%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI-------RASAFEGL 453
+ LC A KIG +IG+GG +KQL+ +T + I V + +ERV+ + +E
Sbjct: 45 RYLCPARKIGSIIGRGGEIIKQLRIDTKSKIRVGETVPGCEERVVTIYSPSDETNEYEDS 104
Query: 454 WNPRSQTIDAILQLQNKT------SEFSEKGT--ITTRLLVPSSKVGCILGQGGHVINEM 505
N S DA+ ++ +K E +G+ +T +LLVPS ++GCI+G+GG ++ +
Sbjct: 105 GNYISPAQDALFRVHDKVIAEDLQVEDDSEGSPQVTAKLLVPSDQIGCIIGKGGQIVQNI 164
Query: 506 RRRTQADIRVVGARVKLQDPH----PGSSECIVDIRGSSEHLISA 546
R T A IR+ L+D H SS+ +V I G + L A
Sbjct: 165 RSETGAVIRI------LKDEHLPPCALSSDELVQISGEAAVLKKA 203
>gi|113205451|gb|AAW28569.2| KH domain containing protein, putative [Solanum demissum]
Length = 600
Score = 301 bits (770), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 179/442 (40%), Positives = 258/442 (58%), Gaps = 59/442 (13%)
Query: 84 ASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVI 143
A +RN + KR ++ G K+ ++ S G P DTV+R LCP+ KIG +I
Sbjct: 2 AGQRNNYGKRMQSESDYSRSDGSKRRTPTDEKESNSIG---PEDTVFRYLCPTGKIGSII 58
Query: 144 GKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESM 203
G G+I K LR ET +KI +++TIPG EERV+ IYS ++ + +E + +
Sbjct: 59 GVGGDIAKQLRTETNSKIRISETIPGCEERVVTIYS---------GSEETNVSEDTGDLI 109
Query: 204 EPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
P AQDAL +VHDR++ EDL +D ++ IT R+LVP++ +GC++GK G VIQ
Sbjct: 110 SP---AQDALFRVHDRVLAEDL---RMDEDLEDHQQITVRMLVPSDQIGCVIGKGGQVIQ 163
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK--- 320
LRSETGA IRVL ++ LPPCA+N+DE++QI+G+ V K+ALY+V+ LH NP + +
Sbjct: 164 NLRSETGAQIRVLSSEHLPPCALNSDELLQITGEGAVVKKALYQVAARLHDNPSRSQHQL 223
Query: 321 --PPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRM 378
PS F G N H+ M +G P+ D SR
Sbjct: 224 LSSPSIFRSGAGLVNPHAGTQVMGVTSLMG-----------------PYASYKSDGRSR- 265
Query: 379 GSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT 438
S S+ EF+++++C +G VIGKGG +KQL+QE+GASI V+ A
Sbjct: 266 -SSSVK------------EFAVRLVCPTENVGAVIGKGGGIIKQLRQESGASIKVDSAAA 312
Query: 439 DSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEK----GTITTRLLVPSSKVGCI 494
+ D+ +I SA E + +S TIDA ++LQ ++SE +EK +TTRLLVPSS+VGC+
Sbjct: 313 EGDDCIIFVSAKEA-FEDQSPTIDATMRLQPRSSEKTEKESGDAILTTRLLVPSSRVGCL 371
Query: 495 LGQGGHVINEMRRRTQADIRVV 516
+G+GG +INEMR T+A IRV+
Sbjct: 372 IGKGGSIINEMRNSTRASIRVL 393
>gi|356572762|ref|XP_003554535.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 548
Score = 293 bits (749), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 179/443 (40%), Positives = 264/443 (59%), Gaps = 49/443 (11%)
Query: 84 ASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVI 143
+R+ + KRP++Q G K REQ + + DTVYR +CP RKIG VI
Sbjct: 2 GGQRSGYGKRPHSQSDHDN--GPNKRRNHGDDREQFVIDLE--DTVYRYVCPGRKIGSVI 57
Query: 144 GKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESM 203
G+ G IVK LR ET+AKI + +T+PG EERV+ IYS P+ D+ +A E +
Sbjct: 58 GRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYS-PS--------DETNAVEGGGNYV 108
Query: 204 EPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
P AQDAL KVHDR++ ED DD+ +TA+LLVP++ +GC++GK G ++Q
Sbjct: 109 SP---AQDALFKVHDRVVAEDFH---GDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSIVQ 162
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPS 323
+RSETGA IR+L D LP CA+++DE+VQI+G +V K+AL ++++ LH NP + +
Sbjct: 163 NIRSETGAQIRILKDDHLPLCALSSDELVQITGDASVVKKALCQIASRLHDNPSRSQ--- 219
Query: 324 SFPQAYGGQNFHSPPAPMADMHPLGNSS-WPARNSSLHGM-PSTPWMGGY----GDQPSR 377
H + + ++P G S P + + G+ P GGY GD P R
Sbjct: 220 -----------HLLTSAVPGVYPAGGSLIGPGAGAPIVGIAPLVGAYGGYKGDTGDWPPR 268
Query: 378 MGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP 437
S+ S P + + EFS++++C G IGGVIGKGG + Q++QE+GA+I V+ +
Sbjct: 269 ----SMYSAPRDEAS--TKEFSVRLVCPTGNIGGVIGKGGMIINQIRQESGATIKVDSST 322
Query: 438 TDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TITTRLLVPSSKVGC 493
T+ DE +I S E S TI+A ++LQ + SE E+ + TTRLLVP+S++GC
Sbjct: 323 TEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCSEKVERDSGIISFTTRLLVPTSRIGC 382
Query: 494 ILGQGGHVINEMRRRTQADIRVV 516
++G+GG +I EMRR T+A+IR++
Sbjct: 383 LIGKGGSIITEMRRLTKANIRII 405
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 96/185 (51%), Gaps = 26/185 (14%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R++CP+ IGGVIGK G I+ +R+E+ A I V + +E +I I
Sbjct: 286 RLVCPTGNIGGVIGKGGMIINQIRQESGATIKVDSSTTEGDECLIAI------------- 332
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
S E +E+ P +A +++ R E+ + D+ + T RLLVP +
Sbjct: 333 ---STKEFFEETFSPTI---EAAVRLQPRCSEK-------VERDSGIISFTTRLLVPTSR 379
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+GCL+GK G +I +R T ANIR++ + LP A DEMVQISG ++AK AL V T
Sbjct: 380 IGCLIGKGGSIITEMRRLTKANIRIISKENLPKIASEDDEMVQISGDLDIAKDALVHVLT 439
Query: 311 LLHQN 315
L N
Sbjct: 440 RLRAN 444
>gi|356550877|ref|XP_003543809.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 561
Score = 291 bits (745), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 175/443 (39%), Positives = 261/443 (58%), Gaps = 49/443 (11%)
Query: 84 ASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVI 143
+R+ + KRP++Q G K REQ +S+ DTVYR +CP RKIG VI
Sbjct: 2 GGQRSGYGKRPHSQSDHDN--GPNKRRNHGDDREQFVIDSE--DTVYRYVCPGRKIGSVI 57
Query: 144 GKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESM 203
G+ G IVK LR ET+AKI + +T+PG EERV+ IY D+ +A E +
Sbjct: 58 GRGGEIVKQLRVETKAKIRIGETVPGCEERVVTIYGP---------SDETNAVEGGGNYV 108
Query: 204 EPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
P AQDAL KVHDR++ ED DD+ +TA+LLVP++ +GC++GK G ++Q
Sbjct: 109 SP---AQDALFKVHDRVVAEDFH---GDQDDDGGQQVTAKLLVPSDQIGCVIGKGGSIVQ 162
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPS 323
+R ETGA IR+L D LP CA+++DE+VQI+G V K+ALY++++ LH NP + +
Sbjct: 163 NIRGETGAQIRILKDDHLPMCALSSDELVQITGDAAVVKKALYQIASRLHDNPSRSQ--- 219
Query: 324 SFPQAYGGQNFHSPPAPMADMHPLGNSS-WPARNSSLHGM-PSTPWMGGY----GDQPSR 377
H + ++ ++P G S P + + G+ P GGY GD P R
Sbjct: 220 -----------HLLTSAVSGVYPAGGSLIGPGAGAPIVGIAPLVGSYGGYKGDTGDWPPR 268
Query: 378 MGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP 437
S+ S P + S EFS++++C G IGGVIGKGG + Q++Q++GA+I V+ +
Sbjct: 269 ----SMYSAPRDEAS--SKEFSVRLVCPTGNIGGVIGKGGMIINQIRQDSGATIKVDSST 322
Query: 438 TDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TITTRLLVPSSKVGC 493
+ DE +I S E S TI+A ++LQ + SE E+ + TTRLLVP++++GC
Sbjct: 323 IEGDECLIAISTKEFFEETFSPTIEAAVRLQPRCSEKVERDSGIISFTTRLLVPTTRIGC 382
Query: 494 ILGQGGHVINEMRRRTQADIRVV 516
++G+GG +I +MRR T+A+IR++
Sbjct: 383 LIGKGGSIITDMRRLTKANIRII 405
Score = 102 bits (253), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 69/186 (37%), Positives = 98/186 (52%), Gaps = 28/186 (15%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKIAKTQN 189
R++CP+ IGGVIGK G I+ +R+++ A I V + TI G E +I S+ +T +
Sbjct: 286 RLVCPTGNIGGVIGKGGMIINQIRQDSGATIKVDSSTIEGDE--CLIAISTKEFFEETFS 343
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
++A ++P C+ + +E D G+ S T RLLVP
Sbjct: 344 PTIEAAVR-----LQPRCSEK----------VERD--SGIIS--------FTTRLLVPTT 378
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
+GCL+GK G +I +R T ANIR++ + LP A DEMVQISG +VAK AL V
Sbjct: 379 RIGCLIGKGGSIITDMRRLTKANIRIISKENLPKIANEDDEMVQISGDLDVAKDALVHVL 438
Query: 310 TLLHQN 315
T L N
Sbjct: 439 TRLRAN 444
>gi|449527609|ref|XP_004170802.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 546
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 172/454 (37%), Positives = 268/454 (59%), Gaps = 63/454 (13%)
Query: 84 ASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVI 143
A +RN + KR ++Q G K+ R+Q +S+ DTVYR LCP +KIG VI
Sbjct: 2 AGQRNSYGKRNHSQSDYSENGGNKR-RSHGEDRDQFVIDSE--DTVYRYLCPVKKIGSVI 58
Query: 144 GKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESM 203
G+ G IVK LR +T++KI + +T+PGS+ERVI IYS+ + + +ES
Sbjct: 59 GRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNE------------TNSLEESS 106
Query: 204 EPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
+ AQ+AL K+HDR++ +D M D + +TARLLVP++ +GC++GK G ++Q
Sbjct: 107 DYVSPAQEALFKIHDRVVADDY---MDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQ 163
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK--P 321
+R+ETGA +R+L D LP CA+++DE+VQISG+P + K+ALY++++ LH NP + +
Sbjct: 164 NIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLL 223
Query: 322 PSSFPQAY-GGQNFHSPP--APMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRM 378
S+ P Y G + +P AP+ + PL +P+ GGY
Sbjct: 224 ASAIPGVYSSGGSLMAPTHGAPIMGLAPL----------------VSPY-GGY------- 259
Query: 379 GSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT 438
P + S EFS++++C IGGVIGKGG + Q++QET A+I V+ + T
Sbjct: 260 ------KAPREDLS--SKEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSAT 311
Query: 439 DSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TITTRLLVPSSKVGCI 494
+ D+ +I S+ E + S T++A L+LQ + SE E+ + TTRLLVP+S++GC+
Sbjct: 312 EGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCL 371
Query: 495 LGQGGHVINEMRRRTQADIRVVGA----RVKLQD 524
+G+GG +I E+RR T+A+IR++ +V L+D
Sbjct: 372 IGKGGAIITELRRLTKANIRILSKENLPKVALED 405
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 26/185 (14%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R++CP+ IGGVIGK G I+ +R+ET+A I V + ++ +I I S K +
Sbjct: 274 RLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISS------KEFFE 327
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
D S ++P C+ + +E D G+ S T RLLVP +
Sbjct: 328 DSYSPTLEAALRLQPRCSEK----------VERD--SGIIS--------FTTRLLVPTSR 367
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+GCL+GK G +I LR T ANIR+L + LP A+ DEMVQISG +VAK AL + T
Sbjct: 368 IGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVT 427
Query: 311 LLHQN 315
L N
Sbjct: 428 RLRAN 432
>gi|449447377|ref|XP_004141445.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 545
Score = 288 bits (737), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 172/454 (37%), Positives = 268/454 (59%), Gaps = 63/454 (13%)
Query: 84 ASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVI 143
A +RN + KR ++Q G K+ R+Q +S+ DTVYR LCP +KIG VI
Sbjct: 2 AGQRNSYGKRNHSQSDYSENGGNKR-RSHGEDRDQFVIDSE--DTVYRYLCPVKKIGSVI 58
Query: 144 GKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESM 203
G+ G IVK LR +T++KI + +T+PGS+ERVI IYS+ + + +ES
Sbjct: 59 GRGGEIVKQLRIDTKSKIRIGETVPGSDERVITIYSASNE------------TNSLEESS 106
Query: 204 EPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
+ AQ+AL K+HDR++ +D M D + +TARLLVP++ +GC++GK G ++Q
Sbjct: 107 DYVSPAQEALFKIHDRVVADDY---MDEDSEGGGHQVTARLLVPSDQIGCIIGKGGQIVQ 163
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK--P 321
+R+ETGA +R+L D LP CA+++DE+VQISG+P + K+ALY++++ LH NP + +
Sbjct: 164 NIRTETGAQVRILKDDHLPRCALSSDELVQISGEPLIVKKALYQIASRLHDNPSRSQHLL 223
Query: 322 PSSFPQAY-GGQNFHSPP--APMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRM 378
S+ P Y G + +P AP+ + PL +P+ GGY
Sbjct: 224 ASAIPGVYSSGGSLMAPTHGAPIMGLAPL----------------VSPY-GGY------- 259
Query: 379 GSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT 438
P + S EFS++++C IGGVIGKGG + Q++QET A+I V+ + T
Sbjct: 260 ------KAPREDLS--SKEFSLRLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSAT 311
Query: 439 DSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TITTRLLVPSSKVGCI 494
+ D+ +I S+ E + S T++A L+LQ + SE E+ + TTRLLVP+S++GC+
Sbjct: 312 EGDDCLINISSKEFFEDSYSPTLEAALRLQPRCSEKVERDSGIISFTTRLLVPTSRIGCL 371
Query: 495 LGQGGHVINEMRRRTQADIRVVGA----RVKLQD 524
+G+GG +I E+RR T+A+IR++ +V L+D
Sbjct: 372 IGKGGAIITELRRLTKANIRILSKENLPKVALED 405
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/185 (37%), Positives = 97/185 (52%), Gaps = 26/185 (14%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R++CP+ IGGVIGK G I+ +R+ET+A I V + ++ +I I S K +
Sbjct: 274 RLICPTENIGGVIGKGGAIINQIRQETKAAIKVDSSATEGDDCLINISS------KEFFE 327
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
D S ++P C+ + +E D G+ S T RLLVP +
Sbjct: 328 DSYSPTLEAALRLQPRCSEK----------VERD--SGIIS--------FTTRLLVPTSR 367
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+GCL+GK G +I LR T ANIR+L + LP A+ DEMVQISG +VAK AL + T
Sbjct: 368 IGCLIGKGGAIITELRRLTKANIRILSKENLPKVALEDDEMVQISGDLDVAKEALVHIVT 427
Query: 311 LLHQN 315
L N
Sbjct: 428 RLRAN 432
>gi|302767378|ref|XP_002967109.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
gi|300165100|gb|EFJ31708.1| hypothetical protein SELMODRAFT_87147 [Selaginella moellendorffii]
Length = 506
Score = 278 bits (711), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 166/396 (41%), Positives = 238/396 (60%), Gaps = 47/396 (11%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D VYRILCP KIG VIGK G+I+KSLR ET AKI VAD IPGS+ERVI I +SP + +
Sbjct: 45 DVVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISASPRERRE 104
Query: 187 TQ----NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
+ +K+ D E E P A+Q+AL KV RI+E + F N +TA
Sbjct: 105 GKPRGGSKEMDKDKEQNGEESTPLPASQEALFKVFARIVEGEEFDEDEDSSRN----VTA 160
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
RLLVP+N +GCLLGK G +I+++R E+GA IRVLP ++LP CA +TDE+VQ++G+ + K
Sbjct: 161 RLLVPSNQIGCLLGKAGKIIEQMRVESGAQIRVLPREQLPKCAYHTDELVQLTGELALVK 220
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
+AL +ST L+ NP +DKPP + + G S P + P + +P N+S+
Sbjct: 221 KALTTISTRLYDNPPRDKPPQA---GHLGPFQESTILPGTLLPP--GAFFPQGNASI--- 272
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
V EF++++LC KIG VIGKGG ++
Sbjct: 273 -----------------------------APVEGEFAVRLLCPNEKIGSVIGKGGMIIRS 303
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS--EKGTI 480
+++ET A I + DA +++ERVI ++ E L S ++A+LQLQ++ S+ S + G +
Sbjct: 304 IREETCARIKIADAVANAEERVIHITSNEVLHEQVSPALEAVLQLQSRISDPSAEKDGAM 363
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
TTR LVPS+ +GC+LG+ G +I +MRR T+A+IRV+
Sbjct: 364 TTRFLVPSANIGCLLGKKGSIIADMRRNTRANIRVL 399
Score = 128 bits (322), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 112/209 (53%), Gaps = 38/209 (18%)
Query: 108 KGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI 167
+GN S + E F R+LCP+ KIG VIGK G I++S+REET A+I +AD +
Sbjct: 267 QGNASIAPVEGEFA--------VRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAV 318
Query: 168 PGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
+EERVI I S+ E E + P A +A+L++ RI
Sbjct: 319 ANAEERVIHITSN----------------EVLHEQVSP---ALEAVLQLQSRI------- 352
Query: 228 GMASDDDNE-NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
SD E + +T R LVP+ +GCLLGK+G +I +R T ANIRVL + LP CA
Sbjct: 353 ---SDPSAEKDGAMTTRFLVPSANIGCLLGKKGSIIADMRRNTRANIRVLSKEALPKCAH 409
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQN 315
DE+VQ+ G VA+ A+ E+ T L N
Sbjct: 410 EDDELVQVVGDITVARDAVIEIITRLRAN 438
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 70/319 (21%), Positives = 124/319 (38%), Gaps = 87/319 (27%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ R+L P +G ++GK G +I+ LR+ETGA I+V AD +P +DE V
Sbjct: 46 VVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKV--ADGIP----GSDERV------- 92
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
+ +PR+ + + P G S ++
Sbjct: 93 ----------IFISASPRERR----------------------EGKPRGGSKEMDKDKEQ 120
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+G STP + + ++ + + + + S + ++L + +IG ++GK G
Sbjct: 121 NGEESTP-LPASQEALFKVFARIVEGEEFDEDEDSSRNVTARLLVPSNQIGCLLGKAGKI 179
Query: 420 VKQLQQETGASIHV---EDAPT---DSDERVIRASAFEGLWNPRSQTIDAILQL------ 467
++Q++ E+GA I V E P +DE +++ + L TI L
Sbjct: 180 IEQMRVESGAQIRVLPREQLPKCAYHTDE-LVQLTGELALVKKALTTISTRLYDNPPRDK 238
Query: 468 ----------------------------QNKTSEFSEKGTITTRLLVPSSKVGCILGQGG 499
Q S +G RLL P+ K+G ++G+GG
Sbjct: 239 PPQAGHLGPFQESTILPGTLLPPGAFFPQGNASIAPVEGEFAVRLLCPNEKIGSVIGKGG 298
Query: 500 HVINEMRRRTQADIRVVGA 518
+I +R T A I++ A
Sbjct: 299 MIIRSIREETCARIKIADA 317
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 7/60 (11%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+ R+L P +K+G ++G+GG +I +R T GA++K+ D PGS E ++ I S
Sbjct: 46 VVYRILCPGAKIGSVIGKGGSIIKSLRNET-------GAKIKVADGIPGSDERVIFISAS 98
>gi|356531744|ref|XP_003534436.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 540
Score = 277 bits (708), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 159/397 (40%), Positives = 239/397 (60%), Gaps = 45/397 (11%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
DTV+R LCP RKIG VIG+ G+IVK LR +T+AKI + D +PG +ERV+ I+SS +
Sbjct: 43 DTVFRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSSSEETNH 102
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
DD + P AQDAL +VH R+I ED + ++ +TA+LLV
Sbjct: 103 FDETDD---------LVSP---AQDALFRVHQRVIAEDAREDEDEERNH----VTAKLLV 146
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P++ +GC++GK G ++Q +RSETGA IR+L DRLPPCA++TDE+VQISG+ V K+AL+
Sbjct: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPPCALSTDELVQISGEAAVVKKALF 206
Query: 307 EVSTLLHQNPRKDK--PPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPS 364
+++ + NP + + S+ P Y + P + + G+
Sbjct: 207 QIAAQIRDNPSRSQHLLASAVPGGYA-------------------TGGPGAGAPIMGV-- 245
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSA-EFSMKILCSAGKIGGVIGKGGFNVKQL 423
P++G YG G S S P E S EFS++ +C G IGGVIGKGG + Q+
Sbjct: 246 APFVGAYGGYKGDTGDWS-RSLYPAPRDEASMREFSVRFVCPTGNIGGVIGKGGAIINQI 304
Query: 424 QQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----T 479
+Q++GA+I V+ + T+ D+ +I S E + S TI+A ++LQ + SE E+ +
Sbjct: 305 RQDSGATIKVDSSATEGDDCLIIISTKEFFEDSFSPTIEAAVRLQPRCSEKVERDSGIVS 364
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
TTRLLVP+S++GC++G+GG ++ EMRR T+A+IR++
Sbjct: 365 FTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRIL 401
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 75/220 (34%), Positives = 111/220 (50%), Gaps = 31/220 (14%)
Query: 109 GNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
G+WS S + + R +CP+ IGGVIGK G I+ +R+++ A I V +
Sbjct: 260 GDWSRSLYPAPRDEASMREFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSAT 319
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKES--MEPHCAAQDALLKVHDRIIEEDLF 226
++ +III T+ +DS + T + + ++P C+ + +E D
Sbjct: 320 EGDDCLIII--------STKEFFEDSFSPTIEAAVRLQPRCSEK----------VERD-- 359
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
G+ S T RLLVP + +GCL+GK G ++ +R T ANIR+L D LP A
Sbjct: 360 SGIVS--------FTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKDNLPKIAS 411
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNP-RKDKPPSSF 325
DEMVQISG +VAK AL + T L N K++ S F
Sbjct: 412 EDDEMVQISGDLDVAKDALVQALTRLRANLFDKERAVSGF 451
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEH 542
R L P K+G ++G+GG ++ ++R T+A IR+ D PG E +V I SSE
Sbjct: 47 RYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRI-------GDALPGCDERVVTIHSSSEE 99
>gi|168013158|ref|XP_001759268.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689581|gb|EDQ75952.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 427
Score = 273 bits (698), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 168/405 (41%), Positives = 248/405 (61%), Gaps = 40/405 (9%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D V+RILCP+ KIG VIGK G+I+K+LR+E+ AKI +AD IPG +ERVI+I S+ +
Sbjct: 2 DVVFRILCPAPKIGSVIGKGGSIIKTLRQESGAKIKIADAIPGVDERVILISSTDRGNDR 61
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST--ITARL 244
+ KD +S E + P AQ+AL KVH RII + G+ D E + + RL
Sbjct: 62 GRGKDGNS------EELTP---AQEALFKVHARIIADVETSGIDGSDQEEEPSQQVVTRL 112
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVPNN +GCLLGK G +I+++R TGA IRVLP D+LP CA+ TDE+VQ+SG + K+A
Sbjct: 113 LVPNNQIGCLLGKGGKIIEQMRQTTGAQIRVLPKDQLPGCALPTDELVQVSGDVSTLKKA 172
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSP-PAPMADMHPLGNSSWPARNSS-LHGM 362
L +S L +NP +D+P Q++ +P PA + L S+ ++ + + G+
Sbjct: 173 LLFISARLQENPPRDRP----------QSYAAPAPAFVPVTDYLAKDSYRSKGTGHVFGL 222
Query: 363 PSTPWMGGYGDQPSRMGSGSIN--------SCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
P G + + SG+++ S GE E ++LC + KIG VIG
Sbjct: 223 GPEPLEG----RSWTISSGNLSLDRQDNRRSKEGRDSGE--NELVFRLLCPSDKIGSVIG 276
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNK-TSE 473
KGG + L+++TGA I + +A SDERVI SA E + S ++A++Q+Q++ T+E
Sbjct: 277 KGGSIIHNLRKDTGARIKIANAVPGSDERVIIVSALELPGDSFSPALEAMIQVQSRITAE 336
Query: 474 F--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ G ITTRLLVP++++GC+LG+GG +I +MRR T+A+IRV+
Sbjct: 337 MGGDKDGIITTRLLVPTNQIGCLLGKGGSIIEDMRRATRANIRVL 381
Score = 159 bits (402), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 93/214 (43%), Positives = 127/214 (59%), Gaps = 31/214 (14%)
Query: 106 IKKGNWS----NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKI 161
I GN S ++ R + +S + V+R+LCPS KIG VIGK G+I+ +LR++T A+I
Sbjct: 234 ISSGNLSLDRQDNRRSKEGRDSGENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDTGARI 293
Query: 162 TVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRII 221
+A+ +PGS+ERVII+ SA E +S P A +A+++V RI
Sbjct: 294 KIANAVPGSDERVIIV----------------SALELPGDSFSP---ALEAMIQVQSRIT 334
Query: 222 EEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRL 281
E M D D IT RLLVP N +GCLLGK G +I+ +R T ANIRVLP D L
Sbjct: 335 AE-----MGGDKDG---IITTRLLVPTNQIGCLLGKGGSIIEDMRRATRANIRVLPKDTL 386
Query: 282 PPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQN 315
P CA++TDE+VQI G VA+ AL++V + L N
Sbjct: 387 PRCALDTDELVQIVGDTTVAREALFQVISRLRNN 420
Score = 47.0 bits (110), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 454 WNPRSQTIDAILQLQNKTSEFSEKGT--ITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
W S + Q ++ E + G + RLL PS K+G ++G+GG +I+ +R+ T
Sbjct: 232 WTISSGNLSLDRQDNRRSKEGRDSGENELVFRLLCPSDKIGSVIGKGGSIIHNLRKDT-- 289
Query: 512 DIRVVGARVKLQDPHPGSSECIV 534
GAR+K+ + PGS E ++
Sbjct: 290 -----GARIKIANAVPGSDERVI 307
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDI 536
+ R+L P+ K+G ++G+GG +I +R+ + GA++K+ D PG E ++ I
Sbjct: 3 VVFRILCPAPKIGSVIGKGGSIIKTLRQES-------GAKIKIADAIPGVDERVILI 52
>gi|225452863|ref|XP_002283766.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|296082939|emb|CBI22240.3| unnamed protein product [Vitis vinifera]
Length = 548
Score = 271 bits (694), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 173/442 (39%), Positives = 268/442 (60%), Gaps = 47/442 (10%)
Query: 84 ASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVI 143
A +RN + KR ++Q G K+ N + + +P DTVYR LCP RKIG +I
Sbjct: 2 AGQRNSYGKRAHSQSDYGDNGGNKRRNPGDDRDPFTI---EPEDTVYRYLCPGRKIGSII 58
Query: 144 GKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESM 203
G+ G IVK LR +T++KI + +T+PG EERV+ IYSS D+ +A + +
Sbjct: 59 GRGGEIVKQLRVDTKSKIRIGETVPGCEERVVTIYSS---------SDETNAFDDSDTFV 109
Query: 204 EPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
P AQDAL +VHDR++ E++ G +D E S +T RLLVP++ +GC++GK G +IQ
Sbjct: 110 SP---AQDALFRVHDRVVSEEVHG----EDSEEASQVTVRLLVPSDQIGCVIGKGGQIIQ 162
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK--P 321
+RSE+GA +R+L D LP CA+++DE+VQISG+P++ ++ALY++++ LH NP + +
Sbjct: 163 SIRSESGAQVRILKDDHLPSCALSSDELVQISGEPSLVRKALYQIASRLHDNPSRSQHLL 222
Query: 322 PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMG-- 379
S+ P Y G+ P + + G+ P +G YG G
Sbjct: 223 ASAVPTGYSSG---------------GSLMGPTSGAPIMGL--APLVGTYGGYRGDSGDW 265
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED-APT 438
S S+ S P + S EFS++++C G IGGVIGKGG + Q++QE+GA+I V+ +
Sbjct: 266 SRSLYSAPRDEAS--SKEFSLRLVCPIGNIGGVIGKGGVIINQIRQESGAAIKVDSTSAA 323
Query: 439 DSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TITTRLLVPSSKVGCI 494
++D+ +I SA E + S TI+A ++LQ + SE E+ + TTRLLVP+S++GC+
Sbjct: 324 EADDCLIAISAKEFFEDTFSPTIEAAVRLQPRCSEKVERDSGIVSFTTRLLVPTSRIGCL 383
Query: 495 LGQGGHVINEMRRRTQADIRVV 516
+G+GG +I EMR+ T+A+IR++
Sbjct: 384 IGKGGAIITEMRKLTKANIRIL 405
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 71/207 (34%), Positives = 103/207 (49%), Gaps = 25/207 (12%)
Query: 109 GNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
G+WS S + + R++CP IGGVIGK G I+ +R+E+ A I V T
Sbjct: 263 GDWSRSLYSAPRDEASSKEFSLRLVCPIGNIGGVIGKGGVIINQIRQESGAAIKVDSTSA 322
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
+ +I S+ T + ++A ++P C+ + +E D G
Sbjct: 323 AEADDCLIAISAKEFFEDTFSPTIEAAVR-----LQPRCSEK----------VERD--SG 365
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+ S T RLLVP + +GCL+GK G +I +R T ANIR+L + LP A
Sbjct: 366 IVS--------FTTRLLVPTSRIGCLIGKGGAIITEMRKLTKANIRILSKENLPKVASED 417
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQN 315
DEMVQI+G +VAK AL +V+T L N
Sbjct: 418 DEMVQIAGDLDVAKDALIQVTTRLRAN 444
>gi|148905782|gb|ABR16055.1| unknown [Picea sitchensis]
Length = 650
Score = 271 bits (693), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 185/418 (44%), Positives = 253/418 (60%), Gaps = 25/418 (5%)
Query: 112 SNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE 171
S + REQ+ + TVYRILCPS IG VIGK G ++KS+R+ET++KI VAD +PG +
Sbjct: 28 SGTGREQTMPGAD--STVYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVD 85
Query: 172 ERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMAS 231
ERVI+I+SSP K + EP C AQD LL+VH I++E G +
Sbjct: 86 ERVIVIFSSPLSKDKE------KDDDDDDNENEPVCPAQDGLLRVHSVIVQES--SGKDN 137
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
D D + ARLLV N+ +G L+GK G+ IQ+LRSE+GA I++ D LP CA + DE+
Sbjct: 138 DADKKRPQ-DARLLVANSQIGSLIGKGGNNIQKLRSESGAQIQIPRKDELPGCAFSFDEL 196
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA----PMADMHPL 347
V ISG K+ALY VS L ++P K++ P S Q+ P P A+ P
Sbjct: 197 VVISGDAAAVKKALYAVSAFLFKHPPKEQIPWSVILPETNQSSLPPSGVPTFPPANYLPQ 256
Query: 348 GNSSWPARNSS--LHGMPS-TPWMGGYGDQPSRMGSGSINSCPP------GQMGEVSAEF 398
G+S + N S + G S P +GGYG + S + P + S EF
Sbjct: 257 GDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPLSNPALPSFSKFGNSTTKKTSEEF 316
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRS 458
S+++LC KIGGVIGKGG +K ++ +TGASI VEDA T+SDERVI SA E + S
Sbjct: 317 SIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVVSATELADDRVS 376
Query: 459 QTIDAILQLQNKTSEFSEK-GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
TI+A+L LQ KTS ++K G I+TR LVPS +GC+LG+GG++I+EMR++T+A+IR+
Sbjct: 377 PTIEAVLLLQGKTSGTTDKDGAISTRFLVPSKHIGCLLGKGGNIISEMRKQTRANIRI 434
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 112/359 (31%), Positives = 170/359 (47%), Gaps = 72/359 (20%)
Query: 120 FGNSQPADTV----YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVI 175
FGNS T R+LCP+ KIGGVIGK GN +KS+R +T A I V D S+ERVI
Sbjct: 304 FGNSTTKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVI 363
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN 235
++ SA E + + P +A+L L G S +
Sbjct: 364 VV----------------SATELADDRVSPTI---EAVL----------LLQGKTSGTTD 394
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
++ I+ R LVP+ +GCLLGK G++I +R +T ANIR+ D P C +E+VQ++
Sbjct: 395 KDGAISTRFLVPSKHIGCLLGKGGNIISEMRKQTRANIRIFRKDERPICVSENEELVQVT 454
Query: 296 GKPNVAKRALYEVSTLLHQNPRKDKP----------------PSSFP--QAYGGQNFH-- 335
G+P VAK AL ++ L +N KDK PS+ P +YG + +
Sbjct: 455 GEPGVAKDALIQILKRLRENIFKDKDGASNTDSVLPLSSLSVPSAVPLSSSYGTRKYDIV 514
Query: 336 SPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSR-----MGSGSINSCPPGQ 390
SP +A G S + A + G S + Y P+R + G +NS
Sbjct: 515 SPRGAIAGRSAAGLSGFGALQA---GTGSYASLQPYA--PTRTFGIGLSGGHLNSS---- 565
Query: 391 MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA 449
++ I SA + V+G+GG N+ +++ +GA++ + D T + +RV+ S
Sbjct: 566 ---LAPSHEFAIPNSA--VSSVLGRGGSNISHIREISGATVKLRDPITGASDRVVEISG 619
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 486 VPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLIS 545
+P+S V +LG+GG I+ +R + GA VKL+DP G+S+ +V+I G+ E +
Sbjct: 574 IPNSAVSSVLGRGGSNISHIRE-------ISGATVKLRDPITGASDRVVEISGTPEQSHA 626
Query: 546 AHGTYQSFMTSGQSMKVQPSS 566
A Q+FM +GQS + + +S
Sbjct: 627 AQSLIQAFMLTGQSQQSRMTS 647
Score = 42.4 bits (98), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDI 536
R+L PS+ +G ++G+GG VI MR+ T++ IRV D PG E ++ I
Sbjct: 45 RILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVA-------DAVPGVDERVIVI 91
>gi|297807547|ref|XP_002871657.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297317494|gb|EFH47916.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 544
Score = 267 bits (683), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 156/395 (39%), Positives = 239/395 (60%), Gaps = 38/395 (9%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
DTV+R LCP +KIG VIG+ G IVK LR +T++KI + + IPG +ERVI IYS
Sbjct: 43 DTVFRYLCPVKKIGSVIGRGGEIVKQLRMDTRSKIRIGEAIPGCDERVITIYSP------ 96
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
D+ +A ++ + P AQDAL ++HDR++ +D + D +TA+LLV
Sbjct: 97 ---SDETNAFGDGEKVLSP---AQDALFRIHDRVVADD---AQSEDSSEGEQQVTAKLLV 147
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P++ +GC+LG+ G ++Q +RSETGA IR++ +P CA+N+DE++QISG+ + K+AL+
Sbjct: 148 PSDQIGCILGRGGQIVQNIRSETGAQIRIIKDRNMPLCALNSDELIQISGEVLIVKKALH 207
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTP 366
++++ LH+NP + QN S + ++ +P G+ A L G+ P
Sbjct: 208 QIASRLHENPSR------------SQNLLS--SAISGGYPSGSLMSHAGGPRLVGI--AP 251
Query: 367 WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQE 426
MG YG G S P + + EF ++++ I VIGKGG + QL+QE
Sbjct: 252 LMGSYGRDG---GDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGALINQLRQE 308
Query: 427 TGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TITT 482
T A+I V+ + T+ ++ +I SA E + S TI+A+++LQ K SE E+ + TT
Sbjct: 309 TRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSEKVERDSGLVSFTT 368
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
RLLVPSS++GCILG+GG +I EMRR T+A+IR++G
Sbjct: 369 RLLVPSSRIGCILGKGGAIITEMRRMTKANIRILG 403
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/214 (32%), Positives = 103/214 (48%), Gaps = 26/214 (12%)
Query: 102 GVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKI 161
G G G+WS + + + R++ P I VIGK G ++ LR+ET+A I
Sbjct: 254 GSYGRDGGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGALINQLRQETRATI 313
Query: 162 TVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRII 221
V + + +I I SA E +++ P A L +
Sbjct: 314 KVDSSRTEGNDCLITI----------------SAREVFEDAYSPTIEAVMRLQPKCSEKV 357
Query: 222 EEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRL 281
E D G+ S T RLLVP++ +GC+LGK G +I +R T ANIR+L + L
Sbjct: 358 ERD--SGLVS--------FTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKENL 407
Query: 282 PPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQN 315
P A + DEMVQISG+ +VAK AL ++++ L N
Sbjct: 408 PKVASDDDEMVQISGELDVAKEALIQITSRLRAN 441
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 74/135 (54%), Gaps = 15/135 (11%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI-------RASAFEG 452
+ LC KIG VIG+GG VKQL+ +T + I + +A DERVI +AF
Sbjct: 46 FRYLCPVKKIGSVIGRGGEIVKQLRMDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGD 105
Query: 453 LWNPRSQTIDAILQLQNKT------SEFSEKGT--ITTRLLVPSSKVGCILGQGGHVINE 504
S DA+ ++ ++ SE S +G +T +LLVPS ++GCILG+GG ++
Sbjct: 106 GEKVLSPAQDALFRIHDRVVADDAQSEDSSEGEQQVTAKLLVPSDQIGCILGRGGQIVQN 165
Query: 505 MRRRTQADIRVVGAR 519
+R T A IR++ R
Sbjct: 166 IRSETGAQIRIIKDR 180
>gi|302754958|ref|XP_002960903.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
gi|300171842|gb|EFJ38442.1| hypothetical protein SELMODRAFT_73985 [Selaginella moellendorffii]
Length = 502
Score = 266 bits (681), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 163/394 (41%), Positives = 233/394 (59%), Gaps = 47/394 (11%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D VYRILCP KIG VIGK G+I+KSLR ET AKI VAD IPGS+ERVI I + K
Sbjct: 45 DVVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKVADGIPGSDERVIFISPRERREGK 104
Query: 187 TQ--NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
+ +K+ D E E P A+Q+AL KV RI+E + F N +TARL
Sbjct: 105 PRGGSKEMDKDKEQNGEESTPLPASQEALFKVFARIVEGEEFDEDEDSSRN----VTARL 160
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP+N +GCLLGK G +I+++R E+GA IRVLP ++LP CA +TDE+ ++G+ + K+A
Sbjct: 161 LVPSNQIGCLLGKAGKIIEQMRVESGAQIRVLPREQLPKCAYHTDEL--LTGELALVKKA 218
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPS 364
L +ST L+ NP +DKPP + + G S P + P + +P N+S+
Sbjct: 219 LTTISTRLYDNPPRDKPPQA---GHLGPFQESTILPGTLLPP--GAFFPQGNASI----- 268
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQ 424
V EF++++LC KIG VIGKGG ++ ++
Sbjct: 269 ---------------------------APVEGEFAVRLLCPNEKIGSVIGKGGMIIRSIR 301
Query: 425 QETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS--EKGTITT 482
+ET A I + DA +++ERVI ++ E L S ++A+LQLQ++ S+ S + G +TT
Sbjct: 302 EETCARIKIADAVANAEERVIHITSNEVLHEQVSPALEAVLQLQSRISDPSAEKDGAMTT 361
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
R LVPS+ +GC+LG+ G +I +MRR T+A+IRV+
Sbjct: 362 RFLVPSANIGCLLGKKGSIIADMRRNTRANIRVL 395
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 112/209 (53%), Gaps = 38/209 (18%)
Query: 108 KGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI 167
+GN S + E F R+LCP+ KIG VIGK G I++S+REET A+I +AD +
Sbjct: 263 QGNASIAPVEGEFA--------VRLLCPNEKIGSVIGKGGMIIRSIREETCARIKIADAV 314
Query: 168 PGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
+EERVI I S+ E E + P A +A+L++ RI
Sbjct: 315 ANAEERVIHITSN----------------EVLHEQVSP---ALEAVLQLQSRI------- 348
Query: 228 GMASDDDNE-NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
SD E + +T R LVP+ +GCLLGK+G +I +R T ANIRVL + LP CA
Sbjct: 349 ---SDPSAEKDGAMTTRFLVPSANIGCLLGKKGSIIADMRRNTRANIRVLSKEALPKCAH 405
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQN 315
DE+VQ+ G VA+ A+ E+ T L N
Sbjct: 406 EDDELVQVVGDITVARDAVIEIITRLRAN 434
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 127/316 (40%), Gaps = 85/316 (26%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ R+L P +G ++GK G +I+ LR+ETGA I+V AD +P +DE V
Sbjct: 46 VVYRILCPGAKIGSVIGKGGSIIKSLRNETGAKIKV--ADGIP----GSDERV------- 92
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
+ +PR+ + + P G S ++
Sbjct: 93 ------------IFISPRERR----------------------EGKPRGGSKEMDKDKEQ 118
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+G STP + + ++ + + + + S + ++L + +IG ++GK G
Sbjct: 119 NGEESTP-LPASQEALFKVFARIVEGEEFDEDEDSSRNVTARLLVPSNQIGCLLGKAGKI 177
Query: 420 VKQLQQETGASIHV---EDAPT---DSDERVIRASAF---------EGLWN--PRSQ--- 459
++Q++ E+GA I V E P +DE + A L++ PR +
Sbjct: 178 IEQMRVESGAQIRVLPREQLPKCAYHTDELLTGELALVKKALTTISTRLYDNPPRDKPPQ 237
Query: 460 ----------TIDAILQL-------QNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVI 502
TI L Q S +G RLL P+ K+G ++G+GG +I
Sbjct: 238 AGHLGPFQESTILPGTLLPPGAFFPQGNASIAPVEGEFAVRLLCPNEKIGSVIGKGGMII 297
Query: 503 NEMRRRTQADIRVVGA 518
+R T A I++ A
Sbjct: 298 RSIREETCARIKIADA 313
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDI 536
+ R+L P +K+G ++G+GG +I +R T GA++K+ D PGS E ++ I
Sbjct: 46 VVYRILCPGAKIGSVIGKGGSIIKSLRNET-------GAKIKVADGIPGSDERVIFI 95
>gi|7671496|emb|CAB89337.1| putative protein [Arabidopsis thaliana]
Length = 568
Score = 266 bits (680), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 155/395 (39%), Positives = 236/395 (59%), Gaps = 40/395 (10%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
DTV+R LCP +KIG VIG+ G+IVK LR +T++KI + + IPG +ERVI IYS
Sbjct: 49 DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSP------ 102
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
D+ +A ++ + P AQDAL ++HDR++ +D + D +TA+LLV
Sbjct: 103 ---SDETNAFGDGEKVLSP---AQDALFRIHDRVVADD---ARSEDSPEGEKQVTAKLLV 153
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P++ +GC+LG+ G ++Q +RSETGA IR++ +P CA+N+DE++QISG+ + K+AL
Sbjct: 154 PSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALL 213
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTP 366
++++ LH+NP + QN S +P G+ A L G+ P
Sbjct: 214 QIASRLHENPSR------------SQNLLSSSGG----YPAGSLMSHAGGPRLVGL--AP 255
Query: 367 WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQE 426
MG YG G S P + + EF ++++ I VIGKGG + QL+QE
Sbjct: 256 LMGSYGRD---AGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGALINQLRQE 312
Query: 427 TGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TITT 482
T A+I V+ + T+ ++ +I SA E + S TI+A+++LQ K S+ E+ + TT
Sbjct: 313 TRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVSFTT 372
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
RLLVPSS++GCILG+GG +I EMRR T+A+IR++G
Sbjct: 373 RLLVPSSRIGCILGKGGAIITEMRRMTKANIRILG 407
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/250 (28%), Positives = 106/250 (42%), Gaps = 63/250 (25%)
Query: 102 GVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKI 161
G G G+WS + + + R++ P I VIGK G ++ LR+ET+A I
Sbjct: 258 GSYGRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGALINQLRQETRATI 317
Query: 162 TVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALL-KVHDRI 220
V + + +I I SA E +++ P A L K D++
Sbjct: 318 KVDSSRTEGNDCLITI----------------SAREVFEDAYSPTIEAVMRLQPKCSDKV 361
Query: 221 IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
E D G+ S T RLLVP++ +GC+LGK G +I +R T ANIR+L +
Sbjct: 362 -ERD--SGLVS--------FTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKEN 410
Query: 281 LPPCAMNTDEM-----------------------------------VQISGKPNVAKRAL 305
LP A + DEM VQISG+ +VAK AL
Sbjct: 411 LPKVASDDDEMVQVNFMVLLLKFSLQFLLSRLRYFTWSVNSNSNFDVQISGELDVAKEAL 470
Query: 306 YEVSTLLHQN 315
++++ L N
Sbjct: 471 IQITSRLRAN 480
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 15/135 (11%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI-------RASAFEG 452
+ LC KIG VIG+GG VKQL+ +T + I + +A DERVI +AF
Sbjct: 52 FRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGD 111
Query: 453 LWNPRSQTIDAILQLQNKT------SEFSEKGT--ITTRLLVPSSKVGCILGQGGHVINE 504
S DA+ ++ ++ SE S +G +T +LLVPS ++GCILG+GG ++
Sbjct: 112 GEKVLSPAQDALFRIHDRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQN 171
Query: 505 MRRRTQADIRVVGAR 519
+R T A IR+V R
Sbjct: 172 IRSETGAQIRIVKDR 186
>gi|413955311|gb|AFW87960.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
gi|413955312|gb|AFW87961.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 543
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 176/404 (43%), Positives = 246/404 (60%), Gaps = 49/404 (12%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P DTVYR LC SRKIG +IG+ G I K LR ETQAKI + +++PG EERVI I+SS
Sbjct: 35 PDDTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSS---- 90
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
++ N DD AE K C AQDAL +VH+R+ ++ FG D + + +T RL
Sbjct: 91 SRRTNTIDD--AEDKV------CPAQDALFRVHERLATDESFGN--EDSEEISPQVTVRL 140
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP++ +GC+LGK G +IQ +RSETGA IRVL D +P CA++ DE++QISG V K+A
Sbjct: 141 LVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKDHIPACAISGDELLQISGDMVVVKKA 200
Query: 305 LYEVSTLLHQNPRKDKP--PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
L +VS+ LH NP K + SS Q Y G H G+S+ P +
Sbjct: 201 LCQVSSRLHNNPSKSQHLLASSLTQPYPGGT-----------HLGGSSAAPVVGIT---- 245
Query: 363 PSTPWMGGY-----GDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
P P GGY GD PS P + + EFS+++LC+A +GGVIGKGG
Sbjct: 246 PVIPPYGGYKGDVAGDWPSLY--------QPRRDESSAKEFSLRLLCAAANVGGVIGKGG 297
Query: 418 FNVKQLQQETGASIHVEDAPTD-SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSE 476
+KQ++QE+GA I V + +D D+ +I SA E +P S TIDA ++LQ + SE S+
Sbjct: 298 GIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQLRCSEKSD 357
Query: 477 ----KGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ + TTRLLV +S++GC++G+GG +I E+RR ++A+IR++
Sbjct: 358 SELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRIL 401
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 11/148 (7%)
Query: 183 KIAKTQNKDDDSAAET--KKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
K+A + + DD T KE E P DA +++ R E+ SD + +
Sbjct: 312 KVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQLRCSEK-------SDSELAEQS 364
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
T RLLV + +GCL+GK G +I +R + ANIR+L + +P A +EMVQISG +
Sbjct: 365 YTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGGLD 424
Query: 300 VAKRALYEVSTLLHQN-PRKDKPPSSFP 326
VA+ AL +++T L N ++ S+FP
Sbjct: 425 VARHALVQIATRLKANFFEREGSLSAFP 452
>gi|413955310|gb|AFW87959.1| hypothetical protein ZEAMMB73_110576 [Zea mays]
Length = 528
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 176/404 (43%), Positives = 246/404 (60%), Gaps = 49/404 (12%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P DTVYR LC SRKIG +IG+ G I K LR ETQAKI + +++PG EERVI I+SS
Sbjct: 35 PDDTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCEERVITIFSS---- 90
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
++ N DD AE K C AQDAL +VH+R+ ++ FG D + + +T RL
Sbjct: 91 SRRTNTIDD--AEDKV------CPAQDALFRVHERLATDESFGN--EDSEEISPQVTVRL 140
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP++ +GC+LGK G +IQ +RSETGA IRVL D +P CA++ DE++QISG V K+A
Sbjct: 141 LVPSDQIGCILGKGGHIIQGIRSETGAQIRVLSKDHIPACAISGDELLQISGDMVVVKKA 200
Query: 305 LYEVSTLLHQNPRKDK--PPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
L +VS+ LH NP K + SS Q Y G H G+S+ P +
Sbjct: 201 LCQVSSRLHNNPSKSQHLLASSLTQPYPGGT-----------HLGGSSAAPVVGIT---- 245
Query: 363 PSTPWMGGY-----GDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
P P GGY GD PS P + + EFS+++LC+A +GGVIGKGG
Sbjct: 246 PVIPPYGGYKGDVAGDWPSLY--------QPRRDESSAKEFSLRLLCAAANVGGVIGKGG 297
Query: 418 FNVKQLQQETGASIHVEDAPTD-SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSE 476
+KQ++QE+GA I V + +D D+ +I SA E +P S TIDA ++LQ + SE S+
Sbjct: 298 GIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQLRCSEKSD 357
Query: 477 ----KGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ + TTRLLV +S++GC++G+GG +I E+RR ++A+IR++
Sbjct: 358 SELAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRIL 401
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 11/148 (7%)
Query: 183 KIAKTQNKDDDSAAET--KKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
K+A + + DD T KE E P DA +++ R E+ SD + +
Sbjct: 312 KVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQLRCSEK-------SDSELAEQS 364
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
T RLLV + +GCL+GK G +I +R + ANIR+L + +P A +EMVQISG +
Sbjct: 365 YTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGGLD 424
Query: 300 VAKRALYEVSTLLHQN-PRKDKPPSSFP 326
VA+ AL +++T L N ++ S+FP
Sbjct: 425 VARHALVQIATRLKANFFEREGSLSAFP 452
>gi|356568682|ref|XP_003552539.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 543
Score = 266 bits (680), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 157/400 (39%), Positives = 239/400 (59%), Gaps = 51/400 (12%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
DTV+R LCP RKIG VIG+ G+IVK LR +T+AKI + D +PG +ERV+ I+SS ++
Sbjct: 43 DTVFRYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRIGDALPGCDERVVTIHSS----SE 98
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
N D++ + + P AQDAL +VH R+I ED + ++ +TA+LLV
Sbjct: 99 ETNHFDETG-----DLVSP---AQDALFRVHQRVIAEDAREDEDDERNH----VTAKLLV 146
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P++ +GC++GK G ++Q +RSETGA IR+L DRLPPCA++ DE+VQISG+ V K+AL+
Sbjct: 147 PSDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPPCALSNDELVQISGEAAVVKKALF 206
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHG----- 361
+++ + NP + + H L ++ + G
Sbjct: 207 QIAAQIRDNPSRSQ------------------------HLLASAVPGGYAAGGPGAGAPI 242
Query: 362 MPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSA-EFSMKILCSAGKIGGVIGKGGFNV 420
M P++G YG G S S P E S EFS++ +C G IGGVIGKGG +
Sbjct: 243 MGVAPFVGAYGGYKGDTGDWS-RSLYPAPRDEASMREFSVRFVCPTGNIGGVIGKGGAII 301
Query: 421 KQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG-- 478
Q++Q++GA+I V+ + T+ D+ +I S E + S TI+A ++LQ + SE E+
Sbjct: 302 NQIRQDSGATIKVDSSATEGDDCLIIISMKEFFEDSFSPTIEAAVRLQPRCSEKVERDSG 361
Query: 479 --TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ TTRLLVP+S++GC++G+GG ++ EMRR T+A+IR++
Sbjct: 362 IVSFTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRIL 401
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/218 (33%), Positives = 106/218 (48%), Gaps = 27/218 (12%)
Query: 109 GNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
G+WS S + + R +CP+ IGGVIGK G I+ +R+++ A I V +
Sbjct: 260 GDWSRSLYPAPRDEASMREFSVRFVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSAT 319
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
++ +III K +D S ++P C+ + +E D G
Sbjct: 320 EGDDCLIIIS------MKEFFEDSFSPTIEAAVRLQPRCSEK----------VERD--SG 361
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+ S T RLLVP + +GCL+GK G ++ +R T ANIR+L + LP A
Sbjct: 362 IVS--------FTTRLLVPTSRIGCLIGKGGTIVTEMRRLTKANIRILSKENLPKIASED 413
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNP-RKDKPPSSF 325
DEMVQISG +VAK AL + T L N K++ S F
Sbjct: 414 DEMVQISGDLDVAKDALVQALTRLRANLFDKERAVSGF 451
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 7/60 (11%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEH 542
R L P K+G ++G+GG ++ ++R T+A IR+ D PG E +V I SSE
Sbjct: 47 RYLCPVRKIGSVIGRGGDIVKQLRADTKAKIRI-------GDALPGCDERVVTIHSSSEE 99
>gi|30685269|ref|NP_851040.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30685276|ref|NP_197031.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|110737265|dbj|BAF00580.1| hypothetical protein [Arabidopsis thaliana]
gi|110738501|dbj|BAF01176.1| hypothetical protein [Arabidopsis thaliana]
gi|332004758|gb|AED92141.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004759|gb|AED92142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 548
Score = 265 bits (678), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 155/395 (39%), Positives = 236/395 (59%), Gaps = 40/395 (10%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
DTV+R LCP +KIG VIG+ G+IVK LR +T++KI + + IPG +ERVI IYS
Sbjct: 49 DTVFRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSP------ 102
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
D+ +A ++ + P AQDAL ++HDR++ +D + D +TA+LLV
Sbjct: 103 ---SDETNAFGDGEKVLSP---AQDALFRIHDRVVADD---ARSEDSPEGEKQVTAKLLV 153
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P++ +GC+LG+ G ++Q +RSETGA IR++ +P CA+N+DE++QISG+ + K+AL
Sbjct: 154 PSDQIGCILGRGGQIVQNIRSETGAQIRIVKDRNMPLCALNSDELIQISGEVLIVKKALL 213
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTP 366
++++ LH+NP + QN S +P G+ A L G+ P
Sbjct: 214 QIASRLHENPSR------------SQNLLSSSGG----YPAGSLMSHAGGPRLVGL--AP 255
Query: 367 WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQE 426
MG YG G S P + + EF ++++ I VIGKGG + QL+QE
Sbjct: 256 LMGSYGRD---AGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGALINQLRQE 312
Query: 427 TGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TITT 482
T A+I V+ + T+ ++ +I SA E + S TI+A+++LQ K S+ E+ + TT
Sbjct: 313 TRATIKVDSSRTEGNDCLITISAREVFEDAYSPTIEAVMRLQPKCSDKVERDSGLVSFTT 372
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
RLLVPSS++GCILG+GG +I EMRR T+A+IR++G
Sbjct: 373 RLLVPSSRIGCILGKGGAIITEMRRMTKANIRILG 407
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/215 (33%), Positives = 106/215 (49%), Gaps = 28/215 (13%)
Query: 102 GVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKI 161
G G G+WS + + + R++ P I VIGK G ++ LR+ET+A I
Sbjct: 258 GSYGRDAGDWSRPLYQPPRNDPPATEFFIRLVSPVENIASVIGKGGALINQLRQETRATI 317
Query: 162 TVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALL-KVHDRI 220
V + + +I I SA E +++ P A L K D++
Sbjct: 318 KVDSSRTEGNDCLITI----------------SAREVFEDAYSPTIEAVMRLQPKCSDKV 361
Query: 221 IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
E D G+ S T RLLVP++ +GC+LGK G +I +R T ANIR+L +
Sbjct: 362 -ERD--SGLVS--------FTTRLLVPSSRIGCILGKGGAIITEMRRMTKANIRILGKEN 410
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQN 315
LP A + DEMVQISG+ +VAK AL ++++ L N
Sbjct: 411 LPKVASDDDEMVQISGELDVAKEALIQITSRLRAN 445
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 74/135 (54%), Gaps = 15/135 (11%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI-------RASAFEG 452
+ LC KIG VIG+GG VKQL+ +T + I + +A DERVI +AF
Sbjct: 52 FRYLCPVKKIGSVIGRGGDIVKQLRNDTRSKIRIGEAIPGCDERVITIYSPSDETNAFGD 111
Query: 453 LWNPRSQTIDAILQLQNKT------SEFSEKGT--ITTRLLVPSSKVGCILGQGGHVINE 504
S DA+ ++ ++ SE S +G +T +LLVPS ++GCILG+GG ++
Sbjct: 112 GEKVLSPAQDALFRIHDRVVADDARSEDSPEGEKQVTAKLLVPSDQIGCILGRGGQIVQN 171
Query: 505 MRRRTQADIRVVGAR 519
+R T A IR+V R
Sbjct: 172 IRSETGAQIRIVKDR 186
>gi|308081899|ref|NP_001183640.1| uncharacterized protein LOC100502234 [Zea mays]
gi|238013618|gb|ACR37844.1| unknown [Zea mays]
gi|414867002|tpg|DAA45559.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867003|tpg|DAA45560.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
gi|414867004|tpg|DAA45561.1| TPA: hypothetical protein ZEAMMB73_773291 [Zea mays]
Length = 541
Score = 262 bits (669), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 167/405 (41%), Positives = 245/405 (60%), Gaps = 51/405 (12%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P DTVYR LC SRKIG +IG+ G I K LR ETQAKI + +++PG +ERV+ I+S+ K
Sbjct: 35 PDDTVYRYLCASRKIGSIIGRGGEIAKQLRTETQAKIRIGESVPGCDERVVTIFSTSRKT 94
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS-TITAR 243
+D+ C AQDAL +VH+R+ ++ G+ ++D E S +T R
Sbjct: 95 NTIDGAEDEV------------CPAQDALFRVHERLASDE---GLGNEDSEEISPQVTVR 139
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
LLVP++ +GC++GK G +IQ +RSETGA IRVL D +P CA++ DE++QISG V ++
Sbjct: 140 LLVPSDQIGCIIGKGGQIIQGIRSETGAQIRVLSNDHIPACAISGDELLQISGDTVVVRK 199
Query: 304 ALYEVSTLLHQNPRKDKP--PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHG 361
AL++VS+ LH NP K + SS Q Y G H G+S+ P +
Sbjct: 200 ALHQVSSRLHNNPSKSQHLLASSLTQPYPGST-----------HLGGSSTAPVVGIT--- 245
Query: 362 MPSTPWMGGY-----GDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
P P GGY GD PS P + + EFS+++LC+A +GGVIGKG
Sbjct: 246 -PVIPPYGGYKGDVAGDWPSLY--------QPRRDESSAKEFSLRLLCAAANVGGVIGKG 296
Query: 417 GFNVKQLQQETGASIHVEDAPTDSDER-VIRASAFEGLWNPRSQTIDAILQLQNKTSEFS 475
G +KQ++QE+GA I V + +D D+ +I SA E +P S TIDA ++LQ + SE S
Sbjct: 297 GGIIKQIRQESGALIKVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQPRCSEKS 356
Query: 476 E----KGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ + + TTRLLV +S++GC++G+GG +I E+RR ++A++R++
Sbjct: 357 DLESAEQSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANVRIL 401
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/165 (33%), Positives = 87/165 (52%), Gaps = 14/165 (8%)
Query: 183 KIAKTQNKDDDSAAET--KKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
K+A + + DD T KE E P DA +++ R E+ SD ++ +
Sbjct: 312 KVASSNSDPDDDCIITVSAKEFFEDPVSPTIDAAVRLQPRCSEK-------SDLESAEQS 364
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
T RLLV + +GCL+GK G +I +R + AN+R+L + +P A DEMVQI+G +
Sbjct: 365 YTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANVRILSKENVPKVAAEDDEMVQITGGLD 424
Query: 300 VAKRALYEVSTLLHQN-PRKDKPPSSFPQAYGGQNFHSPPAPMAD 343
VA+ AL +++T L N ++ S+FP +H PA ++D
Sbjct: 425 VARNALVQIATRLKANFFEREGSLSAFPPVI---PYHPLPAGVSD 466
>gi|148909250|gb|ABR17725.1| unknown [Picea sitchensis]
Length = 435
Score = 260 bits (665), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 181/409 (44%), Positives = 244/409 (59%), Gaps = 25/409 (6%)
Query: 112 SNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE 171
S + REQ+ + TVYRILCPS IG VIGK G ++KS+R+ET++KI VAD +PG +
Sbjct: 28 SGTGREQTMPGAD--STVYRILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVD 85
Query: 172 ERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMAS 231
ERVI+I+SSP K + EP C AQD LL+VH I++E G +
Sbjct: 86 ERVIVIFSSPLSKDKE------KDDDDDDNENEPVCPAQDGLLRVHSVIVQES--SGKDN 137
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
D D + ARLLV N+ +G L+GK G+ IQ+LRSE+GA I++ D LP CA + DE+
Sbjct: 138 DADKKRPQ-DARLLVANSQIGSLIGKGGNNIQKLRSESGAQIQIPRKDELPGCAFSFDEL 196
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA----PMADMHPL 347
V ISG K+ALY VS L ++P K++ P S Q+ P P A+ P
Sbjct: 197 VVISGDAAAVKKALYAVSAFLFKHPPKEQIPWSVILPETNQSSLPPSGVPTFPPANYLPQ 256
Query: 348 GNSSWPARNSS--LHGMPS-TPWMGGYGDQPSRMGSGSINSCPP------GQMGEVSAEF 398
G+S + N S + G S P +GGYG + S + P + S EF
Sbjct: 257 GDSLFGHHNLSAPILGYASRLPGLGGYGSEAGSAWPLSNPALPSFSKFGNSTTKKTSEEF 316
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRS 458
S+++LC KIGGVIGKGG +K ++ +TGASI VEDA T+SDERVI SA E + S
Sbjct: 317 SIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVIVVSATELADDRVS 376
Query: 459 QTIDAILQLQNKTSEFSEK-GTITTRLLVPSSKVGCILGQGGHVINEMR 506
TI+A+L LQ KTS ++K G I+TR LVPS +GC+LG+GG++I+EMR
Sbjct: 377 PTIEAVLLLQGKTSGTTDKDGAISTRFLVPSKHIGCLLGKGGNIISEMR 425
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 78/154 (50%), Gaps = 33/154 (21%)
Query: 120 FGNSQPADTV----YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVI 175
FGNS T R+LCP+ KIGGVIGK GN +KS+R +T A I V D S+ERVI
Sbjct: 304 FGNSTTKKTSEEFSIRVLCPNDKIGGVIGKGGNTIKSMRNDTGASIRVEDAQTESDERVI 363
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN 235
++ SA E + + P +A+L L G S +
Sbjct: 364 VV----------------SATELADDRVSPTI---EAVL----------LLQGKTSGTTD 394
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSET 269
++ I+ R LVP+ +GCLLGK G++I +R+ +
Sbjct: 395 KDGAISTRFLVPSKHIGCLLGKGGNIISEMRANS 428
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 68/136 (50%), Gaps = 21/136 (15%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI-------------RA 447
+ILC + IG VIGKGG +K ++QET + I V DA DERVI
Sbjct: 45 RILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVADAVPGVDERVIVIFSSPLSKDKEKDD 104
Query: 448 SAFEGLWNPRSQTIDAILQLQN--------KTSEFSEKGTITTRLLVPSSKVGCILGQGG 499
+ P D +L++ + K ++ +K RLLV +S++G ++G+GG
Sbjct: 105 DDDDNENEPVCPAQDGLLRVHSVIVQESSGKDNDADKKRPQDARLLVANSQIGSLIGKGG 164
Query: 500 HVINEMRRRTQADIRV 515
+ I ++R + A I++
Sbjct: 165 NNIQKLRSESGAQIQI 180
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 7/54 (12%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDI 536
R+L PS+ +G ++G+GG VI MR+ T++ IRV D PG E ++ I
Sbjct: 45 RILCPSNVIGSVIGKGGKVIKSMRQETRSKIRVA-------DAVPGVDERVIVI 91
>gi|357496471|ref|XP_003618524.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493539|gb|AES74742.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 553
Score = 260 bits (665), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 170/418 (40%), Positives = 251/418 (60%), Gaps = 55/418 (13%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEE 172
+ REQ N + DTV+R LCP RKIG +IG+ G IVK LR ET+AKI + +T+PG +E
Sbjct: 34 DRDREQFVINKE--DTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDE 91
Query: 173 RVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASD 232
RV+ +YSS D+ + + + + P A+DAL K+HDR++ EDL SD
Sbjct: 92 RVVTVYSS---------SDETNTVDDGDKLVSP---AEDALFKIHDRVVAEDLH----SD 135
Query: 233 DDNENS-TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
+ E + A+LLVP++ +GC+LGK G ++Q LRSETGA IR+L D +P CA+ +DE+
Sbjct: 136 QEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKDDHVPACALRSDEL 195
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDK--PPSSFPQAY-GGQNFHSPPA--PMADMHP 346
VQISG V K+AL+++++ LH NP + + S+ P Y G + P A P+ M P
Sbjct: 196 VQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPSVYPSGGSLMGPTAGPPIVGMAP 255
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGY----GDQPSRMGSGSINSCPPGQMGEVSAEFSMKI 402
L P+ GGY GD P R S+ S P ++ S EFS+++
Sbjct: 256 L----------------VGPY-GGYKSDTGDWPPR----SMYSAPRDEISS-SKEFSVRL 293
Query: 403 LCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTID 462
+C G +GGVIGKGG + Q++Q++GA+I V D+ D+ +I S E S T++
Sbjct: 294 VCPTGNLGGVIGKGGGIINQIRQDSGATIKV-DSSAKGDDCLITISTKEFFEETFSPTVE 352
Query: 463 AILQLQNKTSEFSEKG----TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
A + LQ + SE SE+ + TTRLLV SS++GC++G+GG +I EMRR T+++IR++
Sbjct: 353 AAVLLQPRCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRIL 410
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%)
Query: 231 SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE 290
S+ D+ + T RLLV ++ +GCL+GK G +I +R T +NIR+L + LP A + DE
Sbjct: 365 SERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDE 424
Query: 291 MVQISGKPNVAKRALYEVSTLLHQN 315
MVQISG +VAK AL +V T L N
Sbjct: 425 MVQISGDLDVAKDALVQVLTRLRAN 449
>gi|357496469|ref|XP_003618523.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355493538|gb|AES74741.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 569
Score = 260 bits (664), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 170/418 (40%), Positives = 251/418 (60%), Gaps = 55/418 (13%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEE 172
+ REQ N + DTV+R LCP RKIG +IG+ G IVK LR ET+AKI + +T+PG +E
Sbjct: 34 DRDREQFVINKE--DTVFRYLCPGRKIGSIIGRGGEIVKQLRVETKAKIRIGETVPGCDE 91
Query: 173 RVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASD 232
RV+ +YSS D+ + + + + P A+DAL K+HDR++ EDL SD
Sbjct: 92 RVVTVYSS---------SDETNTVDDGDKLVSP---AEDALFKIHDRVVAEDLH----SD 135
Query: 233 DDNENS-TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
+ E + A+LLVP++ +GC+LGK G ++Q LRSETGA IR+L D +P CA+ +DE+
Sbjct: 136 QEEEGGPQVNAKLLVPSDQIGCVLGKGGQIVQNLRSETGAQIRILKDDHVPACALRSDEL 195
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDK--PPSSFPQAY-GGQNFHSPPA--PMADMHP 346
VQISG V K+AL+++++ LH NP + + S+ P Y G + P A P+ M P
Sbjct: 196 VQISGDAAVVKKALHQIASRLHHNPSRTQHLLGSAVPSVYPSGGSLMGPTAGPPIVGMAP 255
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGY----GDQPSRMGSGSINSCPPGQMGEVSAEFSMKI 402
L P+ GGY GD P R S+ S P ++ S EFS+++
Sbjct: 256 L----------------VGPY-GGYKSDTGDWPPR----SMYSAPRDEISS-SKEFSVRL 293
Query: 403 LCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTID 462
+C G +GGVIGKGG + Q++Q++GA+I V D+ D+ +I S E S T++
Sbjct: 294 VCPTGNLGGVIGKGGGIINQIRQDSGATIKV-DSSAKGDDCLITISTKEFFEETFSPTVE 352
Query: 463 AILQLQNKTSEFSEKG----TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
A + LQ + SE SE+ + TTRLLV SS++GC++G+GG +I EMRR T+++IR++
Sbjct: 353 AAVLLQPRCSEKSERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRIL 410
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 55/85 (64%)
Query: 231 SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE 290
S+ D+ + T RLLV ++ +GCL+GK G +I +R T +NIR+L + LP A + DE
Sbjct: 365 SERDSGIISFTTRLLVSSSRIGCLIGKGGSIITEMRRLTKSNIRILSKENLPKIASDDDE 424
Query: 291 MVQISGKPNVAKRALYEVSTLLHQN 315
MVQISG +VAK AL +V T L N
Sbjct: 425 MVQISGDLDVAKDALVQVLTRLRAN 449
>gi|357501947|ref|XP_003621262.1| KH domain-containing protein [Medicago truncatula]
gi|355496277|gb|AES77480.1| KH domain-containing protein [Medicago truncatula]
Length = 571
Score = 258 bits (659), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 165/404 (40%), Positives = 239/404 (59%), Gaps = 47/404 (11%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
DTVYR LCP RKIG +IG+ G IVK LR +T+AKI + +T+PG +ERV+ +YS ++
Sbjct: 48 DTVYRYLCPVRKIGSIIGRGGEIVKQLRLDTKAKIRIGETVPGCDERVVTVYS----VSD 103
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN----STITA 242
N +DS E C A DAL+++H ++I EDL G D D E +TA
Sbjct: 104 ESNDFEDSG--------EFMCPAMDALVRIHQKVIAEDLRGVEDEDVDMEKVDGGDLVTA 155
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
+LLV ++ +GC++GK G ++Q +RSETGA IR+L DRLP CA+N+DE+VQISG+ V K
Sbjct: 156 KLLVASDQIGCVIGKGGQIVQNIRSETGAQIRILKDDRLPLCALNSDELVQISGEIAVVK 215
Query: 303 RALYEVSTLLHQNPRKDK--PPSSFPQAY---GGQNFHSPPAPMADMHPLGNSSWPARNS 357
+AL +V+ LH NP + + S+ P Y G AP+ M P+G +
Sbjct: 216 KALIQVAARLHDNPSRTQHLLTSAVPGVYAASGSMVGSHGGAPIMGMAPIGGGYGGYKGD 275
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSA-EFSMKILCSAGKIGGVIGKG 416
+ D P M PG E S EFS++ +C IGGVIGKG
Sbjct: 276 VV-------------DYPRSM--------YPGSRDEGSVKEFSVRFVCPTANIGGVIGKG 314
Query: 417 GFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSE 476
G + Q++Q++GA+I V+ + T+ D+ +I SA E +P S TI+A + LQ + SE E
Sbjct: 315 GGIINQIRQDSGANIKVDSSATEGDDCLIAISARELFEDPFSATIEAAVLLQPRCSEKVE 374
Query: 477 KG----TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ + T+RLLV SS++GC++G+GG +I EMRR T+A+IR++
Sbjct: 375 RDSGILSFTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRIL 418
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 52/77 (67%)
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+ T+RLLV ++ +GCL+GK G +I +R T ANIR+L + LP A DEMVQISG+
Sbjct: 381 SFTSRLLVSSSRIGCLIGKGGSIITEMRRLTKANIRILSKEDLPKIATEDDEMVQISGEL 440
Query: 299 NVAKRALYEVSTLLHQN 315
++AK AL +V T L N
Sbjct: 441 DIAKDALLQVLTRLRAN 457
>gi|357112139|ref|XP_003557867.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 542
Score = 258 bits (658), Expect = 9e-66, Method: Compositional matrix adjust.
Identities = 166/407 (40%), Positives = 248/407 (60%), Gaps = 57/407 (14%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P DTVYR LC SRKIG +IG+ G I K LR +TQAKI + +++PG +ERVI I+SS +
Sbjct: 37 PDDTVYRYLCTSRKIGSIIGRGGEIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRET 96
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN--STITA 242
++ +D C AQDAL +VH+++I +D G D++NE + +T
Sbjct: 97 NTIEDTEDKV------------CPAQDALFRVHEKLIADDGPG----DEENEEGLAQVTV 140
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
RLLVP++ +GC++GK G +IQ +RS+TG+ IRVL +RLP C ++ DE++QISG P V +
Sbjct: 141 RLLVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNERLPACGISGDELLQISGDPLVVR 200
Query: 303 RALYEVSTLLHQNPRKDK----PPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS 358
+AL +VS+ LH NP + + P P G +N S AP+ + P+
Sbjct: 201 KALLQVSSRLHDNPSRSQHLQAPSLMQPYPVGSRNGSSSTAPVVGIAPM----------- 249
Query: 359 LHGMPSTPWMGGY-----GDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVI 413
+P+ GGY GD PS P + + +FS+++LC+A +GGVI
Sbjct: 250 -----VSPY-GGYKGDMVGDWPSIY--------QPRREDSSAKDFSLRLLCAASDVGGVI 295
Query: 414 GKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSE 473
GKGG +KQ++QE+GA I V D+ + D+ +I SA E +P S TIDA ++LQ K SE
Sbjct: 296 GKGGGIIKQIRQESGAFIKV-DSSSAEDDCIITVSAKEFFEDPVSPTIDATVRLQPKCSE 354
Query: 474 FS--EKG--TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ E G + TTRLLV +S++GC++G+GG +I E+RR ++A+IR++
Sbjct: 355 KTDPESGEPSYTTRLLVSTSQIGCLIGKGGSIITEIRRTSRANIRIL 401
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 94/192 (48%), Gaps = 20/192 (10%)
Query: 183 KIAKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
K+ + +DD + KE E P DA +++ + E+ +D ++ + T
Sbjct: 314 KVDSSSAEDDCIITVSAKEFFEDPVSPTIDATVRLQPKCSEK-------TDPESGEPSYT 366
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
RLLV + +GCL+GK G +I +R + ANIR+L + +P A +EMVQISG VA
Sbjct: 367 TRLLVSTSQIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDEEMVQISGDLEVA 426
Query: 302 KRALYEVSTLLHQN-PRKDKPPSSFPQAYGGQNFHSPPAPMADM-HPLGNSSWPARNSSL 359
+ AL +++T L N ++ S F +H PA ++D LG + PA +
Sbjct: 427 RHALVQITTRLKANFFEREGALSGFQPVI---PYHPMPASISDEPKYLGRDTKPAGH--- 480
Query: 360 HGMPSTPWMGGY 371
P+ GGY
Sbjct: 481 ----DYPYSGGY 488
>gi|147853553|emb|CAN81693.1| hypothetical protein VITISV_009249 [Vitis vinifera]
Length = 543
Score = 256 bits (654), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 182/455 (40%), Positives = 268/455 (58%), Gaps = 62/455 (13%)
Query: 84 ASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVI 143
A +RN + KR ++Q G G K+ N + + G DTVYR LCP RKIG +I
Sbjct: 2 AGQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIGVE---DTVYRYLCPVRKIGSII 58
Query: 144 GKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESM 203
G+ G+I K LR ET++ I + +T+PG EERV+ IYSS ++ N D+ E +
Sbjct: 59 GRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSS----SEETNPFGDTG-----ELV 109
Query: 204 EPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
P AQDAL +VHDRI+ +L A ++ E +T R+LVP++ +GC++GK G VIQ
Sbjct: 110 SP---AQDALFRVHDRIVAGEL---PADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQ 163
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMV------------QISGKPNVAKRALYEVSTL 311
+RSET A IR+L + LPPCA+++DE++ QI G +V ++AL+++++
Sbjct: 164 NIRSETRAQIRILKDEHLPPCALSSDELLQAFGNVFWALTSQIIGDASVVRKALHQLASR 223
Query: 312 LHQNPRKDK--PPSSFPQAY-GGQNFHSP--PAPMADMHPLGNSSWPARNSSLHGMPSTP 366
LH+NP + + SS P Y G F +P AP+ + PL
Sbjct: 224 LHENPSRSQHLLLSSSPNMYQSGGTFMTPNIDAPLVGVAPL------------------- 264
Query: 367 WMGGYGDQPSRMGSGSINSCPPGQMGEVSA-EFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
MG YG G S +S + E SA EFS++++C G IGGVIGKGG +KQ++Q
Sbjct: 265 -MGSYGGYKGDTGDWS-HSYYSARRDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQ 322
Query: 426 ETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEK----GTIT 481
E+GASI V+ + + D+ +I SA E +P S TIDA L+LQ + SE +E+ +T
Sbjct: 323 ESGASIKVDSSSAEGDDCIIFISAKEFFEDP-SPTIDAALRLQPRCSEKAERESSDSVVT 381
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
TRLLVPSS++GC++G+GG +I+EMR T+A+IR++
Sbjct: 382 TRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRIL 416
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 126/250 (50%), Gaps = 37/250 (14%)
Query: 109 GNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
G+WS+S S + R++CP+ IGGVIGK G I+K +R+E+ A I V +
Sbjct: 276 GDWSHSYYSARRDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSA 335
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
++ +I I + KE E DA L++ R E+
Sbjct: 336 EGDDCIIFI--------------------SAKEFFEDPSPTIDAALRLQPRCSEK----- 370
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
++ ++ +S +T RLLVP++ +GCL+GK G +I +RS T ANIR+L + LP A
Sbjct: 371 --AERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASED 428
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNP-RKDKPPSSFPQAYGGQNFHSPPAPMADMHPL 347
DEMVQI+G+ NVA AL +V+ L N ++ ++ P P PM+DM
Sbjct: 429 DEMVQITGELNVASNALLQVTLRLKANLFEREGAIAAIPPTL-------PYLPMSDMSD- 480
Query: 348 GNSSWPARNS 357
S + +R+S
Sbjct: 481 -GSKYGSRDS 489
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 115/240 (47%), Gaps = 40/240 (16%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQT 460
+ LC KIG +IG+GG KQL+ ET ++I + + +ERV+ + NP T
Sbjct: 46 RYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDT 105
Query: 461 -------IDAILQLQNKT--------SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
DA+ ++ ++ E E +T R+LVPS ++GC++G+GG VI +
Sbjct: 106 GELVSPAQDALFRVHDRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNI 165
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS---GQSMKV 562
R T+A IR+ L+D H C + SS+ L+ A G +TS G + V
Sbjct: 166 RSETRAQIRI------LKDEH--LPPCAL----SSDELLQAFGNVFWALTSQIIGDASVV 213
Query: 563 QPSSYQ-----NINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSY 617
+ + +Q + NP +S +SS + YQ+ T +P ++A P + P SY
Sbjct: 214 RKALHQLASRLHENPSRSQHLLLSSSPNMYQSGGTFMTP--NIDA---PLVGVAPLMGSY 268
>gi|302814720|ref|XP_002989043.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
gi|300143144|gb|EFJ09837.1| hypothetical protein SELMODRAFT_10869 [Selaginella moellendorffii]
Length = 630
Score = 256 bits (653), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 166/411 (40%), Positives = 238/411 (57%), Gaps = 30/411 (7%)
Query: 129 VYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIII----------- 177
++RILCP+ +IG VIGK G+I+K+LR++T AKI +AD IPGS+ERVIII
Sbjct: 1 LFRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDE 60
Query: 178 -YSSPTKIAKTQNKD-DDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD- 234
Y + + D DD A + + C AQ AL KVH RI++ D + D D
Sbjct: 61 DYPAGSGGGAPAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDS 120
Query: 235 ---NENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
+ + + R+LVP N VGCLLGK+G +I+++R ETG+ IR+LP ++LP CA+ TDE+
Sbjct: 121 VEEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEV 180
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDKPPS-SFPQAYGGQNFHSPPAPMADMHPLGNS 350
VQ+ G KRAL +ST L NP KD+P S SF G S P ++ + ++
Sbjct: 181 VQVVGDRPSVKRALNAISTRLLDNPPKDRPSSASFQSGNFGGGSRSSGFPASEPYIPQHT 240
Query: 351 SWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQ-MGEVSAEFSMKILCSAGKI 409
S A + L P + G G Q R + ++ G+ + + E +ILC + KI
Sbjct: 241 SL-APQTRLRAEPRSD-SGDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKI 298
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK ++ LQ+ETGA I+V DA +ERVI SA E + S +A+ +Q+
Sbjct: 299 GNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDDLSPAQEAVFHIQD 355
Query: 470 KT----SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
K E SE+ + TRLLVPS+ VGC+LG+GG++I+EMR T+A IRV+
Sbjct: 356 KLRDDGGETSER--VVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVL 404
Score = 144 bits (362), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 115/367 (31%), Positives = 177/367 (48%), Gaps = 84/367 (22%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V+RILCPS KIG +IGK +++L+EET AKI V D +PG EERVII+
Sbjct: 286 ELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIV--------- 333
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST-ITARLL 245
SA E+ + + P AQ+A+ + D++ DD E S + RLL
Sbjct: 334 -------SAVESPDDDLSP---AQEAVFHIQDKL----------RDDGGETSERVVTRLL 373
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP+N VGCLLGK G++I +R+ T A IRVL ++LP CA++ DE+VQ+ G+ VA+ AL
Sbjct: 374 VPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPLCALDNDEVVQVLGEIRVARDAL 433
Query: 306 YEVSTLLHQNPRKDK--------------PPSSF----PQAYGGQNFHSPPAPMADMHPL 347
++++ L N ++K P S+F Q G Q SPP+ + +
Sbjct: 434 VQITSRLRANLYREKTDRSDDYGYQRSTSPLSNFGLQASQPPGIQAPRSPPSWLLQQVLI 493
Query: 348 GNSSWPARNSSLHGMPSTP---------------------WMG----GYGDQPSRMGSGS 382
S+ +R +S +P W+G G D P ++ S S
Sbjct: 494 PPPSFKSRLTSF--LPCLDRKRSLQWFATAYKLCWNREKLWLGRRSFGLADWPYQV-SHS 550
Query: 383 INSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDE 442
I + V + +L V+G+ G N+ Q+ + +GA + + D T + +
Sbjct: 551 IQ-----RHLSVVTSTKIDVLIPEVTFSAVLGQNGDNLTQISKMSGAKVTLADGCTATGD 605
Query: 443 RVIRASA 449
R+I S
Sbjct: 606 RLIEISG 612
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 7/54 (12%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDI 536
R+L P+S++G ++G+GG +I +R++T GA++K+ D PGS E ++ I
Sbjct: 3 RILCPASRIGSVIGKGGSIIKTLRQQT-------GAKIKIADAIPGSDERVIII 49
>gi|357112153|ref|XP_003557874.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 538
Score = 255 bits (652), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 166/407 (40%), Positives = 249/407 (61%), Gaps = 57/407 (14%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P DTVYR LC SRKIG +IG+ G I K LR +TQAKI + +++PG +ERVI I+SS +
Sbjct: 37 PDDTVYRYLCASRKIGSIIGRGGEIAKQLRTDTQAKIRIGESVPGCDERVITIFSSSRET 96
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN--STITA 242
++ +D C AQDAL +VH+++I +D G D++NE + +
Sbjct: 97 NTVEDTEDKV------------CPAQDALFRVHEKLITDDGPG----DEENEEGLAQVIV 140
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
RLLVP++ +GC++GK G +IQ +RS+TG++IRVL + LP CA++ DE++QISG P V +
Sbjct: 141 RLLVPSDQIGCIIGKGGHIIQGIRSDTGSHIRVLSTEHLPACAISGDELLQISGDPLVVR 200
Query: 303 RALYEVSTLLHQNPRKDKP--PSSFPQAY--GGQNFHSPPAPMADMHPLGNSSWPARNSS 358
+AL +VS+ LH NP + + SS Q Y G ++ S P+ + P+ N
Sbjct: 201 KALLQVSSRLHDNPSRSQHLLASSLTQPYPVGSRHGSSSTTPVVGIAPMVN--------- 251
Query: 359 LHGMPSTPWMGGY-----GDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVI 413
P+ GGY GD PS P + + EFS+++LC+A +GGVI
Sbjct: 252 -------PY-GGYKGDMVGDWPSIY--------QPRREESSAKEFSLRLLCAASDVGGVI 295
Query: 414 GKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSE 473
GKGG +KQ++QE+GA I V D+ + D+ +I SA E +P S TIDA ++LQ + SE
Sbjct: 296 GKGGGIIKQIRQESGAFIKV-DSSSAEDDCIITVSAKEFFEDPISPTIDATVRLQPRCSE 354
Query: 474 FS--EKG--TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ E G + TTRLLV +S++GC++G+GG +I E+RR ++A+IR++
Sbjct: 355 KTDPESGEPSYTTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRIL 401
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 95/191 (49%), Gaps = 19/191 (9%)
Query: 183 KIAKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
K+ + +DD + KE E P DA +++ R E+ +D ++ + T
Sbjct: 314 KVDSSSAEDDCIITVSAKEFFEDPISPTIDATVRLQPRCSEK-------TDPESGEPSYT 366
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
RLLV + +GCL+GK G +I +R + ANIR+L + +P A +EMVQISG +VA
Sbjct: 367 TRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVASEDEEMVQISGDLDVA 426
Query: 302 KRALYEVSTLLHQN-PRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
K AL +++T L N ++ S F +H PA +AD S + R++ L
Sbjct: 427 KHALVQITTRLKANFFEREGSLSGFQPVI---PYHPLPASVAD-----ESKYLGRDAKLG 478
Query: 361 GMPSTPWMGGY 371
P+ GGY
Sbjct: 479 --HDYPYSGGY 487
>gi|302803919|ref|XP_002983712.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
gi|300148549|gb|EFJ15208.1| hypothetical protein SELMODRAFT_445677 [Selaginella moellendorffii]
Length = 668
Score = 254 bits (650), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 164/410 (40%), Positives = 237/410 (57%), Gaps = 30/410 (7%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+RILCP+ +IG VIGK G+I+K+LR++T AKI +AD IPGS+ERVIII + + ++
Sbjct: 62 FRILCPASRIGSVIGKGGSIIKTLRQQTGAKIKIADAIPGSDERVIIIGAFDAEGGGDED 121
Query: 190 -------------KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD-- 234
DD A + + C AQ AL KVH RI++ D + D D
Sbjct: 122 YPAGSGGGSAAALDKDDRAMDEYTNGRDVACPAQLALFKVHSRILDADKYEDDLDDSDSV 181
Query: 235 --NENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
+ + + R+LVP N VGCLLGK+G +I+++R ETG+ IR+LP ++LP CA+ TDE+V
Sbjct: 182 EEDLSEKVVTRMLVPENQVGCLLGKKGRIIEQMREETGSQIRILPREQLPVCALPTDEVV 241
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKDKPPS-SFPQAYGGQNFHSPPAPMADMHPLGNSS 351
Q+ G KRAL +ST L NP KD+P S SF G S P ++ + ++S
Sbjct: 242 QVVGDRPSVKRALNAISTRLLDNPPKDRPSSASFQSGNFGGGSRSSGFPASEPYIPQHTS 301
Query: 352 WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQ-MGEVSAEFSMKILCSAGKIG 410
A + L P + G G Q R + ++ G+ + + E +ILC + KIG
Sbjct: 302 L-APQTRLRAEPRSDS-GDNGYQLLRPTAPGLSEFGTGRHLVPMDEELVFRILCPSEKIG 359
Query: 411 GVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNK 470
+IGK ++ LQ+ETGA I+V DA +ERVI SA E + S +A+ +Q+K
Sbjct: 360 NIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIVSAVESPDDDLSPAQEAVFHIQDK 416
Query: 471 T----SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
E SE+ + TRLLVPS+ VGC+LG+GG++I+EMR T+A IRV+
Sbjct: 417 LRDDGGETSER--VVTRLLVPSNHVGCLLGKGGNIISEMRNSTRAIIRVL 464
Score = 160 bits (404), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 117/357 (32%), Positives = 173/357 (48%), Gaps = 45/357 (12%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V+RILCPS KIG +IGK +++L+EET AKI V D +PG EERVII+
Sbjct: 346 ELVFRILCPSEKIGNIIGK---FIQTLQEETGAKINVPDAVPGCEERVIIV--------- 393
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST-ITARLL 245
SA E+ + + P AQ+A+ + D++ DD E S + RLL
Sbjct: 394 -------SAVESPDDDLSP---AQEAVFHIQDKL----------RDDGGETSERVVTRLL 433
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP+N VGCLLGK G++I +R+ T A IRVL ++LP CA++ DE+VQ+ G+ VA+ AL
Sbjct: 434 VPSNHVGCLLGKGGNIISEMRNSTRAIIRVLDREQLPLCALDNDEVVQVLGEIRVARDAL 493
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA--------PMADMHPLGNSSWPARNS 357
++++ L N ++K S YG Q SP + P P SW + +
Sbjct: 494 VQITSRLRANLYREKTDRS--DDYGYQRSTSPLSNFGLQASQPPGIQAPRSPPSWLLQQT 551
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKI--LCSAGKIGGVIGK 415
P + Y G S P + +S S KI L V+G+
Sbjct: 552 ERGAYNGLPRLTSYAGIERSYGLAGDRSALPTGLTNLSVVTSTKIDVLIPEVTFSAVLGQ 611
Query: 416 GGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTS 472
G N+ Q+ + +GA + + D T + +R+I S N ++A NK S
Sbjct: 612 NGDNLTQISKMSGAKVTLADGCTATGDRLIEISGTPDQTNIAKTVVEAFAASGNKRS 668
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 36/54 (66%), Gaps = 7/54 (12%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDI 536
R+L P+S++G ++G+GG +I +R++T GA++K+ D PGS E ++ I
Sbjct: 63 RILCPASRIGSVIGKGGSIIKTLRQQT-------GAKIKIADAIPGSDERVIII 109
>gi|296086352|emb|CBI31941.3| unnamed protein product [Vitis vinifera]
Length = 583
Score = 249 bits (636), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 173/444 (38%), Positives = 259/444 (58%), Gaps = 75/444 (16%)
Query: 81 IMDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIG 140
++ A +RN + KR ++Q G G K+ N + + G DTVYR LCP RKIG
Sbjct: 65 LLMAGQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIG---VEDTVYRYLCPVRKIG 121
Query: 141 GVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKK 200
+IG+ G+I K LR ET++ I + +T+PG EERV+ IYSS ++ N D+
Sbjct: 122 SIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSS----SEETNPFGDTG----- 172
Query: 201 ESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGD 260
E + P AQDAL +VHDRI+ +L A ++ E +T R+LVP++ +GC++GK G
Sbjct: 173 ELVSP---AQDALFRVHDRIVAGEL---PADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQ 226
Query: 261 VIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK 320
VIQ +RSET A IR+L + LPPCA+++DE++QI G +V ++AL+++++ LH+NP + +
Sbjct: 227 VIQNIRSETRAQIRILKDEHLPPCALSSDELLQIIGDASVVRKALHQLASRLHENPSRSQ 286
Query: 321 P--PSSFPQAY--GGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPS 376
SS P Y GG H S + AR D+ S
Sbjct: 287 HLLLSSSPNMYQSGGDWSH--------------SYYSARR----------------DESS 316
Query: 377 RMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 436
+ EFS++++C G IGGVIGKGG +KQ++QE+GASI V+ +
Sbjct: 317 ------------------AKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSS 358
Query: 437 PTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEK----GTITTRLLVPSSKVG 492
+ D+ +I SA E +P S TIDA L+LQ + SE +E+ +TTRLLVPSS++G
Sbjct: 359 SAEGDDCIIFISAKEFFEDP-SPTIDAALRLQPRCSEKAERESSDSVVTTRLLVPSSRIG 417
Query: 493 CILGQGGHVINEMRRRTQADIRVV 516
C++G+GG +I+EMR T+A+IR++
Sbjct: 418 CLIGKGGAIISEMRSVTRANIRIL 441
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 126/250 (50%), Gaps = 37/250 (14%)
Query: 109 GNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
G+WS+S S + R++CP+ IGGVIGK G I+K +R+E+ A I V +
Sbjct: 301 GDWSHSYYSARRDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSA 360
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
++ +I I + KE E DA L++ R E+
Sbjct: 361 EGDDCIIFI--------------------SAKEFFEDPSPTIDAALRLQPRCSEK----- 395
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
++ ++ +S +T RLLVP++ +GCL+GK G +I +RS T ANIR+L + LP A
Sbjct: 396 --AERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASED 453
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNP-RKDKPPSSFPQAYGGQNFHSPPAPMADMHPL 347
DEMVQI+G+ NVA AL +V+ L N ++ ++ P P PM+DM
Sbjct: 454 DEMVQITGELNVASNALLQVTLRLKANLFEREGAIAAIPPTL-------PYLPMSDMS-- 504
Query: 348 GNSSWPARNS 357
S + +R+S
Sbjct: 505 DGSKYGSRDS 514
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 21/141 (14%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQT 460
+ LC KIG +IG+GG KQL+ ET ++I + + +ERV+ + NP T
Sbjct: 112 RYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDT 171
Query: 461 -------IDAILQLQNKT--------SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
DA+ ++ ++ E E +T R+LVPS ++GC++G+GG VI +
Sbjct: 172 GELVSPAQDALFRVHDRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNI 231
Query: 506 RRRTQADIRVVGARVKLQDPH 526
R T+A IR+ L+D H
Sbjct: 232 RSETRAQIRI------LKDEH 246
>gi|125544080|gb|EAY90219.1| hypothetical protein OsI_11787 [Oryza sativa Indica Group]
Length = 542
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 153/396 (38%), Positives = 241/396 (60%), Gaps = 35/396 (8%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P DTVYR LCPSRKIG +IG+ G I K +R +TQAKI + +++ G +ERVI I+SS +
Sbjct: 37 PDDTVYRYLCPSRKIGSIIGRGGEIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRET 96
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
+ +D C AQDAL +VH+++ +D G SD+ + +T RL
Sbjct: 97 NTLVDAEDKV------------CPAQDALFRVHEKLSIDDDIGNEESDEGL--AQVTVRL 142
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP++ +GC++GK G +IQ +RS+TGA+IRVL + LP CA++ DE++QISG V ++A
Sbjct: 143 LVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISGDSTVVRKA 202
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPS 364
L +VS+ LH NP + + H + M +P+G+ + + + G+
Sbjct: 203 LLQVSSRLHDNPSRSQ--------------HLLASSMTQPYPVGSHLGSSSTAPVVGI-- 246
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQ 424
TP + YG + + P + + EFS+++LC+A +GGVIGKGG +KQ++
Sbjct: 247 TPLISSYGGYKGDVAGDWPSIYQPRREESSAKEFSLRLLCAASNVGGVIGKGGGIIKQIR 306
Query: 425 QETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TI 480
QE+GA I V+ + T+ D+ +I SA E +P S TI+A + LQ + SE ++ +
Sbjct: 307 QESGAFIKVDSSNTE-DDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEKTDPESAIPSY 365
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
TTRLLV +S++GC++G+GG +I E+RR ++A+IR++
Sbjct: 366 TTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRIL 401
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 183 KIAKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
K+ + +DD + KE E P +A + + R E+ +D ++ + T
Sbjct: 314 KVDSSNTEDDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEK-------TDPESAIPSYT 366
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
RLLV + +GCL+GK G +I +R + ANIR+L + +P A +EMVQISG +V
Sbjct: 367 TRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVV 426
Query: 302 KRALYEVSTLLHQN 315
+ AL +++T L N
Sbjct: 427 RHALLQITTRLKAN 440
>gi|115453243|ref|NP_001050222.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|18921324|gb|AAL82529.1|AC084766_15 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|108708431|gb|ABF96226.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|108708432|gb|ABF96227.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|113548693|dbj|BAF12136.1| Os03g0376800 [Oryza sativa Japonica Group]
gi|125586438|gb|EAZ27102.1| hypothetical protein OsJ_11034 [Oryza sativa Japonica Group]
gi|215686826|dbj|BAG89676.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215695345|dbj|BAG90536.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215704897|dbj|BAG94925.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 542
Score = 249 bits (635), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 153/396 (38%), Positives = 241/396 (60%), Gaps = 35/396 (8%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P DTVYR LCPSRKIG +IG+ G I K +R +TQAKI + +++ G +ERVI I+SS +
Sbjct: 37 PDDTVYRYLCPSRKIGSIIGRGGEIAKQMRADTQAKIRIGESVSGCDERVITIFSSSRET 96
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
+ +D C AQDAL +VH+++ +D G SD+ + +T RL
Sbjct: 97 NTLVDAEDKV------------CPAQDALFRVHEKLSIDDDIGNEESDEGL--AQVTVRL 142
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP++ +GC++GK G +IQ +RS+TGA+IRVL + LP CA++ DE++QISG V ++A
Sbjct: 143 LVPSDQIGCIIGKGGHIIQGIRSDTGAHIRVLSNENLPACAISGDELLQISGDSTVVRKA 202
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPS 364
L +VS+ LH NP + + H + M +P+G+ + + + G+
Sbjct: 203 LLQVSSRLHDNPSRSQ--------------HLLASSMTQPYPVGSHLGSSSTAPVVGI-- 246
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQ 424
TP + YG + + P + + EFS+++LC+A +GGVIGKGG +KQ++
Sbjct: 247 TPLISSYGGYKGDVAGDWPSIYQPRREESSAKEFSLRLLCAASNVGGVIGKGGGIIKQIR 306
Query: 425 QETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TI 480
QE+GA I V+ + T+ D+ +I SA E +P S TI+A + LQ + SE ++ +
Sbjct: 307 QESGAFIKVDSSNTE-DDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEKTDPESAIPSY 365
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
TTRLLV +S++GC++G+GG +I E+RR ++A+IR++
Sbjct: 366 TTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRIL 401
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 183 KIAKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
K+ + +DD + KE E P +A + + R E+ +D ++ + T
Sbjct: 314 KVDSSNTEDDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEK-------TDPESAIPSYT 366
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
RLLV + +GCL+GK G +I +R + ANIR+L + +P A +EMVQISG +V
Sbjct: 367 TRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVV 426
Query: 302 KRALYEVSTLLHQN 315
+ AL +++T L N
Sbjct: 427 RHALLQITTRLKAN 440
>gi|359473301|ref|XP_002272287.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 517
Score = 248 bits (633), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 173/441 (39%), Positives = 257/441 (58%), Gaps = 75/441 (17%)
Query: 84 ASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVI 143
A +RN + KR ++Q G G K+ N + + G DTVYR LCP RKIG +I
Sbjct: 2 AGQRNDYGKRSHSQSDYGGNGGSKRRNPGDDKEQHGIG---VEDTVYRYLCPVRKIGSII 58
Query: 144 GKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESM 203
G+ G+I K LR ET++ I + +T+PG EERV+ IYSS ++ N D+ E +
Sbjct: 59 GRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSS----SEETNPFGDTG-----ELV 109
Query: 204 EPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
P AQDAL +VHDRI+ +L A ++ E +T R+LVP++ +GC++GK G VIQ
Sbjct: 110 SP---AQDALFRVHDRIVAGEL---PADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQ 163
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKP-- 321
+RSET A IR+L + LPPCA+++DE++QI G +V ++AL+++++ LH+NP + +
Sbjct: 164 NIRSETRAQIRILKDEHLPPCALSSDELLQIIGDASVVRKALHQLASRLHENPSRSQHLL 223
Query: 322 PSSFPQAY--GGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMG 379
SS P Y GG H S + AR D+ S
Sbjct: 224 LSSSPNMYQSGGDWSH--------------SYYSARR----------------DESS--- 250
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
+ EFS++++C G IGGVIGKGG +KQ++QE+GASI V+ + +
Sbjct: 251 ---------------AKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSAE 295
Query: 440 SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEK----GTITTRLLVPSSKVGCIL 495
D+ +I SA E +P S TIDA L+LQ + SE +E+ +TTRLLVPSS++GC++
Sbjct: 296 GDDCIIFISAKEFFEDP-SPTIDAALRLQPRCSEKAERESSDSVVTTRLLVPSSRIGCLI 354
Query: 496 GQGGHVINEMRRRTQADIRVV 516
G+GG +I+EMR T+A+IR++
Sbjct: 355 GKGGAIISEMRSVTRANIRIL 375
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 126/250 (50%), Gaps = 37/250 (14%)
Query: 109 GNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
G+WS+S S + R++CP+ IGGVIGK G I+K +R+E+ A I V +
Sbjct: 235 GDWSHSYYSARRDESSAKEFSLRLVCPTGNIGGVIGKGGGIIKQIRQESGASIKVDSSSA 294
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
++ +I I + KE E DA L++ R E+
Sbjct: 295 EGDDCIIFI--------------------SAKEFFEDPSPTIDAALRLQPRCSEK----- 329
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
++ ++ +S +T RLLVP++ +GCL+GK G +I +RS T ANIR+L + LP A
Sbjct: 330 --AERESSDSVVTTRLLVPSSRIGCLIGKGGAIISEMRSVTRANIRILSKENLPKVASED 387
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNP-RKDKPPSSFPQAYGGQNFHSPPAPMADMHPL 347
DEMVQI+G+ NVA AL +V+ L N ++ ++ P P PM+DM
Sbjct: 388 DEMVQITGELNVASNALLQVTLRLKANLFEREGAIAAIPPTL-------PYLPMSDMSD- 439
Query: 348 GNSSWPARNS 357
S + +R+S
Sbjct: 440 -GSKYGSRDS 448
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/141 (32%), Positives = 73/141 (51%), Gaps = 21/141 (14%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQT 460
+ LC KIG +IG+GG KQL+ ET ++I + + +ERV+ + NP T
Sbjct: 46 RYLCPVRKIGSIIGRGGDIAKQLRSETKSNIRIGETMPGCEERVVTIYSSSEETNPFGDT 105
Query: 461 -------IDAILQLQNKT--------SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
DA+ ++ ++ E E +T R+LVPS ++GC++G+GG VI +
Sbjct: 106 GELVSPAQDALFRVHDRIVAGELPADEEPEEAQQVTVRMLVPSDQIGCVIGKGGQVIQNI 165
Query: 506 RRRTQADIRVVGARVKLQDPH 526
R T+A IR+ L+D H
Sbjct: 166 RSETRAQIRI------LKDEH 180
>gi|225443339|ref|XP_002264125.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
gi|297735779|emb|CBI18466.3| unnamed protein product [Vitis vinifera]
Length = 704
Score = 247 bits (630), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 165/452 (36%), Positives = 236/452 (52%), Gaps = 47/452 (10%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
G ++P ++RILCP+ K GGVIGK G I++ RE+T AKI + D++ G +ERVI+I +
Sbjct: 50 GAAKP-QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVAD 108
Query: 181 PTK-------IAKTQNKDDDSAAETKKESMEPHCA-------AQDALLKVHDRIIEEDLF 226
K I + D + +A S P AQ AL++V +RI++ D
Sbjct: 109 AVKSKREASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEE 168
Query: 227 GGMASDD-DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCA 285
D N + RLL P+N VGC+LG+ G +++++R E+GA IRVLP D +P CA
Sbjct: 169 REEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACA 228
Query: 286 MNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMH 345
DE++QI+G ++AL VS+ L NPR D S+ + GG H +
Sbjct: 229 SPGDELIQITGTFPAVRKALLLVSSCLQDNPRADATNSAAAKPTGGM-LH------GNGM 281
Query: 346 PLGNSSWPAR--NSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKIL 403
P S+P R SSLHG GY P G+ + + E K+L
Sbjct: 282 PGQLDSFPQRGYGSSLHG--PDYHSRGYSSMPGPENIGANHRM------VLEEEVVFKLL 333
Query: 404 CSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDA 463
C K+G +IGKGG ++ LQ ETGASI + DA DSDERV+ SA E L S DA
Sbjct: 334 CHFEKVGSLIGKGGSIIRFLQSETGASIKIADAAPDSDERVVVISARENLEQKHSPAQDA 393
Query: 464 ILQLQNKTSE--FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVK 521
++++ + +E F + RLLV S ++GC+LG+GG +I+EMRR T A IR+ K
Sbjct: 394 VIRVHCRIAEIGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMRRATGASIRIF---AK 450
Query: 522 LQDPHPGSSECIVDIRGSSEHLISAHGTYQSF 553
Q P GS ++ L+ G+ QS
Sbjct: 451 EQVPKCGS---------QNDELVQVIGSLQSV 473
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 115/384 (29%), Positives = 183/384 (47%), Gaps = 90/384 (23%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V+++LC K+G +IGK G+I++ L+ ET A I +AD P S+ERV++I
Sbjct: 327 EVVFKLLCHFEKVGSLIGKGGSIIRFLQSETGASIKIADAAPDSDERVVVI--------- 377
Query: 187 TQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
+ +E++E H AQDA+++VH RI E G A + ARLL
Sbjct: 378 -----------SARENLEQKHSPAQDAVIRVHCRIAEIGFEPGAA---------VVARLL 417
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
V + +GCLLGK G +I +R TGA+IR+ +++P C DE+VQ+ G + AL
Sbjct: 418 VHSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDAL 477
Query: 306 YEVSTLLHQN--PRK------DKPP--SSFPQAYGG--QNFHSPPAPMADMHPLG----- 348
+ +++ + + P K + PP SSFP+ + H P +P P+G
Sbjct: 478 FRITSRIRETIFPLKPSISNVNGPPYMSSFPEIPPPMFRPRHDPASPGHYSSPVGVPHGI 537
Query: 349 -NSSWPA-----RNSSLHGM----PST------PWMG---GYG---DQPS---RM----- 378
S+ P ++S HG+ PS P+ G G+G D+PS RM
Sbjct: 538 DRSAVPGHPLDHQSSFSHGVDRIGPSNLDRAPYPYGGDRPGHGPPFDRPSSSPRMWTQGV 597
Query: 379 ---------GSGSINS--CPPGQMGEVS--AEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
GSGS+ S PPG + ++++ + V G+ N+ Q++Q
Sbjct: 598 SGNLRGTDVGSGSLASRNGPPGSGSQAPNITTTTVEVAVPQALLSHVYGENNSNLNQIRQ 657
Query: 426 ETGASIHVEDAPTDSDERVIRASA 449
+GA + ++D T S E V+ S
Sbjct: 658 ISGARVVIQDPRTGSSEGVVVVSG 681
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 43/80 (53%), Gaps = 7/80 (8%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T T + VP + + + G+ +N++R+ + GARV +QDP GSSE +V + G
Sbjct: 629 TTTVEVAVPQALLSHVYGENNSNLNQIRQ-------ISGARVVIQDPRTGSSEGVVVVSG 681
Query: 539 SSEHLISAHGTYQSFMTSGQ 558
+ + +A Q+F+ S Q
Sbjct: 682 TPDQTRAAQSLVQAFILSEQ 701
>gi|242078463|ref|XP_002444000.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
gi|241940350|gb|EES13495.1| hypothetical protein SORBIDRAFT_07g005630 [Sorghum bicolor]
Length = 629
Score = 243 bits (620), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 154/440 (35%), Positives = 246/440 (55%), Gaps = 47/440 (10%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
+YRILCP IG VIGK GN++ ++R++T AK+ V D PG+++RVI++Y
Sbjct: 41 VLYRILCPDSLIGSVIGKNGNVINAIRQQTSAKVKVVDPYPGADKRVILVY------CYV 94
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
+++D D+ + EP CAAQDALL+VH+ I+ D D D +N T A +LVP
Sbjct: 95 KHRDLDAEVDDN----EPVCAAQDALLRVHNAIV--DTLHRNRRDSDKKN-TEEANILVP 147
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLP---ADRLPPCAMNTDEMVQISGKPNVAKRA 304
+ ++GK G VI+ LRS + A I+V P +D CAM+ D VQI+G K+A
Sbjct: 148 ASQASNVIGKSGAVIKHLRSTSRAFIKVSPKDPSDATHSCAMSFDNFVQITGGAEAVKKA 207
Query: 305 LYEVSTLLHQNPRKDKPP--SSFPQ------------AYGGQNFHSPP-APMADMHPLGN 349
L+ VST+++++P K+ P +S P+ Y NF+S P A + +HP
Sbjct: 208 LFGVSTIIYKHPSKENIPLETSIPEPTPSIIIPSELPVYPASNFYSAPDAAIPSVHP--- 264
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRM--GSGSINSCPPGQMGEVSAEFSMKILCSAG 407
S S+ H P + D R+ + P + S E ++LC +G
Sbjct: 265 -SLSILGSTHH----VPELALPADDHGRLPIYPSILPVIPTYSAPKCSGELEFRVLCPSG 319
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
KIG VIG+GG +K ++QE+GA I V+DA D +E +I ++ E + + +S ++A+L L
Sbjct: 320 KIGLVIGRGGATIKNIRQESGARIDVDDAKNDREESIITITSTEAIDDVKSAAVEAVLLL 379
Query: 468 QNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDP-H 526
Q K +++ E + RLLVP+ +GC++G+GG ++N+MR++T+A+I + K P
Sbjct: 380 QAKINDY-EDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILI----SKGDKPRR 434
Query: 527 PGSSECIVDIRGSSEHLISA 546
SS+ +V++ G ++ L A
Sbjct: 435 ASSSDELVEVSGEADKLRDA 454
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/317 (28%), Positives = 145/317 (45%), Gaps = 47/317 (14%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+LCPS KIG VIG+ G +K++R+E+ A+I V D EE +I I S T+
Sbjct: 312 FRVLCPSGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDREESIITITS-------TEA 364
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
DD +A A +A+L + +I +D E+ + RLLVPN
Sbjct: 365 IDDVKSA------------AVEAVLLLQAKI------------NDYEDDRMNLRLLVPNK 400
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
++GCL+G+ G ++ +R +T ANI + D+ P A ++DE+V++SG+ + + AL ++
Sbjct: 401 VIGCLIGRGGSIVNDMRKKTKANILISKGDK-PRRASSSDELVEVSGEADKLRDALVQII 459
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFH----------SPPAPMADMHPLGNSSWPARNSSL 359
L ++ K+ S G S PA + + S+ R S
Sbjct: 460 LRLREDVLKESVESQNSDRDGKLTVATSDSLYGSSLSLPALLPHNPQIAPLSYDRRGESE 519
Query: 360 HGMPSTPWMGGYG---DQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
+ P YG Q + G G + S E M I S + V+GK
Sbjct: 520 RALEVFPRTSSYGYSSMQVTDDGYGGLPSYTSKAYEEHLPRDEMTIPASG--LSKVMGKR 577
Query: 417 GFNVKQLQQETGASIHV 433
G N+ +++ +GA I +
Sbjct: 578 GTNLDNIRKISGAHIEI 594
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 7/57 (12%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIV 534
G + R+L P S +G ++G+ G+VIN +R++T A ++VV DP+PG+ + ++
Sbjct: 39 GLVLYRILCPDSLIGSVIGKNGNVINAIRQQTSAKVKVV-------DPYPGADKRVI 88
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 31/47 (65%)
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVL 276
A + N + + R+L P++++G ++GK G+VI +R +T A ++V+
Sbjct: 31 AQESSNNDGLVLYRILCPDSLIGSVIGKNGNVINAIRQQTSAKVKVV 77
>gi|326512112|dbj|BAJ96037.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 541
Score = 243 bits (619), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 152/396 (38%), Positives = 238/396 (60%), Gaps = 35/396 (8%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P DTVYR LC SRKIG +IG+ G I K LR +TQAKI + +++P +ERVI I+SS +
Sbjct: 37 PDDTVYRYLCTSRKIGSIIGRGGEIAKQLRSDTQAKIRIGESVPACDERVITIFSSSRET 96
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
++ +D C AQDAL +VH+++ +D G + +++ +T RL
Sbjct: 97 NTIEDTEDKV------------CPAQDALFRVHEKLATDD--GPVNKENEESLGQVTVRL 142
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP++ +GC++GK G +IQ +RS+TG+ IRVL + LP CA + DE++ I+G P V ++A
Sbjct: 143 LVPSDQIGCIIGKGGHIIQGIRSDTGSQIRVLSNEHLPLCATSGDELLLITGDPMVVRKA 202
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPS 364
L +VS+ LH NP + + H + + P+G+ + + + G+
Sbjct: 203 LLQVSSRLHGNPSRSQ--------------HLLASSLNQPFPVGSRLGSSSTAPVVGI-- 246
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQ 424
TP + YG M + P + EFS+++LC+A +GGVIGKGG +KQ++
Sbjct: 247 TPMVSPYGRYKGDMVGDWPSIYQPRREVSSPKEFSLRLLCAAANVGGVIGKGGGIIKQIR 306
Query: 425 QETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF--SEKG--TI 480
QE+GA I V D+ + D+ +I SA E +P S TIDA ++LQ + SE +E G +
Sbjct: 307 QESGAFIKV-DSSSAEDDCIITVSAKEFFEDPVSPTIDATVRLQPRCSEKIDAESGEPSY 365
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
TTRLLV +S++GC++G+GG +I E+RR ++A+IR++
Sbjct: 366 TTRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRII 401
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 12/163 (7%)
Query: 183 KIAKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
K+ + +DD + KE E P DA +++ R E+ D ++ + T
Sbjct: 314 KVDSSSAEDDCIITVSAKEFFEDPVSPTIDATVRLQPRCSEK-------IDAESGEPSYT 366
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
RLLV + +GCL+GK G +I +R + ANIR++ +P A + +EMV ISG + A
Sbjct: 367 TRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRIISKQDVPKVASDDEEMVLISGDLDFA 426
Query: 302 KRALYEVSTLLHQN-PRKDKPPSSFPQAYGGQNFHSPPAPMAD 343
+ AL +++T L N ++ S FP +H PA ++D
Sbjct: 427 RHALLQITTRLKANFFEREGALSGFPPVI---PYHPLPASVSD 466
>gi|413917022|gb|AFW56954.1| hypothetical protein ZEAMMB73_179405 [Zea mays]
Length = 632
Score = 241 bits (615), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 154/440 (35%), Positives = 241/440 (54%), Gaps = 44/440 (10%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
+YRILCP IG VIGK GN++ ++R +T AK+ V D PG+++RVI++Y
Sbjct: 41 VLYRILCPDSLIGSVIGKHGNVINAIRHQTSAKVKVVDPYPGADKRVILVY------CYV 94
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
+++D D+ + EP CAAQDALL+VH+ I++ D ++ ST A +LVP
Sbjct: 95 KHRDLDAEGDDN----EPVCAAQDALLRVHNAIVDALQTLHKNHKDSDKKSTEEANILVP 150
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---CAMNTDEMVQISGKPNVAKRA 304
+ ++GK G VI+ LRS + A I+V P D P CAM+ D VQI+G K+A
Sbjct: 151 ASQASNVIGKSGAVIKHLRSTSRAFIKVSPKDPSDPTHSCAMSFDNFVQITGGAEAVKKA 210
Query: 305 LYEVSTLLHQNPRKDKPP--SSFPQ------------AYGGQNFHSPP-APMADMHPLGN 349
L+ VST+++++P K+ P +S P Y NF+S P A + +HP
Sbjct: 211 LFGVSTIIYKHPSKENIPLETSIPDPTPSIIIPSELPVYPASNFYSAPDAAIPSVHP--- 267
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRM--GSGSINSCPPGQMGEVSAEFSMKILCSAG 407
S S+ H P + D R+ + P + S E ++LC G
Sbjct: 268 -SMSVLGSTRH----VPELAVPADDHGRLPIYQSILPVIPTYSAPKCSGELEFRVLCPGG 322
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
KIG VIG+GG +K ++QE+GA I V+DA D +E +I + E + +S ++A+L L
Sbjct: 323 KIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITIISTESTDDVKSAAVEAVLLL 382
Query: 468 QNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDP-H 526
Q K ++ SE + RLLVP+ +GC++G+GG ++N+MR++T+A+I + K P
Sbjct: 383 QAKIND-SEDDRMNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILI----SKGDKPRR 437
Query: 527 PGSSECIVDIRGSSEHLISA 546
SS+ +V++ G ++ L A
Sbjct: 438 ASSSDELVEVSGEADKLRDA 457
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 90/317 (28%), Positives = 144/317 (45%), Gaps = 47/317 (14%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+LCP KIG VIG+ G +K++R+E+ A+I V D EE +I I S T++
Sbjct: 315 FRVLCPGGKIGLVIGRGGATIKNIRQESGARIDVDDAKNDKEESIITIIS-------TES 367
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
DD +A A +A+L + +I +D+E+ + RLLVPN
Sbjct: 368 TDDVKSA------------AVEAVLLLQAKI------------NDSEDDRMNLRLLVPNK 403
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
++GCL+G+ G ++ +R +T ANI + D+ P A ++DE+V++SG+ + + AL ++
Sbjct: 404 VIGCLIGRGGSIVNDMRKKTKANILISKGDK-PRRASSSDELVEVSGEADKLRDALVQII 462
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNF--------HSPPAPMADMH-----PLGNSSWPARN 356
L + K+ S G S P P H PLG
Sbjct: 463 LRLREAVLKESVESQNSDRDGQLTVAASDSLYGSSLPLPALLPHNQQIAPLGYDRRGEPE 522
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
+L P T G Q + G G + S E M + S I V+GK
Sbjct: 523 RALEVFPRTSSYGYSSMQVTDDGYGGLPSYASKAYEEHVPRLEMTVPASG--ISKVMGKH 580
Query: 417 GFNVKQLQQETGASIHV 433
G N+ +++ +GA I +
Sbjct: 581 GTNLDNIRKISGAHIEI 597
Score = 45.8 bits (107), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 36/57 (63%), Gaps = 7/57 (12%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIV 534
G + R+L P S +G ++G+ G+VIN +R +T A ++VV DP+PG+ + ++
Sbjct: 39 GLVLYRILCPDSLIGSVIGKHGNVINAIRHQTSAKVKVV-------DPYPGADKRVI 88
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 31/47 (65%)
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVL 276
A + N + + R+L P++++G ++GK G+VI +R +T A ++V+
Sbjct: 31 AQESSNNDGLVLYRILCPDSLIGSVIGKHGNVINAIRHQTSAKVKVV 77
>gi|297814608|ref|XP_002875187.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297321025|gb|EFH51446.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 469
Score = 239 bits (611), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 151/398 (37%), Positives = 222/398 (55%), Gaps = 58/398 (14%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
DTVYR LCP RK G +IG+ G I K +R ET+A + + + +PG +ERV+ IYS+ + +
Sbjct: 17 DTVYRYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDERVVTIYSNSEETNR 76
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS---TITAR 243
++ +D C A DAL KVHD I+ E+ D+ +E S T+T R
Sbjct: 77 IEDDEDFV------------CPAFDALFKVHDMIVAEEFDNDGDYDNGDEYSERQTVTVR 124
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPC--AMNTDEMVQISGKPNVA 301
+LVP++ +GCL+GK G VIQ+LR++T A IRV+ D LP C A++ DE++QI G P+
Sbjct: 125 MLVPSDQIGCLIGKGGQVIQKLRNDTNAQIRVI-NDNLPICALALSHDELLQIIGDPSAV 183
Query: 302 KRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHG 361
+ ALY+V+ LL+ N PS F QN+ + P G PA SS H
Sbjct: 184 REALYQVAFLLYDN------PSRF------QNYFLSSSSTLQHQPGGILMSPAITSS-HK 230
Query: 362 MPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVK 421
S P +R+ FS+ +C A +GGVIGKGG +
Sbjct: 231 NYSAPRDAA----DARV-------------------FSICFICPAENVGGVIGKGGCFIN 267
Query: 422 QLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF----SEK 477
Q +QE+GA+I V TD D+ I + + + +S T++A L+LQ + SE S
Sbjct: 268 QTRQESGATIKVHTPETDEDDDCIIFISAKEFFEDQSPTVNAALRLQTRCSEKVGKDSSD 327
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
I+TR+L+PSS+VGC++G+GG +I+EMR T+A+IR+
Sbjct: 328 SAISTRVLIPSSQVGCLIGKGGALISEMRSVTKANIRI 365
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 108/232 (46%), Gaps = 37/232 (15%)
Query: 133 LCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDD 192
+CP+ +GGVIGK G + R+E+ A I V ++ II S+
Sbjct: 249 ICPAENVGGVIGKGGCFINQTRQESGATIKVHTPETDEDDDCIIFISA------------ 296
Query: 193 DSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVG 252
KE E +A L++ R E+ D+ +S I+ R+L+P++ VG
Sbjct: 297 -------KEFFEDQSPTVNAALRLQTRCSEK-------VGKDSSDSAISTRVLIPSSQVG 342
Query: 253 CLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
CL+GK G +I +RS T ANIR+ + +P A +EMVQI+G + A +AL +V L
Sbjct: 343 CLIGKGGALISEMRSVTKANIRIFQGEDVPRIARENEEMVQITGSLDAAIKALTQVMLRL 402
Query: 313 HQNP-RKDK----PPSSFPQAYGGQNFHSPPAPM---ADMHPLGNSSWPARN 356
N D+ P+ FP Y Q + P + HP G S ARN
Sbjct: 403 RANVFDMDRGLVLLPTFFP--YISQTIETSSKPRHRKGENHPHG-SEEIARN 451
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 72/140 (51%), Gaps = 27/140 (19%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI----------RASAF 450
+ LC K G +IG+GG KQ++ ET A++ + +A DERV+ R
Sbjct: 21 RYLCPVRKAGSIIGRGGEIAKQIRSETKANMRINEALPGCDERVVTIYSNSEETNRIEDD 80
Query: 451 EGLWNPRSQTIDAILQLQN--------------KTSEFSEKGTITTRLLVPSSKVGCILG 496
E P DA+ ++ + E+SE+ T+T R+LVPS ++GC++G
Sbjct: 81 EDFVCP---AFDALFKVHDMIVAEEFDNDGDYDNGDEYSERQTVTVRMLVPSDQIGCLIG 137
Query: 497 QGGHVINEMRRRTQADIRVV 516
+GG VI ++R T A IRV+
Sbjct: 138 KGGQVIQKLRNDTNAQIRVI 157
>gi|224112243|ref|XP_002316129.1| predicted protein [Populus trichocarpa]
gi|222865169|gb|EEF02300.1| predicted protein [Populus trichocarpa]
Length = 553
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 166/443 (37%), Positives = 254/443 (57%), Gaps = 54/443 (12%)
Query: 84 ASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVI 143
A +RN + KR +Q + G K+ N + +Q+ ++ DTVYR LCP RKIG +I
Sbjct: 2 AGQRNDYGKR--SQHSQSDYGGGKRRNPGDDPSDQNTITNE--DTVYRYLCPLRKIGSII 57
Query: 144 GKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESM 203
GK G I K LR ++++ I +++ +PG +ER++ IYSS + E+
Sbjct: 58 GKGGEIAKQLRADSKSNIRISEAMPGYDERIVTIYSSSEE------------TNLFGETG 105
Query: 204 EPHCAAQDALLKVHDRIIEEDL-----FGGMASDDDNENSTITARLLVPNNMVGCLLGKR 258
E C AQDAL VHDR+I EDL D+ E +T R+LVP + +GC++GK
Sbjct: 106 EYVCPAQDALFMVHDRVIAEDLNNAAAEEEEGEDNFGEVQQVTVRMLVPADQIGCVIGKG 165
Query: 259 GDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRK 318
G VIQ +RSET A IR+ D LPP A++ DE++ I G+P+ ++ALY+V+T LH+NP +
Sbjct: 166 GQVIQNIRSETCAQIRITKDDHLPPLALSIDELLLIHGEPSAVRKALYQVATRLHENPSR 225
Query: 319 DKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRM 378
+ H + A++H + N+ P +G YG+
Sbjct: 226 SQ--------------HLILSSSANVH---GGVFVTANA------GAPVLGLYGNYK--- 259
Query: 379 GSGSINSCPPGQMGEVSA-EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP 437
G +S P Q E S EFS++++C IGGVIGKGG +KQ++QE+ ASI V+ +
Sbjct: 260 -GGWSSSFYPDQRDESSTKEFSLRLVCPTANIGGVIGKGGGIIKQIRQESRASIKVDSSG 318
Query: 438 TDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEK----GTITTRLLVPSSKVGC 493
+ D+ +I SA E + +S T++A L+LQ + S+ +EK ITTRLLV S++GC
Sbjct: 319 AEGDDCIIFISAKE-FFEDQSPTMNAALRLQPRCSDKTEKESGDSVITTRLLVGRSQIGC 377
Query: 494 ILGQGGHVINEMRRRTQADIRVV 516
++G+GG +I+EMR +T+A+IR++
Sbjct: 378 LMGKGGAIISEMRNQTRANIRII 400
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 86/271 (31%), Positives = 130/271 (47%), Gaps = 46/271 (16%)
Query: 102 GVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKI 161
G+ G KG WS+S S + R++CP+ IGGVIGK G I+K +R+E++A I
Sbjct: 253 GLYGNYKGGWSSSFYPDQRDESSTKEFSLRLVCPTANIGGVIGKGGGIIKQIRQESRASI 312
Query: 162 TVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRII 221
V + G+E II+ S KE E +A L++ R
Sbjct: 313 KVDSS--GAEGDDCIIFISA------------------KEFFEDQSPTMNAALRLQPRCS 352
Query: 222 EEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRL 281
++ ++ ++ +S IT RLLV + +GCL+GK G +I +R++T ANIR++ D L
Sbjct: 353 DK-------TEKESGDSVITTRLLVGRSQIGCLMGKGGAIISEMRNQTRANIRIISEDNL 405
Query: 282 PPCAMNTDEM----------VQISGKPNVAKRALYEVSTLLHQNP-RKDKPPSSFPQAYG 330
P A+ DEM VQI+G VA AL +V L N +D ++FP A
Sbjct: 406 PKVAVEDDEMVQVNVYNFNSVQITGSLEVASNALLQVILRLKANLFGRDGALTAFPPAL- 464
Query: 331 GQNFHSPPAPMADMHPLGNSSWPARNSSLHG 361
P PM+ + S + +R+S G
Sbjct: 465 ------PYIPMS-LDTSDGSKYGSRDSQSRG 488
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 14/83 (16%)
Query: 475 SEKGTITT-----RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS 529
S++ TIT R L P K+G I+G+GG + ++R ++++IR+ + PG
Sbjct: 32 SDQNTITNEDTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRI-------SEAMPGY 84
Query: 530 SECIVDIRGSSE--HLISAHGTY 550
E IV I SSE +L G Y
Sbjct: 85 DERIVTIYSSSEETNLFGETGEY 107
>gi|224098894|ref|XP_002311309.1| predicted protein [Populus trichocarpa]
gi|222851129|gb|EEE88676.1| predicted protein [Populus trichocarpa]
Length = 447
Score = 236 bits (601), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 171/433 (39%), Positives = 251/433 (57%), Gaps = 66/433 (15%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
DTVYR LCP RKIG +IGK G I K LR ++++ I +++ +PG +ERV+ I+SS ++
Sbjct: 9 DTVYRYLCPLRKIGSIIGKGGEIAKQLRADSKSNIRISEAMPGYDERVVTIFSS----SE 64
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL-----FGGMASDDDNENSTIT 241
N +D+ E C AQDAL VHDR+I EDL D E +T
Sbjct: 65 ETNLFEDTG--------EYVCPAQDALFMVHDRVIAEDLNNAAAAEEEEEDRFGEVQQVT 116
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
R+LVP + +GC++GK G VIQ +RSET A IR+ + LPP A++TDE++ I G+P+V
Sbjct: 117 VRMLVPTDQIGCVIGKGGQVIQNIRSETRAQIRITKDEHLPPLALSTDELLLIHGEPSVV 176
Query: 302 KRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHG 361
++ALY+V+T LH+NP + + H L +SS S G
Sbjct: 177 RKALYQVATRLHENPSRSQ------------------------HLLLSSSANTYQSG--G 210
Query: 362 MPST-----PWMGGYGDQPSRMGSGSINSCPPGQMGEVSA-EFSMKILCSAGKIGGVIGK 415
M T P +G YG+ GS S +S P Q E SA +FS++++C IGGVIGK
Sbjct: 211 MFVTANAGAPLLGLYGNYK---GSWS-SSFYPDQRDEASAKDFSLRLVCPIANIGGVIGK 266
Query: 416 GGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS 475
GG +KQ++QE+ ASI V+ + + ++ +I SA E + +S T++A L++Q + SE +
Sbjct: 267 GGGIIKQIRQESRASIKVDSSGAEGNDCIIFISAKE-FFEDQSPTMNAALRMQPRCSEKT 325
Query: 476 EK----GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP---G 528
EK ITTRLLV S++GC++G+GG +I+EMR T+A+IR++ +D P G
Sbjct: 326 EKESGDSVITTRLLVGRSQIGCLMGKGGAIISEMRNLTRANIRIIS-----EDNLPKVAG 380
Query: 529 SSECIVDIRGSSE 541
+ +V I GS E
Sbjct: 381 EDDEMVQITGSLE 393
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 118/228 (51%), Gaps = 28/228 (12%)
Query: 102 GVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKI 161
G+ G KG+WS+S + D R++CP IGGVIGK G I+K +R+E++A I
Sbjct: 223 GLYGNYKGSWSSSFYPDQRDEASAKDFSLRLVCPIANIGGVIGKGGGIIKQIRQESRASI 282
Query: 162 TVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRII 221
V + G+E II+ S + + Q+ ++A M+P C+ +
Sbjct: 283 KVDSS--GAEGNDCIIFISAKEFFEDQSPTMNAALR-----MQPRCSEK----------- 324
Query: 222 EEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRL 281
++ ++ +S IT RLLV + +GCL+GK G +I +R+ T ANIR++ D L
Sbjct: 325 ---------TEKESGDSVITTRLLVGRSQIGCLMGKGGAIISEMRNLTRANIRIISEDNL 375
Query: 282 PPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNP-RKDKPPSSFPQA 328
P A DEMVQI+G VA AL +V L N +D ++FP A
Sbjct: 376 PKVAGEDDEMVQITGSLEVASNALLQVILRLKANIFGRDGALTTFPPA 423
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%), Gaps = 7/72 (9%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT-----IPGSEERV 174
FG Q R+L P+ +IG VIGK G +++++R ET+A+I + + S + +
Sbjct: 109 FGEVQ--QVTVRMLVPTDQIGCVIGKGGQVIQNIRSETRAQIRITKDEHLPPLALSTDEL 166
Query: 175 IIIYSSPTKIAK 186
++I+ P+ + K
Sbjct: 167 LLIHGEPSVVRK 178
>gi|302142130|emb|CBI19333.3| unnamed protein product [Vitis vinifera]
Length = 672
Score = 232 bits (592), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 168/453 (37%), Positives = 250/453 (55%), Gaps = 33/453 (7%)
Query: 108 KGNWSNS----SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
KG W S S+ QS S P V+R+LCP+ K G VIGK G I+ +R+ET K+ V
Sbjct: 22 KGKWQKSGGFYSQNQSLKIS-PGTVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRV 80
Query: 164 ADTIPGSEERVIIIYSSP--TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRII 221
+T+ G +ERV++I S T+ Q+K+DDS E S+ Q ALL V +R+
Sbjct: 81 EETVSGCDERVVLITGSDKDTEADNEQSKEDDSQVEKGISSV------QKALLLVFERMA 134
Query: 222 EEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRL 281
E + +D N++ T RLLV ++ VGCLLGK G VI+++ +E+GA IR+LP D+L
Sbjct: 135 EGESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKGGSVIKQMSAESGAQIRILPRDKL 194
Query: 282 PPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPM 341
P CA +DE+VQI+G+ + K+AL +S L +NP +D S + PP P
Sbjct: 195 PLCASPSDELVQITGELDACKQALQSISQQLLENPPRDYDIVSTNPTGSSSHLFGPPLPR 254
Query: 342 ADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSIN----SCPPGQMGEVSAE 397
++ P N S+PA+ + P+ G D + ++ S PG M
Sbjct: 255 SEAQPPPNYSFPAQGA--------PYAAGVRDTDYHSNTPQLHKFHESGMPGWMKPQDI- 305
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPR 457
+ ++LC ++GG+IGKGG +K LQ ETG I V D DS++RVI S +
Sbjct: 306 LTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVLDGVPDSEDRVIFISGSAHPDDRI 365
Query: 458 SQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
S DA+L++Q++ S++ T+ RLLV S+++GC+LG+GG +I EMR+ + A IR
Sbjct: 366 SPAQDAVLRVQSRIVRAIPDSKEKTVIARLLVSSTQIGCLLGKGGAIIAEMRKLSGAHIR 425
Query: 515 VVGARVKLQDPHPGS-SECIVDIRGSSEHLISA 546
++G K Q P S +E +V I G E + A
Sbjct: 426 ILG---KDQIPKCASENEEVVQINGEFEAVQEA 455
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
+ T ++VP S V I G+ G + ++R+ + A++ + +P PG+SE ++ I G
Sbjct: 597 STTVEVVVPRSLVPSIYGEDGGCLRQIRQ-------ISDAKITITEPKPGASETVIIISG 649
Query: 539 SSEHLISAHGTYQSFMTS 556
+ E +A Q+F+ S
Sbjct: 650 TPEQTHAAQSLIQAFVLS 667
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 121 GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIY 178
GN Q T ++ P + + G+ G ++ +R+ + AKIT+ + PG+ E VIII
Sbjct: 589 GNQQAIITSTTVEVVVPRSLVPSIYGEDGGCLRQIRQISDAKITITEPKPGASETVIIIS 648
Query: 179 SSPTKIAKTQN 189
+P + Q+
Sbjct: 649 GTPEQTHAAQS 659
>gi|326517934|dbj|BAK07219.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 632
Score = 229 bits (584), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 145/438 (33%), Positives = 241/438 (55%), Gaps = 41/438 (9%)
Query: 105 GIKKGNWSNSSREQSFGNSQPADT----------VYRILCPSRKIGGVIGKAGNIVKSLR 154
G + G + RE +PA T VYRILCP + IG VIGK G ++ S+R
Sbjct: 5 GKRTGQHRDHDREDRDQKRRPAHTQETSGMAELVVYRILCPDKVIGSVIGKGGKVINSIR 64
Query: 155 EETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALL 214
++T AK+ V D PG+++RVI++Y K D ++ + + EP CAAQ+ALL
Sbjct: 65 QQTNAKVKVVDPYPGADKRVILVYCY-VKHRDVMLSDINADDDDDR---EPVCAAQNALL 120
Query: 215 KVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIR 274
KVHD I+ G +A DD+++ A +LVP + ++GK G VI++LRS + + I+
Sbjct: 121 KVHDAIV-----GALAVTDDSDDK--EANILVPASQAASVIGKSGSVIKKLRSVSKSFIK 173
Query: 275 VL---PADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPP--SSFPQAY 329
V P+D CAM+ D VQI+G K+AL+ VST++++ P K+ P +S +
Sbjct: 174 VKPKDPSDVTHSCAMSFDNFVQITGDARAVKKALFAVSTIMYKCPSKENIPLETSIDELP 233
Query: 330 GGQNFHS--PPAPMADMHPLGNSSWPARNSSLHGMPSTPW----------MGGYGDQPSR 377
S P P + ++ + ++S P+ + SL + +T + +G P
Sbjct: 234 PTIILPSELPVYPASSLYSVSDASMPSGHPSLSILGATSRGSHVPDFTVPIDTHGGLP-- 291
Query: 378 MGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP 437
+ + + P + S E ++++C KIG VIGK G +K +++E+GA + V+DA
Sbjct: 292 IYQSMVPAVPTYNTPKCSGELLLRVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAK 351
Query: 438 TDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQ 497
D +E +I S+ E + +S ++A+L LQ K ++ +E + RLLVP + +GC++G+
Sbjct: 352 NDKEESIITVSSTEATDDVKSAAVEAVLLLQAKINDETED-RMHLRLLVPGNVIGCLIGK 410
Query: 498 GGHVINEMRRRTQADIRV 515
GG +IN+MR +++A I +
Sbjct: 411 GGSIINDMRNKSKAIIHI 428
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 90/370 (24%), Positives = 158/370 (42%), Gaps = 82/370 (22%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ + R++CP KIG VIGKAG +K++R+E+ A++ V D EE +I + S
Sbjct: 311 ELLLRVVCPGDKIGLVIGKAGMTIKNIRKESGARVDVDDAKNDKEESIITVSS------- 363
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
T+ DD +A A +A+L + +I +D + RLLV
Sbjct: 364 TEATDDVKSA------------AVEAVLLLQAKI------------NDETEDRMHLRLLV 399
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P N++GCL+GK G +I +R+++ A I + + P A ++DE+V++ G+ + + AL
Sbjct: 400 PGNVIGCLIGKGGSIINDMRNKSKAIIHISKGTK-PRKASSSDELVEVFGEVDKLRDALV 458
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNF-HSPPAPMADMHPLGNSSWPA----------- 354
++ L ++ KD + G QN +A P+ +SS+P
Sbjct: 459 QIVLRLREDVLKD--------SVGRQNSGKDGKLTVATTEPVSSSSFPMPALLPYSQQIT 510
Query: 355 ------------------RNSSLHGM-PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVS 395
R+S HG P G+G + S S P G+
Sbjct: 511 PLRHDQRGEVERGSNVFPRSSLYHGYSPREAVDDGFGVR------SSYTSKPYGRRVP-- 562
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
M++ + + V+GK G N+ +++ +GA I + ++ + + V W
Sbjct: 563 ---DMEMFIPSSGLSKVMGKHGTNLDNIRKISGADIEILESKSSRHDHVAHIFGTPEQWQ 619
Query: 456 PRSQTIDAIL 465
I A +
Sbjct: 620 SAENLIKAFI 629
>gi|255562910|ref|XP_002522460.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538345|gb|EEF39952.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 559
Score = 228 bits (580), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 172/465 (36%), Positives = 254/465 (54%), Gaps = 80/465 (17%)
Query: 84 ASKRNFFKKRPNNQFKRKGVVGIKK------GNWSNSSREQSFGNSQPADTVYRILCPSR 137
A +RN + KR N Q G G ++ G S+ ++Q DTVYR LCP R
Sbjct: 2 AGQRNDYGKRSNAQSDYGG--GKRRNPTADDGEDSDHQQQQQQHTITNEDTVYRYLCPLR 59
Query: 138 KIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAE 197
KIG +IG+ G I K LR E+++ I +++ + G EER++ IYS+ ++ N DS
Sbjct: 60 KIGSIIGRGGEIAKQLRSESKSNIRISEAMAGFEERIVTIYSN----SEESNLFGDSG-- 113
Query: 198 TKKESMEPHCAAQDALLKVHDRII-----------------EEDLFGGMASDDDNENSTI 240
E C AQDAL VHDRII EE+ FG +++ +
Sbjct: 114 ------EFVCPAQDALFMVHDRIIAEDLNNSNNNNEEEDDEEEEEFG------ESKEQVV 161
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T R+LVP + +GC++GK G VIQ +RSETGA IR+L + LPP A+++DE++ I G+P V
Sbjct: 162 TVRMLVPADQIGCVIGKGGQVIQSIRSETGAQIRILKDEHLPPLALSSDELLLIIGEPAV 221
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQAY-----GGQNFHSPPAPMADMHPLGNSSWPAR 355
++ALY+V+T LH+NP + + + GG F +P A + M
Sbjct: 222 VRKALYQVATRLHENPSRSQHLLLSSSSTNMYQSGGGMFVTPTAGASLM----------- 270
Query: 356 NSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGK 415
L+G W Y GS S EFS++++C G IGGVIGK
Sbjct: 271 --GLYGSYKGGWSSSYYSDQRDEGS--------------SKEFSLRLVCPIGNIGGVIGK 314
Query: 416 GGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS 475
GG +KQ++QE+ ASI V+ + + D+ +I SA E + +S T+ A L+LQ + SE +
Sbjct: 315 GGGIIKQIRQESRASIKVDSSAAEGDDCIIFISAKE-FFEDQSATLTAALRLQPRCSEKT 373
Query: 476 EKGT----ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
E+ + ITTRLLVP S++GC++G+GG +I+EMR T+A IR++
Sbjct: 374 ERDSGDSVITTRLLVPRSQIGCLMGKGGAIISEMRNVTRASIRIL 418
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/228 (34%), Positives = 114/228 (50%), Gaps = 28/228 (12%)
Query: 102 GVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKI 161
G+ G KG WS+S + R++CP IGGVIGK G I+K +R+E++A I
Sbjct: 271 GLYGSYKGGWSSSYYSDQRDEGSSKEFSLRLVCPIGNIGGVIGKGGGIIKQIRQESRASI 330
Query: 162 TVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRII 221
V + ++ +I I + KE E A A L++ R
Sbjct: 331 KVDSSAAEGDDCIIFI--------------------SAKEFFEDQSATLTAALRLQPRCS 370
Query: 222 EEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRL 281
E+ ++ D+ +S IT RLLVP + +GCL+GK G +I +R+ T A+IR+L D L
Sbjct: 371 EK-------TERDSGDSVITTRLLVPRSQIGCLMGKGGAIISEMRNVTRASIRILAEDNL 423
Query: 282 PPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNP-RKDKPPSSFPQA 328
P A DEMVQI+G +VA AL V L N +D ++FP A
Sbjct: 424 PKVASEDDEMVQITGSHDVASNALLHVVLRLKANLFGRDGALTAFPPA 471
>gi|449433573|ref|XP_004134572.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 625
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 226/422 (53%), Gaps = 67/422 (15%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
VYRILCP IG VIGK+G ++ S+R+ET+AKI V D PG+++RVI I+
Sbjct: 36 VVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITIFCF------V 89
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
++K +D + + + CAAQDALLKVH I G D + ++L+P
Sbjct: 90 KDK-EDVEVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDL--DRKQRDKEQCQILIP 146
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---CAMNTDEMVQISGKPNVAKRA 304
++ ++GK G I++LRS+T +I++ P D P CAM+ D I+G+P +RA
Sbjct: 147 SSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEGVRRA 206
Query: 305 LYEVSTLLHQN-PRKDKP--------------PSSFPQAYGGQNFHS-----PPA---PM 341
L+ +S+++++ PR++ P PS P G + S PP PM
Sbjct: 207 LFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPSDVPLYSAGGLYPSADPILPPRSIPPM 266
Query: 342 A------DMH--PLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGE 393
D+H P ++WP +SSL +P G I+ PP
Sbjct: 267 LGAQHVQDLHDYPESGNAWPLYSSSLPVVP-----------------GGISGHPP----- 304
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGL 453
S E +++LC IG VIGKGG +K ++Q +GA + V+D D DE +I S+FE L
Sbjct: 305 -SEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESL 363
Query: 454 WNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ +S ++ +L LQ K ++ E GT+ RLL+PS +GCI+G+ G +INE+R+ T+ADI
Sbjct: 364 DDLKSMAVETVLLLQEKIND-DEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADI 422
Query: 514 RV 515
R+
Sbjct: 423 RI 424
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 94/335 (28%), Positives = 158/335 (47%), Gaps = 57/335 (17%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V R+LCP IG VIGK G +KS+R+ + A++ V DT +E +I I S
Sbjct: 307 ELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISS------- 359
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
++ DD +SM A + +L + ++I +D+E T+ RLL+
Sbjct: 360 FESLDD-------LKSM-----AVETVLLLQEKI------------NDDEGGTVIMRLLI 395
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+ ++GC++GK G +I +R T A+IR+ D+L CA ++DE+V+++GK + AL
Sbjct: 396 PSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKL-KCASSSDELVEVTGKVGCVRDALV 454
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFH--------------SPPAPMADMHPLGNSSW 352
++ L + K++ + SP AP P+G +
Sbjct: 455 QIVLRLRDDALKERDVGHNSAIVTDSMYSSGSSFSMPSVLPSVSPGAP-----PMG---Y 506
Query: 353 PARNSSLHGMPSTPWMGGYGDQPSRMGS---GSINSCPPGQMGEVSAEFSMKILCSAGKI 409
R S G+ G YG MG G ++S G + S+++L A
Sbjct: 507 DQRAESGSGLGVLSSSGLYGSGSLSMGDNGYGYMSSYSSKLYGGLPPPSSLEMLIPANAA 566
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 444
G VIGKGG N+ +++ +GA I + D+ + +R+
Sbjct: 567 GKVIGKGGANIANIRKISGALIEISDSKSSRGDRI 601
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDI 536
+ R+L P +G ++G+ G VIN +R+ T+A I+VV DP PG+ + ++ I
Sbjct: 36 VVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVV-------DPFPGAKDRVITI 85
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 31/48 (64%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA 164
++ + + + R+L PS+ IG +IGK+G+I+ +R+ T+A I ++
Sbjct: 378 QEKINDDEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRIS 425
>gi|449525363|ref|XP_004169687.1| PREDICTED: KH domain-containing protein At4g18375-like, partial
[Cucumis sativus]
Length = 531
Score = 227 bits (579), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 148/422 (35%), Positives = 226/422 (53%), Gaps = 67/422 (15%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
VYRILCP IG VIGK+G ++ S+R+ET+AKI V D PG+++RVI I+
Sbjct: 36 VVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVVDPFPGAKDRVITIFCF------V 89
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
++K +D + + + CAAQDALLKVH I G D + ++L+P
Sbjct: 90 KDK-EDVEVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDL--DRKQRDKEQCQILIP 146
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---CAMNTDEMVQISGKPNVAKRA 304
++ ++GK G I++LRS+T +I++ P D P CAM+ D I+G+P +RA
Sbjct: 147 SSQSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHSCAMDFDNFAVIAGEPEGVRRA 206
Query: 305 LYEVSTLLHQ-NPRKDKP--------------PSSFPQAYGGQNFHS-----PPA---PM 341
L+ +S+++++ PR++ P PS P G + S PP PM
Sbjct: 207 LFAISSIMYKFPPREEIPLDTNVNEAPPNIIIPSDVPLYSAGGLYPSADPILPPRSIPPM 266
Query: 342 A------DMH--PLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGE 393
D+H P ++WP +SSL +P G I+ PP
Sbjct: 267 LGAQHVQDLHDYPESGNAWPLYSSSLPVVP-----------------GGISGHPP----- 304
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGL 453
S E +++LC IG VIGKGG +K ++Q +GA + V+D D DE +I S+FE L
Sbjct: 305 -SEELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISSFESL 363
Query: 454 WNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ +S ++ +L LQ K ++ E GT+ RLL+PS +GCI+G+ G +INE+R+ T+ADI
Sbjct: 364 DDLKSMAVETVLLLQEKIND-DEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADI 422
Query: 514 RV 515
R+
Sbjct: 423 RI 424
Score = 99.8 bits (247), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 105/194 (54%), Gaps = 32/194 (16%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V R+LCP IG VIGK G +KS+R+ + A++ V DT +E +I I S
Sbjct: 307 ELVVRVLCPFDNIGRVIGKGGGTIKSIRQASGARVEVDDTKRDCDECIITISS------- 359
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
++ DD +SM A + +L + ++I +D+E T+ RLL+
Sbjct: 360 FESLDD-------LKSM-----AVETVLLLQEKI------------NDDEGGTVIMRLLI 395
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+ ++GC++GK G +I +R T A+IR+ D+L CA ++DE+V+++GK + AL
Sbjct: 396 PSKVIGCIIGKSGSIINEIRKSTRADIRISKGDKL-KCASSSDELVEVTGKVGCVRDALV 454
Query: 307 EVSTLLHQNPRKDK 320
++ L + K++
Sbjct: 455 QIVLRLRDDALKER 468
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/157 (21%), Positives = 62/157 (39%), Gaps = 22/157 (14%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSE------CI 533
+ R+L P +G ++G+ G VIN +R+ T+A I+VV DP PG+ + C
Sbjct: 36 VVYRILCPDEVIGSVIGKSGKVINSIRQETRAKIKVV-------DPFPGAKDRVITIFCF 88
Query: 534 V----DIRGSSEH-----LISAHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQTMSSHQ 584
V D+ E L +A + + + CQ +
Sbjct: 89 VKDKEDVEVDDEFNDRQTLCAAQDALLKVHAAIANALASAGDLDRKQRDKEQCQILIPSS 148
Query: 585 SSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSYPMHT 621
S + S ++ ++ I+P+ ++ P+H+
Sbjct: 149 QSANVIGKAGSTIKKLRSKTRTSIKISPKDATDPIHS 185
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/48 (31%), Positives = 31/48 (64%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA 164
++ + + + R+L PS+ IG +IGK+G+I+ +R+ T+A I ++
Sbjct: 378 QEKINDDEGGTVIMRLLIPSKVIGCIIGKSGSIINEIRKSTRADIRIS 425
>gi|356525090|ref|XP_003531160.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 625
Score = 227 bits (578), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 153/424 (36%), Positives = 234/424 (55%), Gaps = 28/424 (6%)
Query: 129 VYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ 188
VYRILCP IG VIGK G ++ S+R+ET+AK+ V D PGS++RVI IY K +
Sbjct: 38 VYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGSKDRVITIYCY-VKEKEDV 96
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
DD+ A + EP CAAQDALLKVH I + + ++LVP+
Sbjct: 97 EIDDEFAGK------EPLCAAQDALLKVHVAIANS--IAAIGDSEKKRKDRDECQILVPS 148
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---CAMNTDEMVQISGKPNVAKRAL 305
+ ++GK G I++LRS+T ANI+V D P CAM D V I+G+ KRAL
Sbjct: 149 SQSANIIGKAGATIKKLRSKTRANIKVTAKDAADPTHSCAMEFDNFVVITGESEAVKRAL 208
Query: 306 YEVSTLLHQ-NPRKD-KPPSSFPQAYGGQNFHS--PPAPMADMHPLGNS-SWPARNSSLH 360
+ VS+++++ PR+D ++ P+A S P P ++P + P +
Sbjct: 209 FAVSSIMYKFGPREDISLDTAVPEAPPSIIIPSDVPVYPPGGLYPASDPIVTPRAVPQII 268
Query: 361 GMPSTPWMGGYGDQPSR--MGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
G + P + GY D + M S ++ G S E +++LC + KIG VIGKGG
Sbjct: 269 GATNVPDLQGYADAGNSWPMYSSAL-PVVSGVGASRSEELIIRMLCPSDKIGRVIGKGGS 327
Query: 419 NVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG 478
+K ++Q +GA I V+D+ + DE +I + E + +S ++A+L +Q K ++ +
Sbjct: 328 TIKSMRQASGAHIEVDDSKANFDECLIIITTTESPSDLKSMAVEAVLLMQGKIND-EDDT 386
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV-GARVKLQDPHP------GSSE 531
T++ RLLVPS +GCI+G+ G +INE+R+RT+AD+R+ G + K D + GS +
Sbjct: 387 TVSIRLLVPSKVIGCIIGKSGSIINEIRKRTKADVRISKGDKPKCADANDELVEVGGSVD 446
Query: 532 CIVD 535
C+ D
Sbjct: 447 CVRD 450
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 99/336 (29%), Positives = 172/336 (51%), Gaps = 44/336 (13%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYS 179
G S+ + + R+LCPS KIG VIGK G+ +KS+R+ + A I V D+ +E +III +
Sbjct: 299 VGASRSEELIIRMLCPSDKIGRVIGKGGSTIKSMRQASGAHIEVDDSKANFDECLIIITT 358
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+ +S ++ K ++E A+L + +I +ED ++T
Sbjct: 359 T------------ESPSDLKSMAVE-------AVLLMQGKINDED------------DTT 387
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
++ RLLVP+ ++GC++GK G +I +R T A++R+ D+ P CA DE+V++ G +
Sbjct: 388 VSIRLLVPSKVIGCIIGKSGSIINEIRKRTKADVRISKGDK-PKCADANDELVEVGGSVD 446
Query: 300 VAKRALYEVSTLLHQNPRKDK-----PPSSFPQAYGGQNFHSPPAPMADMHPLGN-SSWP 353
+ AL ++ L + +++ P Y G S P+ M + P+ +
Sbjct: 447 CVRDALIQIILRLRDDVLRERDTGHNPSIGAESLYPGSAGLSLPSMMHSVPPVAAPMVYD 506
Query: 354 ARNSSLHGM----PSTPWMGGYGDQP-SRMGSGSINSCPPGQMGEVSAEFSMKILCSAGK 408
R S G+ PS+P+ GGYG P G GS++S G + ++ +L A
Sbjct: 507 HRAESGAGLGMLSPSSPY-GGYGSLPMGDNGYGSMSSYATKLYGGLPPPSTLDMLIPANA 565
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 444
+G V+GKGG N+ +++ +GASI + D + +R+
Sbjct: 566 VGKVLGKGGANIANIRKISGASIEISDNKSARGDRI 601
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDI 536
I R+L P +G ++G+ G VIN +R+ T+A ++VV DP PGS + ++ I
Sbjct: 37 IVYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVV-------DPFPGSKDRVITI 86
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 28/45 (62%)
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVL 276
DD + I R+L P+ ++G ++GK G VI +R ET A ++V+
Sbjct: 29 DDRGNDELIVYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVV 73
>gi|449436912|ref|XP_004136236.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449522219|ref|XP_004168125.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 693
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 165/476 (34%), Positives = 238/476 (50%), Gaps = 47/476 (9%)
Query: 108 KGNWSNSS-----REQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKIT 162
KG W SS R QSF S P V+R+L P +I ++G+ G+ + +REET +I
Sbjct: 22 KGKWQKSSGSRSRRNQSFKLS-PGYAVFRVLFPVSRIDSLVGRDGDGLSKIREETGVEIR 80
Query: 163 VADTIPGSEERVIIIYSS-------PTKIAKTQNK-------DDDSAAETKKESME---- 204
V DTIPG +ER+ +I S P K +K NK D D A KKE +
Sbjct: 81 VEDTIPGCDERIAVIGGSNQETEVNPEKKSKEDNKNSEVEENDGDIAKLKKKEDKDSPPV 140
Query: 205 --------PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLG 256
H + AL V ++I +E+ + ++ T RLLV ++ VGCLLG
Sbjct: 141 EDAKQKEVTHSQLRKALFLVSEKIFDEEPEADGTDVEGDKLPTFILRLLVLSSQVGCLLG 200
Query: 257 KRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNP 316
K G V++++ S++GA IR+LP D+LPP E+VQISG +V K+AL V L +NP
Sbjct: 201 KGGSVVKQMSSDSGAQIRILPRDKLPPFVATNVELVQISGGIDVVKKALELVFQQLIENP 260
Query: 317 RKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP-STPW-MGGYGDQ 374
DK P + A A P G+S + HG P S P +G +
Sbjct: 261 PNDKDPVASSNAAQSSRSSGQSLSRAHESPRGSS------FNTHGGPYSVPRDVGNFHSS 314
Query: 375 PSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 434
+ +C PG+ S ++LC ++G VIGKGG VK LQQ+TG I V
Sbjct: 315 APSLAPKQYEACIPGRSKPSHEILSYRLLCPTERVGNVIGKGGAIVKTLQQDTGCDIKVV 374
Query: 435 DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN---KTSEFSEKGTITTRLLVPSSKV 491
D DS++R+I + + S DA+ ++Q K + S++ + R LV S+++
Sbjct: 375 DGALDSEDRIILVAGPAHPDDRISPVQDAVFRVQARIVKAAADSKEQNLVARFLVSSNQI 434
Query: 492 GCILGQGGHVINEMRRRTQADIRVVGARVKLQDPH-PGSSECIVDIRGSSEHLISA 546
GC+LG+GG +I EMR+ T A IR++G K Q P G E +V I G E + A
Sbjct: 435 GCLLGKGGSIIAEMRKSTGAYIRILG---KEQIPKCAGEDEEVVQINGEPETVQDA 487
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 125/455 (27%), Positives = 205/455 (45%), Gaps = 114/455 (25%)
Query: 121 GNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIY 178
G S+P+ + YR+LCP+ ++G VIGK G IVK+L+++T I V D SE+R+I++
Sbjct: 329 GRSKPSHEILSYRLLCPTERVGNVIGKGGAIVKTLQQDTGCDIKVVDGALDSEDRIILV- 387
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
A + DD + P QDA+ +V RI++ A+D +N
Sbjct: 388 ------AGPAHPDD---------RISP---VQDAVFRVQARIVK------AAADSKEQN- 422
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+ AR LV +N +GCLLGK G +I +R TGA IR+L +++P CA +E+VQI+G+P
Sbjct: 423 -LVARFLVSSNQIGCLLGKGGSIIAEMRKSTGAYIRILGKEQIPKCAGEDEEVVQINGEP 481
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPS--------------SFPQAYGGQNFHSPPAPMADM 344
+ A+++++T L + +D PS SFP +G + SPP + +
Sbjct: 482 ETVQDAMFQITTRLRHHFFRDAFPSVNSHSNPAFIDRLPSFPSYFGRREL-SPPGIYSSL 540
Query: 345 HPLGNSSWPARNSSLHGMPSTPWMGGYGDQP---SRMGSGSINSCPPGQMGEVSAEFSMK 401
P + + +L G+PS + D+P R G+ ++ P
Sbjct: 541 GPSFH-----KFDALSGIPSLSDL--RDDRPPFLHRPGAPLLSDRKP------------- 580
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTI 461
S G + G +G F A H R + F G +P
Sbjct: 581 -WSSQGLVEGGVGLSDF----------AGAHHR-----------RIAGFGGGNSP----- 613
Query: 462 DAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVK 521
AI+ TS E + R +VP I G+ G + ++R ++ A++
Sbjct: 614 -AII-----TSTTVE--VVVPRNIVP-----VICGENGECLKQIR-------QISDAKIT 653
Query: 522 LQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS 556
+ +P G E ++ I G+ E +A Q+F+ S
Sbjct: 654 ITEPKQGDVETMIIISGTPEQTHAAQSLIQAFVIS 688
>gi|357145086|ref|XP_003573519.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 632
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 142/409 (34%), Positives = 225/409 (55%), Gaps = 39/409 (9%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
VYRILCP + IG VIGK G ++ S+R++T AK+ V D PG+++RVI++Y T
Sbjct: 39 VVYRILCPDKVIGSVIGKNGKVINSIRQQTNAKVKVVDPYPGADKRVILVYCHVHHRDLT 98
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
D + + EP CAAQ+ALLKVHD I+E + SD D+E A +LVP
Sbjct: 99 HRDIDVDDDDDR----EPVCAAQNALLKVHDAIVEA---LAINSDSDDEE----ANILVP 147
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPAD---RLPPCAMNTDEMVQISGKPNVAKRA 304
+ ++GK G VI+RLRS + ++I+V P D CAM+ D VQI+G K+A
Sbjct: 148 ASQAASVIGKSGSVIKRLRSISKSSIKVRPKDPSEVTHSCAMSFDNFVQITGDARAVKKA 207
Query: 305 LYEVSTLLHQNPRKD---------------KPPSSFPQAYGGQNFHSPPAPMAD-MHPLG 348
L+ VS +++++P K+ PS P Y NF+S ++D P G
Sbjct: 208 LFAVSAIIYKSPSKEIIPLETSVQELPPSIIIPSELP-VYPASNFYS----LSDGAMPSG 262
Query: 349 NSSWPARNSSLHGMPSTPWMGGYGDQPSRM--GSGSINSCPPGQMGEVSAEFSMKILCSA 406
+ S P + H + P D R+ + + P + S + ++++C
Sbjct: 263 HPSLPILGAP-HHVSRIPEFTVPADAHGRLPIYQSMVPAIPTYSTPKGSGDLLLRVVCPG 321
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQ 466
KIG VIGKGG +K +++E+GA+I V+DA D +E +I ++ E + +S ++A+L
Sbjct: 322 DKIGLVIGKGGMTIKSIRKESGANIDVDDAKNDREESIITVTSTEATDDVKSAAVEAVLL 381
Query: 467 LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
LQ K ++ E + RLLVP + +GC++G+GG ++N+MR +++A I +
Sbjct: 382 LQAKINDGIED-RMHIRLLVPGNVIGCLIGKGGSIVNDMRNKSKAIIHI 429
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 85/321 (26%), Positives = 143/321 (44%), Gaps = 49/321 (15%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D + R++CP KIG VIGK G +KS+R+E+ A I V D EE +I + S
Sbjct: 312 DLLLRVVCPGDKIGLVIGKGGMTIKSIRKESGANIDVDDAKNDREESIITVTS------- 364
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
T+ DD + AA +A+L + +I +D + RLLV
Sbjct: 365 TEATDDVKS------------AAVEAVLLLQAKI------------NDGIEDRMHIRLLV 400
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P N++GCL+GK G ++ +R+++ A I + + P A ++DE+V++ G+ + + AL
Sbjct: 401 PGNVIGCLIGKGGSIVNDMRNKSKAIIHISKGSK-PRRASSSDELVEVFGEVDKLRDALV 459
Query: 307 EVSTLLHQNPRKD-----------KPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPAR 355
++ L ++ KD K + + NF S PA + + S+ R
Sbjct: 460 QIVLRLREDVLKDSVERQNSDKDGKRTIAITEPMYSSNF-SMPALLPSTRQVSPLSYDQR 518
Query: 356 NSSLHGM---PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGV 412
G+ P + Q G G+ +S G + M + A + V
Sbjct: 519 GEVERGLDVYPRSSSYRYSSLQAVDDGYGAHSSYTSKSYGGRRPDIEM--IIPASGLSKV 576
Query: 413 IGKGGFNVKQLQQETGASIHV 433
IGK G N+ +++ +GA I +
Sbjct: 577 IGKRGTNLDNIRKISGADIEI 597
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 34/55 (61%), Gaps = 7/55 (12%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIV 534
+ R+L P +G ++G+ G VIN +R++T A ++VV DP+PG+ + ++
Sbjct: 39 VVYRILCPDKVIGSVIGKNGKVINSIRQQTNAKVKVV-------DPYPGADKRVI 86
>gi|147845094|emb|CAN78473.1| hypothetical protein VITISV_026793 [Vitis vinifera]
Length = 709
Score = 224 bits (571), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 253/476 (53%), Gaps = 50/476 (10%)
Query: 108 KGNWSNS----SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
KG W S S+ QS S P V+R+LCP+ K G VIGK G I+ +R+ET K+ V
Sbjct: 22 KGKWQKSGGFYSQNQSLKIS-PGTVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRV 80
Query: 164 ADTIPGSEERVIIIYSSP--TKIAKTQNKDDDS---AAETKKESMEPH------------ 206
+T+ G +ERV++I S T+ Q+K+D AAE ++ EP
Sbjct: 81 EETVSGCDERVVLITGSDKDTEADNEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVE 140
Query: 207 --------CAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKR 258
+ Q ALL V +R+ E + +D N++ T RLLV ++ VGCLLGK
Sbjct: 141 DSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKG 200
Query: 259 GDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRK 318
G VI+++ +E+GA IR+LP D+LP CA +DE+VQI+G+ + K+AL +S L +NP +
Sbjct: 201 GSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQALQSISQQLLENPPR 260
Query: 319 DKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRM 378
D S + PP P ++ P N S+PA+ + P+ G D
Sbjct: 261 DYDIVSTNPTGSSSHLFGPPLPRSEAQPPPNYSFPAQGA--------PYAAGVRDTDYHS 312
Query: 379 GSGSIN----SCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 434
+ ++ S PG M + ++LC ++GG+IGKGG +K LQ ETG I V
Sbjct: 313 NTPQLHKFHESGMPGXMKPQDI-LTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVL 371
Query: 435 DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKV 491
D DS++RVI S + S DA+L++Q++ S++ T+ RLLV S+++
Sbjct: 372 DGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVRAIPDSKEKTVIARLLVSSTQI 431
Query: 492 GCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS-SECIVDIRGSSEHLISA 546
GC+LG+GG +I EMR+ + A IR++G K Q P S +E +V I G E + A
Sbjct: 432 GCLLGKGGAIIAEMRKLSGAHIRILG---KDQIPKCASENEEVVQINGEFEAVQEA 484
>gi|225458964|ref|XP_002283591.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 701
Score = 223 bits (569), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 169/476 (35%), Positives = 253/476 (53%), Gaps = 50/476 (10%)
Query: 108 KGNWSNS----SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
KG W S S+ QS S P V+R+LCP+ K G VIGK G I+ +R+ET K+ V
Sbjct: 22 KGKWQKSGGFYSQNQSLKIS-PGTVVFRVLCPASKTGSVIGKGGTIISQIRQETGVKVRV 80
Query: 164 ADTIPGSEERVIIIYSSP--TKIAKTQNKDDDS---AAETKKESMEPH------------ 206
+T+ G +ERV++I S T+ Q+K+D AAE ++ EP
Sbjct: 81 EETVSGCDERVVLITGSDKDTEADNEQSKEDGEDTKAAEEVSDTKEPGENDEDKESVPVE 140
Query: 207 --------CAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKR 258
+ Q ALL V +R+ E + +D N++ T RLLV ++ VGCLLGK
Sbjct: 141 DSQVEKGISSVQKALLLVFERMAEGESETNGGDEDSNKSPTFVVRLLVLSSQVGCLLGKG 200
Query: 259 GDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRK 318
G VI+++ +E+GA IR+LP D+LP CA +DE+VQI+G+ + K+AL +S L +NP +
Sbjct: 201 GSVIKQMSAESGAQIRILPRDKLPLCASPSDELVQITGELDACKQALQSISQQLLENPPR 260
Query: 319 DKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRM 378
D S + PP P ++ P N S+PA+ + P+ G D
Sbjct: 261 DYDIVSTNPTGSSSHLFGPPLPRSEAQPPPNYSFPAQGA--------PYAAGVRDTDYHS 312
Query: 379 GSGSIN----SCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 434
+ ++ S PG M + ++LC ++GG+IGKGG +K LQ ETG I V
Sbjct: 313 NTPQLHKFHESGMPGWMKPQDI-LTFRLLCHDERVGGIIGKGGTIIKNLQNETGCEIKVL 371
Query: 435 DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKV 491
D DS++RVI S + S DA+L++Q++ S++ T+ RLLV S+++
Sbjct: 372 DGVPDSEDRVIFISGSAHPDDRISPAQDAVLRVQSRIVRAIPDSKEKTVIARLLVSSTQI 431
Query: 492 GCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS-SECIVDIRGSSEHLISA 546
GC+LG+GG +I EMR+ + A IR++G K Q P S +E +V I G E + A
Sbjct: 432 GCLLGKGGAIIAEMRKLSGAHIRILG---KDQIPKCASENEEVVQINGEFEAVQEA 484
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
+ T ++VP S V I G+ G + ++R+ + A++ + +P PG+SE ++ I G
Sbjct: 626 STTVEVVVPRSLVPSIYGEDGGCLRQIRQ-------ISDAKITITEPKPGASETVIIISG 678
Query: 539 SSEHLISAHGTYQSFMTS 556
+ E +A Q+F+ S
Sbjct: 679 TPEQTHAAQSLIQAFVLS 696
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 121 GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIY 178
GN Q T ++ P + + G+ G ++ +R+ + AKIT+ + PG+ E VIII
Sbjct: 618 GNQQAIITSTTVEVVVPRSLVPSIYGEDGGCLRQIRQISDAKITITEPKPGASETVIIIS 677
Query: 179 SSPTKIAKTQN 189
+P + Q+
Sbjct: 678 GTPEQTHAAQS 688
>gi|225443912|ref|XP_002278367.1| PREDICTED: KH domain-containing protein At4g18375 [Vitis vinifera]
Length = 623
Score = 223 bits (567), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 222/396 (56%), Gaps = 19/396 (4%)
Query: 129 VYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ 188
VYRILCP IG VIGK+G ++ S+R++T+AKI V D PG+++RVI IY + + +
Sbjct: 38 VYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVE 97
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
+ + +P C AQDALLKVH I+ + + + D + ++LVP+
Sbjct: 98 -------VDDEFNDKQPLCPAQDALLKVHAAIV--NAVASLENSDKKKKDKEECQILVPS 148
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---CAMNTDEMVQISGKPNVAKRAL 305
+ ++GK G I+RLRS+T ANI++ D P CAM D V I+G K+AL
Sbjct: 149 SQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEAVKKAL 208
Query: 306 YEVSTLLHQ-NPRKDKP-PSSFPQAYGGQNFHS--PPAPMADMHPLGNSSWPARNS-SLH 360
+ +S ++++ PR++ P ++ P+A S P P +P +S AR+ +
Sbjct: 209 FAISAIMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPAGGFYPSADSIVSARSVPPVL 268
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINS-CPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
P + GY D S S N G S E +++LC KIG VIG+GG +
Sbjct: 269 AATHVPELQGYSDMGSTWPVYSSNLPVVSGYGASRSEELIIRVLCPFDKIGRVIGRGGSS 328
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT 479
+K +++ +GA + V+D D DE +I ++ E + + +S ++A+L LQ K ++ + T
Sbjct: 329 IKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSMAVEAVLLLQAKIND-EDDDT 387
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ RLLVPS +GCI+G+ G +INE+R+RT+AD+R+
Sbjct: 388 VAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRI 423
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 162/333 (48%), Gaps = 40/333 (12%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYS 179
+G S+ + + R+LCP KIG VIG+ G+ +KS+RE + A + V DT +E +I + S
Sbjct: 299 YGASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTS 358
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
T++ DD +SM A +A+L + +I +ED + T
Sbjct: 359 -------TESVDD-------LKSM-----AVEAVLLLQAKINDED------------DDT 387
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ RLLVP+ ++GC++GK G +I +R T A++R+ ++R P CA DE++++ G+
Sbjct: 388 VAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRISKSER-PKCADANDELIEVVGEVG 446
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQA-----YGGQNFHSPPAPMADMHPLGNSSWPA 354
+ AL ++ L + KD+ A Y G S + + P+ S+
Sbjct: 447 SVRDALVQIVLRLRDDALKDRDTGHNTSAGTDSLYSGGAGLSVSSVLPSAPPVAPLSYDQ 506
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGS---GSINSCPPGQMGEVSAEFSMKILCSAGKIGG 411
R + G+ YG +G GS++S G + + ++ A +G
Sbjct: 507 RAETGSGLGLLSSSSLYGYGSLSVGENAYGSMSSYSSKLYGGLPTPSTFDMVIPANAVGK 566
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 444
V+GKGG N+ +++ +GA I + D+ + +RV
Sbjct: 567 VMGKGGANIANIRKISGAVIEISDSKSSRGDRV 599
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 11/83 (13%)
Query: 457 RSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
R Q D +Q + + +E EKG+ I R+L P +G ++G+ G VIN +R+ T+A I
Sbjct: 12 RDQDGDNKIQ-KRRVNERDEKGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKI 70
Query: 514 RVVGARVKLQDPHPGSSECIVDI 536
+VV DP PG+ + ++ I
Sbjct: 71 KVV-------DPFPGAKDRVITI 86
Score = 39.7 bits (91), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 210 QDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSET 269
QD K+ R + E D+ + I R+L P+ ++G ++GK G VI +R +T
Sbjct: 14 QDGDNKIQKRRVNE-------RDEKGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDT 66
Query: 270 GANIRVL 276
A I+V+
Sbjct: 67 RAKIKVV 73
>gi|147818880|emb|CAN73780.1| hypothetical protein VITISV_042181 [Vitis vinifera]
Length = 637
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 139/396 (35%), Positives = 222/396 (56%), Gaps = 19/396 (4%)
Query: 129 VYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ 188
VYRILCP IG VIGK+G ++ S+R++T+AKI V D PG+++RVI IY + + +
Sbjct: 38 VYRILCPDGVIGSVIGKSGKVINSIRQDTRAKIKVVDPFPGAKDRVITIYCYVKEKEEVE 97
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
+ + +P C AQDALLKVH I+ + + + D + ++LVP+
Sbjct: 98 -------VDDEFNDKQPLCPAQDALLKVHAAIV--NAVASLENSDKKKKDKEECQILVPS 148
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---CAMNTDEMVQISGKPNVAKRAL 305
+ ++GK G I+RLRS+T ANI++ D P CAM D V I+G K+AL
Sbjct: 149 SQSANVIGKAGATIKRLRSKTRANIKITAKDSTDPSHSCAMEFDNFVLIAGDSEAVKKAL 208
Query: 306 YEVSTLLHQ-NPRKDKP-PSSFPQAYGGQNFHS--PPAPMADMHPLGNSSWPARNS-SLH 360
+ +S ++++ PR++ P ++ P+A S P P +P +S AR+ +
Sbjct: 209 FAISAIMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPAGGFYPSADSIVSARSVPPVL 268
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINS-CPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
P + GY D S S N G S E +++LC KIG VIG+GG +
Sbjct: 269 AATHVPELQGYSDMGSTWPVYSSNLPVVSGYGASRSEELIIRVLCPFDKIGRVIGRGGSS 328
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT 479
+K +++ +GA + V+D D DE +I ++ E + + +S ++A+L LQ K ++ + T
Sbjct: 329 IKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSMAVEAVLLLQAKIND-EDDDT 387
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ RLLVPS +GCI+G+ G +INE+R+RT+AD+R+
Sbjct: 388 VAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRI 423
Score = 111 bits (277), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/351 (25%), Positives = 161/351 (45%), Gaps = 62/351 (17%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYS 179
+G S+ + + R+LCP KIG VIG+ G+ +KS+RE + A + V DT +E +I + S
Sbjct: 299 YGASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTS 358
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
T++ DD +SM A +A+L + +I +ED + T
Sbjct: 359 -------TESVDD-------LKSM-----AVEAVLLLQAKINDED------------DDT 387
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ RLLVP+ ++GC++GK G +I +R T A++R+ ++R P CA DE++++ G+
Sbjct: 388 VAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRISKSER-PKCADANDELIEVVGEVG 446
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQA-----YGGQNFHSPPAPMADMHPLGNSSWPA 354
+ AL ++ L + KD+ A Y G S + + P+ S+
Sbjct: 447 SVRDALVQIVLRLRDDALKDRDTGHNTSAGTDSLYSGGAGLSVSSVLPSAPPVAPLSYDQ 506
Query: 355 RNSSLHGMPSTPWM---------------------GGYGDQPSRMGSGSINSCPPGQMGE 393
R + G+ G G+ GS++S G
Sbjct: 507 RAETGSGLGLLSSSSLYGYGSLSLFFAVKVVVVFNGEVGEN----AYGSMSSYSSKLYGG 562
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 444
+ + ++ A +G V+GKGG N+ +++ +GA I + D+ + +RV
Sbjct: 563 LPTPSTFDMVIPANAVGKVMGKGGANIANIRKISGAVIEISDSKSSRGDRV 613
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 11/83 (13%)
Query: 457 RSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
R Q D +Q + + +E EKG+ I R+L P +G ++G+ G VIN +R+ T+A I
Sbjct: 12 RDQDGDNKIQ-KRRVNERDEKGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDTRAKI 70
Query: 514 RVVGARVKLQDPHPGSSECIVDI 536
+VV DP PG+ + ++ I
Sbjct: 71 KVV-------DPFPGAKDRVITI 86
Score = 39.7 bits (91), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 7/67 (10%)
Query: 210 QDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSET 269
QD K+ R + E D+ + I R+L P+ ++G ++GK G VI +R +T
Sbjct: 14 QDGDNKIQKRRVNE-------RDEKGSDELIVYRILCPDGVIGSVIGKSGKVINSIRQDT 66
Query: 270 GANIRVL 276
A I+V+
Sbjct: 67 RAKIKVV 73
>gi|255584811|ref|XP_002533123.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223527086|gb|EEF29268.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 405
Score = 222 bits (566), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 129/298 (43%), Positives = 191/298 (64%), Gaps = 29/298 (9%)
Query: 229 MASDDDNENS-TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMN 287
M SDDD+E +TARL+VP++ +GC++GK G ++Q +RSETGA IR+L + LPPCA++
Sbjct: 1 MHSDDDSEGGHQVTARLIVPSDQIGCIIGKGGQIVQNIRSETGAQIRILKDEHLPPCALS 60
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPP--SSFPQAYGGQNFHSPPAPMADMH 345
TDE+VQISG+ V K+ALY+++T LH+NP + + S+ P Y PA + +
Sbjct: 61 TDELVQISGEVAVVKKALYQIATRLHENPSRTQHLLFSAVPNVY--------PATGSLIG 112
Query: 346 PLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMG--SGSINSCPPGQMGEVSAEFSMKIL 403
P G + + G+ P M YG G S S+ S P ++ S EFS++I+
Sbjct: 113 PTG--------APIVGI--APLMSTYGGYKGDAGDWSRSLYSAPRDELS--SKEFSLRIV 160
Query: 404 CSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDA 463
C G IGGVIGKGG + Q++QE+GA I V+ + + D+ +I SA E + S TI+A
Sbjct: 161 CPTGNIGGVIGKGGTIINQIRQESGAVIKVDSSTAEGDDCLITVSAKEFFDDQYSPTIEA 220
Query: 464 ILQLQNKTSE--FSEKGTI--TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
++LQ + SE + G I TTRLLVP+S++GC+LG+GG +INEMR+ T+A+IR++G
Sbjct: 221 AIRLQPRCSEKIARDSGLISFTTRLLVPTSRIGCLLGKGGVIINEMRKVTKANIRILG 278
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 73/207 (35%), Positives = 98/207 (47%), Gaps = 26/207 (12%)
Query: 109 GNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
G+WS S + RI+CP+ IGGVIGK G I+ +R+E+ A I V +
Sbjct: 136 GDWSRSLYSAPRDELSSKEFSLRIVCPTGNIGGVIGKGGTIINQIRQESGAVIKVDSSTA 195
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
++ +I + AK D S ++P C+ + A
Sbjct: 196 EGDDCLITVS------AKEFFDDQYSPTIEAAIRLQPRCSEKIA---------------- 233
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
D+ + T RLLVP + +GCLLGK G +I +R T ANIR+L D LP A
Sbjct: 234 ----RDSGLISFTTRLLVPTSRIGCLLGKGGVIINEMRKVTKANIRILGKDNLPKVASED 289
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQN 315
DEMVQISG +VAK AL VS L N
Sbjct: 290 DEMVQISGDLDVAKDALTHVSRRLRAN 316
>gi|297849822|ref|XP_002892792.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
gi|297338634|gb|EFH69051.1| hypothetical protein ARALYDRAFT_471578 [Arabidopsis lyrata subsp.
lyrata]
Length = 477
Score = 221 bits (562), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 162/442 (36%), Positives = 242/442 (54%), Gaps = 61/442 (13%)
Query: 82 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 141
M ++ RN KR N Q + G G K+ N + + + G+ + TVYR LCP +K G
Sbjct: 1 MASTLRNIHGKRSNLQSELTGNGGSKRRNLHDDTDQNVIGSEE---TVYRYLCPVKKTGS 57
Query: 142 VIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 201
+IGK G+I K +R ET++ + + + +PG EERV+ IYS+ ++ + DD
Sbjct: 58 IIGKGGDIAKQIRSETKSNMRINEALPGCEERVVTIYSTNEEL---NHFGDDG------- 107
Query: 202 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD-NENSTITARLLVPNNMVGCLLGKRGD 260
E C A DAL KVHD ++ + DDD E T+T R+LVP++ +GC++GK G
Sbjct: 108 --ELVCPALDALFKVHDMVVADIDHDDGNDDDDLGEKQTVTVRMLVPSDQIGCVIGKGGQ 165
Query: 261 VIQRLRSETGANIRVLPADRLPPCAMNT--DEMVQISGKPNVAKRALYEVSTLLHQNPRK 318
VIQ LR++T A IRV+ D LP CA+ DE++QI G+P V + ALY+V++LLH N
Sbjct: 166 VIQNLRNDTNAQIRVIK-DHLPSCALTLSHDELLQIIGEPLVVREALYQVASLLHAN--- 221
Query: 319 DKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRM 378
PS F H + + MH G A +S H
Sbjct: 222 ---PSRFQ--------HLLLSSSSSMHQPGAMLMSAALTSSHR----------------- 253
Query: 379 GSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT 438
N + + + EF + +C A +GGVIGKGG + Q++QETGA+I V + T
Sbjct: 254 -----NYAVRRDIAD-AREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSET 307
Query: 439 DSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TITTRLLVPSSKVGCI 494
D D+ +I S+ E + +S ++A ++LQ + SE K I+TRLLV SS++GC+
Sbjct: 308 DEDDCIIVISSKE-FYEDQSPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGCL 366
Query: 495 LGQGGHVINEMRRRTQADIRVV 516
+G+GG VI+EMR T+A+IR++
Sbjct: 367 IGKGGAVISEMRSVTRANIRIL 388
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 71/199 (35%), Positives = 101/199 (50%), Gaps = 32/199 (16%)
Query: 133 LCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDD 192
+CP+ +GGVIGK G + +R+ET A I V +T E+ II+ SS
Sbjct: 272 ICPAENVGGVIGKGGGFINQIRQETGATIRV-NTSETDEDDCIIVISS------------ 318
Query: 193 DSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVG 252
KE E A +A +++ R E+ G A+D I+ RLLV ++ +G
Sbjct: 319 -------KEFYEDQSPAVNAAIRLQQRCSEK--VGKDAND-----LAISTRLLVSSSQIG 364
Query: 253 CLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
CL+GK G VI +RS T ANIR+L + +P A +EMVQI+G P+ A +AL +V L
Sbjct: 365 CLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGNPDAAMKALTQVILRL 424
Query: 313 HQNPRKDK-----PPSSFP 326
N P+SFP
Sbjct: 425 RANSFDMDHGLVLLPTSFP 443
>gi|13605589|gb|AAK32788.1|AF361620_1 AT5g46190/MCL19_25 [Arabidopsis thaliana]
Length = 640
Score = 220 bits (561), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 234/419 (55%), Gaps = 25/419 (5%)
Query: 111 WSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS 170
S S E+ N VYRILCPS +G VIGK+G ++ +R+ET+A+I V D PG
Sbjct: 27 LSYESEEKKIDNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGC 86
Query: 171 EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMA 230
ERVI I+ S ++ KD ++ + P C+AQ ALLKVHD I+
Sbjct: 87 SERVITIFCSV-----SEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAEN 141
Query: 231 SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---CAMN 287
+ D ++ RLLVP++ ++GK G +I+ +R T AN++V+ D P CAM+
Sbjct: 142 TKIDRDDFR-ECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMD 200
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQ-NPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
D +V ISG+ K+AL+ VS ++++ +PR+ P + Q P+ ++ ++P
Sbjct: 201 FDNIVMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASII--IPSDLS-IYP 257
Query: 347 LGNSSWPARNSSL-HGMPSTPWMG----GYGD---QPSRMGSGSINSCPPGQMGEVSAE- 397
+P+++S HG + ++G GYG+ P + S S G G +E
Sbjct: 258 QAG-LYPSQDSIFQHGANVSSFIGTLPQGYGENAANPVPVFSASALPVVHGFGGSSRSEK 316
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER-VIRASAFEGLWNP 456
++K++CS+ KIG VIGKGG +K ++Q +G+ I V D+ T+ D+ VI +A E +
Sbjct: 317 LAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDL 376
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+S ++A+L LQ K ++ E + +LLV S +GCI+G+ G +I+E+R+RT+ADI +
Sbjct: 377 KSMAVEAVLLLQEKINDEDED-KVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHI 434
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 80/322 (24%), Positives = 149/322 (46%), Gaps = 47/322 (14%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
G+S+ +++C S KIG VIGK G +K +R+ + + I V D+ ++ +I
Sbjct: 310 GSSRSEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVI---- 365
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
+ T++ DD +SM A +A+L + ++I +ED +
Sbjct: 366 --TVTATESPDD-------LKSM-----AVEAVLLLQEKINDED------------EDKV 399
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
+LLV + ++GC++GK G +I +R T A+I + + P CA DE+V+ISG+ +
Sbjct: 400 KMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSN 459
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQ-------------AYGGQNFHSPPAPMADMHPL 347
+ AL ++ L + +D+ S Q + P + M+ + +
Sbjct: 460 VRDALIQIVLRLRDDVLRDRETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQV 519
Query: 348 GNSSW---PARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQM-GEVSAEFSMKIL 403
+ + P SS+ +PS+ + GYG P S NS + G + +M++
Sbjct: 520 ASVDFNRRPETGSSMSMLPSSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVR 579
Query: 404 CSAGKIGGVIGKGGFNVKQLQQ 425
A +G V+G+GG N+ +++
Sbjct: 580 IPANAVGKVMGRGGGNLDNIRR 601
>gi|224067136|ref|XP_002302373.1| predicted protein [Populus trichocarpa]
gi|222844099|gb|EEE81646.1| predicted protein [Populus trichocarpa]
Length = 680
Score = 220 bits (560), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 159/468 (33%), Positives = 248/468 (52%), Gaps = 57/468 (12%)
Query: 107 KKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT 166
K+ N + ++ S PA V+RILCP+ KIG V G+ G ++ +R+ET AK+ V +
Sbjct: 24 KRQNTAGTNSPNQPLKSSPAAVVFRILCPAPKIGTVTGEGGAVISQIRQETGAKVIVEEN 83
Query: 167 IPGSEERVIIIYSS--PTKIAKTQNKDD-DSAAETKKES--------------------- 202
IPG +E++I+I S T+++ Q+K D D A +ES
Sbjct: 84 IPGCDEQIIVITGSDEKTEVSIEQSKKDGDEEANVAEESDNKNDGNEKEEEKEGVPVEDS 143
Query: 203 --MEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGD 260
++ + Q ALL V ++ E D +++N+ ST RLLV ++ VGCLLGK G
Sbjct: 144 GTVKETSSMQKALLLVSGKMFEADPVTDGGDEENNKPSTFILRLLVLSSQVGCLLGKGGS 203
Query: 261 VIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK 320
VI+++ +E+GA IR+ P DRLP C+ +DE+V+I+G+ + ++AL VS L +NP +D
Sbjct: 204 VIKQMSAESGAQIRISPRDRLPICSSVSDELVEITGEIDAVRKALQSVSKQLLENPPRDH 263
Query: 321 PPSSFP----QAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPS 376
SFP + HS P P A + R+S G G +
Sbjct: 264 --DSFPANPSGTSSHSSGHSHPRPEA---------YLQRHS----------FSGRGKPYA 302
Query: 377 RMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 436
S QM V + ++LC ++GGVIGKGG +K L+QETG I V +
Sbjct: 303 VRSRDRHESVIQDQMKPVPDVLTFRLLCHNERVGGVIGKGGTIIKILKQETGCDIKVMEG 362
Query: 437 PTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF--SEKGTITTRLLVPSSKVGCI 494
+DS++RVI S + S DA++++Q + + +++ I RLLV S+++GC+
Sbjct: 363 VSDSEDRVIVISGLAHPDDRISAPQDAVIRVQTRIAMAISNKEKAIIARLLVSSNQIGCL 422
Query: 495 LGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS-SECIVDIRGSSE 541
LG+GG +++EMR+ + A IR++G K Q P+ S SE +V I G E
Sbjct: 423 LGKGGAIMSEMRKSSGAYIRILG---KDQIPNCASESEGVVQINGEFE 467
Score = 118 bits (296), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 69/191 (36%), Positives = 106/191 (55%), Gaps = 28/191 (14%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +R+LC + ++GGVIGK G I+K L++ET I V + + SE+RVI+I
Sbjct: 321 PDVLTFRLLCHNERVGGVIGKGGTIIKILKQETGCDIKVMEGVSDSEDRVIVI------- 373
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
+ + DD +A QDA+++V RI A N+ I ARL
Sbjct: 374 SGLAHPDDRISA------------PQDAVIRVQTRI---------AMAISNKEKAIIARL 412
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LV +N +GCLLGK G ++ +R +GA IR+L D++P CA ++ +VQI+G+ V K A
Sbjct: 413 LVSSNQIGCLLGKGGAIMSEMRKSSGAYIRILGKDQIPNCASESEGVVQINGEFEVVKEA 472
Query: 305 LYEVSTLLHQN 315
L +++T L +
Sbjct: 473 LLQITTRLRHH 483
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T ++VP + V I G+ G + ++R+ + A++ + +P PG+SE ++ I G+
Sbjct: 607 TIEVIVPRTIVPVIYGEDGACLKQIRQ-------ISDAKITINEPKPGASETVIIISGTP 659
Query: 541 EHLISAHGTYQSFMTS 556
E +A Q+F+ S
Sbjct: 660 EQTHAAQSLIQAFVMS 675
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 38/72 (52%), Gaps = 3/72 (4%)
Query: 121 GNSQPA---DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIII 177
G S PA T ++ P + + G+ G +K +R+ + AKIT+ + PG+ E VIII
Sbjct: 596 GVSHPAIITSTTIEVIVPRTIVPVIYGEDGACLKQIRQISDAKITINEPKPGASETVIII 655
Query: 178 YSSPTKIAKTQN 189
+P + Q+
Sbjct: 656 SGTPEQTHAAQS 667
>gi|15237393|ref|NP_199431.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|9757739|dbj|BAB08264.1| unnamed protein product [Arabidopsis thaliana]
gi|14532588|gb|AAK64022.1| unknown protein [Arabidopsis thaliana]
gi|21280941|gb|AAM44907.1| unknown protein [Arabidopsis thaliana]
gi|332007968|gb|AED95351.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 644
Score = 219 bits (558), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 145/419 (34%), Positives = 234/419 (55%), Gaps = 25/419 (5%)
Query: 111 WSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS 170
S S E+ N VYRILCPS +G VIGK+G ++ +R+ET+A+I V D PG
Sbjct: 27 LSYESEEKKIDNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGC 86
Query: 171 EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMA 230
ERVI I+ S ++ KD ++ + P C+AQ ALLKVHD I+
Sbjct: 87 SERVITIFCSV-----SEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAEN 141
Query: 231 SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---CAMN 287
+ D ++ RLLVP++ ++GK G +I+ +R T AN++V+ D P CAM+
Sbjct: 142 TKIDRDDFR-ECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDVSDPSHTCAMD 200
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQ-NPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
D +V ISG+ K+AL+ VS ++++ +PR+ P + Q P+ ++ ++P
Sbjct: 201 FDNIVMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASII--IPSDLS-IYP 257
Query: 347 LGNSSWPARNSSL-HGMPSTPWMG----GYGD---QPSRMGSGSINSCPPGQMGEVSAE- 397
+P+++S HG + ++G GYG+ P + S S G G +E
Sbjct: 258 QAG-LYPSQDSIFQHGANVSSFIGTLPQGYGENAANPVPVFSASALPVVHGFGGSSRSEK 316
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER-VIRASAFEGLWNP 456
++K++CS+ KIG VIGKGG +K ++Q +G+ I V D+ T+ D+ VI +A E +
Sbjct: 317 LAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDL 376
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+S ++A+L LQ K ++ E + +LLV S +GCI+G+ G +I+E+R+RT+ADI +
Sbjct: 377 KSMAVEAVLLLQEKINDEDED-KVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHI 434
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/341 (25%), Positives = 158/341 (46%), Gaps = 47/341 (13%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
G+S+ +++C S KIG VIGK G +K +R+ + + I V D+ ++ +I
Sbjct: 310 GSSRSEKLAIKVICSSSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVI---- 365
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
+ T++ DD +SM A +A+L + ++I +ED +
Sbjct: 366 --TVTATESPDD-------LKSM-----AVEAVLLLQEKINDED------------EDKV 399
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
+LLV + ++GC++GK G +I +R T A+I + + P CA DE+V+ISG+ +
Sbjct: 400 KMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPKCADPNDELVEISGEVSN 459
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQ-------------AYGGQNFHSPPAPMADMHPL 347
+ AL ++ L + +D+ S Q + P + M+ + +
Sbjct: 460 VRDALIQIVLRLRDDVLRDRETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQV 519
Query: 348 GNSSW---PARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQM-GEVSAEFSMKIL 403
+ + P SS+ +PS+ + GYG P S NS + G + +M++
Sbjct: 520 ASVDFNRRPETGSSMSMLPSSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVR 579
Query: 404 CSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 444
A +G V+G+GG N+ +++ +GA I + D+ RV
Sbjct: 580 IPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRV 620
>gi|21553916|gb|AAM62999.1| unknown [Arabidopsis thaliana]
Length = 644
Score = 218 bits (555), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 144/419 (34%), Positives = 234/419 (55%), Gaps = 25/419 (5%)
Query: 111 WSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS 170
S S E+ N VYRILCPS +G VIGK+G ++ +R+ET+A+I V D PG
Sbjct: 27 LSYESEEKKIDNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGC 86
Query: 171 EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMA 230
ERVI I+ S ++ KD ++ + P C+AQ ALLKVHD I+
Sbjct: 87 SERVITIFCSV-----SEKKDIVDIEYSELDYSVPLCSAQAALLKVHDAIVASLATAAEN 141
Query: 231 SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---CAMN 287
+ D ++ RLLVP++ ++GK G +I+ +R T AN++V+ D P CAM+
Sbjct: 142 TKIDRDDFR-ECRLLVPSSQCSIVIGKSGSIIKNIRGRTRANVKVVSKDASDPSHTCAMD 200
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQ-NPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
D +V ISG+ K+AL+ VS ++++ +PR+ P + Q P+ ++ ++P
Sbjct: 201 FDNIVMISGETESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASII--IPSDLS-IYP 257
Query: 347 LGNSSWPARNSSL-HGMPSTPWMG----GYGD---QPSRMGSGSINSCPPGQMGEVSAE- 397
+P+++S HG + ++G GYG+ P + S S G G +E
Sbjct: 258 QAG-LYPSQDSIFQHGANVSSFIGTLPQGYGENAANPLPVFSASALPVVHGFGGSSRSEK 316
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER-VIRASAFEGLWNP 456
++K++C++ KIG VIGKGG +K ++Q +G+ I V D+ T+ D+ VI +A E +
Sbjct: 317 LAIKVICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVITVTATESPDDL 376
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+S ++A+L LQ K ++ E + +LLV S +GCI+G+ G +I+E+R+RT+ADI +
Sbjct: 377 KSMAVEAVLLLQEKINDEDED-KVKMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHI 434
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/341 (24%), Positives = 157/341 (46%), Gaps = 47/341 (13%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
G+S+ +++C S KIG VIGK G +K +R+ + + I V D+ ++ +I
Sbjct: 310 GSSRSEKLAIKVICASSKIGRVIGKGGLTIKGIRQASGSHIEVNDSRTNHDDDCVI---- 365
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
+ T++ DD +SM A +A+L + ++I +ED +
Sbjct: 366 --TVTATESPDD-------LKSM-----AVEAVLLLQEKINDED------------EDKV 399
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
+LLV + ++GC++GK G +I +R T A+I + + P A DE+V+ISG+ +
Sbjct: 400 KMQLLVSSKVIGCIIGKSGSIISEIRKRTKADIHISKGNNTPKSADPNDELVEISGEVSN 459
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQ-------------AYGGQNFHSPPAPMADMHPL 347
+ AL ++ L + +D+ S Q + P + M+ + +
Sbjct: 460 VRDALIQIVLRLRDDVLRDRETGSRNQPPARSENNNFFSSSSSNTGLALPQSFMSSVPQV 519
Query: 348 GNSSW---PARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQM-GEVSAEFSMKIL 403
+ + P SS+ +PS+ + GYG P S NS + G + +M++
Sbjct: 520 ASVDFDRRPETGSSMSMLPSSGGIYGYGSFPVGNTSYGSNSSYSSNLYGGLPQSTTMEVR 579
Query: 404 CSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 444
A +G V+G+GG N+ +++ +GA I + D+ RV
Sbjct: 580 IPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRV 620
>gi|297791069|ref|XP_002863419.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297309254|gb|EFH39678.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 643
Score = 218 bits (555), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 145/413 (35%), Positives = 233/413 (56%), Gaps = 25/413 (6%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVII 176
E+ N VYRILCPS +G VIGK+G ++ +R+ET+A+I V D PG ERVI
Sbjct: 32 EEKTDNKDDLVVVYRILCPSGVMGSVIGKSGKVINLIRQETRARIKVVDPFPGCSERVIT 91
Query: 177 IYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE 236
I+ S T+ KD ++ P C+AQDALLKVHD I+ L + +
Sbjct: 92 IFCSV-----TEKKDIIDIEHSELNYSIPLCSAQDALLKVHDAIVAS-LATAAENTKIDR 145
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---CAMNTDEMVQ 293
+ RLLVP++ ++GK G +I+++RS T AN++V+ D P CAM+ D +V
Sbjct: 146 DDIRECRLLVPSSQCSNVIGKSGSIIKKIRSRTRANVKVVSKDVSDPSHTCAMDFDNIVL 205
Query: 294 ISGKPNVAKRALYEVSTLLHQ-NPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSW 352
ISG+ K+AL+ VS ++++ +PR+ P + Q P+ ++ ++P G +
Sbjct: 206 ISGESESVKKALFAVSAIMYKVSPREQIPLDTTVQEVPASII--IPSDLS-IYPQGG-LY 261
Query: 353 PARNSSL-HGMPSTPWMG----GYGD---QPSRMGSGSINSCPPGQMGEVSAE-FSMKIL 403
P ++ HG + ++G GYG+ P + S S G G +E +K++
Sbjct: 262 PNQDPIFQHGANVSSFIGTLPQGYGESAANPMPVFSASALPVVHGFGGSSKSEKLVIKVI 321
Query: 404 CSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER-VIRASAFEGLWNPRSQTID 462
CS+ KIG VIGKGG +K ++Q +G+ I V D+ + D+ VI +A E + +S ++
Sbjct: 322 CSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVITVTATESPDDLKSMAVE 381
Query: 463 AILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
A+L LQ K ++ E+ + +LLVPS +GCI+G+ G +I+E+R+RT+A+I +
Sbjct: 382 AVLLLQEKINDEDEE-KVKMQLLVPSKVIGCIIGKSGSIISEIRKRTKANIHI 433
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 89/341 (26%), Positives = 163/341 (47%), Gaps = 47/341 (13%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
G+S+ V +++C S KIG VIGK G+ +K +R+ + + I V D+ ++ +I
Sbjct: 309 GSSKSEKLVIKVICSSSKIGRVIGKGGSTIKGIRQASGSHIEVNDSRANHDDDCVI---- 364
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
+ T++ DD +SM A +A+L + ++I +D+D E +
Sbjct: 365 --TVTATESPDD-------LKSM-----AVEAVLLLQEKI----------NDEDEEK--V 398
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
+LLVP+ ++GC++GK G +I +R T ANI + + P CA DE+V+ISG+ +
Sbjct: 399 KMQLLVPSKVIGCIIGKSGSIISEIRKRTKANIHISKGNNKPKCADPNDELVEISGEVSD 458
Query: 301 AKRALYEVSTLLHQNPRKDK-------PPSS------FPQAYGGQNFHSPPAPMADMHPL 347
+ AL ++ L + +D+ PP+ F P + M+ + +
Sbjct: 459 VRDALIQIVLRLRDDVLRDREIGSRNQPPARSENNNFFSSGSSNTGLALPSSFMSSVPQV 518
Query: 348 GNSSW---PARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQM-GEVSAEFSMKIL 403
+ + P SS+ +PS+ + GYG P S S + G + +M++
Sbjct: 519 ASVDFDRRPETGSSMSMLPSSGGLYGYGSFPVGNNSYGSKSSYSSNLYGGLPQSTTMEVR 578
Query: 404 CSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 444
A +G V+G+GG N+ +++ +GA I + D+ R+
Sbjct: 579 IPANAVGKVMGRGGGNLDNIRRISGAMIEISDSKNSHGGRI 619
>gi|224076902|ref|XP_002305041.1| predicted protein [Populus trichocarpa]
gi|222848005|gb|EEE85552.1| predicted protein [Populus trichocarpa]
Length = 623
Score = 214 bits (544), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 143/421 (33%), Positives = 222/421 (52%), Gaps = 32/421 (7%)
Query: 109 GNWSNSSR-EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI 167
G+ +N R + + G VYRILCP IG VIGK+G ++ S+R E++A++ V D
Sbjct: 16 GDTNNQKRHKDNKGTDNDELVVYRILCPDEVIGSVIGKSGKVINSIRNESRARVKVVDPF 75
Query: 168 PGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
PG+ RVI IY + + DD A +P C AQDALLKVH I +
Sbjct: 76 PGAMYRVITIYCNVKEKGDADVDDDFHQA-------DPLCPAQDALLKVHAAI--SNAVA 126
Query: 228 GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---C 284
+ D ++LVP + ++GK G I++LRS+T ANI++ D P C
Sbjct: 127 ALGDSDKRCRDKKECQILVPTSQSANIIGKAGATIKKLRSKTRANIKITAKDASDPTHSC 186
Query: 285 AMNTDEMVQISGKPNVAKRALYEVSTLLHQ-NPRKDKP-PSSFPQA------YGGQNFHS 336
AM+ D + I+G+ K+AL+ VS ++++ +P+++ P ++ P+A +
Sbjct: 187 AMDFDNFLLITGESEAVKKALFAVSAIMYKFSPKEEIPLETTVPEAPPSIIISSDVPIYQ 246
Query: 337 PPAPMADMHPLGNS-SWPARNSSLHGMPSTPWMGGYGDQPSR--MGSGSINSCPPGQMGE 393
P + P+ +S S P + G P GYGD S + S ++ P G
Sbjct: 247 PGGFYPNADPIVSSRSVP----PILGATHIPEFQGYGDMRSSWPIYSSTVPVVP--SFGN 300
Query: 394 VS-AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG 452
S +E +++LC KIG VIGKGG +K ++Q +GA I V+D D DE +I A E
Sbjct: 301 TSRSELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVIATES 360
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ +S ++AIL LQ K ++ + + R LVPS +GCI+G+ G ++NE+R+RT AD
Sbjct: 361 PDDLKSMAVEAILLLQGKIND-EDNDIVGIRFLVPSKVIGCIIGKSGAIVNEIRKRTNAD 419
Query: 513 I 513
+
Sbjct: 420 V 420
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 92/336 (27%), Positives = 165/336 (49%), Gaps = 43/336 (12%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIY 178
SFGN+ ++ + R+LCP KIG VIGK G+ +KS+R+ + A+I V DT +E +I +
Sbjct: 297 SFGNTSRSELIIRLLCPFDKIGRVIGKGGSTIKSIRQVSGARIEVDDTKADRDECIITVI 356
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+ T++ DD +SM A +A+L + +I +ED N
Sbjct: 357 A-------TESPDD-------LKSM-----AVEAILLLQGKINDED------------ND 385
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+ R LVP+ ++GC++GK G ++ +R T A++ + D+L CA + DE+V+++G+
Sbjct: 386 IVGIRFLVPSKVIGCIIGKSGAIVNEIRKRTNADVCISKVDKL-KCADSNDELVEVAGEV 444
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFH------SPPAPMADMHPLGNSSW 352
+ AL ++ L + K+K + G + + S P+ + + P+ +
Sbjct: 445 GSVRDALVQIVLRLRDDVLKEK-DGGLNSSVGTDSVYPVHAGISIPSILPSVPPVAPMGY 503
Query: 353 PARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF----SMKILCSAGK 408
R S G+ YG MG S S + ++ ++++L A
Sbjct: 504 DQRAESGSGLGLFSSSSLYGYGSLPMGENSYGSLASYSLSKLYEGLPPPSTLEMLVPANA 563
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 444
+G VIGKGG N+ +++ +GA I + DA + +R+
Sbjct: 564 VGKVIGKGGANIANIRKISGAMIEISDAKSARGDRI 599
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 75/183 (40%), Gaps = 36/183 (19%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-------------------EDAPTDSD 441
+ILC IG VIGK G + ++ E+ A + V E D D
Sbjct: 39 RILCPDEVIGSVIGKSGKVINSIRNESRARVKVVDPFPGAMYRVITIYCNVKEKGDADVD 98
Query: 442 ERVIRAS----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQ 497
+ +A A + L + +A+ L + +K ++LVP+S+ I+G+
Sbjct: 99 DDFHQADPLCPAQDALLKVHAAISNAVAALGDSDKRCRDKKE--CQILVPTSQSANIIGK 156
Query: 498 GGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVD------IRGSSEHLISAHGTYQ 551
G I ++R +T+A+I++ +D + C +D I G SE + A
Sbjct: 157 AGATIKKLRSKTRANIKITA-----KDASDPTHSCAMDFDNFLLITGESEAVKKALFAVS 211
Query: 552 SFM 554
+ M
Sbjct: 212 AIM 214
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query: 454 WNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
W S T+ + N + + + RLL P K+G ++G+GG I +R
Sbjct: 285 WPIYSSTVPVVPSFGN-----TSRSELIIRLLCPFDKIGRVIGKGGSTIKSIR------- 332
Query: 514 RVVGARVKLQDPHPGSSECIVDI 536
+V GAR+++ D ECI+ +
Sbjct: 333 QVSGARIEVDDTKADRDECIITV 355
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 9/69 (13%)
Query: 468 QNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP 527
NK ++ E + R+L P +G ++G+ G VIN +R ++ ARVK+ DP P
Sbjct: 26 DNKGTDNDE--LVVYRILCPDEVIGSVIGKSGKVINSIRNESR-------ARVKVVDPFP 76
Query: 528 GSSECIVDI 536
G+ ++ I
Sbjct: 77 GAMYRVITI 85
>gi|225464083|ref|XP_002269250.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 648
Score = 213 bits (542), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 145/405 (35%), Positives = 220/405 (54%), Gaps = 45/405 (11%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+LC + +IGGVIGK+G IVK L+ +T A+I V D+ S+ RVI++ + P + +
Sbjct: 53 FRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIA-PASVNRRI- 110
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
A + E +E AAQ+A+L+V +RI+E D ++ RLL +
Sbjct: 111 -----ALQGSSEEVE-ASAAQEAVLRVFERILEV----AAVVDGVPPGGVVSCRLLAETS 160
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VG ++GK G V++++R E+G+ I+VL A++LP CA +TDEMV+I G K+AL VS
Sbjct: 161 QVGSVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEIEGDVLAVKKALVAVS 220
Query: 310 TLLHQNPRKDK-------PPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
L P DK P PQ S P P D+ + R S L +
Sbjct: 221 RRLQDCPNVDKTKLIGGRPLEVVPQ-------QSLPDPRVDL-------FQQRGSVLPPI 266
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS G +P + + I++ P + E KILCS ++GGVIGKGG VK
Sbjct: 267 PSNTISYASGSRPLSINTERISTLDPKTSQQ---EVIFKILCSNDRVGGVIGKGGTIVKA 323
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-EKGT-- 479
LQ E GASI V + DER+I +A E + S + ++ + N++ E EKG
Sbjct: 324 LQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVILVFNRSIEAGIEKGLDS 383
Query: 480 ------ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGA 518
++ RL+VPS++VGC++G+GG +I+EMR+ + A IR++G+
Sbjct: 384 GSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRIIGS 428
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 171/350 (48%), Gaps = 61/350 (17%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ +++ILC + ++GGVIGK G IVK+L+ E A I+V + +ER+I I
Sbjct: 298 EVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITI--------- 348
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+A+E + P AQ+ ++ V +R IE + G+ D ++ S ++ARL+V
Sbjct: 349 -------TASENPESRYSP---AQNGVILVFNRSIEAGIEKGL--DSGSKGSPVSARLVV 396
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+N VGCL+GK G +I +R +GA IR++ +D++P CA D++VQISG+ + LY
Sbjct: 397 PSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLY 456
Query: 307 EVSTLLHQNPRKDKPPSSFP-QAYGGQNFHSPPAPMADMHPLGNSSWPAR---NSSLHGM 362
++ L N FP + G S A M ++ P G PA +SS+
Sbjct: 457 HITGRLRDN--------LFPSKTLNGAGIRSSSA-MNEISPYGRVRDPASFGLHSSVGVS 507
Query: 363 PS-------TPWMGGYG-----DQPS--RMG-SGSINSCPP-----------GQMGEVSA 396
PS T M G D P+ R+ S ++ P G +
Sbjct: 508 PSFSRHTTLTQSMDHLGLSHSLDHPTSPRLWPSQTVTGVNPRNIKGGIELGSGSKSAIIT 567
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERVI 445
+++I+ IG V G+ G N+ +L++ +GA + + E P SD VI
Sbjct: 568 NTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVI 617
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 81/142 (57%), Gaps = 18/142 (12%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI--------- 445
+ + ++LC A +IGGVIGK G VKQLQ +TGA I VED+P+ SD RVI
Sbjct: 48 AGHVAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVN 107
Query: 446 RASAFEGLWN--PRSQTIDAILQLQNKTSEFSE-------KGTITTRLLVPSSKVGCILG 496
R A +G S +A+L++ + E + G ++ RLL +S+VG ++G
Sbjct: 108 RRIALQGSSEEVEASAAQEAVLRVFERILEVAAVVDGVPPGGVVSCRLLAETSQVGSVIG 167
Query: 497 QGGHVINEMRRRTQADIRVVGA 518
+GG V+ ++RR + + I+V+ A
Sbjct: 168 KGGKVVEKIRRESGSKIKVLTA 189
Score = 45.8 bits (107), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T +++P + +G + G+ G+ + +R+ + GA+V L +P PG+S+ IV I G+
Sbjct: 570 TVEIVIPENVIGSVYGENGNNLARLRK-------ISGAKVTLHEPRPGTSDRIVIISGTP 622
Query: 541 EHLISAHGTYQSFMTSG 557
+ +A Q+F+ +G
Sbjct: 623 DETQAAQSLLQAFIHTG 639
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+T I+ P IG V G+ GN + LR+ + AK+T+ + PG+ +R++II +P +
Sbjct: 568 NTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQA 627
Query: 187 TQN 189
Q+
Sbjct: 628 AQS 630
Score = 40.0 bits (92), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 224 DLFGGMASDDDNENSTIT---ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
++ GG+ ++++ IT +++P N++G + G+ G+ + RLR +GA + +
Sbjct: 550 NIKGGIELGSGSKSAIITNTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTL----- 604
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPR 317
P +D +V ISG P+ + A + +H P+
Sbjct: 605 HEPRPGTSDRIVIISGTPDETQAAQSLLQAFIHTGPK 641
>gi|186478468|ref|NP_001117282.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|5080792|gb|AAD39302.1|AC007576_25 Unknown protein [Arabidopsis thaliana]
gi|332190995|gb|AEE29116.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 479
Score = 213 bits (541), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 154/443 (34%), Positives = 236/443 (53%), Gaps = 61/443 (13%)
Query: 82 MDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGG 141
M ++ RN KR N Q + G G K+ N + + + + DTVYR LCP +K G
Sbjct: 1 MASTLRNIHGKRSNLQSEFTGNGGSKRRNLHDETDQNVIASE---DTVYRYLCPVKKTGS 57
Query: 142 VIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 201
+IGK G I K +R ET++ + + + +PG EERV+ +YS+ ++ + DD
Sbjct: 58 IIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEEL---NHFGDDG------- 107
Query: 202 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD--NENSTITARLLVPNNMVGCLLGKRG 259
E C A DAL KVHD ++ + DD+ E T+T R+LVP++ +GC++GK G
Sbjct: 108 --ELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRMLVPSDQIGCVIGKGG 165
Query: 260 DVIQRLRSETGANIRVLPADRLPPCAMNT--DEMVQISGKPNVAKRALYEVSTLLHQNPR 317
VIQ LR++T A IRV+ D LP CA+ DE++ I G+P V + ALY+V++LLH NP
Sbjct: 166 QVIQNLRNDTNAQIRVIK-DHLPACALTLSHDELLLIIGEPLVVREALYQVASLLHDNPS 224
Query: 318 KDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSR 377
+ + + + H P A + S + + R
Sbjct: 225 RFQHLLLSSSS---SSMHQPGAMLM---------------------SAALTSSHRNYAVR 260
Query: 378 MGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP 437
+ EF + +C A +GGVIGKGG + Q++QETGA+I V +
Sbjct: 261 RDIAD------------AREFCVCFICPAENVGGVIGKGGGFINQIRQETGATIRVNTSE 308
Query: 438 TDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TITTRLLVPSSKVGC 493
TD D+ +I S+ E + +S ++A ++LQ + SE K I+TRLLV SS++GC
Sbjct: 309 TDDDDCIIFISSKE-FYEDQSPAVNAAIRLQQRCSEKVGKDANDLAISTRLLVSSSQIGC 367
Query: 494 ILGQGGHVINEMRRRTQADIRVV 516
++G+GG VI+EMR T+A+IR++
Sbjct: 368 LIGKGGAVISEMRSVTRANIRIL 390
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 100/199 (50%), Gaps = 32/199 (16%)
Query: 133 LCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDD 192
+CP+ +GGVIGK G + +R+ET A I V +T ++ II SS
Sbjct: 274 ICPAENVGGVIGKGGGFINQIRQETGATIRV-NTSETDDDDCIIFISS------------ 320
Query: 193 DSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVG 252
KE E A +A +++ R E+ G A+D I+ RLLV ++ +G
Sbjct: 321 -------KEFYEDQSPAVNAAIRLQQRCSEK--VGKDAND-----LAISTRLLVSSSQIG 366
Query: 253 CLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
CL+GK G VI +RS T ANIR+L + +P A +EMVQI+G P+ A +AL +V L
Sbjct: 367 CLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRL 426
Query: 313 HQNPRKDK-----PPSSFP 326
N P+SFP
Sbjct: 427 RANSFDMDHGLVLLPTSFP 445
>gi|357447239|ref|XP_003593895.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|357447243|ref|XP_003593897.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482943|gb|AES64146.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482945|gb|AES64148.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 631
Score = 212 bits (540), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 146/449 (32%), Positives = 226/449 (50%), Gaps = 83/449 (18%)
Query: 110 NWSNSSREQSFGNSQPAD----TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVAD 165
NW N ++++ + D YRILCP+ IG VIGK G ++ S+R+E++AK+ V D
Sbjct: 20 NWDNKNQKRRVNDRDERDKGELIAYRILCPNEVIGSVIGKNGKVINSIRQESRAKVKVVD 79
Query: 166 TIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL 225
PG++ RVI I+ +NK++ + +P CAAQDAL+KVH I
Sbjct: 80 PFPGAKHRVITIF------CHVKNKEEIEIEDEFDNE-KPLCAAQDALIKVHSAISNSIE 132
Query: 226 FGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP-- 283
G S+ +N ++LVP++ L+GK G I++LR +T NI+V+P D P
Sbjct: 133 TAG-DSEKKRKNKD-ECQILVPSSQSAILIGKAGATIKQLRVKTRTNIKVVPKDAADPEH 190
Query: 284 -CAMNTDEMVQISGKPNVAKRALYEVSTLLHQ-NPRKDKP-------------------- 321
CAM D V + G+ KRAL+ VST++++ +P++D P
Sbjct: 191 SCAMEFDNFVLV-GESEAVKRALFAVSTIMYKFSPKEDIPLDTTVPETPHSIIIPSELPI 249
Query: 322 ---------------PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTP 366
P SFPQ G AD GN +WP +S L P
Sbjct: 250 YPPGGLYPASDPIVQPRSFPQLIGATTMQDLHGGYADT---GN-TWPLYSSPL------P 299
Query: 367 WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQE 426
+ G S E +++LC + KIG +IGKGG +K+++Q
Sbjct: 300 VVSSLG-------------------ASQSEELIVRMLCPSDKIGQLIGKGGGTIKRMRQA 340
Query: 427 TGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLV 486
+GA I V+D+ DE +I +A E + +S ++A+L LQ K ++ + ++ RLLV
Sbjct: 341 SGARIEVDDSKARHDECLITITATESTSDLKSVAVEAVLLLQEKIND-EDDAPVSIRLLV 399
Query: 487 PSSKVGCILGQGGHVINEMRRRTQADIRV 515
PS +GCI+G+ G +INE+R+RT+ADI++
Sbjct: 400 PSKVIGCIIGRSGAIINEIRKRTKADIQI 428
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/340 (25%), Positives = 170/340 (50%), Gaps = 49/340 (14%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIY 178
S G SQ + + R+LCPS KIG +IGK G +K +R+ + A+I V D+ +E +I I
Sbjct: 303 SLGASQSEELIVRMLCPSDKIGQLIGKGGGTIKRMRQASGARIEVDDSKARHDECLITIT 362
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
++ +S ++ K ++E A+L + ++I +ED ++
Sbjct: 363 AT------------ESTSDLKSVAVE-------AVLLLQEKINDED------------DA 391
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
++ RLLVP+ ++GC++G+ G +I +R T A+I++ +++ P A + DE+V++ G+
Sbjct: 392 PVSIRLLVPSKVIGCIIGRSGAIINEIRKRTKADIQISRSNK-PKYADDNDELVEVVGEV 450
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS 358
+ + AL ++ L ++ K+K + G ++ ++ + ++ P SS PA +
Sbjct: 451 DCVRDALIQIVLRLREDVLKNKD-IDHNRHIGSESLYASSSVLS--APPMLSSIPATAPA 507
Query: 359 LHGMPSTPWMGGYGDQPSRMGSG----SINSCPPGQMGEVSAEF----------SMKILC 404
L T G G SR G S+ G M + +++++
Sbjct: 508 LAYDQRTGSGTGLGMHSSRSHYGYDSYSMEDNGYGSMSSYATNLYEGHRLPPLSTLEMVV 567
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 444
A +G V+GKGG N+ +++ +GA++ + ++ + +RV
Sbjct: 568 PANAVGKVMGKGGANLANIRKISGATVEISESKSYRGDRV 607
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 37/68 (54%), Gaps = 7/68 (10%)
Query: 469 NKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPG 528
N E + I R+L P+ +G ++G+ G VIN +R+ ++A ++VV DP PG
Sbjct: 31 NDRDERDKGELIAYRILCPNEVIGSVIGKNGKVINSIRQESRAKVKVV-------DPFPG 83
Query: 529 SSECIVDI 536
+ ++ I
Sbjct: 84 AKHRVITI 91
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 34/62 (54%), Gaps = 7/62 (11%)
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIV 534
S+ + R+L PS K+G ++G+GG I MR+ + GAR+++ D EC++
Sbjct: 307 SQSEELIVRMLCPSDKIGQLIGKGGGTIKRMRQAS-------GARIEVDDSKARHDECLI 359
Query: 535 DI 536
I
Sbjct: 360 TI 361
>gi|356518382|ref|XP_003527858.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 676
Score = 211 bits (536), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 148/465 (31%), Positives = 234/465 (50%), Gaps = 61/465 (13%)
Query: 92 KRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVK 151
KRPN +G G +S S G S P V+R+LC + +IGGVIGK G+I+
Sbjct: 5 KRPNAGPNGRGKRRRSSGGFS------SLGVS-PGSVVFRLLCHASRIGGVIGKGGSIIS 57
Query: 152 SLREETQAKITVADTIPGSEERVIIIYSSP-------TKIAKTQNKDDDSAAETKK---- 200
+R+ET K+ + + +PG +ERVI I S T+ K N +DD +E K
Sbjct: 58 QIRQETGVKLRIEEAVPGCDERVITISGSEKETEEDNTEQGKEVNDNDDGGSEGKDREEK 117
Query: 201 --------------------ESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
+S + + A A+ V +R++E ++ N+ S+
Sbjct: 118 DDGDGNEDKREKDAVPVEDSKSEKGNSAIWKAISLVFERMVEGVEETTEGDEESNKPSSF 177
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
RLL+ VGC+LGK G VI+R+ +E+GA IR+LP D+LP CA +DE+VQISG V
Sbjct: 178 FLRLLILTAQVGCVLGKGGSVIKRMAAESGAQIRILPKDKLPACASASDEIVQISGSVEV 237
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
++AL VS L +NP +D S G + HS +P N S
Sbjct: 238 VRKALQSVSQQLLENPPRDH--DSLSAKSTGPSSHS------------FGQFPPHNRSFS 283
Query: 361 GMPSTPWMGGYGDQPSRMGSGSI-----NSCPPGQMGEVSAEFSMKILCSAGKIGGVIGK 415
P+ G D + + + + G+M + + ++LC A ++G +IGK
Sbjct: 284 AQ-GEPFASGPHDISAFHSAAPLIPKFHEAAIHGRMRPLQEMLTFRLLCPAERVGNIIGK 342
Query: 416 GGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSE-- 473
GG +K +QQET + I V +AP DS++ VI S + S +A+ ++Q + ++
Sbjct: 343 GGAIIKTVQQETASEIKVLEAPPDSEDCVIVISGPAHPEDRISPVQEAVFRVQTRIAKPI 402
Query: 474 -FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
++ + R LV S+++GC+LG+GG +I EMR+++ A IR++G
Sbjct: 403 PDAKDHIMLARFLVSSTQIGCLLGKGGSIITEMRKKSGAHIRILG 447
Score = 113 bits (283), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/265 (29%), Positives = 135/265 (50%), Gaps = 55/265 (20%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+LCP+ ++G +IGK G I+K++++ET ++I V + P SE+ VI+I
Sbjct: 327 FRLLCPAERVGNIIGKGGAIIKTVQQETASEIKVLEAPPDSEDCVIVI------------ 374
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
S ++ + P Q+A+ +V RI + D ++ + AR LV +
Sbjct: 375 ----SGPAHPEDRISP---VQEAVFRVQTRIAK--------PIPDAKDHIMLARFLVSST 419
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
+GCLLGK G +I +R ++GA+IR+L D++P CA +E++Q++G+ AL +++
Sbjct: 420 QIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHDALLQIT 479
Query: 310 TLLHQNPRKDKPPSS--------------FPQAYGGQNFHSPPAPMADM-HPLGNSSWPA 354
T L + +D PS FP Y G+ SPP +D+ HP ++ +P
Sbjct: 480 TRLKHHCFRDSYPSVNYPSNSPFLDQLPPFP-PYLGRRGLSPPRMYSDLGHPHPHAGFPL 538
Query: 355 RN-----SSLH--GMP-----STPW 367
+ +S+H G+P PW
Sbjct: 539 DDRPPFLNSIHRPGLPPHISERKPW 563
Score = 42.7 bits (99), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
+T RLL P+ +VG I+G+GG +I +++ T ++I+V+ A P S +C++ I G
Sbjct: 325 LTFRLLCPAERVGNIIGKGGAIIKTVQQETASEIKVLEA-------PPDSEDCVIVISG 376
>gi|218192926|gb|EEC75353.1| hypothetical protein OsI_11789 [Oryza sativa Indica Group]
Length = 478
Score = 209 bits (531), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 134/368 (36%), Positives = 220/368 (59%), Gaps = 35/368 (9%)
Query: 153 LREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDA 212
+R +TQAKI + +++ G +ERVI I+SS + + +D C AQDA
Sbjct: 1 MRADTQAKIRIGESVSGCDERVITIFSSSRETNTLVDAEDKV------------CPAQDA 48
Query: 213 LLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
L +VH+++ +D G SD+ + +T RLLVP++ +GC++GK G +IQ +RS+TGA+
Sbjct: 49 LFRVHEKLSIDDDIGNEESDEGL--AQVTVRLLVPSDQIGCIIGKGGHIIQGIRSDTGAH 106
Query: 273 IRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQ 332
IRVL + LP CA++ DE++QISG V ++AL +VS+ LH NP + +
Sbjct: 107 IRVLSNENLPACAISGDELLQISGDSTVVRKALLQVSSRLHDNPSRSQ------------ 154
Query: 333 NFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMG 392
H + M +P+G+ + + + G+ TP + YG + + P +
Sbjct: 155 --HLLASSMTQPYPVGSHLGSSSTAPVVGI--TPLISSYGGYKGDVAGDWPSIYQPRREE 210
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG 452
+ EFS+++LC+A +GGVIGKGG +KQ++QE+GA I V+ + T+ D+ +I SA E
Sbjct: 211 SSAKEFSLRLLCAASNVGGVIGKGGGIIKQIRQESGAFIKVDSSNTE-DDCIITVSAKEF 269
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKG----TITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+P S TI+A + LQ + SE ++ + TTRLLV +S++GC++G+GG +I E+RR
Sbjct: 270 FEDPVSPTINAAVHLQPRCSEKTDPESAIPSYTTRLLVSTSRIGCLIGKGGSIITEIRRT 329
Query: 509 TQADIRVV 516
++A+IR++
Sbjct: 330 SRANIRIL 337
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 183 KIAKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
K+ + +DD + KE E P +A + + R E+ +D ++ + T
Sbjct: 250 KVDSSNTEDDCIITVSAKEFFEDPVSPTINAAVHLQPRCSEK-------TDPESAIPSYT 302
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
RLLV + +GCL+GK G +I +R + ANIR+L + +P A +EMVQISG +V
Sbjct: 303 TRLLVSTSRIGCLIGKGGSIITEIRRTSRANIRILSKENVPKVAAEDEEMVQISGDLDVV 362
Query: 302 KRALYEVSTLLHQN 315
+ AL +++T L N
Sbjct: 363 RHALLQITTRLKAN 376
>gi|297804330|ref|XP_002870049.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297315885|gb|EFH46308.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 605
Score = 206 bits (525), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 158/453 (34%), Positives = 234/453 (51%), Gaps = 60/453 (13%)
Query: 91 KKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNS-----QPADTVYRILCPSRKIGGVIGK 145
KKR NQ + N SN ++++ N+ + +YRILCP +GGVIGK
Sbjct: 5 KKRKQNQ---------RNNNESNRNQKRRISNNGEKINRDELVIYRILCPIDVVGGVIGK 55
Query: 146 AGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEP 205
+G ++ ++R T+AKI V D + G +RVI IY S + K + + D +ET EP
Sbjct: 56 SGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKE--KKEEEIDFMKSET-----EP 108
Query: 206 HCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRL 265
C AQDALLKV+D I+ D DD + LLVP++ L+GK G+ I+R+
Sbjct: 109 LCCAQDALLKVYDAIVASDEENIKIDRDDKKECL----LLVPSSQSFSLIGKAGENIKRI 164
Query: 266 RSETGANIRVLPADRLPP---CAMNTDEMVQISGKPNVAKRALYEVSTLLHQ-NPRKDKP 321
RS T A+++V+ D P CAM+ D +V ISG+P K+AL+ VS +L++ NPR+ P
Sbjct: 165 RSTTRASVKVVSKDVSDPSHVCAMDYDNIVVISGEPESVKKALFAVSAILYKINPREHIP 224
Query: 322 PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWP---------------ARNSSLHGMPSTP 366
S GQ+ PA + L NS +P A S S
Sbjct: 225 LDS-----TGQDV---PASIIVSSDLSNSVYPQTGFYSNQDHILQQRAGVPSYFNALSVS 276
Query: 367 WMGGYGDQPSRMGSGSINSCPP--GQMGEV-SAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
GY + + +S P G G S E +K+LC I VIGKGG +K++
Sbjct: 277 NFQGYAETAANPMPVFASSLPVTHGFGGSSRSKELVLKVLCPLSNITRVIGKGGSTIKRI 336
Query: 424 QQETGASIHVEDAPTD--SDERVIRASAFEGLWNPRSQTIDAILQLQNKTS-EFSEKGTI 480
++ +G+ I V D+ T DE VI +A E + +S ++A+L LQ + E +EK +
Sbjct: 337 RETSGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEAVLLLQEYINDEDAEK--V 394
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+L V S +GC++G+ G VINE+R+RT A+I
Sbjct: 395 KMQLFVSSKDIGCVIGKSGSVINEIRKRTNANI 427
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 87/322 (27%), Positives = 152/322 (47%), Gaps = 54/322 (16%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVAD--TIPGSEERVIIIY 178
G+S+ + V ++LCP I VIGK G+ +K +RE + + I V D T G +E VII+
Sbjct: 304 GSSRSKELVLKVLCPLSNITRVIGKGGSTIKRIRETSGSCIEVNDSRTKCGDDECVIIVT 363
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+ T++ DD +SM A +A+L + + I +ED
Sbjct: 364 A-------TESPDD-------MKSM-----AVEAVLLLQEYINDEDA------------E 392
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+ +L V + +GC++GK G VI +R T ANI + + D++V+++G+
Sbjct: 393 KVKMQLFVSSKDIGCVIGKSGSVINEIRKRTNANICISKGKK--------DDLVEVAGEI 444
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS 358
+ + A+ ++ L ++ D+ + + PPA D + L + S A +
Sbjct: 445 SSVRNAIIQIVLRLREDVLGDRDSVAASR--------KPPA-RTDNYSLFSGSSNAGYTL 495
Query: 359 LHGMPSTPWMG--GYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
M S G GYG P+ G S P G + + +++IL A + V+GKG
Sbjct: 496 PSFMSSASSSGFHGYGSFPA--GDNVFGSVSPYSFGRLPSSSALEILIPANAMSKVMGKG 553
Query: 417 GFNVKQLQQETGASIHVEDAPT 438
G N++ +++ +GA I + D+ T
Sbjct: 554 GGNLENIRRISGAMIEISDSKT 575
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI------RASAFEGLW 454
+ILC +GGVIGK G + ++ T A I V D +RVI + E +
Sbjct: 41 RILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKKEEEID 100
Query: 455 NPRSQTI------DAILQLQNKTSEFSEKGTITTR-------LLVPSSKVGCILGQGGHV 501
+S+T DA+L++ + E+ R LLVPSS+ ++G+ G
Sbjct: 101 FMKSETEPLCCAQDALLKVYDAIVASDEENIKIDRDDKKECLLLVPSSQSFSLIGKAGEN 160
Query: 502 INEMRRRTQADIRVVGARV 520
I +R T+A ++VV V
Sbjct: 161 IKRIRSTTRASVKVVSKDV 179
>gi|79317957|ref|NP_001031044.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|222424209|dbj|BAH20063.1| AT1G14170 [Arabidopsis thaliana]
gi|332190994|gb|AEE29115.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 446
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 217/398 (54%), Gaps = 58/398 (14%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
DTVYR LCP +K G +IGK G I K +R ET++ + + + +PG EERV+ +YS+ ++
Sbjct: 10 DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEEL-- 67
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD--NENSTITARL 244
+ DD E C A DAL KVHD ++ + DD+ E T+T R+
Sbjct: 68 -NHFGDDG---------ELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRM 117
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT--DEMVQISGKPNVAK 302
LVP++ +GC++GK G VIQ LR++T A IRV+ D LP CA+ DE++ I G+P V +
Sbjct: 118 LVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIK-DHLPACALTLSHDELLLIIGEPLVVR 176
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
ALY+V++LLH NP + + + + H P A +
Sbjct: 177 EALYQVASLLHDNPSRFQHLLLSSSS---SSMHQPGAMLM-------------------- 213
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
S + + R + EF + +C A +GGVIGKGG + Q
Sbjct: 214 -SAALTSSHRNYAVRRDIAD------------AREFCVCFICPAENVGGVIGKGGGFINQ 260
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG---- 478
++QETGA+I V + TD D+ +I S+ E + +S ++A ++LQ + SE K
Sbjct: 261 IRQETGATIRVNTSETDDDDCIIFISSKE-FYEDQSPAVNAAIRLQQRCSEKVGKDANDL 319
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
I+TRLLV SS++GC++G+GG VI+EMR T+A+IR++
Sbjct: 320 AISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRIL 357
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 100/199 (50%), Gaps = 32/199 (16%)
Query: 133 LCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDD 192
+CP+ +GGVIGK G + +R+ET A I V +T ++ II SS
Sbjct: 241 ICPAENVGGVIGKGGGFINQIRQETGATIRV-NTSETDDDDCIIFISS------------ 287
Query: 193 DSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVG 252
KE E A +A +++ R E+ G A+D I+ RLLV ++ +G
Sbjct: 288 -------KEFYEDQSPAVNAAIRLQQRCSEK--VGKDAND-----LAISTRLLVSSSQIG 333
Query: 253 CLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
CL+GK G VI +RS T ANIR+L + +P A +EMVQI+G P+ A +AL +V L
Sbjct: 334 CLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRL 393
Query: 313 HQNPRKDK-----PPSSFP 326
N P+SFP
Sbjct: 394 RANSFDMDHGLVLLPTSFP 412
>gi|30683629|ref|NP_172869.2| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|30102666|gb|AAP21251.1| At1g14170 [Arabidopsis thaliana]
gi|110743444|dbj|BAE99608.1| hypothetical protein [Arabidopsis thaliana]
gi|332190993|gb|AEE29114.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 454
Score = 204 bits (518), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 143/398 (35%), Positives = 217/398 (54%), Gaps = 58/398 (14%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
DTVYR LCP +K G +IGK G I K +R ET++ + + + +PG EERV+ +YS+ ++
Sbjct: 18 DTVYRYLCPVKKTGSIIGKGGEIAKQIRSETKSNMRINEALPGCEERVVTMYSTNEEL-- 75
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD--NENSTITARL 244
+ DD E C A DAL KVHD ++ + DD+ E T+T R+
Sbjct: 76 -NHFGDDG---------ELVCPALDALFKVHDMVVADADQDDGTDDDNDLGEKQTVTVRM 125
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT--DEMVQISGKPNVAK 302
LVP++ +GC++GK G VIQ LR++T A IRV+ D LP CA+ DE++ I G+P V +
Sbjct: 126 LVPSDQIGCVIGKGGQVIQNLRNDTNAQIRVIK-DHLPACALTLSHDELLLIIGEPLVVR 184
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
ALY+V++LLH NP + + + + H P A +
Sbjct: 185 EALYQVASLLHDNPSRFQHLLLSSSS---SSMHQPGAMLM-------------------- 221
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
S + + R + EF + +C A +GGVIGKGG + Q
Sbjct: 222 -SAALTSSHRNYAVRRDIAD------------AREFCVCFICPAENVGGVIGKGGGFINQ 268
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG---- 478
++QETGA+I V + TD D+ +I S+ E + +S ++A ++LQ + SE K
Sbjct: 269 IRQETGATIRVNTSETDDDDCIIFISSKE-FYEDQSPAVNAAIRLQQRCSEKVGKDANDL 327
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
I+TRLLV SS++GC++G+GG VI+EMR T+A+IR++
Sbjct: 328 AISTRLLVSSSQIGCLIGKGGAVISEMRSVTRANIRIL 365
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 100/199 (50%), Gaps = 32/199 (16%)
Query: 133 LCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDD 192
+CP+ +GGVIGK G + +R+ET A I V +T ++ II SS
Sbjct: 249 ICPAENVGGVIGKGGGFINQIRQETGATIRV-NTSETDDDDCIIFISS------------ 295
Query: 193 DSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVG 252
KE E A +A +++ R E+ G A+D I+ RLLV ++ +G
Sbjct: 296 -------KEFYEDQSPAVNAAIRLQQRCSEK--VGKDAND-----LAISTRLLVSSSQIG 341
Query: 253 CLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
CL+GK G VI +RS T ANIR+L + +P A +EMVQI+G P+ A +AL +V L
Sbjct: 342 CLIGKGGAVISEMRSVTRANIRILQKEDVPKIAREDEEMVQITGSPDAAMKALTQVILRL 401
Query: 313 HQNPRKDK-----PPSSFP 326
N P+SFP
Sbjct: 402 RANSFDMDHGLVLLPTSFP 420
>gi|30684386|ref|NP_849406.1| KH domain-containing protein [Arabidopsis thaliana]
gi|24762211|gb|AAN64172.1| putative KH domain protein [Arabidopsis thaliana]
gi|332658635|gb|AEE84035.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 532
Score = 202 bits (514), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 143/410 (34%), Positives = 215/410 (52%), Gaps = 41/410 (10%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
VYRILCP +GGVIGK+G ++ ++R T+AKI V D + G +RVI IY S + +
Sbjct: 36 VVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCS---VKEK 92
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
Q + TK E+ EP C AQDALLKV+D I+ D ++ D +++ RLLVP
Sbjct: 93 Q----EEIGFTKSEN-EPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNK-ECRLLVP 146
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---CAMNTDEMVQISGKPNVAKRA 304
+ L+GK G+ I+R+R T A+++V+ D P CAM D +V ISG+P K+A
Sbjct: 147 FSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQA 206
Query: 305 LYEVSTLLHQ-NPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWP---------- 353
L+ VS ++++ NPR++ P S Q P A + L NS +P
Sbjct: 207 LFAVSAIMYKINPRENIPLDSTSQ-------DVPAASVIVPSDLSNSVYPQTGFYSNQDH 259
Query: 354 -----ARNSSLHGMPSTPWMGGYGD---QPSRMGSGSINSCPPGQMGEVSAEFSMKILCS 405
A S S GY + P + + S+ S E K+LC
Sbjct: 260 ILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCP 319
Query: 406 AGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD--SDERVIRASAFEGLWNPRSQTIDA 463
I VIGKGG +K++++ +G+ I V D+ T DE VI +A E + +S ++A
Sbjct: 320 LCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEA 379
Query: 464 ILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+L LQ ++ + + +LLV S +GC++G+ G VINE+R+RT A+I
Sbjct: 380 VLLLQEYIND-EDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANI 428
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/260 (28%), Positives = 123/260 (47%), Gaps = 52/260 (20%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVAD--TIPGSEERVIIIY 178
G+S+ + V+++LCP I VIGK G+ +K +RE + + I V D T G +E VII+
Sbjct: 305 GSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVT 364
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+ T++ DD +SM A +A+L + + I +D+D EN
Sbjct: 365 A-------TESPDD-------MKSM-----AVEAVLLLQEYI----------NDEDAEN- 394
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+ +LLV + ++GC++GK G VI +R T ANI + + D++V++SG+
Sbjct: 395 -VKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK--------DDLVEVSGEV 445
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN-- 356
+ + AL ++ L ++ DK + PPA + L SS
Sbjct: 446 SSVRDALIQIVLRLREDVLGDKDSVA---------TRKPPARTDNCSFLSGSSNAGYTLP 496
Query: 357 SSLHGMPSTPWMGGYGDQPS 376
S + M ST GYG P+
Sbjct: 497 SFMSSMASTSGFHGYGSFPA 516
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 105/276 (38%), Gaps = 52/276 (18%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI----------RASAF 450
+ILC +GGVIGK G + ++ T A I V D +RVI F
Sbjct: 39 RILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGF 98
Query: 451 EGLWN-PRSQTIDAILQLQNKTSEFSEKGTITT----------RLLVPSSKVGCILGQGG 499
N P DA+L++ + E+ T RLLVP S+ ++G+ G
Sbjct: 99 TKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAG 158
Query: 500 HVINEMRRRTQADIRVVGARVKLQDP-HPGSSEC--IVDIRGSSEHLISAHGTYQSFMTS 556
I +RRRT+A ++VV V DP H + E +V I G E + A F S
Sbjct: 159 ENIKRIRRRTRASVKVVSKDV--SDPSHVCAMEYDNVVVISGEPESVKQAL-----FAVS 211
Query: 557 GQSMKVQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSS 616
K+ P +NI P S+ +Q P V ++ PQ
Sbjct: 212 AIMYKINPR--ENI-PLDST---------------SQDVPAASVIVPSDLSNSVYPQTGF 253
Query: 617 YPMHTH---QGAGTNPHITPTQSSYYSSSAQQGTYP 649
Y H QGAG + S + A+ P
Sbjct: 254 YSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANP 289
>gi|15236863|ref|NP_193572.1| KH domain-containing protein [Arabidopsis thaliana]
gi|15214341|sp|P58223.1|Y4837_ARATH RecName: Full=KH domain-containing protein At4g18375
gi|22136632|gb|AAM91635.1| unknown protein [Arabidopsis thaliana]
gi|332658636|gb|AEE84036.1| KH domain-containing protein [Arabidopsis thaliana]
Length = 606
Score = 201 bits (512), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 214/410 (52%), Gaps = 41/410 (10%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
VYRILCP +GGVIGK+G ++ ++R T+AKI V D + G +RVI IY S
Sbjct: 36 VVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSV------ 89
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
+ + TK E+ EP C AQDALLKV+D I+ D ++ D +++ RLLVP
Sbjct: 90 -KEKQEEIGFTKSEN-EPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNK-ECRLLVP 146
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---CAMNTDEMVQISGKPNVAKRA 304
+ L+GK G+ I+R+R T A+++V+ D P CAM D +V ISG+P K+A
Sbjct: 147 FSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQA 206
Query: 305 LYEVSTLLHQ-NPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWP---------- 353
L+ VS ++++ NPR++ P S Q P A + L NS +P
Sbjct: 207 LFAVSAIMYKINPRENIPLDSTSQDV-------PAASVIVPSDLSNSVYPQTGFYSNQDH 259
Query: 354 -----ARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPP--GQMGEV-SAEFSMKILCS 405
A S S GY + + +S P G G S E K+LC
Sbjct: 260 ILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCP 319
Query: 406 AGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD--SDERVIRASAFEGLWNPRSQTIDA 463
I VIGKGG +K++++ +G+ I V D+ T DE VI +A E + +S ++A
Sbjct: 320 LCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEA 379
Query: 464 ILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+L LQ ++ + + +LLV S +GC++G+ G VINE+R+RT A+I
Sbjct: 380 VLLLQEYIND-EDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANI 428
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 157/322 (48%), Gaps = 54/322 (16%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVAD--TIPGSEERVIIIY 178
G+S+ + V+++LCP I VIGK G+ +K +RE + + I V D T G +E VII+
Sbjct: 305 GSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVT 364
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+ T++ DD +SM A +A+L + + I +D+D EN
Sbjct: 365 A-------TESPDD-------MKSM-----AVEAVLLLQEYI----------NDEDAEN- 394
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+ +LLV + ++GC++GK G VI +R T ANI + + D++V++SG+
Sbjct: 395 -VKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK--------DDLVEVSGEV 445
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN-- 356
+ + AL ++ L ++ DK + + PPA + L SS
Sbjct: 446 SSVRDALIQIVLRLREDVLGDKDSVATRK---------PPARTDNCSFLSGSSNAGYTLP 496
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
S + M ST GYG P+ G + S P G + + +++IL A + V+GKG
Sbjct: 497 SFMSSMASTSGFHGYGSFPA--GDNVLGSTGPYSYGRLPSSSALEILIPAHAMSKVMGKG 554
Query: 417 GFNVKQLQQETGASIHVEDAPT 438
G N++ +++ +GA I + + T
Sbjct: 555 GGNLENIRRISGAMIEISASKT 576
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 105/276 (38%), Gaps = 52/276 (18%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI----------RASAF 450
+ILC +GGVIGK G + ++ T A I V D +RVI F
Sbjct: 39 RILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGF 98
Query: 451 EGLWN-PRSQTIDAILQLQNKTSEFSEKGTITT----------RLLVPSSKVGCILGQGG 499
N P DA+L++ + E+ T RLLVP S+ ++G+ G
Sbjct: 99 TKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAG 158
Query: 500 HVINEMRRRTQADIRVVGARVKLQDP-HPGSSEC--IVDIRGSSEHLISAHGTYQSFMTS 556
I +RRRT+A ++VV V DP H + E +V I G E + A F S
Sbjct: 159 ENIKRIRRRTRASVKVVSKDV--SDPSHVCAMEYDNVVVISGEPESVKQAL-----FAVS 211
Query: 557 GQSMKVQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSS 616
K+ P +NI P S+ +Q P V ++ PQ
Sbjct: 212 AIMYKINPR--ENI-PLDST---------------SQDVPAASVIVPSDLSNSVYPQTGF 253
Query: 617 YPMHTH---QGAGTNPHITPTQSSYYSSSAQQGTYP 649
Y H QGAG + S + A+ P
Sbjct: 254 YSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANP 289
>gi|255537898|ref|XP_002510014.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223550715|gb|EEF52201.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 679
Score = 201 bits (511), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 169/467 (36%), Positives = 251/467 (53%), Gaps = 62/467 (13%)
Query: 115 SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
S+ Q NS V+RILCP+ K GG+IGK G I+ +R+ET AK+ V +T+PGS+ERV
Sbjct: 23 SKLQKTVNSPVRGVVFRILCPASKTGGIIGKGGAIISQIRQETGAKVRVEETVPGSDERV 82
Query: 175 IIIYSSPTKIAKTQN--------------------------KDDDSAAET-----KKESM 203
+II + K + N +DD ET +S+
Sbjct: 83 VIIAAGSDKEMEVNNAEQNRGDSDDKEPNVGEESNGKQAGSDEDDENKETVSVEHSTKSV 142
Query: 204 EPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
+ Q AL+ V +R++E + +++ + S T RLLV ++ VGCLLGK G VI+
Sbjct: 143 RETSSLQKALVLVFERMLEAEPEMDEGNEEKKKPSMSTLRLLVLSSQVGCLLGKGGSVIK 202
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPS 323
++ +E+GA IR+LP D+LP CA TDE+VQI+G+ + ++AL V+ L +NP KD P
Sbjct: 203 QMSAESGAQIRILPRDKLPICASPTDELVQIAGEVDAIRKALQSVAQQLLENPPKD--PE 260
Query: 324 SFPQAYGGQNFHS--PPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSG 381
++P G + HS P P + +P S+ AR ++ YG P G
Sbjct: 261 AYPPISTGPSSHSFGHPLPRPEAYPPPYHSFNARGTT------------YGAGPREFHEG 308
Query: 382 SINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD 441
+ PG+M + ++LC K+GGVIGKGG +K LQQETG I V + +DS+
Sbjct: 309 GM----PGRMRPAPDMLTFRLLCLDEKVGGVIGKGGAIIKTLQQETGCEIKVLEGVSDSE 364
Query: 442 ERVIRASAFEGLWNPRSQTIDAILQLQNKTS------EFSEKGTITTRLLVPSSKVGCIL 495
+R+I S + S DA+L++Q + + E EK I RLLV S+++GC+L
Sbjct: 365 DRIILISGPAHPDDRISAAQDAVLRVQTRIARALPLPEGKEKAVI-GRLLVSSNQIGCLL 423
Query: 496 GQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS-SECIVDIRGSSE 541
G+GG ++ EMR+ T A IR++G K Q P S +E +V I G E
Sbjct: 424 GKGGAIMAEMRKSTGAYIRILG---KDQIPKCASENEEVVQINGEHE 467
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 113/199 (56%), Gaps = 25/199 (12%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +R+LC K+GGVIGK G I+K+L++ET +I V + + SE+R+I+I S P
Sbjct: 318 PDMLTFRLLCLDEKVGGVIGKGGAIIKTLQQETGCEIKVLEGVSDSEDRIILI-SGPA-- 374
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
+ DD +A AQDA+L+V RI + + E + I RL
Sbjct: 375 ----HPDDRISA------------AQDAVLRVQTRIAR-----ALPLPEGKEKAVI-GRL 412
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LV +N +GCLLGK G ++ +R TGA IR+L D++P CA +E+VQI+G+ V + A
Sbjct: 413 LVSSNQIGCLLGKGGAIMAEMRKSTGAYIRILGKDQIPKCASENEEVVQINGEHEVVQEA 472
Query: 305 LYEVSTLLHQNPRKDKPPS 323
L +++T L + +D PS
Sbjct: 473 LLQITTRLRNHFFRDVFPS 491
>gi|15217969|ref|NP_175569.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|12321677|gb|AAG50879.1|AC025294_17 hypothetical protein [Arabidopsis thaliana]
gi|12325367|gb|AAG52626.1|AC024261_13 hypothetical protein; 15135-12645 [Arabidopsis thaliana]
gi|31711718|gb|AAP68215.1| At1g51580 [Arabidopsis thaliana]
gi|110735740|dbj|BAE99849.1| hypothetical protein [Arabidopsis thaliana]
gi|332194564|gb|AEE32685.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 621
Score = 200 bits (509), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 137/416 (32%), Positives = 204/416 (49%), Gaps = 71/416 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP-GSEERVIIIYS--------- 179
+R+LCP+ + G +IGK G++++ L+ T +KI V D IP SEERV++I +
Sbjct: 21 FRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKKKDES 80
Query: 180 ------SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD 233
+P Q K + A + + E +AQ ALL+V +RI+ D + D+
Sbjct: 81 NVCDSENPGSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVFERIVFGDDAATVDGDE 140
Query: 234 -DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
D S R++V N V L+ K G +IQ++R ++GA +R+ D++PPCA D ++
Sbjct: 141 LDKGESEGLCRMIVRGNQVDYLMSKGGKMIQKIREDSGAIVRISSTDQIPPCAFPGDVVI 200
Query: 293 QISGKPNVAKRALYEVSTLLHQN-----------PRKDKPPSSFPQAYGGQNFHSPPAPM 341
Q++GK + K+AL V+ L ++ P+ PP Y Q H PP PM
Sbjct: 201 QMNGKFSSVKKALLLVTNCLQESGAPPTWDECPFPQPGYPPEYHSMEYHPQWDHPPPNPM 260
Query: 342 ADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
P +G P V E + +
Sbjct: 261 ---------------------------------PEDVG--------PFNRPVVEEEVAFR 279
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTI 461
+LC A K+G +IGKGG V+ LQ E+GASI V D DS+ER+I SA E L S
Sbjct: 280 LLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQ 339
Query: 462 DAILQLQNKTSE--FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
D ++++ N+ E F + RLLV S +G +LG+GGH+I+EMRR T A IRV
Sbjct: 340 DGVMRVHNRIVEIGFEPSAAVVARLLVHSPYIGRLLGKGGHLISEMRRATGASIRV 395
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 101/189 (53%), Gaps = 30/189 (15%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ +R+LCP+ K+G +IGK G +V++L+ E+ A I V+D SEER+I+I
Sbjct: 275 EVAFRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVI--------- 325
Query: 187 TQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
+ +E++E H AQD +++VH+RI+E ++ + ARLL
Sbjct: 326 -----------SARENLERRHSLAQDGVMRVHNRIVEIGF---------EPSAAVVARLL 365
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
V + +G LLGK G +I +R TGA+IRV D+ DE+VQ+ G + AL
Sbjct: 366 VHSPYIGRLLGKGGHLISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDAL 425
Query: 306 YEVSTLLHQ 314
+++ L +
Sbjct: 426 FQILCRLRE 434
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 388 PGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERVIR 446
P + ++LC A + G +IGKGG ++ LQ TG+ I V +D P S+ERV+
Sbjct: 9 PATTATAAESVHFRLLCPATRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVL 68
Query: 447 ASAFEGLWNPRSQTIDA 463
A G S D+
Sbjct: 69 IIAPSGKKKDESNVCDS 85
>gi|356507955|ref|XP_003522728.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 678
Score = 199 bits (506), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 137/440 (31%), Positives = 218/440 (49%), Gaps = 68/440 (15%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P V+R+LC + +IG VIGK G+I+ +R ET K+ + + +PG +ERVI I S +
Sbjct: 31 PGSVVFRLLCHASRIGSVIGKGGSIISQIRLETGVKVKIEEAVPGCDERVITISGSDKEA 90
Query: 185 -------AKTQNKDDDSAAETKK--------------------------ESMEPHCAAQD 211
K N +DD +E K +S + + A
Sbjct: 91 EEYTAEQGKEVNDNDDVGSEGKDGEEKNGSDGNGNEDKEEKDAVPVEDSKSEKGNSAIWK 150
Query: 212 ALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGA 271
A+ V +R++E ++ N++S+ RLL+ VGC+LGK G VI+R+ +E+GA
Sbjct: 151 AISLVFERMVEGVEETTEGDEESNKSSSFFLRLLILTAQVGCVLGKGGSVIKRMAAESGA 210
Query: 272 NIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGG 331
IR+LP D++P CA DE+VQISG V ++AL VS L +NP +D S G
Sbjct: 211 QIRILPKDKVPVCASAFDEIVQISGSVEVVRKALQSVSQQLLENPPRDH--ESLSAKSTG 268
Query: 332 QNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPP--- 388
+ HS +P N S P+ G D + +S PP
Sbjct: 269 PSSHS------------FGQFPPHNHSFAAQ-GEPFATGPHD------ISAFHSAPPLIP 309
Query: 389 --------GQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS 440
G+ + + ++LC ++G +IGKGG +K +QQET + I V +AP DS
Sbjct: 310 KFHEAAIHGRTRPLQEMLTFRLLCPVERVGNIIGKGGAIIKTVQQETVSEIKVLEAPPDS 369
Query: 441 DERVIRASAFEGLWNPRSQTIDAILQLQNKTSE---FSEKGTITTRLLVPSSKVGCILGQ 497
++ VI S + S +A+ ++Q + ++ + T+ R LV S+++GC+LG+
Sbjct: 370 EDCVIVISGPAHPEDRVSPVQEAVFRVQTRIAKPIPDANDHTMLARFLVSSNQIGCLLGK 429
Query: 498 GGHVINEMRRRTQADIRVVG 517
GG +I EMR+++ A IR++G
Sbjct: 430 GGSIITEMRKKSGAHIRILG 449
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 120/231 (51%), Gaps = 42/231 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+LCP ++G +IGK G I+K++++ET ++I V + P SE+ VI+I
Sbjct: 329 FRLLCPVERVGNIIGKGGAIIKTVQQETVSEIKVLEAPPDSEDCVIVI------------ 376
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
S ++ + P Q+A+ +V RI + D + T+ AR LV +N
Sbjct: 377 ----SGPAHPEDRVSP---VQEAVFRVQTRIAK--------PIPDANDHTMLARFLVSSN 421
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
+GCLLGK G +I +R ++GA+IR+L D++P CA +E++Q++G+ AL +++
Sbjct: 422 QIGCLLGKGGSIITEMRKKSGAHIRILGKDKVPKCASEDEEVIQVNGEIEAVHEALLQIT 481
Query: 310 TLLHQNPRKDKPPSS--------------FPQAYGGQNFHSPPAPMADMHP 346
T L + +D PS FP Y G+ SPP +D+ P
Sbjct: 482 TRLKHHFFRDSYPSVNYPSNSPFLDQLPPFP-PYLGRRGLSPPGMYSDLGP 531
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 40/65 (61%), Gaps = 7/65 (10%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIR 537
G++ RLL +S++G ++G+GG +I+++R T G +VK+++ PG E ++ I
Sbjct: 32 GSVVFRLLCHASRIGSVIGKGGSIISQIRLET-------GVKVKIEEAVPGCDERVITIS 84
Query: 538 GSSEH 542
GS +
Sbjct: 85 GSDKE 89
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
+T RLL P +VG I+G+GG +I +++ T ++I+V L+ P P S +C++ I G
Sbjct: 327 LTFRLLCPVERVGNIIGKGGAIIKTVQQETVSEIKV------LEAP-PDSEDCVIVISG 378
>gi|7486302|pir||T04533 hypothetical protein F28J12.30 - Arabidopsis thaliana
gi|2832642|emb|CAA16717.1| putative protein [Arabidopsis thaliana]
gi|7268630|emb|CAB78839.1| putative protein [Arabidopsis thaliana]
Length = 846
Score = 197 bits (502), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 145/424 (34%), Positives = 216/424 (50%), Gaps = 55/424 (12%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
VYRILCP +GGVIGK+G ++ ++R T+AKI V D + G +RVI IY S
Sbjct: 344 VVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSV------ 397
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
+ + TK E+ EP C AQDALLKV+D I+ D ++ D +++ RLLVP
Sbjct: 398 -KEKQEEIGFTKSEN-EPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNK-ECRLLVP 454
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---CAMNTDEMVQISGKPNVAKRA 304
+ L+GK G+ I+R+R T A+++V+ D P CAM D +V ISG+P K+A
Sbjct: 455 FSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQA 514
Query: 305 LYEVSTLLHQ-NPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWP---------- 353
L+ VS ++++ NPR++ P S Q P A + L NS +P
Sbjct: 515 LFAVSAIMYKINPRENIPLDSTSQ-------DVPAASVIVPSDLSNSVYPQTGFYSNQDH 567
Query: 354 -----ARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPP--GQMGEV-SAEFSMKILCS 405
A S S GY + + +S P G G S E K+LC
Sbjct: 568 ILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCP 627
Query: 406 AGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD--SDERVIRASAFEGLW--------- 454
I VIGKGG +K++++ +G+ I V D+ T DE VI +A E L+
Sbjct: 628 LCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATEILFCCLSTPFVF 687
Query: 455 -----NPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
+ +S ++A+L LQ ++ + + +LLV S +GC++G+ G VINE+R+RT
Sbjct: 688 MQSPDDMKSMAVEAVLLLQEYIND-EDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRT 746
Query: 510 QADI 513
A+I
Sbjct: 747 NANI 750
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 125/268 (46%), Gaps = 52/268 (19%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVAD--TIPGSEERVIIIY 178
G+S+ + V+++LCP I VIGK G+ +K +RE + + I V D T G +E VII+
Sbjct: 613 GSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVT 672
Query: 179 SSP-------TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMAS 231
++ T Q+ DD +SM A +A+L + + I +
Sbjct: 673 ATEILFCCLSTPFVFMQSPDD-------MKSM-----AVEAVLLLQEYI----------N 710
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
D+D EN + +LLV + ++GC++GK G VI +R T ANI + + D++
Sbjct: 711 DEDAEN--VKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK--------DDL 760
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSS 351
V++SG+ + + AL ++ L ++ DK + + PPA + L SS
Sbjct: 761 VEVSGEVSSVRDALIQIVLRLREDVLGDKDSVATRK---------PPARTDNCSFLSGSS 811
Query: 352 WPARN--SSLHGMPSTPWMGGYGDQPSR 377
S + M ST GYG P +
Sbjct: 812 NAGYTLPSFMSSMASTSGFHGYGSFPVK 839
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 105/276 (38%), Gaps = 52/276 (18%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI----------RASAF 450
+ILC +GGVIGK G + ++ T A I V D +RVI F
Sbjct: 347 RILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGF 406
Query: 451 EGLWN-PRSQTIDAILQLQNKTSEFSEKGTITT----------RLLVPSSKVGCILGQGG 499
N P DA+L++ + E+ T RLLVP S+ ++G+ G
Sbjct: 407 TKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAG 466
Query: 500 HVINEMRRRTQADIRVVGARVKLQDP-HPGSSEC--IVDIRGSSEHLISAHGTYQSFMTS 556
I +RRRT+A ++VV V DP H + E +V I G E + A F S
Sbjct: 467 ENIKRIRRRTRASVKVVSKDV--SDPSHVCAMEYDNVVVISGEPESVKQAL-----FAVS 519
Query: 557 GQSMKVQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSS 616
K+ P +NI P S+ +Q P V ++ PQ
Sbjct: 520 AIMYKINPR--ENI-PLDST---------------SQDVPAASVIVPSDLSNSVYPQTGF 561
Query: 617 YPMHTH---QGAGTNPHITPTQSSYYSSSAQQGTYP 649
Y H QGAG + S + A+ P
Sbjct: 562 YSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANP 597
>gi|297847528|ref|XP_002891645.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297337487|gb|EFH67904.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 622
Score = 197 bits (501), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 140/410 (34%), Positives = 209/410 (50%), Gaps = 58/410 (14%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP-GSEERVIIIYS--------- 179
+R+LCP+ + G +IGK G++++ L+ T +KI V D IP SEERV++I +
Sbjct: 21 FRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKKKDDS 80
Query: 180 ------SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD 233
+P+ Q K + A + + E +AQ ALL+V +RI+ D + D
Sbjct: 81 NVFDSENPSSEEPKQEKGSECAGTSGGDDEEAPSSAQMALLRVLERIVFGDDAASVDGDG 140
Query: 234 -DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
D S R++V N V L+ K G +IQR+R ++GA +R+ D++PPCA D ++
Sbjct: 141 LDKGESESLCRMIVRGNQVDFLMSKGGKMIQRIREDSGAIVRISSTDQIPPCAFPGDVVI 200
Query: 293 Q--ISGKPNVAKRALYEVSTLLHQN---PRKDKPPSSFPQAYGGQNFHSPPAPMADMHPL 347
Q I+GK + K+AL ++ L ++ P D+ P FPQ ++HS + HP
Sbjct: 201 QMKITGKFSSVKKALLLITNCLQESGAPPTWDECP--FPQPGYPPDYHS-----MEYHP- 252
Query: 348 GNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAG 407
W + + MP P V E S ++LC A
Sbjct: 253 ---QW---DHPPNPMP--------------------EDVVPFNRPVVEEEVSFRLLCPAD 286
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
K+G +IGKGG V+ LQ E+GASI V D DS+ER+I SA E L S D ++++
Sbjct: 287 KVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVISARENLERRHSLAQDGVMRV 346
Query: 468 QNKTSE--FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
N+ E F + RLLV S +G +LG+GGH+I+EMRR T A IRV
Sbjct: 347 HNRIVEIGFEPSAAVVARLLVHSPYIGRLLGKGGHLISEMRRATGASIRV 396
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 62/186 (33%), Positives = 100/186 (53%), Gaps = 30/186 (16%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+LCP+ K+G +IGK G +V++L+ E+ A I V+D SEER+I+I
Sbjct: 279 FRLLCPADKVGSLIGKGGAVVRALQNESGASIKVSDPTHDSEERIIVI------------ 326
Query: 190 KDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
+ +E++E H AQD +++VH+RI+E ++ + ARLLV +
Sbjct: 327 --------SARENLERRHSLAQDGVMRVHNRIVEIGF---------EPSAAVVARLLVHS 369
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+G LLGK G +I +R TGA+IRV D+ DE+VQ+ G + AL+++
Sbjct: 370 PYIGRLLGKGGHLISEMRRATGASIRVFAKDQATKYESQHDEIVQVIGNLKTVQDALFQI 429
Query: 309 STLLHQ 314
L +
Sbjct: 430 LCRLRE 435
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 7/95 (7%)
Query: 388 PGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERVIR 446
P + ++LC A + G +IGKGG ++ LQ TG+ I V +D P S+ERV+
Sbjct: 9 PATTATAAESVHFRLLCPAARTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVL 68
Query: 447 ASAFEGLWNPRSQTIDAILQLQNKTSE--FSEKGT 479
A G S D+ +N +SE EKG+
Sbjct: 69 IIAPSGKKKDDSNVFDS----ENPSSEEPKQEKGS 99
>gi|449456987|ref|XP_004146230.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
gi|449517605|ref|XP_004165836.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 666
Score = 191 bits (484), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 172/545 (31%), Positives = 261/545 (47%), Gaps = 79/545 (14%)
Query: 108 KGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI 167
+GN S+ Q S T YRILC K GGVIGK+G+I+KS+R+ T A I V + +
Sbjct: 42 RGNAVRPSKPQD--QSLMVTTTYRILCHDAKAGGVIGKSGSIIKSIRQHTGAWINVHELV 99
Query: 168 PGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL-- 225
PG EER+I +I+ T+ +D E + S P AQ+AL +H+RI+E ++
Sbjct: 100 PGDEERII-------EISDTRRRD----PEGRMPSFSP---AQEALFLIHERILESEMSP 145
Query: 226 -FGGMASDDDNENS---------------TITARLLVPNNMVGCLLGKRGDVIQRLRSET 269
F GM ++E + RL+V VGCLLGK G +I+++R ET
Sbjct: 146 GFNGMGYGPEDEEDDYGGVRGGGGGGCGGRVATRLVVSRMHVGCLLGKGGKIIEQMRMET 205
Query: 270 GANIRVLPADR-LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQA 328
IR+LP D LP C ++E+VQI G N K+A+ VS+ L ++ +D+ S F
Sbjct: 206 KTQIRILPRDHNLPRCISMSEEIVQIVGDTNAVKKAIAIVSSRLRESQHRDR--SHF--- 260
Query: 329 YGGQNFHSPPAPMADMHPLGNSSWP--ARNSSLHGMPSTPWMGGY----GDQPSRM---- 378
+G HSP + P + P AR + G P P M D SR
Sbjct: 261 HG--RLHSPER----IFPPEDDYVPHNARRLPMDGRPFRPRMSASNTRGNDYSSRQSNFM 314
Query: 379 ---GSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
G+ +N GE + KILC K+ VIG+ ++ L+ + G I V D
Sbjct: 315 VEPGAAPVNDNMMPFYGE---DLVFKILCPIEKVDSVIGESNGIIELLRNDVGVDIKVSD 371
Query: 436 APTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF--SEKGTITTRLLVPSSKVGC 493
T S+E+++ S+ EG + +A+L +Q + + ++ +TTRLLVPSS +GC
Sbjct: 372 PVTGSNEQILIISSDEGPDDELFPAQEALLHIQTRIVDLVPDKENIVTTRLLVPSSDIGC 431
Query: 494 ILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSEC---IVDIRGSSEHLISAHGTY 550
+ G+ G ++ EM+R T A++ +V R L G+ E I DI+ + + L+
Sbjct: 432 LEGRDGSLL-EMKRLTGANVHIV-PREDLPMFVSGADELVQIIGDIKAARDALVELTSRL 489
Query: 551 QSFMTSGQSMKVQPSSYQNINPQQSSCQTMSS--HQSSYQNMNTQQSPYHRVNAQQS-PY 607
++ + K + +PQ S TM S + S N N H N S +
Sbjct: 490 RNCLYKEPFQK-------DASPQVSVQSTMVSLGLEESSSNNNAAAREVHSGNDSASTAF 542
Query: 608 QNINP 612
QN+ P
Sbjct: 543 QNVQP 547
>gi|224141139|ref|XP_002323932.1| predicted protein [Populus trichocarpa]
gi|222866934|gb|EEF04065.1| predicted protein [Populus trichocarpa]
Length = 722
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 136/411 (33%), Positives = 213/411 (51%), Gaps = 44/411 (10%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+LC + +IGGVIGKAGNI+K L+++T AK+ + D S +RVI + T+ A +
Sbjct: 38 FRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPITQSAVVFS 97
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
+ +SA E K Q+AL++V +RI+E A D + ++ R+L +
Sbjct: 98 R-IESAVEVSK--------GQEALVRVFERILEV-----AAESDSVADGVVSCRMLAEVS 143
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VG ++GK G V++++R + G I+VL D+LP CA + +EM++I G + K+ L VS
Sbjct: 144 SVGAVIGKGGKVVEKIRKDCGCRIKVL-VDKLPDCAASNEEMIEIEGDVSAVKKGLVAVS 202
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWP--ARNSSL-------- 359
L DK + + + S ++HP ++ P A+NSS+
Sbjct: 203 RCLQDCQPVDKTRVTNSKPAEAVSRVSLSDVRVEIHPRHSAVLPTIAQNSSVLPTIPQHS 262
Query: 360 HGMPSTPWMG-GYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
G+P+ P Y + + S P + + +ILC+ +IGGVIGKGG
Sbjct: 263 LGLPTIPKSSINYASRVHPLSLESDRVVTPDT--NIPQQLVFRILCTTDRIGGVIGKGGN 320
Query: 419 NVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDA----ILQLQNKTSEF 474
V+ LQ ETGA+I V ++ DER+I +A E NP S+ A +L
Sbjct: 321 IVRALQNETGAAISVGPTVSECDERLITVTASE---NPESRYSAAQKTIVLVFSRAVESG 377
Query: 475 SEKGT---------ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
EKG +T RL+V S+VGC+LG+GG +I+EMR+ T IR++
Sbjct: 378 IEKGLDPGSSRGSPVTARLVVSPSQVGCLLGKGGTIISEMRKATSTSIRII 428
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 81/235 (34%), Positives = 120/235 (51%), Gaps = 25/235 (10%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P V+RILC + +IGGVIGK GNIV++L+ ET A I+V T+ +ER+I + +S
Sbjct: 297 PQQLVFRILCTTDRIGGVIGKGGNIVRALQNETGAAISVGPTVSECDERLITVTASENPE 356
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
++ + AAQ ++ V R +E + G+ + S +TARL
Sbjct: 357 SR-------------------YSAAQKTIVLVFSRAVESGIEKGL-DPGSSRGSPVTARL 396
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD-RLPPCAMNTDEMVQISGKPNVAKR 303
+V + VGCLLGK G +I +R T +IR++ D R P C TD +V+ISG K
Sbjct: 397 VVSPSQVGCLLGKGGTIISEMRKATSTSIRIIVGDQRNPKCVPETDHVVEISGDFVNVKD 456
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMAD-MHPLGNSSW-PARN 356
A+Y V+ L N S P A + + +P M P+ +SSW P R+
Sbjct: 457 AIYHVTGRLRDNLFSGM--LSTPGARSNSSVLAEISPYVKLMDPVRDSSWEPVRD 509
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 90/160 (56%), Gaps = 19/160 (11%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI--------R 446
S S ++LC A +IGGVIGK G +K LQQ+TGA + +EDAP+DS +RVI
Sbjct: 33 SGHVSFRLLCHASRIGGVIGKAGNIIKGLQQQTGAKVRIEDAPSDSPDRVITVIGPITQS 92
Query: 447 ASAFEGLWNP--RSQTIDAILQLQNKTSEFSEK------GTITTRLLVPSSKVGCILGQG 498
A F + + S+ +A++++ + E + + G ++ R+L S VG ++G+G
Sbjct: 93 AVVFSRIESAVEVSKGQEALVRVFERILEVAAESDSVADGVVSCRMLAEVSSVGAVIGKG 152
Query: 499 GHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
G V+ ++R+ I+V+ KL D S+E +++I G
Sbjct: 153 GKVVEKIRKDCGCRIKVLVD--KLPD-CAASNEEMIEIEG 189
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T ++VP + G + G+ G + +R+ + GA+V + +P G+S+ IV I G+
Sbjct: 651 TVEIVVPENAFGSVYGENGSNLARLRQ-------ISGAKVIVHEPRLGTSDRIVVISGTP 703
Query: 541 EHLISAHGTYQSFMTSGQS 559
+ +A Q+F+ +GQS
Sbjct: 704 DETQAAQSLLQAFILTGQS 722
>gi|356516077|ref|XP_003526723.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 647
Score = 189 bits (481), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 141/414 (34%), Positives = 218/414 (52%), Gaps = 53/414 (12%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T YRILC K GGVIGK+G+I+KS+R+ T A I V + +PG EER+I +I+ T
Sbjct: 61 TSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERII-------EISDT 113
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN---------ENS 238
+ +D E + S P AQ+ALL +H+RI+E D G+A DD+
Sbjct: 114 RRRD----PEGRMPSFSP---AQEALLLIHERILESDAAFGVAEDDEEYGAGRGGGAGRD 166
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDEMVQISGK 297
+ RL+V VGCLLGK G +I+++R ET IR+LP D LP C ++E+VQ+ G
Sbjct: 167 RVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGD 226
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPP---APMADMHP-------- 346
N K AL +S+ L ++ +D+ S F +G HSP +P D P
Sbjct: 227 VNAVKNALVIISSRLRESQHRDR--SHF---HG--RVHSPERFFSPDDDYVPHVTSGSRR 279
Query: 347 --LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILC 404
+ +S+ +R S+ + + Y +P G+ + G GE E +ILC
Sbjct: 280 SSVDGASFGSRGSNTNSRNNNHPSLSYAMEP---GAAPVVDDAQGFYGE---ELVFRILC 333
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
K+ +IG+ V+ LQ E G + V D SDE++I ++ EG + +A+
Sbjct: 334 PVEKVDLIIGESDGIVEFLQSEVGVDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEAL 393
Query: 465 LQLQNKTSE--FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
L +Q + + + TITTRL+VPSS++ C+ G+ ++E+RR T A+I+++
Sbjct: 394 LHIQTRIVDLVLDKDNTITTRLVVPSSEIECLDGKDVS-LSEIRRLTGANIQIL 446
Score = 112 bits (281), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/333 (29%), Positives = 164/333 (49%), Gaps = 47/333 (14%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V+RILCP K+ +IG++ IV+ L+ E + V D + GS+E++III S
Sbjct: 326 ELVFRILCPVEKVDLIIGESDGIVEFLQSEVGVDVKVTDPVGGSDEQIIIITSE------ 379
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+ DD+ + P AQ+ALL + RI++ + D DN TIT RL+V
Sbjct: 380 -EGPDDE---------LFP---AQEALLHIQTRIVD------LVLDKDN---TITTRLVV 417
Query: 247 PNNMVGCLLGKRGDV-IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
P++ + CL GK DV + +R TGANI++LP D LP C TDE+VQI G+ A+ A+
Sbjct: 418 PSSEIECLDGK--DVSLSEIRRLTGANIQILPRDDLPLCVAKTDELVQIVGEIKAARDAV 475
Query: 306 YEVSTLLHQNPRKD---KPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN--SSLH 360
EV++ L +D + P P G S ++ P+ +S +N +
Sbjct: 476 VEVTSRLRSYLYRDFFQRDPIPLPAPLPGAEASSS----NNIVPVAETSTTYQNVQTVAA 531
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF----SMKILCSAGKIGGVIGKG 416
+P G + + SG + G + ++ +++++ + +I K
Sbjct: 532 ALPPKETGGSSTEVGKQKESGRRDDVLSG-LNRIAVPLVTRSTLEVVIPEYAVPKLIAKS 590
Query: 417 GFNVKQLQQETGASIH-VEDAPTDSDERVIRAS 448
+ Q+ + +GA++ VED P D +++I+ S
Sbjct: 591 KSKLAQISELSGANVTLVEDRP-DVTQKIIQIS 622
>gi|449516663|ref|XP_004165366.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 643
Score = 189 bits (480), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 221/411 (53%), Gaps = 48/411 (11%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +R+LC + +IGGVIGK+G ++K L++ T KI V + S +RV+ + SP
Sbjct: 55 PGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALT 114
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASD-----DDNENST 239
++ + + A+ + E+ + AQ+ LLKV +RI+E +A++ E
Sbjct: 115 SRVFLEQNSGASGEEVEASK----AQEGLLKVFERILE------VAAEIEGVEVGAEVGV 164
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ RLL VG ++GK G V++++R E+G IRVL D+LP CA +DEM++I G
Sbjct: 165 VYCRLLADVAQVGSVIGKGGKVVEKIRKESGCRIRVL-TDKLPACAGPSDEMIEIEGDVW 223
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
K+AL VS L +D PPS + P D+H RNS L
Sbjct: 224 AIKKALLAVSRRL-----QDCPPSEKRTVRPAEAVIHETLP--DLH---MDHILQRNSVL 273
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINS--CPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
+PS+ + G + S SI++ PP + KILC+ +IGGVIGKGG
Sbjct: 274 PILPSSSNIFASG-----IHSLSIDADMLPPVDTNVAQQDVVFKILCANDRIGGVIGKGG 328
Query: 418 FNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGL---WNPR--------SQTIDAILQ 466
V+ LQ E+GA++ V + T DER+I +A E + ++P S+++D ++
Sbjct: 329 TIVRALQNESGATVSVGPSVTGCDERLISITASENIESRYSPAQKAVVLVFSRSVDVAIE 388
Query: 467 LQNKTSEFSEKGT-ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
K E S KG+ + RL+VPS++VGC+LG+GG +I+E+R+ T +IR++
Sbjct: 389 ---KWQESSSKGSPVVARLVVPSNQVGCVLGKGGVIISEIRKVTGTNIRII 436
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 107/345 (31%), Positives = 171/345 (49%), Gaps = 44/345 (12%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSP 181
N D V++ILC + +IGGVIGK G IV++L+ E+ A ++V ++ G +ER+I I
Sbjct: 303 NVAQQDVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISI---- 358
Query: 182 TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
+A+E + P AQ A++ V R + D+ + ++ S +
Sbjct: 359 ------------TASENIESRYSP---AQKAVVLVFSRSV--DVAIEKWQESSSKGSPVV 401
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
ARL+VP+N VGC+LGK G +I +R TG NIR++ +D++P CA +DE+VQISG+ +
Sbjct: 402 ARLVVPSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNV 461
Query: 302 KRALYEVSTLLHQN-------PRKDKPP--SSFPQAYGGQNF--HSPPAPMADM---HPL 347
+ ALY V+ L N +D P S P +F HS D+ H L
Sbjct: 462 QDALYNVTGRLRDNLFLVPYGRVRDTAPLVRSTPVGTSHGSFMQHSTAQSSDDLGLSHSL 521
Query: 348 GNSS----WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKIL 403
+ S WP + SL G+ S PS + S G + +++I+
Sbjct: 522 DSPSSPGLWPPQ--SLSGISSRAISDAGRGLPSHRSGVQLGS---GNKTAIVTNTTVEIV 576
Query: 404 CSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS 448
I V G+ G N+ +L+Q +GA + V + +++R+I S
Sbjct: 577 VPDDVISLVYGENGTNLTRLRQISGAKVIVHEPDPITNDRLIVIS 621
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 90/180 (50%), Gaps = 41/180 (22%)
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
PPG + + ++LC A +IGGVIGK GF +KQLQQ TG I VE+AP++S +RV+
Sbjct: 54 PPGHV-------AFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVT 106
Query: 447 A---------------SAFEGLWNPRSQTIDAILQLQNKTSEFSEK----------GTIT 481
S G S+ + +L++ + E + + G +
Sbjct: 107 VIGSPALTSRVFLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVY 166
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP---GSSECIVDIRG 538
RLL ++VG ++G+GG V+ ++R+ + IRV L D P G S+ +++I G
Sbjct: 167 CRLLADVAQVGSVIGKGGKVVEKIRKESGCRIRV------LTDKLPACAGPSDEMIEIEG 220
>gi|449438568|ref|XP_004137060.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 658
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 139/411 (33%), Positives = 221/411 (53%), Gaps = 48/411 (11%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +R+LC + +IGGVIGK+G ++K L++ T KI V + S +RV+ + SP
Sbjct: 50 PGHVAFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVTVIGSPALT 109
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASD-----DDNENST 239
++ + + A+ + E+ + AQ+ LLKV +RI+E +A++ E
Sbjct: 110 SRVFLEQNSGASGEEVEASK----AQEGLLKVFERILE------VAAEIEGVEVGAEVGV 159
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ RLL VG ++GK G V++++R E+G IRVL D+LP CA +DEM++I G
Sbjct: 160 VYCRLLADVAQVGSVIGKGGKVVEKIRKESGCRIRVL-TDKLPACAGPSDEMIEIEGDVW 218
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
K+AL VS L P +K +A H + D+H RNS L
Sbjct: 219 AIKKALLAVSRRLQDCPPSEKRTVRPAEAV----IHET---LPDLH---MDHILQRNSVL 268
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINS--CPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
+PS+ + G + S SI++ PP + KILC+ +IGGVIGKGG
Sbjct: 269 PILPSSSNIFASG-----IHSLSIDADMLPPVDTNVAQQDVVFKILCANDRIGGVIGKGG 323
Query: 418 FNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGL---WNPR--------SQTIDAILQ 466
V+ LQ E+GA++ V + T DER+I +A E + ++P S+++D ++
Sbjct: 324 TIVRALQNESGATVSVGPSVTGCDERLISITASENIESRYSPAQKAVVLVFSRSVDVAIE 383
Query: 467 LQNKTSEFSEKGT-ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
K E S KG+ + RL+VPS++VGC+LG+GG +I+E+R+ T +IR++
Sbjct: 384 ---KWQESSSKGSPVVARLVVPSNQVGCVLGKGGVIISEIRKVTGTNIRII 431
Score = 129 bits (323), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 109/353 (30%), Positives = 177/353 (50%), Gaps = 55/353 (15%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D V++ILC + +IGGVIGK G IV++L+ E+ A ++V ++ G +ER+I I
Sbjct: 303 DVVFKILCANDRIGGVIGKGGTIVRALQNESGATVSVGPSVTGCDERLISI--------- 353
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+A+E + P AQ A++ V R + D+ + ++ S + ARL+V
Sbjct: 354 -------TASENIESRYSP---AQKAVVLVFSRSV--DVAIEKWQESSSKGSPVVARLVV 401
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+N VGC+LGK G +I +R TG NIR++ +D++P CA +DE+VQISG+ + + ALY
Sbjct: 402 PSNQVGCVLGKGGVIISEIRKVTGTNIRIISSDQVPNCAAESDEIVQISGEFSNVQDALY 461
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFH---SP------PAPMADMHPLGNSSW----- 352
V+ L N +S + GG + + SP AP+ P+G S
Sbjct: 462 NVTGRLRDNLFSSVLSNSGTRNGGGTSVYPETSPYGRVRDTAPLVRSTPVGTSHGSFMQH 521
Query: 353 -PARNSSLHGM------PSTP--W----MGGYGDQP-SRMGSGSINSCPPGQMGE----- 393
A++S G+ PS+P W + G + S G G + Q+G
Sbjct: 522 STAQSSDDLGLSHSLDSPSSPGLWPPQSLSGISSRAISDAGRGLPSHRSGVQLGSGNKTA 581
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERVI 445
+ +++I+ I V G+ G N+ +L+Q +GA + V E P SD ++
Sbjct: 582 IVTNTTVEIVVPDDVISLVYGENGTNLTRLRQISGAKVIVHEPDPITSDRLIV 634
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 90/180 (50%), Gaps = 41/180 (22%)
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
PPG + + ++LC A +IGGVIGK GF +KQLQQ TG I VE+AP++S +RV+
Sbjct: 49 PPGHV-------AFRMLCHASRIGGVIGKSGFVIKQLQQSTGVKIRVEEAPSESPDRVVT 101
Query: 447 A---------------SAFEGLWNPRSQTIDAILQLQNKTSEFSEK----------GTIT 481
S G S+ + +L++ + E + + G +
Sbjct: 102 VIGSPALTSRVFLEQNSGASGEEVEASKAQEGLLKVFERILEVAAEIEGVEVGAEVGVVY 161
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP---GSSECIVDIRG 538
RLL ++VG ++G+GG V+ ++R+ + IRV L D P G S+ +++I G
Sbjct: 162 CRLLADVAQVGSVIGKGGKVVEKIRKESGCRIRV------LTDKLPACAGPSDEMIEIEG 215
>gi|356546743|ref|XP_003541782.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 663
Score = 189 bits (479), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 129/411 (31%), Positives = 213/411 (51%), Gaps = 40/411 (9%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+LC + +IGGVIGK+G+++K+L++ T AKI + D S +RVI++ + K
Sbjct: 47 FRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIADAALSCKVLL 106
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
++++ +K AQ+ALLKV DRI+E D + ++ RL+ +
Sbjct: 107 RNEEVVEVSK---------AQEALLKVFDRILE---VAAEMEGVDVGDRVMSCRLVADSA 154
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G ++GK G V++R++ ETG IRVL D LP CA +DEM++I G+ + K+AL VS
Sbjct: 155 QAGSVIGKGGKVVERIKKETGCKIRVL-TDDLPLCASASDEMIEIEGRVSSVKKALVAVS 213
Query: 310 TLLHQNPRKDKPPSSFPQAYG---GQNFHSPPAPMADMHPLGNSSWPARNSSLH------ 360
L P ++ + Y + + P + P G + + H
Sbjct: 214 QRLQDCPSVNRIKMMGNKPYEIVQYETLDALPREILTAAPRGTLTVVPHETVDHLLLRSS 273
Query: 361 -GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ Y + + S +N + + E S +ILCS ++GGVIGKGG
Sbjct: 274 ALSTLSSSSNSYATRVHSL-SAEVNRVSSLEPKALQQEVSFRILCSNDRVGGVIGKGGNI 332
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ----TIDAILQL-------- 467
V+ LQ ETGA+I + + ++R+I +A E NP S+ A+L
Sbjct: 333 VRALQSETGATISIGPLVAECEDRLITIAASE---NPESRYSPAQKAAVLVFSRSIEVGF 389
Query: 468 -QNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
+ S ++ T+T RL+VPSS+VGC++G+GG +++E+R+ T A+IR++G
Sbjct: 390 EKELDSGLNKGSTVTVRLVVPSSQVGCLIGKGGVIVSEIRKATGANIRIIG 440
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/351 (28%), Positives = 166/351 (47%), Gaps = 59/351 (16%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+RILC + ++GGVIGK GNIV++L+ ET A I++ + E+R+I I
Sbjct: 313 FRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPLVAECEDRLITI------------ 360
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIE----EDLFGGMASDDDNENSTITARLL 245
+A+E + P AQ A + V R IE ++L G+ N+ ST+T RL+
Sbjct: 361 ----AASENPESRYSP---AQKAAVLVFSRSIEVGFEKELDSGL-----NKGSTVTVRLV 408
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP++ VGCL+GK G ++ +R TGANIR++ D++P CA + D++VQISG+ + + AL
Sbjct: 409 VPSSQVGCLIGKGGVIVSEIRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDAL 468
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPP-------APMADMHPLGNSSWPARNSS 358
Y + L N S+ ++ + P P P S +R++
Sbjct: 469 YNATGRLRDNLFVSTQNSAGTRSLSSLRVDTSPYGIQQDFVPHGSQLPATTSHCLSRHTF 528
Query: 359 LHGM-----------PSTPWMGGYGDQPSRMGSGSINS-------------CPPGQMGEV 394
G+ PS+P + + + S SIN G +
Sbjct: 529 AQGIDHLGLSRNLDHPSSPGLWTRNLDLAGINSRSINDFSLGLTSRKGGLELVSGSKSAI 588
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+++I+ I V G+ G N+ +L+Q +GA + + + + +R+I
Sbjct: 589 VTNTTVEIVVPDDTIDCVYGENGRNLVRLRQISGAKVVIHEPRPGTSDRII 639
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 98/204 (48%), Gaps = 42/204 (20%)
Query: 331 GQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQ 390
G NF SP PA+ S+L P P + PS+ S S PP
Sbjct: 2 GSNFLSP---------------PAKRSALDPNPFPP------NGPSKR---SRQSKPPPP 37
Query: 391 MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF 450
+ + ++LC+A +IGGVIGK G +K LQQ TGA I +EDAP +S +RVI A
Sbjct: 38 LSVPPGHVAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQESPDRVILVIAD 97
Query: 451 EGL----------WNPRSQTIDAILQLQNKTSEFSEK--------GTITTRLLVPSSKVG 492
L S+ +A+L++ ++ E + + ++ RL+ S++ G
Sbjct: 98 AALSCKVLLRNEEVVEVSKAQEALLKVFDRILEVAAEMEGVDVGDRVMSCRLVADSAQAG 157
Query: 493 CILGQGGHVINEMRRRTQADIRVV 516
++G+GG V+ +++ T IRV+
Sbjct: 158 SVIGKGGKVVERIKKETGCKIRVL 181
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T ++VP + C+ G+ G + +R+ + GA+V + +P PG+S+ I+ I G+
Sbjct: 593 TVEIVVPDDTIDCVYGENGRNLVRLRQ-------ISGAKVVIHEPRPGTSDRIIVISGTP 645
Query: 541 EHLISAHGTYQSFMTSG 557
+ +A Q+F+ SG
Sbjct: 646 DETQAAQSLLQAFILSG 662
>gi|255561850|ref|XP_002521934.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223538859|gb|EEF40458.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 704
Score = 187 bits (475), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 155/497 (31%), Positives = 246/497 (49%), Gaps = 74/497 (14%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSP 181
NS T YRILC K GGVIGK+G I+KS+R+ T A I V + IPG EER+I
Sbjct: 69 NSLMVTTSYRILCHDMKAGGVIGKSGTIIKSIRQHTGAWINVHELIPGDEERII------ 122
Query: 182 TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM--ASDDD----- 234
+I+ T+ +D E + + P AQ+AL +HDRI+E D GM A+++D
Sbjct: 123 -EISDTRRRD----PEGRMPAFSP---AQEALFLIHDRILESDGQFGMSYANEEDEYGGR 174
Query: 235 ---NENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDE 290
N N+ + RL+V VGCLLGK G +I+++R ET IR+LP D LP C ++E
Sbjct: 175 GINNSNNRVATRLVVSRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHTLPRCVSMSEE 234
Query: 291 MVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA--PMADMHPLG 348
+VQ+ G N K A+ +S+ L ++ +D+ +F +G HSP P D P
Sbjct: 235 IVQVVGDVNAVKNAIAIISSRLRESQHRDRSHGNF---HG--RMHSPERFFPDDDYVPHM 289
Query: 349 NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSA------------ 396
N++ R SS+ G P G P+ S + +S G E A
Sbjct: 290 NNT--GRRSSIDG----PSFGSRASGPNYRNS-NYSSRQYGYNVEAGAPVADSAQPFYGD 342
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+ ++LC A K+ V+G+ + LQ + G + V D + SDE++I S+ EG +
Sbjct: 343 DLVFRMLCPADKVNKVVGESDGILDLLQNDIGVDVKVSDPVSGSDEQMIIISSEEGPDDE 402
Query: 457 RSQTIDAILQLQNKTSEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+A+L +Q + I T+L+V S ++GC+ G+ G ++EM R T A I+
Sbjct: 403 LFPAQEALLHIQTHIIDLVPDSDNIIKTKLIVSSGEIGCLEGRDGS-LSEMERLTGAKIQ 461
Query: 515 VVGARVKLQDPHPGSSECIV---DIRGSSEHLISAHGTYQSFM----------------T 555
++ R KL + E + +I+ + + L+ +S++ +
Sbjct: 462 IL-PREKLPACVSEADELVQIEGEIKAARDALVEVTSRLRSYLYKEYFQKDTPPPISVPS 520
Query: 556 SGQSMKVQPSSYQNINP 572
+G ++ ++ +S NINP
Sbjct: 521 TGNALGMEAASPNNINP 537
>gi|302143921|emb|CBI23026.3| unnamed protein product [Vitis vinifera]
Length = 575
Score = 184 bits (467), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 141/445 (31%), Positives = 225/445 (50%), Gaps = 55/445 (12%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T YRILC K GGVIGK+G+I+KS+R+ T A I V + IPG EER+I +I+ T
Sbjct: 4 TSYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERII-------EISDT 56
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL-FGGMASDDDNENSTITARLLV 246
+ +D + M AQ+AL +HDRI+E D FG N + +R+
Sbjct: 57 RRRDPEG-------RMPQFSPAQEALFMIHDRILESDAGFG---------NGMVVSRM-- 98
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDEMVQISGKPNVAKRAL 305
VGCLLGK G +I+++R ET IR+LP D LP C ++E+VQ+ G N K A+
Sbjct: 99 ---HVGCLLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVGDVNAVKNAI 155
Query: 306 YEVSTLLHQNPRKDK----------PPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPAR 355
+S+ L ++ +D+ P FP + ++ P M P+ +S+ +R
Sbjct: 156 ANISSRLRESQHRDRSHFHGRIQSSPERFFPPDDDYSHMNNAPRRM----PIDGNSFGSR 211
Query: 356 NSS-LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
S+ L G S + G+ I +GE + +ILC K+ V+G
Sbjct: 212 VSTGLVGTRSNSFASRTSGYTLESGAAPIADNAQQFLGE---DIVFRILCPVDKVECVVG 268
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF 474
+ ++ LQ E G + V D S+E++I ++ EG + +A+L +Q +
Sbjct: 269 ESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALLHIQTRIVNL 328
Query: 475 --SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSEC 532
++ ITTRLLVPSS++GC G+ ++EMRR T A+I++V R +L G+ E
Sbjct: 329 LPDKENVITTRLLVPSSEIGCFEGRDCS-LSEMRRLTGANIQIV-PREQLPAFISGTDEL 386
Query: 533 IV---DIRGSSEHLISAHGTYQSFM 554
+ +I+ + + L+ +S++
Sbjct: 387 LEIVGEIKAARDALVEVTSRLRSYL 411
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 29/200 (14%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D V+RILCP K+ V+G++ I++ L+ E + VAD + GS E++I+I S
Sbjct: 251 DIVFRILCPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSE------ 304
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+ DD+ + P AQ+ALL + RI+ + D +N IT RLLV
Sbjct: 305 -EGPDDE---------LFP---AQEALLHIQTRIV------NLLPDKEN---VITTRLLV 342
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P++ +GC G R + +R TGANI+++P ++LP TDE+++I G+ A+ AL
Sbjct: 343 PSSEIGCFEG-RDCSLSEMRRLTGANIQIVPREQLPAFISGTDELLEIVGEIKAARDALV 401
Query: 307 EVSTLLHQNPRKDKPPSSFP 326
EV++ L ++ P P
Sbjct: 402 EVTSRLRSYLYREFFPKDMP 421
>gi|225455340|ref|XP_002272224.1| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 661
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 139/454 (30%), Positives = 224/454 (49%), Gaps = 50/454 (11%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T YRILC K GGVIGK+G+I+KS+R+ T A I V + IPG EER+I +I+ T
Sbjct: 67 TSYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERII-------EISDT 119
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED----------LFGGMASDDDNEN 237
+ +D + M AQ+AL +HDRI+E D
Sbjct: 120 RRRDPEG-------RMPQFSPAQEALFMIHDRILESDAGFGNGFGGNGDDDDDFGPRGGG 172
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDEMVQISG 296
+ + R++V VGCLLGK G +I+++R ET IR+LP D LP C ++E+VQ+ G
Sbjct: 173 NRVATRMVVSRMHVGCLLGKGGKIIEQMRIETKTQIRILPRDHNLPRCVSMSEEIVQVVG 232
Query: 297 KPNVAKRALYEVSTLLHQNPRKDK----------PPSSFPQAYGGQNFHSPPAPMADMHP 346
N K A+ +S+ L ++ +D+ P FP + ++ P M P
Sbjct: 233 DVNAVKNAIANISSRLRESQHRDRSHFHGRIQSSPERFFPPDDDYSHMNNAPRRM----P 288
Query: 347 LGNSSWPARNSS-LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCS 405
+ +S+ +R S+ L G S + G+ I +GE + +ILC
Sbjct: 289 IDGNSFGSRVSTGLVGTRSNSFASRTSGYTLESGAAPIADNAQQFLGE---DIVFRILCP 345
Query: 406 AGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAIL 465
K+ V+G+ ++ LQ E G + V D S+E++I ++ EG + +A+L
Sbjct: 346 VDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSEEGPDDELFPAQEALL 405
Query: 466 QLQNKTSEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ 523
+Q + ++ ITTRLLVPSS++GC G+ ++EMRR T A+I++V R +L
Sbjct: 406 HIQTRIVNLLPDKENVITTRLLVPSSEIGCFEGRDCS-LSEMRRLTGANIQIV-PREQLP 463
Query: 524 DPHPGSSECIV---DIRGSSEHLISAHGTYQSFM 554
G+ E + +I+ + + L+ +S++
Sbjct: 464 AFISGTDELLEIVGEIKAARDALVEVTSRLRSYL 497
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 29/200 (14%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D V+RILCP K+ V+G++ I++ L+ E + VAD + GS E++I+I S
Sbjct: 337 DIVFRILCPVDKVECVVGESDGIIELLQNEIGVDVKVADHVAGSNEQIIVITSE------ 390
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+ DD+ + P AQ+ALL + RI+ + D +N IT RLLV
Sbjct: 391 -EGPDDE---------LFP---AQEALLHIQTRIV------NLLPDKEN---VITTRLLV 428
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P++ +GC G R + +R TGANI+++P ++LP TDE+++I G+ A+ AL
Sbjct: 429 PSSEIGCFEG-RDCSLSEMRRLTGANIQIVPREQLPAFISGTDELLEIVGEIKAARDALV 487
Query: 307 EVSTLLHQNPRKDKPPSSFP 326
EV++ L ++ P P
Sbjct: 488 EVTSRLRSYLYREFFPKDMP 507
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 26/153 (16%)
Query: 390 QMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA 449
Q V S +ILC K GGVIGK G +K ++Q TGA I+V + +ER+I S
Sbjct: 59 QDSSVMVTTSYRILCHDVKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERIIEISD 118
Query: 450 F-----EGLWNPRSQTIDAILQLQNKTSE---------------------FSEKGTITTR 483
EG S +A+ + ++ E + TR
Sbjct: 119 TRRRDPEGRMPQFSPAQEALFMIHDRILESDAGFGNGFGGNGDDDDDFGPRGGGNRVATR 178
Query: 484 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
++V VGC+LG+GG +I +MR T+ IR++
Sbjct: 179 MVVSRMHVGCLLGKGGKIIEQMRIETKTQIRIL 211
>gi|356509231|ref|XP_003523354.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 644
Score = 184 bits (466), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 140/411 (34%), Positives = 215/411 (52%), Gaps = 50/411 (12%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T YRILC K GGVIGK+G+I+KS+R+ T A I V + +PG EER+I +I+ T
Sbjct: 61 TSYRILCHDLKAGGVIGKSGSIIKSIRQHTGAWINVHELMPGDEERII-------EISDT 113
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMA------SDDDNENSTIT 241
+ +D E + S P AQ+ALL +H+RI+E D G+A I
Sbjct: 114 RRRD----PEGRMPSFSP---AQEALLLIHERILESDAAFGVAEEDEEYGGRGGGRDRIA 166
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDEMVQISGKPNV 300
RL+V VGCLLGK G +I+++R ET IR+LP D LP C ++E+VQ+ G N
Sbjct: 167 TRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHNLPRCVSMSEEIVQVVGNVNA 226
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPP---APMADMHP----------L 347
K AL +S+ L ++ +D+ S F +G HSP +P D P +
Sbjct: 227 VKNALVIISSRLRESQHRDR--SHF---HG--RVHSPERFFSPDDDYVPHVTSGSRRSSV 279
Query: 348 GNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAG 407
+S+ +R S+ + + Y +P G+ + G GE E +ILC
Sbjct: 280 DGASFGSRGSNTNSRNNNHPSLNYAMEP---GAAPVVDDAQGFYGE---ELVFRILCPIE 333
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
K+ +IG+ V+ LQ E G + V D SDE++I ++ EG + +A+L +
Sbjct: 334 KVDRIIGESEGIVEFLQNEVGVDVKVTDPVGGSDEQIIIITSEEGPDDELFPAQEALLHV 393
Query: 468 QNKTSE--FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
Q + + + TITTRL+VPSS++ C+ G+ ++E+RR T A+I+++
Sbjct: 394 QTRIVDLVLDKDNTITTRLVVPSSEIECLDGKDVS-LSEIRRLTGANIQIL 443
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 109/194 (56%), Gaps = 31/194 (15%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V+RILCP K+ +IG++ IV+ L+ E + V D + GS+E++III S
Sbjct: 323 ELVFRILCPIEKVDRIIGESEGIVEFLQNEVGVDVKVTDPVGGSDEQIIIITSE------ 376
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+ DD+ + P AQ+ALL V RI++ + D DN TIT RL+V
Sbjct: 377 -EGPDDE---------LFP---AQEALLHVQTRIVD------LVLDKDN---TITTRLVV 414
Query: 247 PNNMVGCLLGKRGDV-IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
P++ + CL GK DV + +R TGANI++LP D LP C TDE+VQI G+ A+ A+
Sbjct: 415 PSSEIECLDGK--DVSLSEIRRLTGANIQILPRDELPLCVAKTDELVQIVGEIKAARDAV 472
Query: 306 YEVSTLLHQNPRKD 319
EV++ L +D
Sbjct: 473 VEVTSRLRSYLYRD 486
>gi|356526304|ref|XP_003531758.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Glycine
max]
Length = 565
Score = 183 bits (464), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 140/430 (32%), Positives = 210/430 (48%), Gaps = 94/430 (21%)
Query: 112 SNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE 171
+N+S+++ D V+RI+CP+ K V G+ AKI V D + G+E
Sbjct: 3 NNNSKKRRHAPPAAPDAVFRIVCPAAKTADVAAIGGD---------GAKILVEDLV-GAE 52
Query: 172 ERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMAS 231
ERV++I D+SAA Q AL++V +R +
Sbjct: 53 ERVVVIVG------------DESAA-------------QVALIRVLERTM---------- 77
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
D++ +NST++ +L+ P+ VGC+LG+ G +++++R ++GA+IRVLP D+ DE
Sbjct: 78 DEETKNSTVSCKLVAPSYQVGCVLGRGGKIVEKIRQDSGAHIRVLPKDQP--PPPPGDEF 135
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSS 351
+QI+G K+A+ VS LH+N PS G ++PP D H G S
Sbjct: 136 IQITGNFGAVKKAVLSVSACLHENNYGAFKPS-------GGGSYAPP----DHHSRGAYS 184
Query: 352 WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGG 411
A +SS H M V E K+LC K+G
Sbjct: 185 ESAGHSS-HRM------------------------------FVEEEVVFKLLCRHDKVGS 213
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKT 471
+IGKGG V+ LQ ETGASI + +A DSDERV+ SA E S +A++++ +
Sbjct: 214 LIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISAQETSEQKHSPAQEAVIRVHCRL 273
Query: 472 SE--FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS 529
+E F + +LLV S +VGC+LG+GG VI+EMRR T A IR+ K Q +
Sbjct: 274 TEIGFEPSAAVVAKLLVRSPQVGCLLGKGGLVISEMRRATGASIRIFS---KEQIKYISQ 330
Query: 530 SECIVDIRGS 539
+E +V + GS
Sbjct: 331 NEEVVQVIGS 340
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 111/207 (53%), Gaps = 29/207 (14%)
Query: 108 KGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI 167
+G +S S+ S + V+++LC K+G +IGK G++V++L+ ET A I + +
Sbjct: 180 RGAYSESAGHSSHRMFVEEEVVFKLLCRHDKVGSLIGKGGSVVRALQNETGASIQIVEAG 239
Query: 168 PGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
P S+ERV++I SA ET S + H AQ+A+++VH R+ E
Sbjct: 240 PDSDERVVVI----------------SAQET---SEQKHSPAQEAVIRVHCRLTEIGF-- 278
Query: 228 GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMN 287
++ + A+LLV + VGCLLGK G VI +R TGA+IR+ +++ + N
Sbjct: 279 -------EPSAAVVAKLLVRSPQVGCLLGKGGLVISEMRRATGASIRIFSKEQIKYISQN 331
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQ 314
+E+VQ+ G + AL+ ++ + +
Sbjct: 332 -EEVVQVIGSLQSVQDALFHITNRIRE 357
>gi|356557593|ref|XP_003547100.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 710
Score = 182 bits (462), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 134/425 (31%), Positives = 215/425 (50%), Gaps = 60/425 (14%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+LC + +IGGVIGK+G+++K+L++ T AKI + D +R+I++ + K
Sbjct: 47 FRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALSGKILL 106
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
++++ +K AQ+ALLKV DRI+ GG D + ++ RL+
Sbjct: 107 RNEEVIEVSK---------AQEALLKVFDRILRS---GGGDRSVDVGDRVMSCRLVADAA 154
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G ++GK G V++R++ ETG IRVL D LP CA +DE+++I G+ + K+AL VS
Sbjct: 155 QAGSVIGKGGKVVERIKKETGCKIRVL-TDDLPLCASASDEIIEIEGRVSSVKKALVAVS 213
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMG 369
L +D P + G + + D P S+ R +L P
Sbjct: 214 QRL-----QDCHPVDRTKMMGSKPYEIVQYEALDALPRATSTAAPR-VTLTAAPRGTLTA 267
Query: 370 GYGDQPSRMG----------------SGSINSCPPGQMGEVSA--------EFSMKILCS 405
+ + + I+S P ++ VS+ E + +ILCS
Sbjct: 268 VQHETVDHLLLRSSALSTLSSSSNSYATRIHSLPT-EVNRVSSLEPKALKQEVTFRILCS 326
Query: 406 AGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ----TI 461
++GGVIGKGG V+ LQ ETGA+I + A + ++R+I +A E NP S+
Sbjct: 327 NDRVGGVIGKGGNIVRALQSETGATISIGPAVAECEDRLITIAASE---NPESRYSPAQK 383
Query: 462 DAILQLQNKTSEFSEKG---------TITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
A+L EKG +T RL+VPSS+VGC++G+GG +++EMR+ T A+
Sbjct: 384 AAVLVFSRSIEVGFEKGLDSGLNKGSIVTVRLVVPSSQVGCLIGKGGVIVSEMRKATGAN 443
Query: 513 IRVVG 517
IR++G
Sbjct: 444 IRIIG 448
Score = 126 bits (316), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 82/234 (35%), Positives = 125/234 (53%), Gaps = 21/234 (8%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ +RILC + ++GGVIGK GNIV++L+ ET A I++ + E+R+I I
Sbjct: 318 EVTFRILCSNDRVGGVIGKGGNIVRALQSETGATISIGPAVAECEDRLITI--------- 368
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+A+E + P AQ A + V R IE G+ S N+ S +T RL+V
Sbjct: 369 -------AASENPESRYSP---AQKAAVLVFSRSIEVGFEKGLDSGL-NKGSIVTVRLVV 417
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P++ VGCL+GK G ++ +R TGANIR++ D++P CA + D++VQISG+ + + ALY
Sbjct: 418 PSSQVGCLIGKGGVIVSEMRKATGANIRIIGTDQVPKCASDNDQVVQISGEFSSVQDALY 477
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFH-SPPAPMADMHPLGNSSWPARNSSL 359
L N S+ ++ SP D+ PLG+ PA + SL
Sbjct: 478 NAMGRLRDNLFVSTQNSAGTRSLSSLRVDTSPYGRQQDVVPLGSQLPPATSHSL 531
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 89/163 (54%), Gaps = 29/163 (17%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRA---SAFEGLW 454
+ ++LC+A +IGGVIGK G +K LQQ TGA I +EDAP + +R+I +A G
Sbjct: 45 VAFRLLCNASRIGGVIGKSGSVIKTLQQSTGAKIRIEDAPQELPDRIILVIADAALSGKI 104
Query: 455 NPRSQTI-------DAILQL---------QNKTSEFSEKGTITTRLLVPSSKVGCILGQG 498
R++ + +A+L++ +++ + ++ ++ RL+ +++ G ++G+G
Sbjct: 105 LLRNEEVIEVSKAQEALLKVFDRILRSGGGDRSVDVGDR-VMSCRLVADAAQAGSVIGKG 163
Query: 499 GHVINEMRRRTQADIRVVGARVKLQDPHP---GSSECIVDIRG 538
G V+ +++ T IRV L D P +S+ I++I G
Sbjct: 164 GKVVERIKKETGCKIRV------LTDDLPLCASASDEIIEIEG 200
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 40/74 (54%), Gaps = 7/74 (9%)
Query: 484 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
++VP + C+ G+ G + +R+ + GA V + +P PG+S+ I+ I G+ +
Sbjct: 643 IVVPDDTIDCVYGENGSNLARLRQ-------ISGANVVVHEPRPGTSDRIIVISGTPDET 695
Query: 544 ISAHGTYQSFMTSG 557
+A Q+F+ SG
Sbjct: 696 QAAQSLLQAFILSG 709
>gi|356519471|ref|XP_003528396.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 591
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 128/401 (31%), Positives = 212/401 (52%), Gaps = 40/401 (9%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+LC + ++G +IGK+G ++K+L+E T AKI + D P S +RVI++ S+P
Sbjct: 27 FRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILV-SAP-------- 77
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
AA + E AQ ALLKV DR+++ + + + ++ RLL +
Sbjct: 78 -----AAASDGEV----STAQVALLKVFDRVLD---VAAETAGTEVGDRVVSCRLLADTS 125
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VG ++GK G V++++R +TG IRVL + LP C +DE+V++ G+ K+AL VS
Sbjct: 126 QVGAVIGKAGKVVEKIRMDTGCKIRVLN-EGLPACTAPSDEIVEVEGQLTSVKKALVAVS 184
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMG 369
L P D+ + + Y + P+ + L R+S+L + S G
Sbjct: 185 GCLQDCPPPDRTKMTGSRHYEVVRSETCSVPLESLTNLHIDRRLQRSSTLSTL-SNRSNG 243
Query: 370 GYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGA 429
P S +N + E + +I+CS ++G VIGKGG V+ LQ E+GA
Sbjct: 244 NASGAPKL--SAEVNRVSALDPKALQQEVTFRIICSNDRVGAVIGKGGSIVRALQNESGA 301
Query: 430 SIHVEDAPTDSDERVIRASAFEGLWNPRSQ---TIDAILQLQNKTSEFS-EKGT------ 479
I + + ++R++ +A E NP S+ A++ + +K+ E EKG
Sbjct: 302 IISFGPSLVECEDRLVTITASE--QNPESRYSPAQKAVVLVFSKSVEAGVEKGLDMGSKK 359
Query: 480 ---ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
+T +L+VPS++VGC+LG+GG +++EMR+ T A+IRV+G
Sbjct: 360 ESYVTAQLVVPSNQVGCLLGKGGAIVSEMRKATGANIRVIG 400
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/326 (28%), Positives = 157/326 (48%), Gaps = 34/326 (10%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ +RI+C + ++G VIGK G+IV++L+ E+ A I+ ++ E+R++ I
Sbjct: 269 EVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISFGPSLVECEDRLVTI--------- 319
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+A+E ES + AQ A++ V + +E + G+ E S +TA+L+V
Sbjct: 320 -------TASEQNPESR--YSPAQKAVVLVFSKSVEAGVEKGLDMGSKKE-SYVTAQLVV 369
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+N VGCLLGK G ++ +R TGANIRV+ D++P C + D++VQISG+ + + A+Y
Sbjct: 370 PSNQVGCLLGKGGAIVSEMRKATGANIRVIGNDKVPKCVSDNDQLVQISGEFSNVQAAIY 429
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTP 366
+ L N F S + ++ P S SL G+ +
Sbjct: 430 NATGRLRDNL--------FVSTQNSGGARSLSSVLSGGKPTVAVSLSLNRHSLPGLQAPQ 481
Query: 367 WMGGYGDQPSRMGSGSINS------CPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNV 420
+ G + + S + S G + +++I IG V G+ G N+
Sbjct: 482 TVAGINSRVTNGVSRGLTSQKGGLELVSGSKTAIVTNTTVQIAVPDDVIGSVYGENGSNL 541
Query: 421 KQLQQETGASIHV-EDAPTDSDERVI 445
+L+Q +GA + V E P SD +I
Sbjct: 542 ARLRQISGAKVIVHEPRPGTSDRTII 567
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/129 (34%), Positives = 73/129 (56%), Gaps = 11/129 (8%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPR 457
+ ++LC A ++G +IGK G +K LQ+ TGA I +EDAP DS +RVI SA +
Sbjct: 25 VTFRLLCHASRVGAIIGKSGVLIKTLQEATGAKIRIEDAPPDSPDRVILVSAPAAASDGE 84
Query: 458 SQT--------IDAILQLQNKT--SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
T D +L + +T +E ++ ++ RLL +S+VG ++G+ G V+ ++R
Sbjct: 85 VSTAQVALLKVFDRVLDVAAETAGTEVGDR-VVSCRLLADTSQVGAVIGKAGKVVEKIRM 143
Query: 508 RTQADIRVV 516
T IRV+
Sbjct: 144 DTGCKIRVL 152
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T ++ VP +G + G+ G + +R+ + GA+V + +P PG+S+ + I G+
Sbjct: 520 TVQIAVPDDVIGSVYGENGSNLARLRQ-------ISGAKVIVHEPRPGTSDRTIIISGTP 572
Query: 541 EHLISAHGTYQSFMTSGQS 559
+ +A Q+F+ +G S
Sbjct: 573 DETRAAQSLLQAFILAGSS 591
>gi|224135123|ref|XP_002321989.1| predicted protein [Populus trichocarpa]
gi|222868985|gb|EEF06116.1| predicted protein [Populus trichocarpa]
Length = 685
Score = 181 bits (459), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 160/542 (29%), Positives = 261/542 (48%), Gaps = 89/542 (16%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T YRILC K GGVIGK+G+I+KS+R+ T A I V + IPG EER+I +I+ T
Sbjct: 86 TSYRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERII-------EISDT 138
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASD-----DDNE-----N 237
+ +D E + S P AQ+AL +HDRI+E DL G+ S +++E
Sbjct: 139 RRRD----PEGRMPSFSP---AQEALFLIHDRILENDLQYGVVSSGAGGFEEDEYVGRGG 191
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDEMVQISG 296
+ + RL+V VGCLLGK G +I+++R ET IR+LP D LP C ++E+VQ+ G
Sbjct: 192 NRVATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSVSEEIVQVIG 251
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFH----SPPAPMADMH-PLGNSS 351
N K A+ +S+ L ++ +D+ +FH SP + D + P N+
Sbjct: 252 DVNAVKNAVAIISSRLRESQHRDR-----------SHFHGRVQSPERFLDDDYVPHMNT- 299
Query: 352 WPARNSSLHGMPSTPWMGGYGDQPS--RMGSGSINSCPPGQMGEVSA------------- 396
R SS+ G PS +G + S + + +S PG + A
Sbjct: 300 ---RRSSMDGPPS------FGSRLSGPNYRNNNYSSRAPGFPVDAGADPNADSAQPFYVE 350
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+ +ILC K+ V+G+ V LQ E G + V D + SDE++I + EG +
Sbjct: 351 DLVFRILCPIDKVNRVVGESDGLVDLLQNEIGVDVKVADPVSGSDEQIITICSEEGPDDE 410
Query: 457 RSQTIDAILQLQNKTSEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+A+L +Q + + + ITTRLLVPSS++GC+ G+ G ++EM T A I
Sbjct: 411 LFPAQEALLHIQTRIVDLVADKDNIITTRLLVPSSEIGCLEGRDGS-LSEMESLTGATIE 469
Query: 515 VVGARVKLQDPHPGSSECIV---DIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQNIN 571
++ + L G+ E + +++ + + L+ +S++ K P +
Sbjct: 470 ILPKEM-LPTYLSGTDELVQIQGEVKAARDALVEVTSRLRSYLYKDVFQKDLPPTVSAPG 528
Query: 572 PQQSS--CQTMSSHQ--------------SSYQNMNTQQSPYHRVNAQQSPYQNINPQQS 615
P ++ Q SS+ ++YQN+ + +P +A+ S + + +S
Sbjct: 529 PAGTAGGLQAASSNNPTPAREGHSGGDPPATYQNVQSASTPQPSKDARGSSAETVKQNES 588
Query: 616 SY 617
+
Sbjct: 589 EH 590
>gi|297792661|ref|XP_002864215.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
gi|297310050|gb|EFH40474.1| hypothetical protein ARALYDRAFT_495374 [Arabidopsis lyrata subsp.
lyrata]
Length = 652
Score = 180 bits (457), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 154/460 (33%), Positives = 226/460 (49%), Gaps = 53/460 (11%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A T YRILC K GGVIGK+G I+KS+R+ T A I V + +PG ER+I +I+
Sbjct: 67 ATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDVERII-------EIS 119
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIE-EDLFG-GMASDDDNEN------ 237
+ +D D M AQ+AL VHDRI+E E FG G A ++ E+
Sbjct: 120 DNRRRDPDG-------RMPSFSPAQEALFNVHDRILESEPQFGYGGAQPEEEEDYGGVRP 172
Query: 238 --STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD-RLPPCAMNTDEMVQI 294
+ RL+V VGCLLGK G +I+++R ET +IR+LP + LP C ++E+VQI
Sbjct: 173 GGGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQI 232
Query: 295 SGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPA 354
G+ + K AL VS+ L ++ +D+ + G++ HSP A G+ P
Sbjct: 233 VGELSAVKNALLIVSSRLRESQHRDR------SNFQGRS-HSPERQFA---AAGDDYIPQ 282
Query: 355 RNSSLHGMPSTPWMGGY-GDQPSRMGSGSINSCPPGQMGE--VSAEFSMKILCSAGKIGG 411
R S P G Y + S S P +GE + E +ILC A KI
Sbjct: 283 RRQSSDRFPR----GNYRNNNFSSRQSNYAEEAPAVPVGENVYTEELVFQILCPADKIVR 338
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKT 471
V+G+ + LQ E G + V D T SDE++I S+ E +P +A+L +Q +
Sbjct: 339 VVGESQGILDLLQNEIGVDVRVSDPVTGSDEQIITISSEEAPDDPFFPAQEALLHIQTQI 398
Query: 472 SEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS 529
+ + ITTRLLV S C+ G+ G V +E+ R T ++++ AR ++ P S
Sbjct: 399 IDLLPDKDNLITTRLLVSSRDSVCLEGKAGSV-SEISRLTGTSVQIL-AREEI--PRCAS 454
Query: 530 SECIV-----DIRGSSEHLISAHGTYQSFMTSGQSMKVQP 564
+V DIR + + L+ +S M S K P
Sbjct: 455 INDVVIQITGDIRAARDALVELTLLLRSHMFKELSQKETP 494
>gi|8809595|dbj|BAA97146.1| RNA-binding protein-like [Arabidopsis thaliana]
Length = 660
Score = 180 bits (456), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 160/501 (31%), Positives = 240/501 (47%), Gaps = 63/501 (12%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A T YRILC K GGVIGK+G I+KS+R+ T A I V + +PG ER+I +I+
Sbjct: 66 ATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERII-------EIS 118
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL---FGGMASDDDNE------ 236
+ +D D M AQ+AL VHDRI+E + +GG +++ +
Sbjct: 119 DNRRRDPDG-------RMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRP 171
Query: 237 -NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD-RLPPCAMNTDEMVQI 294
+ RL+V VGCLLGK G +I+++R ET +IR+LP + LP C ++E+VQI
Sbjct: 172 GGGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQI 231
Query: 295 SGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWP- 353
G+ N K AL VS+ L ++ +D+ + G++ HSP A G+ P
Sbjct: 232 VGELNAVKNALAIVSSRLRESQHRDR------SNFQGRS-HSPERSFA---AAGDDYMPQ 281
Query: 354 ARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGE--VSAEFSMKILCSAGKIGG 411
R S P + + S S P +GE S E +ILC A KI
Sbjct: 282 LRRQSSDRFPRGNF---RNNNFSSRQSNYAEEAPAVPVGENVYSEELVFQILCPADKIVR 338
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKT 471
V+G+ + LQ E G + V D SDE++I S+ E +P +A+L +Q +
Sbjct: 339 VVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQI 398
Query: 472 SEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS 529
+ + ITTRLLVPS C+ G+ G V +E+ R T ++++ AR ++ P S
Sbjct: 399 IDLIPDKDNLITTRLLVPSRDSICLEGKAGSV-SEISRLTGTSVQIL-AREEI--PRCAS 454
Query: 530 SECIV-----DIRGSSEHLISAHGTYQSFMTSGQSMK-VQPSSYQNINPQQ--------- 574
+V +IR + E L+ +S M S K P+S P +
Sbjct: 455 INDVVIQITGEIRAAREALVELTLLLRSHMFKELSQKETPPASTSTTGPLEGVAGVMEVA 514
Query: 575 SSCQTMSSHQS-SYQNMNTQQ 594
SS T+ S + + N+N QQ
Sbjct: 515 SSNNTIQSREGPTSSNLNLQQ 535
>gi|449448150|ref|XP_004141829.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 179 bits (455), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 129/439 (29%), Positives = 224/439 (51%), Gaps = 50/439 (11%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYS-SP 181
S P+DT++R+LCP+ K+ +I++ LR+ A+I V + +P EE V++I + SP
Sbjct: 63 SSPSDTLFRLLCPASKVS-------SILRHLRDIPGARIHVDEPLPSCEECVLVILAGSP 115
Query: 182 TKIAKTQNKDD----------DSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMAS 231
+K A T +D + +++T + AQ ALL+ + I+ + G
Sbjct: 116 SKPAHTNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDSGENQ 175
Query: 232 DDDNENST---------------ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVL 276
+ +N+ + RLL P++ VG +LG+ G ++++R E+ A++++
Sbjct: 176 EIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKIF 235
Query: 277 PADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHS 336
P D+ P CA DE++QISG + +AL VS+ L +PR D SS ++ G + H+
Sbjct: 236 PKDQNPACASPQDELIQISGNFSAVMKALSSVSSCLQDSPRVDSSNSSSTKSLGPTS-HA 294
Query: 337 PPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSA 396
+ D P + + +++ + S Y P +G+ G +
Sbjct: 295 SSMSVQDEEPSPRRRYGSHHNADYRSRS------YSSIPGHENAGA------GPRAAMEE 342
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+ ++LC K+G +IGKGG V+ LQ ETGASI + D P D DER++ SA E L
Sbjct: 343 DVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVDTP-DLDERLVVISARETLEQT 401
Query: 457 RSQTIDAILQLQNKTSE--FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
S +A+++ + +E + + RLLV ++G ++G+GGH+IN+MRR T I+
Sbjct: 402 YSPAQEAVIRAHCRIAEIGYEPGAAVVARLLVHGQQIGYLVGRGGHIINDMRRGTGTSIQ 461
Query: 515 VVGARVKLQDPHPGSSECI 533
+ R ++Q+ P S E +
Sbjct: 462 IF-PRDQIQNGGPMSDEVV 479
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 159/384 (41%), Gaps = 101/384 (26%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D V+R+LC K+G +IGK G +V++L+ ET A I + DT P +ER+++I
Sbjct: 343 DVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVDT-PDLDERLVVI--------- 392
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
SA ET +++ P AQ+A+++ H RI E G A + ARLLV
Sbjct: 393 -------SARETLEQTYSP---AQEAVIRAHCRIAEIGYEPGAA---------VVARLLV 433
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
+G L+G+ G +I +R TG +I++ P D++ +DE+VQ+ G + AL+
Sbjct: 434 HGQQIGYLVGRGGHIINDMRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALF 493
Query: 307 EVSTLL-------------------HQNPRKDKPPSSFPQAYGGQNFHSP---------- 337
++ + + +P + PP F G N HSP
Sbjct: 494 HITNRIRDTFFPMRPHVPNFNNHPPYLSPHPETPPPLF---RPGSNAHSPGYYPSQAGGL 550
Query: 338 ---PAPMADMHPLGNSSWPARNSSLHG---MPSTPWMGGYGDQPSRMGSGSINS-CPPGQ 390
P HPL + N S G M P+ G R G GS P
Sbjct: 551 RGTERPPYHSHPLDHQPAYPHNVSFGGGNNMDGVPYPHGM----ERPGPGSFERPSPRSW 606
Query: 391 MGEVSAEF----------------------------SMKILCSAGKIGGVIGKGGFNVKQ 422
+VS+E SM+++ I + G+ N+
Sbjct: 607 TSQVSSEIPKGPTDGFGMVSRNEPYGSGGPHFMGGTSMEMVIPQTLICHIYGENNNNIAH 666
Query: 423 LQQETGASIHVEDA-PTDSDERVI 445
+QQ +GA + V DA P D +VI
Sbjct: 667 VQQISGAMLVVHDAKPGMFDGKVI 690
Score = 40.0 bits (92), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 106 IKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
I+K N ++ ++ G V R+L PS ++G V+G+ G V+ +R+E+ A + +
Sbjct: 177 IQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKI 234
>gi|30696273|ref|NP_200118.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|17065220|gb|AAL32764.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|30725478|gb|AAP37761.1| At5g53060 [Arabidopsis thaliana]
gi|332008915|gb|AED96298.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 652
Score = 179 bits (453), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 160/501 (31%), Positives = 240/501 (47%), Gaps = 63/501 (12%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A T YRILC K GGVIGK+G I+KS+R+ T A I V + +PG ER+I +I+
Sbjct: 66 ATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERII-------EIS 118
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL---FGGMASDDDNE------ 236
+ +D D M AQ+AL VHDRI+E + +GG +++ +
Sbjct: 119 DNRRRDPDG-------RMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRP 171
Query: 237 -NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD-RLPPCAMNTDEMVQI 294
+ RL+V VGCLLGK G +I+++R ET +IR+LP + LP C ++E+VQI
Sbjct: 172 GGGRVVTRLVVSRMHVGCLLGKGGKIIEQMRIETKTHIRILPRESNLPRCVSLSEEIVQI 231
Query: 295 SGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWP- 353
G+ N K AL VS+ L ++ +D+ + G++ HSP A G+ P
Sbjct: 232 VGELNAVKNALAIVSSRLRESQHRDR------SNFQGRS-HSPERSFA---AAGDDYMPQ 281
Query: 354 ARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGE--VSAEFSMKILCSAGKIGG 411
R S P + + S S P +GE S E +ILC A KI
Sbjct: 282 LRRQSSDRFPRGNF---RNNNFSSRQSNYAEEAPAVPVGENVYSEELVFQILCPADKIVR 338
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKT 471
V+G+ + LQ E G + V D SDE++I S+ E +P +A+L +Q +
Sbjct: 339 VVGESQGIIDLLQNEIGVDVRVSDPVAGSDEQIITISSEEAPDDPFFPAQEALLHIQTQI 398
Query: 472 SEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS 529
+ + ITTRLLVPS C+ G+ G V +E+ R T ++++ AR ++ P S
Sbjct: 399 IDLIPDKDNLITTRLLVPSRDSICLEGKAGSV-SEISRLTGTSVQIL-AREEI--PRCAS 454
Query: 530 SECIV-----DIRGSSEHLISAHGTYQSFMTSGQSMK-VQPSSYQNINPQQ--------- 574
+V +IR + E L+ +S M S K P+S P +
Sbjct: 455 INDVVIQITGEIRAAREALVELTLLLRSHMFKELSQKETPPASTSTTGPLEGVAGVMEVA 514
Query: 575 SSCQTMSSHQS-SYQNMNTQQ 594
SS T+ S + + N+N QQ
Sbjct: 515 SSNNTIQSREGPTSSNLNLQQ 535
>gi|449492545|ref|XP_004159029.1| PREDICTED: KH domain-containing protein At4g18375-like [Cucumis
sativus]
Length = 716
Score = 177 bits (450), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 128/439 (29%), Positives = 223/439 (50%), Gaps = 50/439 (11%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYS-SP 181
S P+DT++R+LCP+ K+ +I++ LR+ A+I V + +P EE V++I + SP
Sbjct: 63 SSPSDTLFRLLCPASKVS-------SILRHLRDIPGARIHVDEPLPSCEECVLVILAGSP 115
Query: 182 TKIAKTQNKDD----------DSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMAS 231
+K T +D + +++T + AQ ALL+ + I+ + G
Sbjct: 116 SKPTHTNPGNDREFREHDVHRNVSSDTVAGDSDERSQAQQALLRTFESIVRMNEDSGENQ 175
Query: 232 DDDNENST---------------ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVL 276
+ +N+ + RLL P++ VG +LG+ G ++++R E+ A++++
Sbjct: 176 EIQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKIF 235
Query: 277 PADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHS 336
P D+ P CA DE++QISG + +AL VS+ L +PR D SS ++ G + H+
Sbjct: 236 PKDQNPACASPQDELIQISGNFSAVMKALSSVSSCLQDSPRVDSSNSSSTKSLGPTS-HA 294
Query: 337 PPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSA 396
+ D P + + +++ + S Y P +G+ G +
Sbjct: 295 SSMSVQDEEPSPRRRYGSHHNADYRSRS------YSSIPGHENAGA------GPRAAMEE 342
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+ ++LC K+G +IGKGG V+ LQ ETGASI + D P D DER++ SA E L
Sbjct: 343 DVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVDTP-DLDERLVVISARETLEQT 401
Query: 457 RSQTIDAILQLQNKTSE--FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
S +A+++ + +E + + RLLV ++G ++G+GGH+IN+MRR T I+
Sbjct: 402 YSPAQEAVIRAHCRIAEIGYEPGAAVVARLLVHGQQIGYLVGRGGHIINDMRRGTGTSIQ 461
Query: 515 VVGARVKLQDPHPGSSECI 533
+ R ++Q+ P S E +
Sbjct: 462 IF-PRDQIQNGGPMSDEVV 479
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 103/384 (26%), Positives = 159/384 (41%), Gaps = 101/384 (26%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D V+R+LC K+G +IGK G +V++L+ ET A I + DT P +ER+++I
Sbjct: 343 DVVFRLLCQPDKVGSLIGKGGTVVRALQNETGASIKIVDT-PDLDERLVVI--------- 392
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
SA ET +++ P AQ+A+++ H RI E G A + ARLLV
Sbjct: 393 -------SARETLEQTYSP---AQEAVIRAHCRIAEIGYEPGAA---------VVARLLV 433
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
+G L+G+ G +I +R TG +I++ P D++ +DE+VQ+ G + AL+
Sbjct: 434 HGQQIGYLVGRGGHIINDMRRGTGTSIQIFPRDQIQNGGPMSDEVVQVIGNLPSVQDALF 493
Query: 307 EVSTLL-------------------HQNPRKDKPPSSFPQAYGGQNFHSP---------- 337
++ + + +P + PP F G N HSP
Sbjct: 494 HITNRIRDTFFPMRPHVPNFNNHPPYLSPHPETPPPLF---RPGSNAHSPGYYPSQAGGL 550
Query: 338 ---PAPMADMHPLGNSSWPARNSSLHG---MPSTPWMGGYGDQPSRMGSGSINS-CPPGQ 390
P HPL + N S G M P+ G R G GS P
Sbjct: 551 RGTERPPYHSHPLDHQPAYPHNVSFGGGNNMDGVPYPHGM----ERPGPGSFERPSPRSW 606
Query: 391 MGEVSAEF----------------------------SMKILCSAGKIGGVIGKGGFNVKQ 422
+VS+E SM+++ I + G+ N+
Sbjct: 607 TSQVSSEIPKGPTDGFGMVSRNEPYGSGGPHFMGGTSMEMVIPQTLICHIYGENNNNIAH 666
Query: 423 LQQETGASIHVEDA-PTDSDERVI 445
+QQ +GA + V DA P D +VI
Sbjct: 667 VQQISGAMLVVHDAKPGMFDGKVI 690
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 33/58 (56%)
Query: 106 IKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
I+K N ++ ++ G V R+L PS ++G V+G+ G V+ +R+E+ A + +
Sbjct: 177 IQKKNADSAPNDRISGGETDGLVVCRLLAPSHQVGRVLGRGGKTVEKIRQESMAHVKI 234
>gi|224118310|ref|XP_002317787.1| predicted protein [Populus trichocarpa]
gi|222858460|gb|EEE96007.1| predicted protein [Populus trichocarpa]
Length = 655
Score = 177 bits (448), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 146/451 (32%), Positives = 225/451 (49%), Gaps = 53/451 (11%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
YRILC K GGVIGK+G+I+KS+R+ T A I V + IPG EER+I +I+ T+
Sbjct: 62 YRILCHDMKAGGVIGKSGSIIKSIRQHTGAWINVHELIPGDEERII-------EISDTRR 114
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL--------FGGMASDD--DNENST 239
+D E + S P AQ+AL +HDRI+E DL GG+ D+ +
Sbjct: 115 RD----PEGRMPSFSP---AQEALFLIHDRILENDLQYGVVSSGVGGLEEDEYVGRGGNR 167
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDEMVQISGKP 298
+ RL+V VGCLLGK G +I+++R ET IR+LP D LP C ++E+VQ+ G
Sbjct: 168 VATRLVVSRMHVGCLLGKGGKIIEQMRMETKTQIRILPRDHTLPRCVSMSEEIVQVVGDV 227
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMH-PLGNSSWPARNS 357
+ K A+ +S+ L ++ +D+ S F +G HSP D + P N+ R S
Sbjct: 228 SAVKNAVAIISSRLRESQHRDR--SHF---HG--RVHSPERLFDDDYAPHMNT----RRS 276
Query: 358 SLHGMPS----TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSM-----KILCSAGK 408
S+ G PS P + S SG + + + F + +ILC K
Sbjct: 277 SMDGPPSFGSRVPGSNYRNNNYSSRASGFAADAGADPIADSAQPFYVEDLVFRILCPIDK 336
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQ 468
+ V+G+ V LQ E G + V D + SDE++I + EG + +A+L +Q
Sbjct: 337 LNRVVGESDGIVDLLQNEIGVDVKVADPVSGSDEQIITIFSEEGPDDELFPAQEALLHIQ 396
Query: 469 NKTSEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPH 526
+ + TTRLLV SS++GC+ G+ ++E+ R T A I ++ + KL
Sbjct: 397 TRIVDLVPDNDHITTTRLLVRSSEIGCLEGRDAS-LSEIERLTGATIEIL-PKEKLPSYL 454
Query: 527 PGSSECIV---DIRGSSEHLISAHGTYQSFM 554
G E + +IR + + L+ +S++
Sbjct: 455 SGIDEIVQIEGEIRAARDALVEVTSRLRSYI 485
>gi|357159179|ref|XP_003578365.1| PREDICTED: poly(rC)-binding protein 2-like [Brachypodium
distachyon]
Length = 629
Score = 174 bits (441), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/317 (35%), Positives = 164/317 (51%), Gaps = 28/317 (8%)
Query: 209 AQDALLKVHDRIIEEDLFGGMASDDDNE---NSTITARLLVPNNMVGCLLGKRGDVIQRL 265
A A ++V +R++ + G A + + E + R+L VGC+LGK G ++R+
Sbjct: 78 APAAAVRVWERVVGHRVGGDDAGEGEEEKEVTGVVGCRMLAAGGQVGCVLGKGGKTVERM 137
Query: 266 RSETGANIRVLP-ADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSS 324
R E+GA IRV D++PPCA+ DE++ ISG + A++AL VST L NPR + S
Sbjct: 138 RQESGAQIRVFRNKDQVPPCALQGDELIHISGSFSAARKALLLVSTCLQDNPRLETSNFS 197
Query: 325 FPQAYG--GQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGS 382
+++G G PP D H S P H + S
Sbjct: 198 TGRSFGPPGSGVGCPPG--VDSHSQ-RSYLPPHIPDYHAR-----------------NFS 237
Query: 383 INSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDE 442
N PG + E +++C +GG+IGKGG ++ LQ +TGAS+ V DA DSDE
Sbjct: 238 SNVAAPGPRFFIEQEIVFRMICLNEMVGGIIGKGGATIRALQSDTGASVKVIDAVADSDE 297
Query: 443 RVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS--EKGTITTRLLVPSSKVGCILGQGGH 500
RVI SA E S DA+L++ ++ SE S + + RLLVPS +GC+LG+GG
Sbjct: 298 RVIVISARENSEMMHSPAQDAVLRVYSRISEASMDKSSAVPARLLVPSQHIGCLLGKGGS 357
Query: 501 VINEMRRRTQADIRVVG 517
+I EMR T A IR+ G
Sbjct: 358 IIAEMRNVTGASIRIFG 374
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 126/458 (27%), Positives = 200/458 (43%), Gaps = 103/458 (22%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V+R++C + +GG+IGK G +++L+ +T A + V D + S+ERVI+I
Sbjct: 252 EIVFRMICLNEMVGGIIGKGGATIRALQSDTGASVKVIDAVADSDERVIVI--------- 302
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+A E M H AQDA+L+V+ RI E + +++S + ARLLV
Sbjct: 303 --------SARENSEMM--HSPAQDAVLRVYSRISEASM---------DKSSAVPARLLV 343
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+ +GCLLGK G +I +R+ TGA+IR+ +++P CA DE+VQ++G + AL
Sbjct: 344 PSQHIGCLLGKGGSIIAEMRNVTGASIRIFGNEQIPRCAQRNDELVQVTGNFQSIQDALL 403
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTP 366
++ + +D P GG + + PPA HP P +S GMP P
Sbjct: 404 HITGRI-----RDVIIPPKPHPSGGMSPY-PPAGSTPHHPSRQDPAPPHHSG--GMPPYP 455
Query: 367 WMGGYGDQPSRMGSGSI-NSCPPGQ--------MGEVSAEFSMKILCSAGKIGGVIGKGG 417
+ P MG + + PPGQ MG +S C G G
Sbjct: 456 MHPFRPNHP--MGPFDVADHRPPGQHPAHPMEHMGADRIPYSYG--CEQG------GPRP 505
Query: 418 FNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF-SE 476
F L+Q + + W P +QT DA + +K S
Sbjct: 506 F----LEQPSPRT-----------------------WAPEAQTADAPRSIPDKGLAMDSR 538
Query: 477 KGTI-------------TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ 523
KG++ TT +++P +G I G G + E++ ++ GA + +
Sbjct: 539 KGSVAGSENQVATPTSTTTEVVIPCKYIGFICGTNGSDLAEIQ-------KISGAAITVH 591
Query: 524 DPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMK 561
DP PG ++ V + G E A +F+ G K
Sbjct: 592 DPKPGDTDASVFVCGDPEQTKKAQSLIHAFIFCGLYQK 629
>gi|326513114|dbj|BAK06797.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 627
Score = 173 bits (439), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 115/320 (35%), Positives = 162/320 (50%), Gaps = 36/320 (11%)
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLP-ADRLPPCAMNTDEMVQISGK 297
+ R+L VGC+LGK G ++R+R E+GA IRV +++PPCA+ DE++ ISG
Sbjct: 109 VVGCRMLAAGGQVGCVLGKGGKTVERMRQESGAQIRVFRNREQVPPCALQGDELIHISGS 168
Query: 298 PNVAKRALYEVSTLLHQNPRKDKP--PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPAR 355
+ A++AL VST L NPR D PS P G PP D H + P
Sbjct: 169 FSAARKALLLVSTCLQDNPRPDTSNFPSGRPFGPPGSGVGCPPG--VDPHSQRSYLPPPH 226
Query: 356 NSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGK 415
H + S N PG V E +++C +GGVIGK
Sbjct: 227 VPDYHAR-----------------NFSSNGAAPGPRFFVEQEIVFRMICLNDMVGGVIGK 269
Query: 416 GGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS 475
GG ++ LQ ETGAS+ V D DSDER+I SA E RS + DA+L++ +K SE S
Sbjct: 270 GGSTIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVYSKISEAS 329
Query: 476 --EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECI 533
+ ++ RLLVP+ +GC+LG+GG +I EMR+ T A IR+ G +E I
Sbjct: 330 MDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFG------------NEQI 377
Query: 534 VDIRGSSEHLISAHGTYQSF 553
++ L+ G++QS
Sbjct: 378 PRCAQRNDELVQVTGSFQSI 397
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 105/183 (57%), Gaps = 28/183 (15%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V+R++C + +GGVIGK G+ +++L+ ET A + V D + S+ER+I+I
Sbjct: 251 EIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVI--------- 301
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
SA E + P +QDALL+V+ +I E + +++S++ ARLLV
Sbjct: 302 -------SARENSEMMRSP---SQDALLRVYSKISEASM---------DKSSSVPARLLV 342
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P +GCLLGK G +I +R TGA+IR+ +++P CA DE+VQ++G + AL
Sbjct: 343 PAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALL 402
Query: 307 EVS 309
++
Sbjct: 403 HIT 405
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 42/86 (48%), Gaps = 4/86 (4%)
Query: 104 VGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
V +KG S+S + + PA T ++ P + IG V G G+ + +++ + A ITV
Sbjct: 533 VDFRKGPVSSSENQVA----TPATTTTEVVIPCKYIGFVCGTNGSDLDEIKKISGAAITV 588
Query: 164 ADTIPGSEERVIIIYSSPTKIAKTQN 189
D PG +II P + K Q+
Sbjct: 589 HDPKPGDTNSTVIICGDPEQTKKAQS 614
>gi|357445989|ref|XP_003593272.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
gi|355482320|gb|AES63523.1| Heterogeneous nuclear ribonucleoprotein K [Medicago truncatula]
Length = 766
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 131/435 (30%), Positives = 212/435 (48%), Gaps = 71/435 (16%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPT---KIAK 186
+R+LC S +IGGVIGK+G ++K+L+ T AKI + D+ S +RVI++ + K+
Sbjct: 50 FRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKVMV 109
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+ D A E K AQ+ALL+V DRI+E + + T++ RL+
Sbjct: 110 RSHSGDGEAIEVSK--------AQEALLRVFDRILE---VAAEMEGIELGDRTVSCRLVA 158
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
+ G ++GK G V+++++ +TG I V D LP C + DE+++I G + K+AL
Sbjct: 159 DSAQAGSVIGKGGKVVEKIKKDTGCKIWVC-KDNLPACISSPDEVIEIEGSVSSVKKALV 217
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHS------------------------------ 336
VS L D+ + GQN H
Sbjct: 218 AVSRNLQDRHHADRTKMT------GQNSHEVIHHEALVGVPRETLMSVPRETFIGAPRET 271
Query: 337 ----PPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMG 392
P + D+H R S+L +PS+ G ++S P
Sbjct: 272 LTAVPCETLTDLHV---DHLLQRRSALSILPSSSNSYATGVHSLSAEVNRVSSLEPKAHQ 328
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG 452
+ E + KI+CS +IGGVIGKGG ++ LQ ETGA++ V + + ++R+I +A E
Sbjct: 329 Q---EITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASES 385
Query: 453 LWNPRSQTIDAILQLQNKTSEFS-EKG---------TITTRLLVPSSKVGCILGQGGHVI 502
+ S A + + +++ E EKG ++T +L+V S++VGC+LG+GG ++
Sbjct: 386 PESRYSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIV 445
Query: 503 NEMRRRTQADIRVVG 517
+EMR+ T A IR+VG
Sbjct: 446 SEMRKATGASIRIVG 460
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 135/245 (55%), Gaps = 23/245 (9%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ ++I+C + +IGGVIGK GNI+++L+ ET A ++V ++ E+R+I I
Sbjct: 330 EITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITI--------- 380
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+A+E+ + P AQ A + V R +E + G+ S N S++TA+L+V
Sbjct: 381 -------TASESPESRYSP---AQKATVLVFSRSVEAGIEKGIDSGL-NTGSSVTAQLVV 429
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
+N VGCLLGK G ++ +R TGA+IR++ D++ CA + D++VQISG+ + + ALY
Sbjct: 430 SSNQVGCLLGKGGVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALY 489
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGG-QNFHSPPAPMADMHPLGN-SSWPARNSSLHGMPS 364
+ L N S+ ++ Q+ SP + D+ PLG+ SS A ++ +
Sbjct: 490 NATGRLRDNLFGGTLKSAGTRSLSSVQSDTSPYGRLRDV-PLGSQSSLRADTNAFVRLRD 548
Query: 365 TPWMG 369
P +G
Sbjct: 549 VPLVG 553
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 51/211 (24%)
Query: 331 GQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPS-TPWMGGYGD--QPSRMGSGSINSCP 387
G NF SPPA S+ G+P P+ G +PS+ P
Sbjct: 2 GSNFLSPPA----------------KRSITGLPDPNPFPNGSSKRAKPSK---------P 36
Query: 388 PGQMGEVSA-EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
P Q + A + ++LC++ +IGGVIGK G +K LQ TGA I +ED+P +S +RVI
Sbjct: 37 PQQPLPIPAGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIM 96
Query: 447 ---ASAFEGLWNPRSQTID-----------AILQLQNKTSEFS------EKG--TITTRL 484
AS +G RS + D A+L++ ++ E + E G T++ RL
Sbjct: 97 VIGASNIDGKVMVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVSCRL 156
Query: 485 LVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ S++ G ++G+GG V+ ++++ T I V
Sbjct: 157 VADSAQAGSVIGKGGKVVEKIKKDTGCKIWV 187
>gi|357476219|ref|XP_003608395.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355509450|gb|AES90592.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 616
Score = 171 bits (433), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 125/408 (30%), Positives = 212/408 (51%), Gaps = 54/408 (13%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
V+R+LC + +IG IGK+G+++KSL++ T A+I + D ERVI++ +
Sbjct: 20 VVFRLLCHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVIVN------- 72
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
N D D S+ P Q+ALLKV +RI+ D+ + + + ++ RLLV
Sbjct: 73 LNGDGDV-------SLNP----QEALLKVFERIL--DVAAAESDGNGVGDRVVSCRLLVN 119
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G ++GK G V+ ++R++TG IRVL D+LP C +DE+++I G + K+AL
Sbjct: 120 AGQAGGVIGKGGMVVAKIRADTGCRIRVL-NDKLPACTKPSDEIIEIQGIASSVKKALVA 178
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL-------H 360
V+ L P D+ + Y + P + L R+S++ +
Sbjct: 179 VAGRLQDCPPLDRTKMMGTRPYEAFQNETSAVPHEGLTDLNMDFRLQRSSAISTSSIRSN 238
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNV 420
G+PS P + ++S P + + E + +ILCS +IG V+GKGG V
Sbjct: 239 GVPSK-------SHPLSVEDNRVSSLDPEALKQ---EVTFRILCSGDRIGAVLGKGGSIV 288
Query: 421 KQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ---TIDAILQLQNKTSEF--- 474
K LQ ETGA+I V + ++R+I +A E NP S+ +A++ + ++ E
Sbjct: 289 KALQNETGANISVGPPVVECEDRLITITALE---NPESRFSPAQEAVVLVFCRSIECCIE 345
Query: 475 -------SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+++ ++T +L+VPS++VG +LG+GG +++EMR+ T IR+
Sbjct: 346 KVVDWRSNKESSVTAQLVVPSNQVGVLLGKGGAIVSEMRKATWTSIRI 393
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 105/338 (31%), Positives = 160/338 (47%), Gaps = 59/338 (17%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ +RILC +IG V+GK G+IVK+L+ ET A I+V + E+R+I I
Sbjct: 265 EVTFRILCSGDRIGAVLGKGGSIVKALQNETGANISVGPPVVECEDRLITI--------- 315
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+A E + P AQ+A++ V R IE + N+ S++TA+L+V
Sbjct: 316 -------TALENPESRFSP---AQEAVVLVFCRSIE-CCIEKVVDWRSNKESSVTAQLVV 364
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK-PNV----- 300
P+N VG LLGK G ++ +R T +IR+ +P CA D++VQISG+ PNV
Sbjct: 365 PSNQVGVLLGKGGAIVSEMRKATWTSIRITRNGEVPKCASFNDQVVQISGELPNVRDALY 424
Query: 301 -AKRALYEVSTLLHQN-----PRKDKPPSSFPQAYGGQNF----HSPPAPMADMHPLGNS 350
A R L + L+ QN P + +P S P GGQ+ H P +H L S
Sbjct: 425 NATRRLRDHIFLIAQNSGGTGPYR-RPRDSIPLGLGGQSVVGSNHGP-----SIHSLSQS 478
Query: 351 ------SWPARNSSLHGMPSTPWMGG----YGDQPSRM-----GSGSINSCPPGQMGE-- 393
S + S+ G+ + +GG Y D R G + S +G
Sbjct: 479 MDHLTLSRNSGRSASSGVWAPKVVGGKNSRYTDDAGRRLNPREGDLELASGSNTVIGNAA 538
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASI 431
+ +++I+ IG V G+ G N+ QL+Q +GA +
Sbjct: 539 IITNTTVEIMLPNDIIGSVYGENGSNLDQLRQISGAKV 576
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/169 (33%), Positives = 86/169 (50%), Gaps = 23/169 (13%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG----LW 454
++LC A +IG IGK G +K LQQ TGA I ++DAP D ERVI G
Sbjct: 22 FRLLCHASRIGAFIGKSGSVIKSLQQLTGARIRIDDAPVDCPERVIVVIVNLNGDGDVSL 81
Query: 455 NPRS---QTIDAILQLQNKTSEFSEKG--TITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
NP+ + + IL + S+ + G ++ RLLV + + G ++G+GG V+ ++R T
Sbjct: 82 NPQEALLKVFERILDVAAAESDGNGVGDRVVSCRLLVNAGQAGGVIGKGGMVVAKIRADT 141
Query: 510 QADIRVVGARVKLQDPHPGS---SECIVDIRGSS----EHLISAHGTYQ 551
IRV L D P S+ I++I+G + + L++ G Q
Sbjct: 142 GCRIRV------LNDKLPACTKPSDEIIEIQGIASSVKKALVAVAGRLQ 184
>gi|255563372|ref|XP_002522689.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538165|gb|EEF39776.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 698
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 122/402 (30%), Positives = 199/402 (49%), Gaps = 50/402 (12%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +R+LC + +IGG+IGK+G I+K L++++ AKI + ++ S +RVI + + +
Sbjct: 53 PGHVSFRLLCHASRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVITVIAEGQIV 112
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI---- 240
+K + + ++ AQ+ L++V +RI+E +A++ D N
Sbjct: 113 SKVRVESEEVDVSR----------AQEGLIRVFERILE------VAAESDGINVVAGGGG 156
Query: 241 --TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+ R+L + G ++GK G V++++R + G IRVL D+LP CA +EM++I G
Sbjct: 157 VVSCRMLAGSKQAGSVIGKGGKVVEKIRKDCGVKIRVL-TDKLPVCAGPNEEMIEIEGDI 215
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS 358
K+AL VS L DKP + + P ++ P N P +
Sbjct: 216 LSVKKALIAVSRCLQDCQPVDKPRVGSSKYFEAVPQEPLPEMRVEIAPQRNIMVPTMQN- 274
Query: 359 LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
+ + P + + R+ P M E KILC +GGVIGKGG
Sbjct: 275 -NAVSCAPVPHNFLLETDRV--------PSLDMKLFQQEVVFKILCPNDMVGGVIGKGGT 325
Query: 419 NVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG 478
+K LQ ETGASI + +SDER+I A E NP S+ A +K
Sbjct: 326 IIKALQNETGASITIGATIAESDERLITVIASE---NPESRYSAA------------QKA 370
Query: 479 TIT--TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGA 518
+ +RL+VPS++VGC+LG+GG +I++MR+ T I+++
Sbjct: 371 VVLVFSRLVVPSNQVGCLLGKGGIIISDMRKTTGTSIKILAG 412
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/189 (34%), Positives = 98/189 (51%), Gaps = 43/189 (22%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V++ILCP+ +GGVIGK G I+K+L+ ET A IT+ TI S+ER+I + +S ++
Sbjct: 304 EVVFKILCPNDMVGGVIGKGGTIIKALQNETGASITIGATIAESDERLITVIASENPESR 363
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+ AAQ A++ V +RL+V
Sbjct: 364 -------------------YSAAQKAVVLVF------------------------SRLVV 380
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+N VGCLLGK G +I +R TG +I++L D+LP C +++VQISG K A+Y
Sbjct: 381 PSNQVGCLLGKGGIIISDMRKTTGTSIKILAGDQLPKCVPENEQVVQISGDFMNVKDAVY 440
Query: 307 EVSTLLHQN 315
V+ L N
Sbjct: 441 HVTGRLRDN 449
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 86/172 (50%), Gaps = 30/172 (17%)
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
PPG + S ++LC A +IGG+IGK G +KQLQQ++GA I +E++P +S +RVI
Sbjct: 52 PPGHV-------SFRLLCHASRIGGIIGKSGTIIKQLQQQSGAKIRIEESPAESSDRVIT 104
Query: 447 --------------------ASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLV 486
+ A EGL + ++ + G ++ R+L
Sbjct: 105 VIAEGQIVSKVRVESEEVDVSRAQEGLIRVFERILEVAAESDGINVVAGGGGVVSCRMLA 164
Query: 487 PSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
S + G ++G+GG V+ ++R+ IRV+ ++ + G +E +++I G
Sbjct: 165 GSKQAGSVIGKGGKVVEKIRKDCGVKIRVLTDKLPV---CAGPNEEMIEIEG 213
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + VP + +G + G+ + +R+ + GA+V + +P GSS+ I+ I G+
Sbjct: 626 TVEIRVPENVIGSVYGENDSNLTRLRQ-------ISGAKVIVHEPRLGSSDRIIVISGTP 678
Query: 541 EHLISAHGTYQSFMTSGQS 559
+ +A Q+F+ +GQS
Sbjct: 679 DETQAAQSLLQAFILTGQS 697
>gi|357466759|ref|XP_003603664.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355492712|gb|AES73915.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 662
Score = 170 bits (430), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 133/420 (31%), Positives = 218/420 (51%), Gaps = 47/420 (11%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIY--------- 178
V+R+LCP+ KIGGVIGK G+I+ +R ET K+ + + +PG EERVI
Sbjct: 32 VVFRLLCPASKIGGVIGKGGSIISQIRHETGVKVKIEEPVPGCEERVITFLKESEEGSAE 91
Query: 179 ---------SSPTKIAK---------TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI 220
S +K+ ++KD S +++ E + + A++ V +R+
Sbjct: 92 QGKEVNDNDESESKVKDDEEKGNGDDNEDKDSVSVEDSQSEKVNSNPTIMRAVMLVFERV 151
Query: 221 IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
E++ GG D+++ RLL+ +N VGC+LGK G VI+R+ +E+GA IR+LP +
Sbjct: 152 AEDE--GG----DESKKGYFGLRLLILSNQVGCILGKGGSVIKRMSAESGAQIRILPKEE 205
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAP 340
+P CA ++DE+VQI+G V +RAL V L +N +D S P G + HS
Sbjct: 206 IPACASDSDELVQITGGVEVVRRALQSVFQQLVENSPRDH--ESLPTNLTGPSSHS---- 259
Query: 341 MADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSM 400
P ++ + +S P+ + + G+I G+M +
Sbjct: 260 -YGQFPPNKRTFAGQGASFATGPNEIPVFHSAPMIPKFHEGAIL----GRMRPPPEILTF 314
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQT 460
++LC + +G +IGKGG +K LQQET + I V +A S++ +I S + S
Sbjct: 315 RLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSEDCIIIISGPAHPDDRISPV 374
Query: 461 IDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
+AI ++QN+ S S++ ++ R++V S +GC+LG+GG +I EMR + A IR++G
Sbjct: 375 QEAIFRVQNRISRAMLDSKEHSMLARVIVSSKHIGCLLGKGGSIIAEMRNLSGAHIRMLG 434
Score = 122 bits (305), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 160/344 (46%), Gaps = 60/344 (17%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +R+LCPS +G +IGK G+I+K L++ET ++I V + IPGSE+ +III S P
Sbjct: 309 PEILTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEAIPGSEDCIIII-SGPAH- 366
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
DD + Q+A+ +V +RI L D++ ++ AR+
Sbjct: 367 ------PDDRIS-----------PVQEAIFRVQNRISRAML--------DSKEHSMLARV 401
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
+V + +GCLLGK G +I +R+ +GA+IR+L D+ P C DE++Q+SG A
Sbjct: 402 IVSSKHIGCLLGKGGSIIAEMRNLSGAHIRMLGKDKGPKCVSEDDEVIQVSGVIEAVHDA 461
Query: 305 LYEVSTLLHQNPRKDKPPSS-FPQ------------AYGGQNFHSPPAPMADM------- 344
L +++T L N +D PS+ FP Y G+ SPP +D+
Sbjct: 462 LLQITTRLRNNFFRDAFPSANFPSNSAFLDQHSPFPPYLGRRGLSPPGMYSDLGPRHPHA 521
Query: 345 -HPLGNSSWPARNSSLHGMP-----STPW-------MGGYGDQPSRMGSGSINSCPPGQM 391
PL + N G+P PW GG+ P G S G
Sbjct: 522 DFPLDDHPPFMNNMYRSGIPPLISERKPWGPKGILEGGGHMGLPEFAGGPRRISGFAGGS 581
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
+ +++++ + + G+ G +KQ+ Q + A++ + D
Sbjct: 582 QPIITSTTVEVVVPRALVAEIYGENGECLKQILQISDANVIITD 625
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
+T RLL PS VG ++G+GG +I +++ T ++I+V+ A PGS +CI+ I G
Sbjct: 312 LTFRLLCPSESVGNLIGKGGSIIKMLQQETASEIKVIEA-------IPGSEDCIIIISG 363
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 51/175 (29%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI------- 445
+VS+ ++LC A KIGGVIGKGG + Q++ ETG + +E+ +ERVI
Sbjct: 27 DVSSSVVFRLLCPASKIGGVIGKGGSIISQIRHETGVKVKIEEPVPGCEERVITFLKESE 86
Query: 446 RASAFEG--------------------------------LWNPRSQTID-------AILQ 466
SA +G + + +S+ ++ A++
Sbjct: 87 EGSAEQGKEVNDNDESESKVKDDEEKGNGDDNEDKDSVSVEDSQSEKVNSNPTIMRAVML 146
Query: 467 LQNKTSE-----FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ + +E S+KG RLL+ S++VGCILG+GG VI M + A IR++
Sbjct: 147 VFERVAEDEGGDESKKGYFGLRLLILSNQVGCILGKGGSVIKRMSAESGAQIRIL 201
>gi|255583245|ref|XP_002532387.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223527911|gb|EEF29999.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 688
Score = 170 bits (430), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 146/472 (30%), Positives = 228/472 (48%), Gaps = 59/472 (12%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIY--SSP 181
QP +R++C + IGG+IG++G+ + +R +T + + + GS+ RVI I +SP
Sbjct: 21 QPGQVAFRVVCHASIIGGLIGRSGSAISQIRRDTGCTVHCDEQVQGSDHRVITIVGPASP 80
Query: 182 TK---IAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED----LFGGMASDDD 234
K + T D + A E +KE + AQ+A+++V +R+ E D GG+ D++
Sbjct: 81 GKRITLNSTTCHDHNGAEEEEKELVS---VAQEAVIRVCERMWEVDGQRERRGGV--DNN 135
Query: 235 NENSTIT---ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
+ NS + LL +G ++GK G + R+R E+GA+IR LP P CA D++
Sbjct: 136 SNNSGLGEGYCGLLADTTQIGAVVGKGGKNVLRMRRESGADIRFLPP---PHCASKDDQL 192
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSS 351
+QI+G K+AL V+ LH P +K P+ + + + P A+ P +S
Sbjct: 193 IQITGSILAVKKALVAVTDCLHDCPPYEKDPTLLMRPLERASHLASSDPHAEFFPHLSSL 252
Query: 352 WPARNSSLHGMPSTPWMGGYG-DQPSRMGSGSINSCPPGQMGE-VSAEFSMKILCSAGKI 409
P P G G P +G P Q E V E S ++LCS G
Sbjct: 253 LP------------PLSGNSGTSHPLSSDAGE----DPNQDAEAVRHEVSFRLLCSNGAA 296
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGL--WNPRSQTIDAILQL 467
G +IGK G V+ LQ ETGASI + S ERV+ SA E L W+ +Q AIL
Sbjct: 297 GSIIGKKGTIVRTLQNETGASIMFAAPMSMSGERVVTISALENLESWHSPAQNA-AILVF 355
Query: 468 QNKTSEFSEKG---------TITTRLLVPSSKVGCILGQG--GHVINEMRRRTQADIRVV 516
EKG T+T RLLV S V C++ +G G++ +EM + ADIR++
Sbjct: 356 ARSVEHDIEKGHPSGLIEGATVTARLLVASDAVCCLIEKGGTGNIDSEMIEVSGADIRIL 415
Query: 517 GARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQ 568
+ + +++I G +++ +A FM +G+ + P S Q
Sbjct: 416 DGEQIM--ACASEDDVVIEITGEYKNVQNA-----LFMVTGKLRGLSPDSDQ 460
>gi|356522258|ref|XP_003529764.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 559
Score = 169 bits (428), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 130/431 (30%), Positives = 201/431 (46%), Gaps = 100/431 (23%)
Query: 111 WSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS 170
++N+S+++ D V+RI+CP+ K V G+ AKI V D + +
Sbjct: 2 FNNNSKKRRHAPPAAPDAVFRIVCPAAKTEDVATIGGD---------GAKILVEDLV-SA 51
Query: 171 EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMA 230
EERV++I + AAQ AL++V +R +
Sbjct: 52 EERVVVIVGEES-------------------------AAQVALVRVFERTV--------- 77
Query: 231 SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE 290
D++ +NST++ +L+ P+ VGC+LG+ G +++++R +TGA+IRVLP D+ P +E
Sbjct: 78 -DEETKNSTVSCKLVAPSYQVGCVLGRGGKIVEKIRQDTGAHIRVLPKDQPPLPPPPGEE 136
Query: 291 MVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNS 350
+QI+G K+A+ VS + N P D H G
Sbjct: 137 FIQITGNFGAVKKAVLSVSACFYDNNSGAFKP-------------------LDHHSRGCY 177
Query: 351 SWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIG 410
S A +SS H M + + K+LC K+G
Sbjct: 178 SESAGHSS-HRM------------------------------FLEEDVVFKLLCHHEKVG 206
Query: 411 GVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNK 470
+IGKGG V+ LQ ETGASI + +A DSDERV+ SA E S +A++++ +
Sbjct: 207 SLIGKGGSVVRALQNETGASIQIVEAGPDSDERVVVISARETSEQKHSPAQEAVIRVHCR 266
Query: 471 TSE--FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPG 528
+E F + +LLV S +VGC+LG+GG VI+EMRR T A IR+ K Q +
Sbjct: 267 LTEIGFEPSAAVVAKLLVRSPQVGCLLGKGGLVISEMRRVTGASIRIFS---KEQIKYIS 323
Query: 529 SSECIVDIRGS 539
+E +V + GS
Sbjct: 324 QNEEVVQVIGS 334
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 113/471 (23%), Positives = 199/471 (42%), Gaps = 104/471 (22%)
Query: 108 KGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI 167
+G +S S+ S D V+++LC K+G +IGK G++V++L+ ET A I + +
Sbjct: 174 RGCYSESAGHSSHRMFLEEDVVFKLLCHHEKVGSLIGKGGSVVRALQNETGASIQIVEAG 233
Query: 168 PGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
P S+ERV++I SA ET S + H AQ+A+++VH R+ E
Sbjct: 234 PDSDERVVVI----------------SARET---SEQKHSPAQEAVIRVHCRLTEIGF-- 272
Query: 228 GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMN 287
++ + A+LLV + VGCLLGK G VI +R TGA+IR+ +++ + N
Sbjct: 273 -------EPSAAVVAKLLVRSPQVGCLLGKGGLVISEMRRVTGASIRIFSKEQIKYISQN 325
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPL 347
+E+VQ+ G + AL+ +++ + + + P NF +PP
Sbjct: 326 -EEVVQVIGSLQSVQDALFHITSRIRETIFPIRTPP---------NFSAPPHLPPFPEMP 375
Query: 348 GNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAG 407
P + G P P +G D ++ PP + F
Sbjct: 376 PPLFRPRNHLMSSGHPPPPQVGHPHDH---------STVPPMPVDHQQHAFVHG------ 420
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQ- 466
+G+G N+ +RV +EG +PRS A+ +
Sbjct: 421 -----MGRGPPNM---------------------DRVPYPRGYEGPNSPRSWNPLAVNRG 454
Query: 467 ----------LQNKTSEFSEKG-------TITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
L ++ E G +T + +P + + G+ + ++R+ +
Sbjct: 455 NSGGTADTSSLASRNENLGENGNPLQNPNNLTIEITIPHMYLTHVYGENNSNLTQIRQTS 514
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSM 560
GA V + DP PG++E +V + G+ + +A Q+F+ GQ++
Sbjct: 515 -------GANVVVHDPKPGATEGLVIVSGAPDQTHAAQSLIQAFILCGQTI 558
>gi|224116392|ref|XP_002317286.1| predicted protein [Populus trichocarpa]
gi|222860351|gb|EEE97898.1| predicted protein [Populus trichocarpa]
Length = 363
Score = 164 bits (415), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 112/356 (31%), Positives = 177/356 (49%), Gaps = 24/356 (6%)
Query: 109 GNWSNSSREQS-FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI 167
G+ +N R + G + VYRILCP IG VIGK+G ++ S+R E++A++ V D
Sbjct: 16 GDTNNQKRHKDDKGTNNDGLIVYRILCPDGVIGSVIGKSGKVINSIRHESRARVKVVDPF 75
Query: 168 PGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
PG+++R+I IY + + P CAAQDALLKVH I +
Sbjct: 76 PGAKDRIITIYCHIKEKED-------VDVDDDFNHTNPLCAAQDALLKVHAAI--SNAVA 126
Query: 228 GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---C 284
+ D ++LVP + ++GK G I+RLRS+T +I+++ D P C
Sbjct: 127 SLGDSDKRLRDKEECQILVPASQSANIIGKAGATIKRLRSKTRTSIKIIAKDSTDPTHSC 186
Query: 285 AMNTDEMVQISGKPNVAKRALYEVSTLLHQ-NPRKDKPPSSFPQAYGGQNFHSPPAPMAD 343
AM+ D + I+G+ K+AL+ VS ++++ NP+++ P + P+
Sbjct: 187 AMDFDNFLLITGESEAVKKALFAVSAIMYKFNPKEEIPLEATVPEPPPSIIIPSDVPIYQ 246
Query: 344 MHPLGNSSWPARNSS----LHGMPSTPWMGGYGDQPSR--MGSGSINSCPPGQMGEVS-- 395
++ P +S + G P + GYGD S + + ++ P G VS
Sbjct: 247 PGGFYPNAEPIVSSRSVPPILGATHIPELQGYGDMGSSWPVYTSTLPVVP--SFGNVSRY 304
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
E +++LC KIG VIGKGG +K ++Q +GA I V+D D DE +I +A E
Sbjct: 305 EELIIRVLCPFDKIGRVIGKGGSTIKSIRQASGARIEVDDTKADRDECIITVTATE 360
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 75/183 (40%), Gaps = 36/183 (19%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-------------- 446
+ILC G IG VIGK G + ++ E+ A + V D + +R+I
Sbjct: 39 RILCPDGVIGSVIGKSGKVINSIRHESRARVKVVDPFPGAKDRIITIYCHIKEKEDVDVD 98
Query: 447 ---------ASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQ 497
+A + L + +A+ L + +K ++LVP+S+ I+G+
Sbjct: 99 DDFNHTNPLCAAQDALLKVHAAISNAVASLGDSDKRLRDKEE--CQILVPASQSANIIGK 156
Query: 498 GGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVD------IRGSSEHLISAHGTYQ 551
G I +R +T+ I+++ +D + C +D I G SE + A
Sbjct: 157 AGATIKRLRSKTRTSIKIIA-----KDSTDPTHSCAMDFDNFLLITGESEAVKKALFAVS 211
Query: 552 SFM 554
+ M
Sbjct: 212 AIM 214
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDI 536
G I R+L P +G ++G+ G VIN +R ++ ARVK+ DP PG+ + I+ I
Sbjct: 34 GLIVYRILCPDGVIGSVIGKSGKVINSIRHESR-------ARVKVVDPFPGAKDRIITI 85
>gi|110224788|emb|CAL07994.1| putative nucleic acid binding protein [Platanus x acerifolia]
Length = 288
Score = 163 bits (412), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 95/234 (40%), Positives = 146/234 (62%), Gaps = 22/234 (9%)
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG 348
DE++QI+G+ +V K+ALY++ST LH NP + + H + M++ H G
Sbjct: 1 DELLQITGEASVVKKALYQISTRLHDNPSRSQ--------------HLLTSAMSNAHQSG 46
Query: 349 NS-SWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSA-EFSMKILCSA 406
S + P + + G+ P MG YG GS N+ P VSA EFS++++C
Sbjct: 47 GSLTGPNAGAPIVGL--APLMGPYGGYKGDTGSEWPNAFYPAPRDSVSAKEFSLRLVCPT 104
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQ 466
G IGGVIGKGG +KQ++QE+GA I V+ + ++D+ +I S+ E +P S TIDA ++
Sbjct: 105 GNIGGVIGKGGSVIKQIRQESGAFIKVDSSAAEADDCIISISSKEFFEDPISPTIDAAVR 164
Query: 467 LQNKTSEFSEK----GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
LQ K SE S++ T TTRLLVP+S++GC++G+GG +I+EMR+ T+A+IR++
Sbjct: 165 LQPKCSEKSDRESGDSTFTTRLLVPTSRIGCLIGKGGSIISEMRKVTKANIRIL 218
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 109/198 (55%), Gaps = 29/198 (14%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R++CP+ IGGVIGK G+++K +R+E+ A I V + +++ +I I S
Sbjct: 99 RLVCPTGNIGGVIGKGGSVIKQIRQESGAFIKVDSSAAEADDCIISISS----------- 147
Query: 191 DDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
KE E P DA +++ + E+ SD ++ +ST T RLLVP +
Sbjct: 148 ---------KEFFEDPISPTIDAAVRLQPKCSEK-------SDRESGDSTFTTRLLVPTS 191
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
+GCL+GK G +I +R T ANIR+L + LP A DEMVQI+G +VA+ AL +V+
Sbjct: 192 RIGCLIGKGGSIISEMRKVTKANIRILSKENLPKVASEDDEMVQITGDLDVARNALIQVT 251
Query: 310 TLLHQN-PRKDKPPSSFP 326
T L N ++ S+FP
Sbjct: 252 TRLKTNFFEREGALSAFP 269
>gi|145347410|ref|XP_001418160.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578389|gb|ABO96453.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 651
Score = 161 bits (407), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 129/438 (29%), Positives = 204/438 (46%), Gaps = 70/438 (15%)
Query: 107 KKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT 166
+ G + S G + A YR+LCP+ +IG VIGK G ++K+ R ET A++ VA T
Sbjct: 37 RSGERRHRGEHGSNGEFRDASVRYRLLCPTTRIGRVIGKEGRVIKATRAETGARVKVAPT 96
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G++ERVI++ S DD T E E A+ AL ++ D I E+
Sbjct: 97 TRGADERVILVASG-----------DDL---TVGEDGEGMTTAEVALFRIFDTITGEE-- 140
Query: 227 GGMASDDDNEN-------------STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANI 273
G A+ ST RLLVP VG L+GK G VI +R+ +GA +
Sbjct: 141 GVTAARGGEGEGEGEASGGSTRGASTPICRLLVPRVQVGSLIGKGGTVISAIRASSGATV 200
Query: 274 RVLPADRLPPCAMNTDEMVQISG------------KPNVA--KRALYEVSTLLHQNPRKD 319
RV+PA+ LP CA DE++QI+ K ++A K AL ++ L + P K+
Sbjct: 201 RVMPANMLPACASQGDELLQITAPSRDADGAERDQKLSMASVKNALRMIAKHLREYPSKN 260
Query: 320 KPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMG 379
S + + +GN + P H +P G +RM
Sbjct: 261 AATESNRSPF-------------EAFMIGNKTAP------HAGVESPGAKNGGHMSTRMN 301
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
+ P G E + ++LC K G VIG+ G ++Q++ +TGA + V +
Sbjct: 302 LNGVY-VPGG------TEITFRLLCPVSKTGSVIGRNGEVIQQIRSQTGAKVKVCEQVNG 354
Query: 440 SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT-ITTRLLVPSSKVGCILGQG 498
++ER+I S+ + P A+ ++ E + + RLLV +S++GC++G+G
Sbjct: 355 AEERIICVSSSDDGLAPMLAAQVALFRVYRCIVESAGNEIPLPFRLLVQTSQIGCLIGKG 414
Query: 499 GHVINEMRRRTQADIRVV 516
G +I ++R T A +RV+
Sbjct: 415 GSIIKQIRNETGATVRVL 432
Score = 124 bits (311), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/313 (31%), Positives = 153/313 (48%), Gaps = 50/313 (15%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ +R+LCP K G VIG+ G +++ +R +T AK+ V + + G+EER+I + SS
Sbjct: 312 EITFRLLCPVSKTGSVIGRNGEVIQQIRSQTGAKVKVCEQVNGAEERIICVSSS------ 365
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
DD A P AAQ AL +V+ I+E NE + RLLV
Sbjct: 366 -----DDGLA--------PMLAAQVALFRVYRCIVE---------SAGNE-IPLPFRLLV 402
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP-NVAKRAL 305
+ +GCL+GK G +I+++R+ETGA +RVLP++ LP CA N DE+++I P + +
Sbjct: 403 QTSQIGCLIGKGGSIIKQIRNETGATVRVLPSEALPSCA-NDDELLEIGQWPADACALGI 461
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHS----PPAPMADMHPLGNSSWPARNSSLHG 361
VS L N R K QN + A++ P G + + +G
Sbjct: 462 RIVSGRLRGNIRH-KAAERLTSTADAQNTQTMGFDATWQQAELIPYGMT------QTAYG 514
Query: 362 MPSTPWMGGYGDQPSRMGSGSINSCPPGQMG-EVSAEFSMKILCSAGKIGGVIGKGGFNV 420
P T M S+ S PP ++ VS S+++ S+ IG V+G+GG N+
Sbjct: 515 SPETVMM-------SKTKSTGGARAPPVEIAPGVSVVNSVQMAISSQHIGSVLGRGGCNI 567
Query: 421 KQLQQETGASIHV 433
+Q +GA I +
Sbjct: 568 SLARQVSGARIKL 580
Score = 39.3 bits (90), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 50/102 (49%), Gaps = 16/102 (15%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS---------SE 531
+ ++ + S +G +LG+GG I+ R +V GAR+KL GS S+
Sbjct: 546 SVQMAISSQHIGSVLGRGGCNISLAR-------QVSGARIKLYPGAAGSRRTADRSVDSD 598
Query: 532 CIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQNINPQ 573
+++I GSSE + SA Q F+ S +M + +S+ Q
Sbjct: 599 RLLEISGSSEQVASAQDIIQRFIASSGAMLPEFASFTATGKQ 640
>gi|218202392|gb|EEC84819.1| hypothetical protein OsI_31905 [Oryza sativa Indica Group]
Length = 617
Score = 158 bits (400), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 109/345 (31%), Positives = 165/345 (47%), Gaps = 41/345 (11%)
Query: 214 LKVHDRIIEEDLFGGMASDDDNEN--STITARLLVPNNMVGCLLGKRGDVIQRLRSETGA 271
++ +R++ + G A+ ++ + R+L + VGC+LGK G ++R+R E+GA
Sbjct: 82 VRAWERVVGHRVGGDEAAGEEEREVPGVVGCRMLAASGQVGCVLGKGGKTVERMRQESGA 141
Query: 272 NIRVLP-ADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYG 330
IRV D+LPP A DE++ ISG + ++AL V+T L NPR D +
Sbjct: 142 QIRVFRNRDQLPPWAAPVDELIHISGNFSAVRKALLLVTTCLQDNPRPDASNFPPGRFGP 201
Query: 331 GQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQ 390
P P + ARN S N PG
Sbjct: 202 PGPVGIDPHSQRGYLPPSMPDYHARNYSS------------------------NMAAPGP 237
Query: 391 MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF 450
V E +++C +G +IGKGG ++ LQ ETGASI + + +DS+ERVI SA
Sbjct: 238 RFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVISAH 297
Query: 451 EGLWNPRSQTIDAILQLQNKTSEFS--EKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
E S DA+L++ ++ SE S + +T RLLVPS +GC+LG+GG +I EMR+
Sbjct: 298 ENSEMMHSPAQDAVLRVHSRISESSMDKSSAVTARLLVPSQHIGCLLGKGGSIIAEMRKI 357
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSF 553
T A IR+ G +E I ++ L+ G++QS
Sbjct: 358 TGAGIRIFG------------NEQIPRCAQRNDELVQVTGSFQSI 390
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 103/183 (56%), Gaps = 28/183 (15%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V+R++C + +G +IGK G+ +++L+ ET A I + + SEERVI+I
Sbjct: 244 EIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVI--------- 294
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+A E M H AQDA+L+VH RI E + +++S +TARLLV
Sbjct: 295 --------SAHENSEMM--HSPAQDAVLRVHSRISESSM---------DKSSAVTARLLV 335
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+ +GCLLGK G +I +R TGA IR+ +++P CA DE+VQ++G + AL
Sbjct: 336 PSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALL 395
Query: 307 EVS 309
++
Sbjct: 396 HIT 398
>gi|294464716|gb|ADE77865.1| unknown [Picea sitchensis]
Length = 348
Score = 156 bits (394), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 106/343 (30%), Positives = 176/343 (51%), Gaps = 72/343 (20%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V+RILCP++KIG VIG+AG+I+KSL+++ AKI + D +PGS+ER+III
Sbjct: 21 ELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDERIIII--------- 71
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
SA E ++++ P AQ+ALL + +I++ + D D IT +LL+
Sbjct: 72 -------SANEVLEDNLSP---AQEALLHIQSQIVD------LGPDKDG---VITTKLLI 112
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+N GCLLGK G +I +R +T ANIR+LP + LPPCA+++DEMVQI G A+ AL
Sbjct: 113 PSNQTGCLLGKGGAIISEMRKQTRANIRILPREDLPPCALDSDEMVQIVGDIRAARAALV 172
Query: 307 EVSTLLHQ---------------------NPRKDKPPSSFPQAYG-GQNFHSPPAPMADM 344
+V++ L + ++ PSS ++Y G F + + D
Sbjct: 173 QVTSRLRSFIHREIGISGPFLSSSSAPDPSSKRRLEPSSPGRSYSPGLGFQAGSRSLPD- 231
Query: 345 HPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPG---QMGEVSAEFSMK 401
+WP++ S +P Y ++ ++ G P G + + +++
Sbjct: 232 ------AWPSKEISGRNLPE------YDERATKQGG------PKGSGISTAGLVTKTTVE 273
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 444
++ I +I G V Q+ Q +GA +++ + SD+ +
Sbjct: 274 VVIPEHAIAPLIANSGKGVAQIAQISGAKVNLLEVRPGSDKVI 316
Score = 108 bits (271), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 64/163 (39%), Positives = 97/163 (59%), Gaps = 6/163 (3%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
E +ILC KIG VIG+ G +K LQ + GA I + DA SDER+I SA E L +
Sbjct: 21 ELVFRILCPNKKIGSVIGRAGSIIKSLQDDIGAKIKITDAVPGSDERIIIISANEVLEDN 80
Query: 457 RSQTIDAILQLQNKTSEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
S +A+L +Q++ + + G ITT+LL+PS++ GC+LG+GG +I+EMR++T+A+IR
Sbjct: 81 LSPAQEALLHIQSQIVDLGPDKDGVITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIR 140
Query: 515 VVGARVKLQDPHPGSSE---CIVDIRGSSEHLISAHGTYQSFM 554
++ R L S E + DIR + L+ +SF+
Sbjct: 141 IL-PREDLPPCALDSDEMVQIVGDIRAARAALVQVTSRLRSFI 182
>gi|224097168|ref|XP_002310861.1| predicted protein [Populus trichocarpa]
gi|222853764|gb|EEE91311.1| predicted protein [Populus trichocarpa]
Length = 404
Score = 152 bits (385), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 113/406 (27%), Positives = 201/406 (49%), Gaps = 56/406 (13%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTK 183
QP +R++C + KIG +IG +G+++ +R ET + + + GSE R I++ S +
Sbjct: 22 QPGQVAFRVVCHASKIGALIGHSGSVISQIRLETGCLVHCEEAVKGSEHRAIVVAGSASP 81
Query: 184 IAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR 243
K +D++ + AAQ+A+++V +R+ E D D +
Sbjct: 82 ERKIAVGEDETVEVS---------AAQEAVVRVLERMWEVDAV------KDGGDCEGYCG 126
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA-K 302
LL + +G ++G+ G I+R++ +GA+I +LPA P CA+ D+++QI+G VA K
Sbjct: 127 LLANTSQIGAVVGREGRNIKRMKRASGAHIWILPA---PLCALKEDQLIQITGSSTVAVK 183
Query: 303 RALYEVSTLLHQNP--RKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
+A+ +++ L P KD+ S +A + S P A+ P S P + ++
Sbjct: 184 KAVIAITSCLQDCPPYEKDEVDLSL-EAVRRRRSGSSGDPHAEFFPHLCSLLPTYSENI- 241
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNV 420
+ + P Q+ + +++C G G +IGKGG V
Sbjct: 242 ------------------ATDKDHKKPNEQL-----QVQFRMICPHGAAGSIIGKGGSVV 278
Query: 421 KQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSE------- 473
+ LQ +TGASI + T+SD R++ SA E L + S +A+L + ++ E
Sbjct: 279 RALQNQTGASIILAPPITNSDGRLVTVSALENLESSHSPAQNALLLVFARSIEHDIERAR 338
Query: 474 ---FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
E+ T+T LL+PS++V C++ +GG + +EM T ADI+++
Sbjct: 339 SLGLIEEITVTATLLLPSNRVSCLIERGGRIDSEMIETTGADIQIL 384
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 88/165 (53%), Gaps = 20/165 (12%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R++CP G +IGK G++V++L+ +T A I +A I S+ R++ +
Sbjct: 258 FRMICPHGAAGSIIGKGGSVVRALQNQTGASIILAPPITNSDGRLVTV------------ 305
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
SA E + S P AQ+ALL V R IE D+ S E T+TA LL+P+N
Sbjct: 306 ----SALENLESSHSP---AQNALLLVFARSIEHDIERAR-SLGLIEEITVTATLLLPSN 357
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
V CL+ + G + + TGA+I++L D+ CA N D ++Q+
Sbjct: 358 RVSCLIERGGRIDSEMIETTGADIQILQGDQFFYCASNNDVVLQV 402
>gi|54290950|dbj|BAD61631.1| putative HEN4 [Oryza sativa Japonica Group]
Length = 662
Score = 152 bits (384), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 215/452 (47%), Gaps = 63/452 (13%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T +RILCP K V G + + +R++T A +T+ PG RVI +
Sbjct: 85 TSFRILCPQSK---VYGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVIETSDGARR---- 137
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIE-------EDLFGGMASDDDNENSTI 240
A+ + S P AQ+ALL VH RI+E ED G + D + +
Sbjct: 138 -------EADGRPPSFSP---AQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKV 187
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDEMVQISGKPN 299
T RL+VP VGCLLGK G +I+++R+ET +IR+LP D+ P C ++E+VQ+ G+ N
Sbjct: 188 TTRLIVPRLHVGCLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGN 247
Query: 300 VAKRALYEVSTLLHQNPRKDK---------PPSSFPQA---YGGQNFHSPPAPMADMHPL 347
K+A+ +S L ++ +D+ P FPQ YGG P A P
Sbjct: 248 CVKKAVAIISDRLKESLHRDRGPFRGRMNSPEHRFPQEDEYYGGAQ-QMP----AYEEPY 302
Query: 348 GNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAG 407
G N+S+ + GY + G IN + + +ILC +
Sbjct: 303 GRPDQIRNNTSME-------LPGYEFDSN---GGKIND----HTEILFDDIIFRILCPSD 348
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
K+ ++G ++ LQ++ G I + D+ SDER+I ++ EG + +A+L L
Sbjct: 349 KVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHELFPAQEALLHL 408
Query: 468 QNKTSEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDP 525
Q + + ITTRLLVPSS++ C G+ G +++++R+T A+++++ R L
Sbjct: 409 QTHIVDLGPDKDNIITTRLLVPSSEIACFEGRDGS-LSDIQRQTSANVQIL-PRQALPSC 466
Query: 526 HPGSSECIV---DIRGSSEHLISAHGTYQSFM 554
S E I +IR + + L+ +S+
Sbjct: 467 ALESDELIQIVGEIRAARDALVQITAKLRSYF 498
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 92/339 (27%), Positives = 160/339 (47%), Gaps = 56/339 (16%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D ++RILCPS K+ ++G +++ L+E+ I + D++ GS+ER+III S
Sbjct: 338 DIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSR------ 391
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
E + P AQ+ALL + I++ + D DN IT RLLV
Sbjct: 392 ----------EGPDHELFP---AQEALLHLQTHIVD------LGPDKDN---IITTRLLV 429
Query: 247 PNNMVGCLLGKRGDV--IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
P++ + C G+ G + IQR +T AN+++LP LP CA+ +DE++QI G+ A+ A
Sbjct: 430 PSSEIACFEGRDGSLSDIQR---QTSANVQILPRQALPSCALESDELIQIVGEIRAARDA 486
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG-----NSSWPARNSSL 359
L +++ L ++ P P G H +P A P G + P+ +
Sbjct: 487 LVQITAKLRSYFYREIP---GPNQLGNITVHGSISP-AKGSPRGPYQGSDIPMPSYQQAQ 542
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF---------SMKILCSAGKIG 410
H S GG + GS +IN M + +A+ +++++ +
Sbjct: 543 HVPASWKDSGGGANMSFEQGS-NIND----DMRQSAAKRFAVPLVTRSTLEVVIPKSAVA 597
Query: 411 GVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA 449
+ + G + Q+ + +GA++ + D D+ E+V+R S
Sbjct: 598 SLTMRAGSKLAQISEMSGATVTLADERPDAIEKVVRISG 636
>gi|357463999|ref|XP_003602281.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355491329|gb|AES72532.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 646
Score = 152 bits (383), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 118/412 (28%), Positives = 202/412 (49%), Gaps = 50/412 (12%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T YR+LC + GGVIGK+G+I+KS+R+ T A I V + + G EER+I +I+ T
Sbjct: 63 TSYRLLCHDLRAGGVIGKSGSIIKSIRQHTGAWINVHEPVAGDEERII-------EISDT 115
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD------NENSTIT 241
+ +D D M AQ+ALL +H+R++E D G ++D ++
Sbjct: 116 RRRDPDG-------RMPQFSPAQEALLLIHERLLEND--PGFEDEEDYGGGRGGGGKRVS 166
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDEMVQISGKPNV 300
+RL+V VG LLGK G +I+++R ET IR+LP D LP C ++E+VQ++G +
Sbjct: 167 SRLVVSKMHVGSLLGKGGKIIEQMRIETKTQIRILPRDSYLPRCVSMSEEIVQVTGDIHN 226
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA----PMADMHPLGNSSWPARN 356
K A +S+ L ++ +D+ P P D P + S +R
Sbjct: 227 VKNAFLVISSRLRESQHRDRSGERGGGGGQFHGRGHSPERFFPPDDDYLP--HVSSGSRR 284
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPG-QMGEVSA-----------EFSMKILC 404
S+ G+G + + S + N M + +A + +ILC
Sbjct: 285 PSVE-------RSGFGSRIATTNSRNNNHASISYSMDQGAAPVAHDEQPFYEDLIFRILC 337
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
++ ++G+ G ++ LQ G + + D SDE+++ ++ EG + +A+
Sbjct: 338 PVDRVDRIVGESGGILELLQDRVGVDVQISDRVGGSDEQMVIITSEEGPNDTMFPAQEAL 397
Query: 465 LQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
L +Q + S+ ITTRL+VPSS + C+ G+ ++E+ R T A ++++
Sbjct: 398 LHIQTHIVDLSD-SIITTRLIVPSSDIECLDGKNAS-LSEIERSTGASVQIL 447
Score = 105 bits (263), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 161/332 (48%), Gaps = 50/332 (15%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D ++RILCP ++ ++G++G I++ L++ + ++D + GS+E+++II S
Sbjct: 330 DLIFRILCPVDRVDRIVGESGGILELLQDRVGVDVQISDRVGGSDEQMVIITSE------ 383
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
E ++M P AQ+ALL + I+ D +S IT RL+V
Sbjct: 384 ----------EGPNDTMFP---AQEALLHIQTHIV------------DLSDSIITTRLIV 418
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P++ + CL GK + + RS TGA++++LP + LPPC NTDE+VQI G+ A+ +
Sbjct: 419 PSSDIECLDGKNASLSEIERS-TGASVQILPREELPPCIANTDELVQIVGEIEAARNVIL 477
Query: 307 EVSTLLHQNPRKD------KPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN-SSL 359
+V+ L +D PPS+ + + +S M + ++ +N S+
Sbjct: 478 DVTAKLRSYVYRDILQWDTVPPSAPLPSVEASSSNS-------MATVAETATANQNMQSV 530
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVS--AEFSMKILCSAGKIGGVIGKGG 417
++ GG + + S + P G VS ++++ + ++ K
Sbjct: 531 AVALASKESGGSTEMGKQKESDRRDDLPTGLNRTVSLVTRSILEVVIPEYAVPKLLAKSK 590
Query: 418 FNVKQLQQETGASIH-VEDAPTDSDERVIRAS 448
+ Q+ + +GA++ VED P D E++I+ S
Sbjct: 591 SKLAQISELSGANVKLVEDRP-DEKEKIIQIS 621
>gi|125555220|gb|EAZ00826.1| hypothetical protein OsI_22856 [Oryza sativa Indica Group]
Length = 693
Score = 151 bits (382), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 133/452 (29%), Positives = 213/452 (47%), Gaps = 63/452 (13%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T +RILCP K V G + + +R++T A +T+ PG RVI +
Sbjct: 85 TSFRILCPQSK---VYGFPPSFIAKVRDDTNAVVTIHLPYPGDAVRVIETSDGARR---- 137
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIE-------EDLFGGMASDDDNENSTI 240
A+ + S P AQ+ALL VH RI+E ED G + D + +
Sbjct: 138 -------EADGRPPSFSP---AQEALLMVHRRILETEPDDGDEDGEYGPRAKDARDRGKV 187
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDEMVQISGKPN 299
T RL+VP VGCLLGK G +I+++R+ET +IR+LP D+ P C ++E+VQ+ G+ N
Sbjct: 188 TTRLIVPRLHVGCLLGKGGKIIEQMRAETKTHIRILPRDQHTPRCVSLSEEVVQVVGEGN 247
Query: 300 VAKRALYEVSTLLHQNPRKDK---------PPSSFPQA---YGGQNFHSPPAPMADMHPL 347
K+A+ +S L ++ +D+ P FPQ YGG P A P
Sbjct: 248 CVKKAVAIISDRLKESLHRDRGPFRGRMNSPEHRFPQEDEYYGGAQ-QMP----AYEEPY 302
Query: 348 GNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAG 407
G N+S+ P G G IN + + +ILC +
Sbjct: 303 GRPDQIRNNTSME--PPGYEFDSNG--------GKIND----HTEILFDDIIFRILCPSD 348
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
K+ ++G ++ LQ++ G I + D+ SDER+I ++ EG + +A+L L
Sbjct: 349 KVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSREGPDHELFPAQEALLHL 408
Query: 468 QNKTSEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDP 525
Q + + ITTRLLVPSS++ C G+ G +++++R+T A+++++ R L
Sbjct: 409 QTHIVDLGPDKDNIITTRLLVPSSEIACFEGRDGS-LSDIQRQTSANVQIL-PRQALPSC 466
Query: 526 HPGSSECIV---DIRGSSEHLISAHGTYQSFM 554
S E I +IR + + L+ +S+
Sbjct: 467 ALESDELIQIVGEIRAARDALVQITAKLRSYF 498
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 88/334 (26%), Positives = 154/334 (46%), Gaps = 46/334 (13%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D ++RILCPS K+ ++G +++ L+E+ I + D++ GS+ER+III S
Sbjct: 338 DIIFRILCPSDKVNSLVGTRDGLLEMLQEDVGVDIRLTDSLDGSDERIIIITSR------ 391
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
E + P AQ+ALL + I++ + D DN IT RLLV
Sbjct: 392 ----------EGPDHELFP---AQEALLHLQTHIVD------LGPDKDN---IITTRLLV 429
Query: 247 PNNMVGCLLGKRGDV--IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
P++ + C G+ G + IQR +T AN+++LP LP CA+ +DE++QI G+ A+ A
Sbjct: 430 PSSEIACFEGRDGSLSDIQR---QTSANVQILPRQALPSCALESDELIQIVGEIRAARDA 486
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG-----NSSWPARNSSL 359
L +++ L ++ P P G H +P A P G + P+ +
Sbjct: 487 LVQITAKLRSYFYREIP---GPNQLGNITVHGSISP-AKGSPRGPYQGSDIPMPSYQQAQ 542
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF----SMKILCSAGKIGGVIGK 415
H S GG + GS + + +++++ + + +
Sbjct: 543 HVPASWKDSGGGANMSFEQGSNINDDMRQSAAKRFAVPLVTRSTLEVVIPKSAVASLTMR 602
Query: 416 GGFNVKQLQQETGASIHVEDAPTDSDERVIRASA 449
G + Q+ + +GA++ + D D+ E+V+R S
Sbjct: 603 AGSKLAQISEMSGATVTLADERPDAIEKVVRISG 636
>gi|356496890|ref|XP_003517298.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 602
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 120/402 (29%), Positives = 191/402 (47%), Gaps = 39/402 (9%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +R++C + +GG+IG +G+IV LR ET KI D++ +E+RVI++ S +
Sbjct: 38 PGQIAFRLVCHASTVGGLIGSSGSIVSQLRRETGCKIHCEDSLSSAEDRVILVIGSLSP- 96
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
K D E +AQ+A+++V +R+ + + G+ S + N + ++L
Sbjct: 97 RKGLLLGDGGEVEVS--------SAQEAVVRVFERVWDLEAEKGVNS-NRAVNGEVFSKL 147
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L + +G ++GK G I +R+ TGA IRV P P CA +E+VQI+G K+A
Sbjct: 148 LAHTSQIGAVVGKGGKNITAIRNNTGAKIRVFPP---PQCATKDEELVQITGGILAVKKA 204
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPS 364
L VS L P K P + + P A++ P NS +S+ G+
Sbjct: 205 LISVSHCLQDCPPLCKVPVTSSTPTVSSSDRLSSDPNAELFPHLNSLL----TSMEGLSI 260
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQ 424
+ +R G+ E ++LCS G VIGK G V+ L+
Sbjct: 261 YERTTNSNETSNRDSKGA------------EHEVVFRLLCSNNVAGSVIGKRGAIVRALE 308
Query: 425 QETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSE----------F 474
+TGASI ++ ER++ SA E L + S DA++ + + E
Sbjct: 309 SKTGASIIFAAPLSEHAERIVTISAVESLESCNSPAQDAVILVFARIIEDHIGKGFLQVS 368
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
S + +T RLLV +S V C G G VI+E+R T ADI+++
Sbjct: 369 SMESPVTARLLVATSTVNCFSGNEGQVISELREVTGADIQIL 410
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 97/332 (29%), Positives = 155/332 (46%), Gaps = 37/332 (11%)
Query: 112 SNSSREQSFGNSQPAD--TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
+ +S E S +S+ A+ V+R+LC + G VIGK G IV++L +T A I A +
Sbjct: 264 TTNSNETSNRDSKGAEHEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAPLSE 323
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
ER++ I SA E+ + P AQDA++ V RIIE+ + G
Sbjct: 324 HAERIVTI----------------SAVESLESCNSP---AQDAVILVFARIIEDHIGKGF 364
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
E S +TARLLV + V C G G VI LR TGA+I++L + +P A + D
Sbjct: 365 LQVSSME-SPVTARLLVATSTVNCFSGNEGQVISELREVTGADIQILHGESVPNGASDED 423
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADM-HPLG 348
+VQI+G+ + ALY++++ + N P +A N+ P+ G
Sbjct: 424 VVVQITGEYRCVQNALYKITSRIRDNL---SPNEVVAEARPKSNWKVNKDPIKGKPFARG 480
Query: 349 NSSWPA-----RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKIL 403
S++P+ RN+ +H + D + G G M +++I+
Sbjct: 481 KSAFPSGRFLPRNAGVHAETILQNGELHTDLSENLERGR------GNMFATVTNTTVEII 534
Query: 404 CSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
S G V G+ G N+ +++Q +GA + V D
Sbjct: 535 VSEHVFGSVYGEDGGNLDRIRQISGAIVTVYD 566
>gi|357128987|ref|XP_003566150.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 729
Score = 149 bits (377), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 138/455 (30%), Positives = 229/455 (50%), Gaps = 42/455 (9%)
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAA-ETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
G EE+V + A + KDD S A +TK E + +A+L V DRI ++ G
Sbjct: 166 GKEEKV-----DSERDASKEEKDDPSVAKDTKAEPERVLLSPMNAILHVFDRIFITEI-G 219
Query: 228 GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMN 287
+ D E + ++ RLLV ++ VG LLG RG VI+++ +++G IRV ++LP CA+
Sbjct: 220 NESGDPSGERTPVSFRLLVLDSQVGWLLGNRGSVIKQMSADSGCEIRV-SKEKLPLCALL 278
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPL 347
DE+ QI+G+ + ++ L V+ +L +P ++ P F+ A M P
Sbjct: 279 KDELCQITGELDSVRKGLNAVAQVLLTHPPRES--DVLPSGLSSHAFNRSDALPPGMQP- 335
Query: 348 GNSSWP------ARN--SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQM---GEVSA 396
N S P AR S+ P+ P + DQ S + + P M V
Sbjct: 336 -NFSLPFQGPSHARGPFDSIDPRPNIPPFPTFPDQRSNIPP--FPAFPDALMHSHASVPP 392
Query: 397 E-FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E + ++LCS+ K+G +IGKGG N+K +Q++TG I + + S++RVI S +
Sbjct: 393 EPLTFRLLCSSDKVGSIIGKGGNNIKTIQKDTGCEIKILETVPKSEDRVIVISGPAHPGD 452
Query: 456 PRSQTIDAILQLQNKT---SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
S +AIL +Q + + +++G +RL+V ++VGC+LG+GG +I EMR+ ++A
Sbjct: 453 GISPAQNAILHVQRRITPPTANNKEGAAISRLIVSPNQVGCLLGKGGSIIAEMRKLSKAH 512
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHL------ISAHGTYQSFMTSGQSM--KVQP 564
I VV ++ K+ S E +V I G SE + I+A F +M +QP
Sbjct: 513 I-VVLSKDKIPKGVQESDE-VVQITGDSEAIQEALMQITARLRNHLFRDRMAAMGPNMQP 570
Query: 565 SSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHR 599
+ +++PQ + SH+S+ + S +H+
Sbjct: 571 -PFGSLDPQFGAF--AGSHESTSPRIYPNASQFHK 602
Score = 106 bits (264), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 103/196 (52%), Gaps = 27/196 (13%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +R+LC S K+G +IGK GN +K+++++T +I + +T+P SE+RVI+I
Sbjct: 392 PEPLTFRLLCSSDKVGSIIGKGGNNIKTIQKDTGCEIKILETVPKSEDRVIVI------- 444
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
S + + P AQ+A+L V RI +N+ +RL
Sbjct: 445 ---------SGPAHPGDGISP---AQNAILHVQRRI--------TPPTANNKEGAAISRL 484
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
+V N VGCLLGK G +I +R + A+I VL D++P +DE+VQI+G + A
Sbjct: 485 IVSPNQVGCLLGKGGSIIAEMRKLSKAHIVVLSKDKIPKGVQESDEVVQITGDSEAIQEA 544
Query: 305 LYEVSTLLHQNPRKDK 320
L +++ L + +D+
Sbjct: 545 LMQITARLRNHLFRDR 560
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 12/122 (9%)
Query: 108 KGNW---SNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA 164
+G W ++S +Q QP + RILCP+ K G VIGK G I+ +R+E KI V
Sbjct: 22 RGKWQKTKHTSSQQPPLVIQPGVPLIRILCPTEKCGNVIGKGGVIIAKIRQENGVKIRVD 81
Query: 165 DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDAL-LKVHDRIIEE 223
+ +PG +ERVI+I + KD +++ E K+++ + DA K D I EE
Sbjct: 82 EAVPGCDERVIVITIT--------EKDKEASREQGKQNVGGAAVSADAEHEKEKDHIKEE 133
Query: 224 DL 225
++
Sbjct: 134 NV 135
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
++ILC K G VIGKGG + +++QE G I V++A DERVI
Sbjct: 47 IRILCPTEKCGNVIGKGGVIIAKIRQENGVKIRVDEAVPGCDERVI 92
>gi|308804768|ref|XP_003079696.1| putative KH domain containing protein (ISS) [Ostreococcus tauri]
gi|116058152|emb|CAL53341.1| putative KH domain containing protein (ISS), partial [Ostreococcus
tauri]
Length = 709
Score = 147 bits (372), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 130/449 (28%), Positives = 213/449 (47%), Gaps = 59/449 (13%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
F R G G+ + + + E G A +R+LCP +IG VIGK G ++K+LR ET
Sbjct: 43 FARDGRGGVDRSAVAGWATE---GGRVNASVQFRLLCPVARIGRVIGKEGRVIKALRAET 99
Query: 158 QAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVH 217
A++ VA T G++ERV+++ S + DD ++ P A+ AL ++
Sbjct: 100 GARVKVAPTTRGADERVVLVASGEELM-----MDDGDGSDV------PVTTAERALFRIF 148
Query: 218 DRIIEED---LFG---GMASDDDN---ENSTI-------------TARLLVPNNMVGCLL 255
D + E L G G +S+ + E+S+ RLLVP VG L+
Sbjct: 149 DTVASESGGALDGTRDGTSSESGSGVPESSSTGGERSMNGGRAVPICRLLVPRAQVGSLI 208
Query: 256 GKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-----KPNVAKRALYEVST 310
GK G VI +R+ +GA +R++PA LP CA DE++QI+ N AL V +
Sbjct: 209 GKGGAVISAIRASSGATVRLMPATMLPTCASRGDELLQITAPVRDTDGNDVDLALASVKS 268
Query: 311 LLHQNPRKDKP-PSSFPQAYGGQNFHSP-PAPMADMHPLGNSSWPARNSSLHGMPSTPWM 368
L + + P+ + ++F SP A M + P N+ N + S+
Sbjct: 269 ALRMVAKNLREYPTKMATS---ESFRSPLEAFMLGIKPGANADGDGGNGAGIAGGSSGG- 324
Query: 369 GGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETG 428
+RM + P G E ++LC K G VIG+ G ++Q++ ETG
Sbjct: 325 ----HMSTRMNLNGVY-VPGG------TEIMFRLLCPVSKTGSVIGRNGEVIQQIRSETG 373
Query: 429 ASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT-ITTRLLVP 487
A + V + +++ER+I S+ + P A+ ++ + S + RLLV
Sbjct: 374 AKVKVCEQINNAEERIICVSSNDDGLAPMLAAQVALFRVYRCIVDSSGSDVPLPFRLLVQ 433
Query: 488 SSKVGCILGQGGHVINEMRRRTQADIRVV 516
+S++GC++G+GG +I ++R T A +RV+
Sbjct: 434 TSQIGCLIGKGGSIIRQIRNETGATVRVL 462
Score = 128 bits (321), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 170/364 (46%), Gaps = 54/364 (14%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ ++R+LCP K G VIG+ G +++ +R ET AK+ V + I +EER+I + S
Sbjct: 342 EIMFRLLCPVSKTGSVIGRNGEVIQQIRSETGAKVKVCEQINNAEERIICVSS------- 394
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+DD A P AAQ AL +V+ I+ D + + RLLV
Sbjct: 395 ----NDDGLA--------PMLAAQVALFRVYRCIV----------DSSGSDVPLPFRLLV 432
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP-NVAKRAL 305
+ +GCL+GK G +I+++R+ETGA +RVLP+D LP CA DE+++I P + +
Sbjct: 433 QTSQIGCLIGKGGSIIRQIRNETGATVRVLPSDALPACANADDELLEIGQWPADACALGI 492
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST 365
VS L N R ++ +P + D L S ++GM +
Sbjct: 493 RIVSGRLRGNMRHKAAERLNVESNVYSASMTPTMAVQDTPTLQQSEL-----MMYGMTA- 546
Query: 366 PWMGGYGDQPSRMGSGSIN-SCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQ 424
Y +P S++ S PP ++ V+ S+ + S+ IG V+G+GG N+ +
Sbjct: 547 -----YETEPVDTALASLSLSAPPVEIPGVTTVNSVHMTISSQHIGSVLGRGGCNISIAR 601
Query: 425 QETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRL 484
Q +GA I + P S R R+Q + +L++ + + S TI R
Sbjct: 602 QVSGARIKLY--PGASGRNGAR----------RAQDSERLLEISGTSEQVSSAQTIIERF 649
Query: 485 LVPS 488
+ S
Sbjct: 650 IASS 653
>gi|226529077|ref|NP_001146029.1| hypothetical protein [Zea mays]
gi|219885375|gb|ACL53062.1| unknown [Zea mays]
gi|414589866|tpg|DAA40437.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 624
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 126/393 (32%), Positives = 179/393 (45%), Gaps = 64/393 (16%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+LCPS + V +LR + D P +E V++I S P
Sbjct: 37 RLLCPSSR-----------VATLRPSRDLHV---DHPPVGDEAVLVI-SGP--------- 72
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
D+ A AA A V +E D G ++ + R+L
Sbjct: 73 --DTPA-----------AAVRAWEHVVGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGWQ 119
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLP-ADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VGC+LGK G ++R+R E GA IRV ++LPP A DE++ ISG + ++AL VS
Sbjct: 120 VGCVLGKGGKTVERMRQECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAVS 179
Query: 310 TLLHQNPRKD--KPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSW-PARNSSLHGMPSTP 366
T L NPR D P P G PP M P S+ P H
Sbjct: 180 TCLQDNPRPDTHNIPIGRPFGLPGSGTGCPPG----MDPHSQRSYLPPHIPDYHTR---- 231
Query: 367 WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQE 426
+ PS N+ PPG E +++ +G +IGKGG ++ LQ E
Sbjct: 232 ------NYPS-------NAGPPGPRFFFEQEIVFRMIILNEMVGSIIGKGGSTIRALQSE 278
Query: 427 TGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITT--RL 484
TGA I + + DSDERV+ +A E S DA++++ ++ SE S + T RL
Sbjct: 279 TGACIKILEPVADSDERVVAITARENSDMLHSPAQDAVVRVYSRISEASIDRSSHTPARL 338
Query: 485 LVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
LVPS +GC+LG+GG +I+EMR+ T A+IR+ G
Sbjct: 339 LVPSQHIGCLLGKGGSIISEMRKITGANIRIFG 371
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 97/379 (25%), Positives = 163/379 (43%), Gaps = 89/379 (23%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V+R++ + +G +IGK G+ +++L+ ET A I + + + S+ERV+ I
Sbjct: 249 EIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAI--------- 299
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
T ++ D H AQDA+++V+ RI E + + +S ARLLV
Sbjct: 300 TARENSDML----------HSPAQDAVVRVYSRISEASI---------DRSSHTPARLLV 340
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+ +GCLLGK G +I +R TGANIR+ +++P CA DEMVQ++G + AL
Sbjct: 341 PSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALL 400
Query: 307 EVSTLL-------------------------HQNPRKDKPPSSFPQA----YGGQNFHSP 337
++ + HQ+ ++ PP P Y F P
Sbjct: 401 HITGRIRDVILPKPHPSGGMPPYPPVGNIPVHQSRQEQPPPHLHPSGGMPPYPMHPFR-P 459
Query: 338 PAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSR--MGSGSINSCPPG------ 389
APM + P + G P++ G R + S +CPP
Sbjct: 460 DAPMGHFEMGDHRPPPVHSMEYMGADRMPYLYGVEQGGPRPFLEQPSPRTCPPEAPRTNS 519
Query: 390 ---------------QMGEVSAE-------FSMKILCSAGKIGGVIGKGGFNVKQLQQET 427
+ G V+ E + +++ IG V G G ++++++ +
Sbjct: 520 EVPRNMSDAVPATDFRKGPVAIENQVATPTGTTEVIIPCNYIGFVCGNNGSEIEEIEKMS 579
Query: 428 GASIHVEDAPT-DSDERVI 445
GASI V D D++ +V+
Sbjct: 580 GASITVHDPKAGDANSKVV 598
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 431 IHVEDAPTDSDERVIR-------ASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTR 483
+HV D P DE V+ A+A + ++ + + E G + R
Sbjct: 54 LHV-DHPPVGDEAVLVISGPDTPAAAVRAWEHVVGHRVEGDEAMGGEEEEREVTGAVGCR 112
Query: 484 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+L +VGC+LG+GG + MR+ A IRV R +L P E ++ I GS
Sbjct: 113 MLAAGWQVGCVLGKGGKTVERMRQECGAQIRVFRNREQLPPWAPPGDE-LIHISGS 167
>gi|357485457|ref|XP_003613016.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355514351|gb|AES95974.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 596
Score = 147 bits (370), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 123/429 (28%), Positives = 202/429 (47%), Gaps = 57/429 (13%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +R++C S +GG+IG +G+IV LR ET KI D + G+++RVI++ S +
Sbjct: 36 PGQIAFRLVCHSSTVGGLIGSSGSIVSQLRRETGCKIHCEDAVVGTDDRVILVIGSMS-- 93
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
D ME AQ+ +++V DR+ G+ S+ N + +L
Sbjct: 94 -------DRKGIVLGDREMEV-SNAQEGVVRVFDRV------WGLESEKGG-NGEVYGKL 138
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L ++ VG ++GK G I +R+ +G+NIRV PA P CA +E++ I+G+ K+A
Sbjct: 139 LAHSSQVGAIVGKGGKNISNIRNNSGSNIRVCPA---PHCAAKDEELILITGESLAVKKA 195
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSS---WPARNSSLHG 361
L VS L +D PP G + ++PP + + +P NS L
Sbjct: 196 LIYVSYCL-----QDCPP------MGKVSLNTPPTINSSDRSTSYTHEDLFPHLNSWLPS 244
Query: 362 MPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVK 421
M + G+ S++S G ++LCS G VIGK G V+
Sbjct: 245 MEGLSINDASKQTTNANGNSSLDSKGSGHA------VVFRLLCSNNVAGSVIGKKGSIVR 298
Query: 422 QLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSE-------- 473
+ TGASI +ER++ SAFE L + S DA++ + + +E
Sbjct: 299 TFEIRTGASIVFAPPLGQYEERIVTISAFENLESSNSPAQDAVILVFTRIAEDHIRNGFQ 358
Query: 474 --FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSS- 530
+ + +T RLL+ +S + + G G VI+E+R+ + ADI+++ +P P +S
Sbjct: 359 PATAVESPVTARLLITTSTLHLLTGNEGQVISELRQVSGADIQLLHG-----EPIPNASD 413
Query: 531 -ECIVDIRG 538
+ +V I G
Sbjct: 414 NDVVVQITG 422
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 142/319 (44%), Gaps = 45/319 (14%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
V+R+LC + G VIGK G+IV++ T A I A + EER++ I
Sbjct: 275 VVFRLLCSNNVAGSVIGKKGSIVRTFEIRTGASIVFAPPLGQYEERIVTI---------- 324
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
SA E + S P AQDA++ V RI E+ + G E S +TARLL+
Sbjct: 325 ------SAFENLESSNSP---AQDAVILVFTRIAEDHIRNGFQPATAVE-SPVTARLLIT 374
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ + L G G VI LR +GA+I++L + +P + N D +VQI+G + AL +
Sbjct: 375 TSTLHLLTGNEGQVISELRQVSGADIQLLHGEPIPNASDN-DVVVQITGGYRCVENALRK 433
Query: 308 VSTLLHQNP--------RKDKPPSSFPQAYGGQNF---HSPPAPMADMHPLGNSSWPARN 356
+++++ NP K KP + F P A + P + A+
Sbjct: 434 ITSIIRDNPLTNELLAEAKIKPSFPLNKDTVRSKFITRKKSSFPFARVPPQNAGVYQAKK 493
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
+ +G T + +P R G + +++I+ S G V G+
Sbjct: 494 VTENGESHTNLIENV--EPGR-----------GNIVATVTNTTVEIIVSEHVFGSVYGED 540
Query: 417 GFNVKQLQQETGASIHVED 435
G N+ +++Q +GA + V D
Sbjct: 541 GGNLDRIRQISGADVTVFD 559
>gi|414589867|tpg|DAA40438.1| TPA: hypothetical protein ZEAMMB73_485730 [Zea mays]
Length = 640
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 125/394 (31%), Positives = 177/394 (44%), Gaps = 64/394 (16%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+LCPS + V +LR + D P +E V++I S P A
Sbjct: 36 LRLLCPSSR-----------VATLRPSRDLHV---DHPPVGDEAVLVI-SGPDTPA---- 76
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
AA A V +E D G ++ + R+L
Sbjct: 77 ------------------AAVRAWEHVVGHRVEGDEAMGGEEEEREVTGAVGCRMLAAGW 118
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLP-ADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
VGC+LGK G ++R+R E GA IRV ++LPP A DE++ ISG + ++AL V
Sbjct: 119 QVGCVLGKGGKTVERMRQECGAQIRVFRNREQLPPWAPPGDELIHISGSFSQVRKALLAV 178
Query: 309 STLLHQNPRKD--KPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSW-PARNSSLHGMPST 365
ST L NPR D P P G PP M P S+ P H
Sbjct: 179 STCLQDNPRPDTHNIPIGRPFGLPGSGTGCPPG----MDPHSQRSYLPPHIPDYHTR--- 231
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
+ PS N+ PPG E +++ +G +IGKGG ++ LQ
Sbjct: 232 -------NYPS-------NAGPPGPRFFFEQEIVFRMIILNEMVGSIIGKGGSTIRALQS 277
Query: 426 ETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITT--R 483
ETGA I + + DSDERV+ +A E S DA++++ ++ SE S + T R
Sbjct: 278 ETGACIKILEPVADSDERVVAITARENSDMLHSPAQDAVVRVYSRISEASIDRSSHTPAR 337
Query: 484 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
LLVPS +GC+LG+GG +I+EMR+ T A+IR+ G
Sbjct: 338 LLVPSQHIGCLLGKGGSIISEMRKITGANIRIFG 371
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 104/415 (25%), Positives = 174/415 (41%), Gaps = 103/415 (24%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V+R++ + +G +IGK G+ +++L+ ET A I + + + S+ERV+ I
Sbjct: 249 EIVFRMIILNEMVGSIIGKGGSTIRALQSETGACIKILEPVADSDERVVAI--------- 299
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
T ++ D H AQDA+++V+ RI E + + +S ARLLV
Sbjct: 300 TARENSDML----------HSPAQDAVVRVYSRISEASI---------DRSSHTPARLLV 340
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+ +GCLLGK G +I +R TGANIR+ +++P CA DEMVQ++G + AL
Sbjct: 341 PSQHIGCLLGKGGSIISEMRKITGANIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDALL 400
Query: 307 EVSTLL-------------------------HQNPRKDKPPSSFPQA----YGGQNFHSP 337
++ + HQ+ ++ PP P Y F P
Sbjct: 401 HITGRIRDVILPKPHPSGGMPPYPPVGNIPVHQSRQEQPPPHLHPSGGMPPYPMHPFR-P 459
Query: 338 PAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSR--MGSGSINSCPPG------ 389
APM + P + G P++ G R + S +CPP
Sbjct: 460 DAPMGHFEMGDHRPPPVHSMEYMGADRMPYLYGVEQGGPRPFLEQPSPRTCPPEAPRTNS 519
Query: 390 ---------------QMGEVSAE-------FSMKILCSAGKIGGVIGKGGFNVKQLQQET 427
+ G V+ E + +++ IG V G G ++++++ +
Sbjct: 520 EVPRNMSDAVPATDFRKGPVAIENQVATPTGTTEVIIPCNYIGFVCGNNGSEIEEIEKMS 579
Query: 428 GASIHVEDAPT-DSDERVIRA-------------SAFEGLWNPRSQTIDAILQLQ 468
GASI V D D++ +V+ S LW+ S ID ++ +Q
Sbjct: 580 GASITVHDPKAGDANSKVVICGDPRRNKEGTEPDSCLHILWS-VSNIIDDLITVQ 633
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 51/116 (43%), Gaps = 9/116 (7%)
Query: 431 IHVEDAPTDSDERVIR-------ASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTR 483
+HV D P DE V+ A+A + ++ + + E G + R
Sbjct: 54 LHV-DHPPVGDEAVLVISGPDTPAAAVRAWEHVVGHRVEGDEAMGGEEEEREVTGAVGCR 112
Query: 484 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+L +VGC+LG+GG + MR+ A IRV R +L P E ++ I GS
Sbjct: 113 MLAAGWQVGCVLGKGGKTVERMRQECGAQIRVFRNREQLPPWAPPGDE-LIHISGS 167
>gi|356529691|ref|XP_003533422.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 611
Score = 146 bits (369), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 134/431 (31%), Positives = 202/431 (46%), Gaps = 47/431 (10%)
Query: 99 KRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQ 158
KRK N SN+ R P +R++C + +GG+IG +G+IV LR ET
Sbjct: 23 KRKTTTTTTTTNRSNNKR--PVFKVLPGQIAFRLVCHASIVGGLIGSSGSIVSQLRRETA 80
Query: 159 AKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHD 218
KI D++ +E+RVI++ S + Q D E + S AQ+A+++V +
Sbjct: 81 CKIHCEDSLSSAEDRVILVIGSVSPRKGLQLGD---GGEVEVSS------AQEAIVRVFE 131
Query: 219 RIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA 278
R+ + G+ S + NS + ++LL + +G ++GK G I +R+ TGA IRV P
Sbjct: 132 RVWGLEAEKGVNS-NRAVNSEVFSKLLAHTSQIGAVVGKGGKNITAIRNSTGAKIRVCPP 190
Query: 279 DRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPP--SSFPQAYGGQNF-H 335
P CA +E+V I+G K+AL VS L P K P SS P +F
Sbjct: 191 ---PQCATKDEELVLITGGILAVKKALISVSHCLQDCPPLCKVPVSSSIPTV---SSFDR 244
Query: 336 SPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVS 395
S P A++ P NS +S+ G+ + +R G GE
Sbjct: 245 SSSDPNAELFPRLNSLL----TSMEGLSIYERTTNSNESSNRDSKG----------GE-- 288
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E ++LCS G VIGK G V+ L+ +TGASI ++ ER++ SA E L +
Sbjct: 289 HEVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAPLSEHAERIVTISAIESLES 348
Query: 456 PRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
S DA++ + + E S + +T RLLV +S V G G VI E+
Sbjct: 349 CNSPAQDAVILVFARIIEDHIGKGFLQVSSMESPVTARLLVATSTVNSWSGNEGQVILEL 408
Query: 506 RRRTQADIRVV 516
R T ADI+++
Sbjct: 409 REVTGADIQIL 419
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 96/332 (28%), Positives = 153/332 (46%), Gaps = 37/332 (11%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
N + SS S G + V+R+LC + G VIGK G IV++L +T A I A +
Sbjct: 275 NSNESSNRDSKGGEH--EVVFRLLCSNNVAGSVIGKRGAIVRALESKTGASIIFAAPLSE 332
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
ER++ I SA E+ + P AQDA++ V RIIE+ + G
Sbjct: 333 HAERIVTI----------------SAIESLESCNSP---AQDAVILVFARIIEDHIGKGF 373
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
E S +TARLLV + V G G VI LR TGA+I++L + +P A + D
Sbjct: 374 LQVSSME-SPVTARLLVATSTVNSWSGNEGQVILELREVTGADIQILHGESVPNGASDDD 432
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADM-HPLG 348
+VQI+G+ + ALY++++ + N P + +A N+ P+ G
Sbjct: 433 VVVQITGEYRCVQNALYKITSRIRDNL---SPNEAVTEARPKSNWKVNKDPVKGKPFSRG 489
Query: 349 NSSWPA-----RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKIL 403
S++P+ RN+ +H + D + G G M +++I+
Sbjct: 490 KSAFPSGRFLPRNAGVHAETILQNGELHTDLSENLERGR------GNMFATVTNTTVEII 543
Query: 404 CSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
S G V G+ G N+ +++Q +GA++ V D
Sbjct: 544 VSEHVFGSVYGEDGGNLDRIRQISGATVTVYD 575
>gi|224095794|ref|XP_002310483.1| predicted protein [Populus trichocarpa]
gi|222853386|gb|EEE90933.1| predicted protein [Populus trichocarpa]
Length = 747
Score = 144 bits (363), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 134/416 (32%), Positives = 206/416 (49%), Gaps = 57/416 (13%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
++R+LC +IGG+IGK GNI+K L+++T AKI + D S +RVI I S T+ +
Sbjct: 58 VLFRLLCHDSRIGGIIGKGGNIIKGLQQQTGAKIRIEDAPLESPDRVITIVGSVTQ-SSV 116
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
SA E K Q+AL++V +RI+E A D ++ RLL
Sbjct: 117 VFSGIGSAIEVSK--------GQEALVRVFERILEV-----AAESDSVAGGLVSCRLLAE 163
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ VG ++GK G ++++R + G ++VL D+LP CA + +EM++I G + K+ L
Sbjct: 164 ISSVGAVIGKGGKTVEKIRKDCGCKVKVL-IDKLPACASSNEEMIEIEGDVSAVKKGLVA 222
Query: 308 VSTLLH--QNPRKDKPPSSFP-QAYGGQNF----------HSPPAPMADMHPLGNSSWPA 354
VS L Q K + SS P +A +F HS P H + +
Sbjct: 223 VSHRLQDCQPVDKTRVISSKPVEAVSRVSFPEVGVEILPQHSAVRPTIAQHSVAPPT--V 280
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
NSS+ T ++ S ++++ P Q + +ILC+ ++GGVIG
Sbjct: 281 TNSSIDYASGTHLFSLESERVS-----TLDTSTPQQ------QVVFRILCNNDRVGGVIG 329
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDA----ILQLQNK 470
KGG V LQ ETGA+I + DER+I +A E NP S+ A +L
Sbjct: 330 KGGNIVTALQNETGATISIGPKVAGCDERLITVTASE---NPESRYSAAQKTVVLVFSRV 386
Query: 471 TSEFSEKGT---------ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
EKG ++ RL+V ++VGC+LG+GG +I+EMR+ T IR++G
Sbjct: 387 VESVIEKGLDPGSSEGSPVSVRLVVSPNQVGCLLGKGGTIISEMRKATSTSIRIIG 442
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 87/163 (53%), Gaps = 25/163 (15%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI--------R 446
S ++LC +IGG+IGKGG +K LQQ+TGA I +EDAP +S +RVI
Sbjct: 55 SGHVLFRLLCHDSRIGGIIGKGGNIIKGLQQQTGAKIRIEDAPLESPDRVITIVGSVTQS 114
Query: 447 ASAFEGLWNP--RSQTIDAILQLQNKTSEFSEK------GTITTRLLVPSSKVGCILGQG 498
+ F G+ + S+ +A++++ + E + + G ++ RLL S VG ++G+G
Sbjct: 115 SVVFSGIGSAIEVSKGQEALVRVFERILEVAAESDSVAGGLVSCRLLAEISSVGAVIGKG 174
Query: 499 GHVINEMRRRTQADIRVVGARVKLQDPHPG---SSECIVDIRG 538
G + ++R+ ++V L D P S+E +++I G
Sbjct: 175 GKTVEKIRKDCGCKVKV------LIDKLPACASSNEEMIEIEG 211
>gi|169647179|gb|ACA61608.1| hypothetical protein AP1_E07.1 [Arabidopsis lyrata subsp. petraea]
Length = 532
Score = 142 bits (357), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 113/350 (32%), Positives = 172/350 (49%), Gaps = 71/350 (20%)
Query: 113 NSSREQSFGNSQ----PADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI 167
+S R F +S+ A++V +R+LCP+ + G +IGK G++++ L+ T +KI V D I
Sbjct: 222 DSGRLMEFSSSKRPATAAESVHFRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDI 281
Query: 168 PG-SEERVIIIYSSPTKIAKTQNKDDDS--------AAETKKESMEPHCA---------- 208
P SEERV++I IA + K DDS ++E K+ CA
Sbjct: 282 PVPSEERVVLI------IAPSGKKKDDSNVFDSENPSSEEPKQEKGSECAGTSGGDDEEA 335
Query: 209 ---AQDALLKVHDRIIEEDLFGGMASDD-DNENSTITARLLVPNNMVGCLLGKRGDVIQR 264
AQ ALL+V +RI+ D + D D S R++V N V L+ K G +IQR
Sbjct: 336 PSSAQMALLRVLERIVFGDDAASVDGDGLDKGESESLCRMIVRGNQVDFLMSKGGKMIQR 395
Query: 265 LRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQN---PRKDKP 321
+R ++GA +R+ D++PPCA D ++QI+GK + K+AL ++ L ++ P D+
Sbjct: 396 IREDSGAIVRISSTDQIPPCAFPGDVVIQITGKFSSVKKALLLITNCLQESGAPPTWDEC 455
Query: 322 PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSG 381
P FPQ ++HS + HP + P+ M
Sbjct: 456 P--FPQPGYPPDYHS-----MEYHP-----------------------QWDHPPNPMPED 485
Query: 382 SINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASI 431
+ P V E S ++LC A K+G +IGKGG V+ LQ E+GASI
Sbjct: 486 VV----PFNRPVVEEEVSFRLLCPADKVGSLIGKGGAVVRALQNESGASI 531
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERVIRASAFEGLWNPRS 458
++LC A + G +IGKGG ++ LQ TG+ I V +D P S+ERV+ A G S
Sbjct: 244 FRLLCPASRTGAIIGKGGSVIRHLQSVTGSKIRVIDDIPVPSEERVVLIIAPSGKKKDDS 303
Query: 459 QTIDAILQLQNKTSE 473
D+ +N +SE
Sbjct: 304 NVFDS----ENPSSE 314
>gi|297821485|ref|XP_002878625.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
gi|297324464|gb|EFH54884.1| KH domain-containing protein [Arabidopsis lyrata subsp. lyrata]
Length = 633
Score = 139 bits (351), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 131/458 (28%), Positives = 203/458 (44%), Gaps = 55/458 (12%)
Query: 107 KKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT 166
++G + S+ + + P +T R++C + IGG+IG G +V LR ET KI
Sbjct: 4 RRGVTTAVSKRRPVIHVLPDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESP 63
Query: 167 IPGSEERVIIIYSSPT---KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDR---I 220
+ GS+ V+ I S + T D S E + AAQ AL++V +R +
Sbjct: 64 VNGSDHWVVFIVGSTAVNKSVLLTDRVGDFSGGEHEDWVTCDVSAAQTALIRVLERSWVV 123
Query: 221 IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
+ GG+ D E+ +L N +G +LG G ++ +R +GA IRVLP
Sbjct: 124 LAAKDGGGVV---DGEDEEAYCGILADRNQIGAVLGLGGKNVEWMRRSSGAMIRVLPP-- 178
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQ-----AYGGQNFH 335
P C NTDE++QI+G K+AL VST + NP P + +PQ AY
Sbjct: 179 -PICGTNTDELIQITGDVLAVKKALVMVSTCIQDNP----PVNGYPQPLCIKAYESSTDG 233
Query: 336 SPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVS 395
+ P ++ P SS P + S P + G+ R
Sbjct: 234 NSEDPHSEFFPNLRSSVPNASDSASSNRHLPAVYDEGNGTER------------------ 275
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
+ KI+ ++ GG+IGK G ++ LQ ETGASI + S ERV+ SA E L +
Sbjct: 276 -KVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISIGAPLKVSGERVVTISARENLES 334
Query: 456 PRSQTIDAILQLQNKTSEFS-EKG---------TITTRLLVPSSKVGCILGQGGHVINEM 505
S +A+ + ++ E EKG + T+LLVPS ++G G E
Sbjct: 335 RYSHAQNALALVFARSVEIDVEKGLRPGLHNGAVVKTKLLVPSQFANSLVGNGNR---EA 391
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
T AD+ + L+ +E +++I+G H+
Sbjct: 392 IIATGADVHIPVDNQILE--WISENEVVIEIKGEYGHV 427
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 96/202 (47%), Gaps = 29/202 (14%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
GN V++I+ S GG+IGK G I+++L+ ET A I++ + S ERV+ I
Sbjct: 270 GNGTERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISIGAPLKVSGERVVTI--- 326
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
+A ES H AQ+AL V R +E D+ G+ N + +
Sbjct: 327 --------------SARENLESRYSH--AQNALALVFARSVEIDVEKGLRPGLHN-GAVV 369
Query: 241 TARLLVPNNMVGCLL--GKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+LLVP+ L+ G R +I TGA++ + +++ + +++I G+
Sbjct: 370 KTKLLVPSQFANSLVGNGNREAIIA-----TGADVHIPVDNQILEWISENEVVIEIKGEY 424
Query: 299 NVAKRALYEVSTLLHQN--PRK 318
++AL VS+ L +N P+K
Sbjct: 425 GHVQKALTHVSSKLRENLLPKK 446
>gi|115475229|ref|NP_001061211.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|38636959|dbj|BAD03220.1| putative KH domain protein [Oryza sativa Japonica Group]
gi|113623180|dbj|BAF23125.1| Os08g0200400 [Oryza sativa Japonica Group]
gi|215695475|dbj|BAG90642.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 441
Score = 139 bits (349), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 92/276 (33%), Positives = 148/276 (53%), Gaps = 31/276 (11%)
Query: 286 MNTDEMVQISGKPNVAKRALYEVSTLLHQNPRK----------DKPPS----SFPQAYGG 331
M+ D VQI+G ++AL+ VST++++ P K D PPS S Y
Sbjct: 1 MSFDNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPS 60
Query: 332 QNFHSPP-APMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRM--GSGSINSCPP 388
NF+SP A ++ HP S L P P + D SR+ + P
Sbjct: 61 SNFYSPSDAAISSGHP--------SLSILGSTPHVPELTVSADAHSRLPIYQSVLPVIPA 112
Query: 389 GQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS 448
+ S E +++LC AGKIG VIGKGG +K +++E+GA I V+D+ D +E +I +
Sbjct: 113 YNTPKCSGELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITIT 172
Query: 449 AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+ E + +S ++A+L LQ+K ++ +E G + RLLVP +GC++G+GG ++N+MR +
Sbjct: 173 SNEATDDAKSAAVEAVLLLQSKINDDNE-GKMNLRLLVPGKVIGCLIGKGGSIVNDMRSK 231
Query: 509 TQADIRVVGARVKLQDPHPG-SSECIVDIRGSSEHL 543
T+A I + K + P SS+ +V++ G E+L
Sbjct: 232 TKAAIYI----SKGEKPRKASSSDELVEVFGEVENL 263
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 94/342 (27%), Positives = 149/342 (43%), Gaps = 61/342 (17%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V R+LCP+ KIG VIGK G +KS+R+E+ A+I V D+ EE +I I
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITI--------- 171
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
T N+ D A AA +A+L + +I +DDNE + RLLV
Sbjct: 172 TSNEATDDA----------KSAAVEAVLLLQSKI-----------NDDNEGK-MNLRLLV 209
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P ++GCL+GK G ++ +RS+T A I + ++ P A ++DE+V++ G+ + AL
Sbjct: 210 PGKVIGCLIGKGGSIVNDMRSKTKAAIYISKGEK-PRKASSSDELVEVFGEVENLRDALV 268
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPA------------ 354
++ L + +D + G +A PL SS+P
Sbjct: 269 QIVLRLRDDVLRDSVDRQNSEKDGKLT-------VATTDPLYASSYPLPALLPYRQQITP 321
Query: 355 -----RNSSLHGMPSTPWMGGYGD---QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
R G+ P YG Q G +++S G M I S
Sbjct: 322 LGYDHRGDIERGLEVYPHSSLYGYSSLQAIDDGYSAVSSYASKGYGGRPPHMEMTIPASG 381
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS 448
+ V+GK G N+ + + +GA I + ++ + V R S
Sbjct: 382 --LSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGHVARIS 421
>gi|147789387|emb|CAN73316.1| hypothetical protein VITISV_043333 [Vitis vinifera]
Length = 511
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 78/231 (33%), Positives = 129/231 (55%), Gaps = 32/231 (13%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSP 181
S+ DT+YR LCP +KIG +I + IVK R +T+ KI++ DT+ G EE V+ IY+
Sbjct: 286 TSRLKDTIYRYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYN-- 343
Query: 182 TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
+ N D+S Q+ L +VHDR+I +++ D++ E ++
Sbjct: 344 --FSIESNVFDNSNTFVS--------PTQNVLFRVHDRVISDEVH-----DENFEEAS-- 386
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
+GC++GK G +IQ +RSE+GA IR+L D LP +++D+++QISG+P++
Sbjct: 387 --------QIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSRVLSSDKLIQISGEPSLV 438
Query: 302 KRALYEVSTLLHQNPRKDK--PPSSFPQAY-GGQNFHSPP--APMADMHPL 347
+ALY++++ LH NP + + + P Y G + P AP+ + PL
Sbjct: 439 MKALYQIASRLHDNPSQSQHLLVXTMPTGYSSGGSLMGPTSSAPIMGLAPL 489
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 52/224 (23%), Positives = 95/224 (42%), Gaps = 32/224 (14%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV-------IRASAFEGL 453
+ LC KIG +I +G VKQ + +T I + D + +E V I ++ F+
Sbjct: 295 RYLCPGKKIGSIIRRGWKIVKQQRVDTKPKISIGDTVSGCEEHVVTIYNFSIESNVFDNS 354
Query: 454 WNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
S T + + ++ ++ S++ + +S++GC++G+GG +I +R + A I
Sbjct: 355 NTFVSPTQNVLFRVHDRV--ISDE--VHDENFEEASQIGCVIGKGGQIIQSIRSESGAQI 410
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQNINPQ 573
R+ L+D H S SS+ LI G M + Q +S + NP
Sbjct: 411 RI------LKDDHLPSRVL------SSDKLIQISGEPSLVMKA----LYQIASRLHDNPS 454
Query: 574 QSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSY 617
QS + + + Y + + P +P + P +Y
Sbjct: 455 QSQHLLVXTMPTGYSSGGSLMGP-----TSSAPIMGLAPLVGTY 493
>gi|384253488|gb|EIE26963.1| hypothetical protein COCSUDRAFT_59455 [Coccomyxa subellipsoidea
C-169]
Length = 648
Score = 135 bits (339), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 123/418 (29%), Positives = 187/418 (44%), Gaps = 74/418 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
YR+LCP+ +IG VIGK G++++ +R+ T A+I V + G ER+I + SS
Sbjct: 33 YRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEVAGCSERLISLSSS--------- 83
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
D+ AE C AQ+AL V R+ E +D E++ R+LV
Sbjct: 84 --DEPGAEL--------CRAQEALFAVQSRLSE--------ADAAQEDTCCVVRMLVEQA 125
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VGC+LGK G+VI LR TGANIRV LP CA + D +V + G+ AL ++S
Sbjct: 126 QVGCVLGKGGEVISDLRRRTGANIRVSDKRDLPACAGSEDSLVAVKGEAQAVSDALRQLS 185
Query: 310 TLL----HQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWP--ARNSSLHG-M 362
LL + P++ + P +F P P+ AR H +
Sbjct: 186 ALLRTHSQRKPQQARAPMTFNITAVATAAVQPEQAQHRRQPMREPVLAPIARPHQCHNCL 245
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
P M QP RM + Q E +++L A IG VIG+ G ++
Sbjct: 246 PDAHAM-----QP-RMTA--------VQEASAVVEVQLRLLVPATHIGCVIGRRGEMIRT 291
Query: 423 LQQETGASIHVEDA--------PTDSD--ERVIRASAFEGLWNPRSQTIDAILQLQNKTS 472
++ +TGA I V + P++ +RVI +A E S T +A+ +
Sbjct: 292 IRDDTGAHIKVHEGSQGARAFPPSEKKGVDRVITVAAAEAAGAAVSPTEEAVCLM--ALC 349
Query: 473 EFSEKG---TITTRLLVPSS-----------KVGCILGQGGHVINEMRRRTQADIRVV 516
G R+LVP+ +VG +LG+GG I ++R+ + A +R+V
Sbjct: 350 LLGPSGLPPVPCIRILVPTPQGGTAEALSLLQVGGVLGKGGATITQVRKDSGAGVRLV 407
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 100/201 (49%), Gaps = 21/201 (10%)
Query: 378 MGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP 437
M +G + G M E ++LC A +IG VIGKGG ++Q++ TGA I VE
Sbjct: 17 MEAGVVKRSAAGAMVE------YRLLCPATRIGTVIGKGGSVIQQMRDSTGARIKVEPEV 70
Query: 438 TDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---EKGTITTRLLVPSSKVGCI 494
ER+I S+ + + +A+ +Q++ SE E R+LV ++VGC+
Sbjct: 71 AGCSERLISLSSSDEPGAELCRAQEALFAVQSRLSEADAAQEDTCCVVRMLVEQAQVGCV 130
Query: 495 LGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFM 554
LG+GG VI+++RRRT A+IRV R P + GS + L++ G Q+
Sbjct: 131 LGKGGEVISDLRRRTGANIRVSDKR-----DLPACA-------GSEDSLVAVKGEAQAVS 178
Query: 555 TSGQSMKVQPSSYQNINPQQS 575
+ + + ++ PQQ+
Sbjct: 179 DALRQLSALLRTHSQRKPQQA 199
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 96/378 (25%), Positives = 152/378 (40%), Gaps = 91/378 (24%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITV------ADTIPGSE----ERVIIIYS 179
R+L P+ IG VIG+ G +++++R++T A I V A P SE +RVI + +
Sbjct: 269 LRLLVPATHIGCVIGRRGEMIRTIRDDTGAHIKVHEGSQGARAFPPSEKKGVDRVITVAA 328
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHD-------RIIEEDLFGGMASD 232
+ A + E C LL RI+ GG A
Sbjct: 329 AEAAGAAVSPTE------------EAVCLMALCLLGPSGLPPVPCIRILVPTPQGGTAE- 375
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA----DRLPP---CA 285
LL VG +LGK G I ++R ++GA +R++P DR P A
Sbjct: 376 --------ALSLL----QVGGVLGKGGATITQVRKDSGAGVRLVPLEAEDDRWLPRDVAA 423
Query: 286 MNTDEMVQISGKPNVAKRALYEVSTLL---HQNPRKDKPPSSFPQAYGGQNFHSPPAPMA 342
++VQI G +A+ V L + +P +AYGG H+P
Sbjct: 424 GQMHKVVQIEGPITATVKAVRAVCAQLRAWQARSQGAQPARELTEAYGG--AHAP----Q 477
Query: 343 DMHPLGNSSWPARNS---SLHGMP--STPWMGGYGDQPSR-----------------MGS 380
HP+ + P + G+P S MG Y D P R +
Sbjct: 478 QFHPMHQAMLPRETAPGLRGRGLPDLSRAEMGMY-DSPLRHCERPVLQLRHPLDLQVLSR 536
Query: 381 GSINSC--PPGQMGEVSAEF--------SMKILCSAGKIGGVIGKGGFNVKQLQQETGAS 430
G ++ P M +V+ + S ++ ++G V+GK G N+ Q+++ +GA
Sbjct: 537 GQMDRAMSQPLMMQQVTQQVVTAPDQTQSCELRLVGVQVGCVLGKAGENITQIRKISGAR 596
Query: 431 IHVEDAPTDSDERVIRAS 448
+ + DAP ER++R S
Sbjct: 597 VKLSDAPRGVTERLLRLS 614
Score = 46.2 bits (108), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 46/81 (56%), Gaps = 7/81 (8%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L + +VGC+LG+ G I ++R+ + GARVKL D G +E ++ + G
Sbjct: 563 TQSCELRLVGVQVGCVLGKAGENITQIRK-------ISGARVKLSDAPRGVTERLLRLSG 615
Query: 539 SSEHLISAHGTYQSFMTSGQS 559
+ E + +A Q+F+ +G++
Sbjct: 616 TCEQVQAAVNLVQAFLLAGRA 636
>gi|357124311|ref|XP_003563844.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 666
Score = 134 bits (338), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 122/411 (29%), Positives = 192/411 (46%), Gaps = 64/411 (15%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T +RILCP K G A I+K+ ++++ A IT+ G RVI ++A
Sbjct: 93 TSFRILCPESKTYGF--PASFIIKA-QDDSGAIITIHAPFAGDPVRVI-------EMADG 142
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIE-------EDLFGGMASDDDNENSTI 240
+D D + P AQ+AL+ VH RI+E ED G D + +
Sbjct: 143 VPRDVDG----RPPMFSP---AQEALIMVHRRILETEPDDGDEDGEYGPRGKDARDRGKV 195
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDEMVQISGKPN 299
T RL+VP VGCLLGK G +I+++RSET +IR+LP D+ P C ++E+VQI G+ N
Sbjct: 196 TTRLVVPRLHVGCLLGKGGKIIEQMRSETKTHIRILPRDQNTPRCVSLSEEVVQIVGEGN 255
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
K+A+ +S L ++ +D+ P + G+N AD +
Sbjct: 256 CVKKAVAIISDRLKESLHRDRGP------FRGRNSPEHRISQADEY-------------- 295
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSA------------EFSMKILCSAG 407
MP+ DQ GS PPG + + E +ILC
Sbjct: 296 QQMPAYEEPFARFDQIRNNGSME----PPGYEFDSNGSKFNEHPEFPYDEIIFRILCPND 351
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
K ++G ++ LQ E G + + D SDER + ++ EG + +A+L +
Sbjct: 352 KANNLVGSRDGILEMLQVEVGVDVRLTDLVVGSDERTVIITSREGPDHELFPAQEALLHI 411
Query: 468 QNKTSEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
Q + ITTRLLVPSS+V C G+ G +++++R+T A+++++
Sbjct: 412 QTHIVDLGPDNDNIITTRLLVPSSEVACFEGRDGS-LSDIQRQTSANVQIL 461
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 109/217 (50%), Gaps = 38/217 (17%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ ++RILCP+ K ++G I++ L+ E + + D + GS+ER +II S
Sbjct: 341 EIIFRILCPNDKANNLVGSRDGILEMLQVEVGVDVRLTDLVVGSDERTVIITSR------ 394
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
E + P AQ+ALL + I++ + D+DN IT RLLV
Sbjct: 395 ----------EGPDHELFP---AQEALLHIQTHIVD------LGPDNDN---IITTRLLV 432
Query: 247 PNNMVGCLLGKRGDV--IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
P++ V C G+ G + IQR +T AN+++LP + LP CA+ +DE++QI G A+ A
Sbjct: 433 PSSEVACFEGRDGSLSDIQR---QTSANVQILPREELPSCALESDELIQIVGGIRAARSA 489
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHS--PPA 339
L +V+T + ++ S P N H PPA
Sbjct: 490 LMQVTTKIRSYIYREM---SVPNQIASINVHGSIPPA 523
>gi|147817258|emb|CAN62067.1| hypothetical protein VITISV_030085 [Vitis vinifera]
Length = 288
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/192 (38%), Positives = 110/192 (57%), Gaps = 16/192 (8%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
G ++P ++RILCP+ K GGVIGK G I++ RE+T AKI + D++ G +ERVI+I +
Sbjct: 94 GAAKP-QVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVAD 152
Query: 181 PTK-------IAKTQNKDDDSAAETKKESMEPHCA-------AQDALLKVHDRIIEEDLF 226
K I + D + +A + S P AQ AL++V +RI++ D
Sbjct: 153 AVKSKREASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEE 212
Query: 227 GGMASDD-DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCA 285
D N + RLL P+N VGC+LG+ G +++++R E+GA IRVLP D +P CA
Sbjct: 213 REEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACA 272
Query: 286 MNTDEMVQISGK 297
DE++Q+ K
Sbjct: 273 SPGDELIQVVHK 284
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 82/170 (48%), Gaps = 45/170 (26%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI------ 445
G + +ILC A K GGVIGKGG ++Q +++TGA I ++D+ DERVI
Sbjct: 94 GAAKPQVLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADA 153
Query: 446 -----RASAFEG-----------LWN--PRSQTID---------AILQLQNKTSEFSEKG 478
ASA G L N P +D A++++ + + E+
Sbjct: 154 VKSKREASAICGAEANDGEESANLRNSSPNPVAVDDDESSPAQQALVRVFERILKVDEER 213
Query: 479 ------------TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ RLL PS++VGC+LG+GG ++ ++R+ + A IRV+
Sbjct: 214 EEKEKKEDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVL 263
>gi|297742912|emb|CBI35779.3| unnamed protein product [Vitis vinifera]
Length = 340
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 98/330 (29%), Positives = 157/330 (47%), Gaps = 79/330 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R++CP R IGGVI K G + +R E+ A I V T
Sbjct: 45 LRLVCPIRNIGGVIRKGGVFINQIRRESGAIIKVDST-------------------SAAE 85
Query: 190 KDDDSAAETKKESME----PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
DD KE + P + L ++ R+ D + + T T RLL
Sbjct: 86 ADDCLVTILAKERLHFPRGPQTSHCIFLYRMCMRL----------WDWNCPSGTFTVRLL 135
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
V N +GC++GK G +IQ +RSE+GA IR+L D LP C+++++E++QIS +P++ ++ L
Sbjct: 136 VSFNQIGCVIGKGGQIIQSIRSESGAQIRILKDDHLPSCSLSSNELIQISKEPSIVRKIL 195
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPS- 364
Y++++ LH NP + + + + P+G SS + SL G+ S
Sbjct: 196 YQIASRLHDNPSRSQHLFVY------------------VVPIGYSS----SGSLMGLTSG 233
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQ 424
P M D+ S S EFS+ ++C G IGG+IGKG + Q++
Sbjct: 234 APIM----DEAS------------------SKEFSLCLVCPIGNIGGMIGKGDVIINQIR 271
Query: 425 QETGASIHVED-APTDSDERVIRASAFEGL 453
QE GA+I V+ + ++++ ++ SA E L
Sbjct: 272 QEFGATIKVDSTSVVEANDCLVTISAKERL 301
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 391 MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED-APTDSDERVIRASA 449
M + FS++++C IGGVI KGG + Q+++E+GA I V+ + ++D+ ++ A
Sbjct: 36 MRHIQRIFSLRLVCPIRNIGGVIRKGGVFINQIRRESGAIIKVDSTSAAEADDCLVTILA 95
Query: 450 FEGLWNPRSQTIDAILQLQNKTSEFSE----KGTITTRLLVPSSKVGCILGQGGHVINEM 505
E L PR + L + GT T RLLV +++GC++G+GG +I +
Sbjct: 96 KERLHFPRGPQTSHCIFLYRMCMRLWDWNCPSGTFTVRLLVSFNQIGCVIGKGGQIIQSI 155
Query: 506 RRRTQADIRVVGARVKLQDPH 526
R + A IR+ L+D H
Sbjct: 156 RSESGAQIRI------LKDDH 170
>gi|147863214|emb|CAN78372.1| hypothetical protein VITISV_006585 [Vitis vinifera]
Length = 807
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/181 (38%), Positives = 103/181 (56%), Gaps = 15/181 (8%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTK---- 183
++RILCP+ K GGVIGK G I++ RE+T AKI + D++ G +ERVI+I + K
Sbjct: 56 VLFRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKRE 115
Query: 184 ---IAKTQNKDDDSAAETKKESMEPHCA-------AQDALLKVHDRIIEEDLFGGMASDD 233
I + D + +A S P AQ AL++V +RI++ D
Sbjct: 116 ASAICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKK 175
Query: 234 -DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
D N + RLL P+N VGC+LG+ G +++++R E+GA IRVLP D +P CA DE++
Sbjct: 176 EDLGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVLPKDHIPACASPGDELI 235
Query: 293 Q 293
Q
Sbjct: 236 Q 236
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 114/384 (29%), Positives = 180/384 (46%), Gaps = 84/384 (21%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V+++LC K+G +IGK G+I++ L+ ET A I +AD P S+ERV++I +
Sbjct: 423 EVVFKLLCHFEKVGSLIGKGGSIIRXLQSETGASIKIADAAPDSDERVVVISAR------ 476
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
A T + H AQDA+++VH RI E G A + ARLLV
Sbjct: 477 --------EACTLTNXEQKHSPAQDAVIRVHCRIAEIGFEPGAA---------VVARLLV 519
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
+ +GCLLGK G +I +R TGA+IR+ +++P C DE+VQ+ G + AL+
Sbjct: 520 HSQQIGCLLGKGGIIISEMRRATGASIRIFAKEQVPKCGSQNDELVQVIGSLQSVQDALF 579
Query: 307 EVSTLLHQN--PRK------DKPP--SSFPQA--YGGQNFHSPPAPMADMHPLG------ 348
+++ + + P K + PP SSFP+ + H P +P P+G
Sbjct: 580 CITSRIRETIFPLKPSISNVNGPPYMSSFPEIPPPMFRPRHDPASPGHYSSPVGVPHGID 639
Query: 349 NSSWPA-----RNSSLHGM----PST------PWMG---GYG---DQPS---RM------ 378
S+ P ++S HG+ PS P+ G G+G D+PS RM
Sbjct: 640 RSAVPGHPLDHQSSFSHGVDRIGPSNLDRAPYPYGGDRPGHGPPFDRPSSSPRMWTPQGV 699
Query: 379 ---------GSGSI--NSCPPGQMGEVS--AEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
GSG + S PPG + ++++ + V G+ N+ Q++Q
Sbjct: 700 SGNLRGTDVGSGGLASRSGPPGSGSQAPNITXTTVEVAVPQALLSHVYGENNSNLNQIRQ 759
Query: 426 ETGASIHVEDAPTDSDERVIRASA 449
+GA + ++D T S E V+ S
Sbjct: 760 ISGARVVIQDPRTGSSEGVVVVSG 783
Score = 112 bits (279), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/269 (34%), Positives = 130/269 (48%), Gaps = 36/269 (13%)
Query: 294 ISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWP 353
I+G ++AL VS+ L NPR D S+ + GG H + P S+P
Sbjct: 333 ITGTFPAVRKALLLVSSCLQDNPRADATNSAAAKPTGGM-LH------GNGMPGQLDSFP 385
Query: 354 AR--NSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGG 411
R SSLHG GY P G+ + + E K+LC K+G
Sbjct: 386 QRGYGSSLHG--PDYHSRGYSSMPGPENIGANHRM------VLEEEVVFKLLCHFEKVGS 437
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG--LWNPR---SQTIDAILQ 466
+IGKGG ++ LQ ETGASI + DA DSDERV+ SA E L N S DA+++
Sbjct: 438 LIGKGGSIIRXLQSETGASIKIADAAPDSDERVVVISAREACTLTNXEQKHSPAQDAVIR 497
Query: 467 LQNKTSE--FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQD 524
+ + +E F + RLLV S ++GC+LG+GG +I+EMRR T A IR+ K Q
Sbjct: 498 VHCRIAEIGFEPGAAVVARLLVHSQQIGCLLGKGGIIISEMRRATGASIRIF---AKEQV 554
Query: 525 PHPGSSECIVDIRGSSEHLISAHGTYQSF 553
P GS ++ L+ G+ QS
Sbjct: 555 PKCGS---------QNDELVQVIGSLQSV 574
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 79/162 (48%), Gaps = 45/162 (27%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI-----------RAS 448
+ILC A K GGVIGKGG ++Q +++TGA I ++D+ DERVI AS
Sbjct: 58 FRILCPATKTGGVIGKGGAIIRQFREDTGAKIRIDDSVLGCDERVILIVADAVKSKREAS 117
Query: 449 AFEGLW---------------NPRS--------------QTIDAILQLQNKTSEFSEKG- 478
A G NP + + + IL++ + E +K
Sbjct: 118 AICGAEANDGEESANLSNSSPNPVAVDDDESSPAQQALVRVFERILKVDEEREEKEKKED 177
Query: 479 ----TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ RLL PS++VGC+LG+GG ++ ++R+ + A IRV+
Sbjct: 178 LGNVAVCCRLLAPSNQVGCVLGRGGKIVEKIRQESGAQIRVL 219
>gi|326490983|dbj|BAK05591.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 688
Score = 131 bits (330), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 116/411 (28%), Positives = 188/411 (45%), Gaps = 59/411 (14%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T +RILCP K G + + + ++++ A IT+ PG RVI +
Sbjct: 109 TSFRILCPESK---AYGFPASFINNAQDDSGAIITIHPPFPGDPVRVIETADGTLR---- 161
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIE-------EDLFGGMASDDDNENSTI 240
A+ + P AQ+ALL VH RI+E ED G D + +
Sbjct: 162 -------EADGRPPMFSP---AQEALLMVHRRILETQPDDGDEDGEYGPRGKDARDRGKV 211
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDEMVQISGKPN 299
T RL+VP VGCLLGK G +I+++RSET +IR+LP ++ +P C ++++VQ+ G+ N
Sbjct: 212 TTRLIVPRQHVGCLLGKGGKIIEQMRSETKTHIRILPREQNMPRCLSLSEKVVQVVGEGN 271
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
K+A+ +S L ++ +D+ P G+N AD + G PA
Sbjct: 272 NVKKAVAIISDRLKESLHRDRGP-----FLRGRNSPEHRISQADEYLGGGQQMPAFEEPY 326
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSA------------EFSMKILCSAG 407
DQ GS PPG + + E +ILC
Sbjct: 327 PRF----------DQIRNNGSME----PPGYEFDSNGSKFNEHPEIPYDEIIFRILCPND 372
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
K ++G + LQ E G + + D SDER + ++ EG + +A+L +
Sbjct: 373 KAISLVGSRDGIIDMLQAEVGVDVRLTDLIAGSDERTLIITSREGPDHELFPAQEALLHI 432
Query: 468 QNKTSEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
Q + + ITTRLLVPSS++ C G+ G +++++R+T A+++++
Sbjct: 433 QTFIVDLGPDKDNIITTRLLVPSSEIACFEGRDGS-LSDIQRQTSANVQIL 482
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 91/342 (26%), Positives = 154/342 (45%), Gaps = 60/342 (17%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ ++RILCP+ K ++G I+ L+ E + + D I GS+ER +II S
Sbjct: 362 EIIFRILCPNDKAISLVGSRDGIIDMLQAEVGVDVRLTDLIAGSDERTLIITSR------ 415
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
E + P AQ+ALL + I++ + D DN IT RLLV
Sbjct: 416 ----------EGPDHELFP---AQEALLHIQTFIVD------LGPDKDN---IITTRLLV 453
Query: 247 PNNMVGCLLGKRGDV--IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
P++ + C G+ G + IQR +T AN+++LP + LP CA+ +DE++QI G+ A+ A
Sbjct: 454 PSSEIACFEGRDGSLSDIQR---QTSANVQILPREELPSCALESDELIQIVGEIRAARNA 510
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFH---SP--------------PAPMADMHPL 347
L +V+T L ++ P P GG N H SP P P+ P
Sbjct: 511 LMQVTTKLRSYIYREMPA---PIQIGGINVHGSISPAKGSPRGLYAGNDLPMPIYQQAPQ 567
Query: 348 GNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAG 407
+SW +++S L G +Q S + S + +++++
Sbjct: 568 MATSWHSKDSGLSA-------SGSFEQGSSINDDMRQSNTKRYAVPLVTRSTLEVVIPQS 620
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA 449
+ + + G + Q+ + +GAS+ + + E+V+R S
Sbjct: 621 AVASLSMRAGSKLAQISEMSGASVTLAEERPGVTEKVVRISG 662
>gi|413953982|gb|AFW86631.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 581
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 188/410 (45%), Gaps = 62/410 (15%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+RILCP K G V +R+++ A +TV G RVI +
Sbjct: 91 FRILCPECK---AYGFPPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARR------ 141
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIE--------EDLFGGMASDDDNENSTIT 241
A+ + P AQ+ALL VH RI+E + +G D + T T
Sbjct: 142 -----EADGRPPMFSP---AQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRGKT-T 192
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDEMVQISGKPNV 300
RL+VP VGCLLGK G +I+++R ET +IR+LP D+ P C ++E+VQ+ G N
Sbjct: 193 TRLIVPKMHVGCLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNC 252
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
K+A+ ++ L ++ +D+ P G N P D + LG S PA SL
Sbjct: 253 VKKAVAIITDRLKESLHRDRGP-----FRGRMNSPEPRISQEDDY-LGVSQMPAYEESL- 305
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPG-----QMGEVSA-------EFSMKILCSAGK 408
G DQ S PPG G+V + +ILC K
Sbjct: 306 ---------GRSDQIRNNTSME----PPGYEFDSNDGKVIEHPDILYDDIIFRILCPNDK 352
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQ 468
+ ++ ++ LQ + G + + D SDERV+ ++ EG + +A+L +Q
Sbjct: 353 VDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSREGPDHELFPAQEAVLHIQ 412
Query: 469 NKTSEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ + ITTRLLVPSS++ C G+ G +++++R+T A+++++
Sbjct: 413 THIVDLGPDKDNIITTRLLVPSSEIACFDGREGS-LSDIQRQTSANVQIL 461
Score = 105 bits (261), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 114/218 (52%), Gaps = 36/218 (16%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D ++RILCP+ K+ ++ I++ L+ + + ++D I GS+ERV+II S
Sbjct: 341 DIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSR------ 394
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
E + P AQ+A+L + I++ + D DN IT RLLV
Sbjct: 395 ----------EGPDHELFP---AQEAVLHIQTHIVD------LGPDKDN---IITTRLLV 432
Query: 247 PNNMVGCLLGKRGDV--IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
P++ + C G+ G + IQR +T AN+++LP + LP CA+ +DE++QI G+ + A+ A
Sbjct: 433 PSSEIACFDGREGSLSDIQR---QTSANVQILPKEDLPLCALESDELIQIVGEISAARNA 489
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMA 342
L +V+T L ++ S P G N H +P+A
Sbjct: 490 LIQVTTKLRSFLYREM---SGPIQVGNINVHGAISPVA 524
>gi|413953981|gb|AFW86630.1| hypothetical protein ZEAMMB73_253509 [Zea mays]
Length = 667
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 119/410 (29%), Positives = 188/410 (45%), Gaps = 62/410 (15%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+RILCP K G V +R+++ A +TV G RVI +
Sbjct: 91 FRILCPECK---AYGFPPGFVAKVRDDSGALVTVHPPFAGDYVRVIETVDGARR------ 141
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIE--------EDLFGGMASDDDNENSTIT 241
A+ + P AQ+ALL VH RI+E + +G D + T T
Sbjct: 142 -----EADGRPPMFSP---AQEALLMVHRRILETDADDGDEDGEYGPRGKDSRDRGKT-T 192
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDEMVQISGKPNV 300
RL+VP VGCLLGK G +I+++R ET +IR+LP D+ P C ++E+VQ+ G N
Sbjct: 193 TRLIVPKMHVGCLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQVVGDGNC 252
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
K+A+ ++ L ++ +D+ P G N P D + LG S PA SL
Sbjct: 253 VKKAVAIITDRLKESLHRDRGP-----FRGRMNSPEPRISQEDDY-LGVSQMPAYEESL- 305
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPG-----QMGEVSA-------EFSMKILCSAGK 408
G DQ S PPG G+V + +ILC K
Sbjct: 306 ---------GRSDQIRNNTSME----PPGYEFDSNDGKVIEHPDILYDDIIFRILCPNDK 352
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQ 468
+ ++ ++ LQ + G + + D SDERV+ ++ EG + +A+L +Q
Sbjct: 353 VDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSREGPDHELFPAQEAVLHIQ 412
Query: 469 NKTSEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ + ITTRLLVPSS++ C G+ G +++++R+T A+++++
Sbjct: 413 THIVDLGPDKDNIITTRLLVPSSEIACFDGREGS-LSDIQRQTSANVQIL 461
Score = 110 bits (274), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 157/337 (46%), Gaps = 50/337 (14%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D ++RILCP+ K+ ++ I++ L+ + + ++D I GS+ERV+II S
Sbjct: 341 DIIFRILCPNDKVDNLVATNDGILEMLQADVGVDVRLSDIIAGSDERVVIITSR------ 394
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
E + P AQ+A+L + I++ + D DN IT RLLV
Sbjct: 395 ----------EGPDHELFP---AQEAVLHIQTHIVD------LGPDKDN---IITTRLLV 432
Query: 247 PNNMVGCLLGKRGDV--IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
P++ + C G+ G + IQR +T AN+++LP + LP CA+ +DE++QI G+ + A+ A
Sbjct: 433 PSSEIACFDGREGSLSDIQR---QTSANVQILPKEDLPLCALESDELIQIVGEISAARNA 489
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP----LGNSSWPARNSSLH 360
L +V+T L ++ S P G N H +P+A P LGN P
Sbjct: 490 LIQVTTKLRSFLYREM---SGPIQVGNINVHGAISPVAG-SPGGPNLGN-DMPMSAYHQA 544
Query: 361 GMPSTPWM----GGYGDQPSRMGSGSINSCPPGQMGEVSAEF----SMKILCSAGKIGGV 412
+T W GG GS I+ G + +++++ + +
Sbjct: 545 SQLATSWHSKDSGGSASGSFDQGSNIIDEIRQGATKRFAVPLVTRSTLEVVIPNSAVASL 604
Query: 413 IGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA 449
+ G + Q+ + +GA++ + + D E+V+R S
Sbjct: 605 TMRAGSKLAQISEISGATVTLAEDRPDILEKVVRISG 641
>gi|222618061|gb|EEE54193.1| hypothetical protein OsJ_01028 [Oryza sativa Japonica Group]
Length = 748
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 153/551 (27%), Positives = 253/551 (45%), Gaps = 118/551 (21%)
Query: 83 DASKRNFFKKRPNNQFKRKGVVGIKKGNW---SNSSREQSFGNSQPADTVYRILCPSRKI 139
D + R+ KRP F++ +G W ++S +Q QP ++RILCP+ K
Sbjct: 43 DMASRSTPSKRP---FQKNSSEQNGRGKWQKTKHNSLQQPQLIVQPGVPIFRILCPTSKS 99
Query: 140 GGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYS--SPTKIAKTQNKDDDSAA- 196
G VIGK G I+ +R+ET KI V + +PG +ERVI+I + +++ Q K++D
Sbjct: 100 GNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITAIDKDREVSHVQTKENDGGVA 159
Query: 197 ------------ETKKESMEPHCAAQDA-----------LLKVHDRIIEEDLFGGMASDD 233
TK+E E + D+ L K HD+ E+ G +D
Sbjct: 160 CSVDGNHGMEKDHTKEEKDESNKEMDDSEKGLGKEEKDDLEKDHDK--EDRDESGKDNDK 217
Query: 234 DNENSTIT----------------------ARLLVPN--------NMVGCLLGKRGDV-- 261
++S++ A LLV + N G G+R V
Sbjct: 218 KADDSSVAKDTNSEPEAQLELEKGMPLAVKAILLVFDRIFVNEMENGTGDASGERNHVSL 277
Query: 262 -------------------IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
I+++ +++ IRV D+LP CA+ DE+ QI+G+ + +
Sbjct: 278 RLLVLDSQVGWLLGKNGSVIKQMSTDSCCEIRV-SKDKLPLCALPRDELCQITGELDSVR 336
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG---NSSWPARNSSL 359
+ L V+ LL +P K+ + ++F + P D+ P G N P + ++
Sbjct: 337 KGLNTVAQLLFTHPPKESDVLGAHNSGSSRSFFNQP----DVLPPGMQPNLHLPFQGPNV 392
Query: 360 HGMPSTP--WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
+P+ P M G+G S PP + ++LCS+ K+GG+IGKGG
Sbjct: 393 AHLPNFPEALMHGHG------------SVPP-------EPLTFRLLCSSDKVGGIIGKGG 433
Query: 418 FNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKT--SEFS 475
N+K +Q +TG I V D S++R++ S + S +AIL +Q K + +
Sbjct: 434 NNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGISPAQNAILHVQRKIVPTSNT 493
Query: 476 EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVD 535
++G RL+V ++VGC+LG+GG +I EMR+ + A I +V ++ K+ P + E +V
Sbjct: 494 KEGPAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHI-IVLSKDKIPKGVPENDE-VVQ 551
Query: 536 IRGSSEHLISA 546
I G+SE + A
Sbjct: 552 ISGASEAIQEA 562
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 28/206 (13%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
G+ P +R+LC S K+GG+IGK GN +KS++ +T +I V DT+P SE+R++ I
Sbjct: 407 GSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFI--- 463
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
S + + P AQ+A+L V +I+ + + E I
Sbjct: 464 -------------SGPAHPGDGISP---AQNAILHVQRKIV--------PTSNTKEGPAI 499
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
RL+V N VGCLLGK G +I +R +GA+I VL D++P DE+VQISG
Sbjct: 500 -CRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEA 558
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFP 326
+ AL +++ L + +D+ S+ P
Sbjct: 559 IQEALMQITARLRNHLFRDRMASTVP 584
>gi|293332893|ref|NP_001169297.1| uncharacterized protein LOC100383161 [Zea mays]
gi|224028485|gb|ACN33318.1| unknown [Zea mays]
Length = 664
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 137/515 (26%), Positives = 223/515 (43%), Gaps = 70/515 (13%)
Query: 114 SSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEER 173
SS G A T +RILCP K + V +R+++ A +TV G R
Sbjct: 71 SSATADGGAGSTATTSFRILCPECK---AYSFSPGFVAKVRDDSGALVTVHPPFAGDYVR 127
Query: 174 VIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCA-AQDALLKVHDRIIE--------ED 224
VI + A + + P + AQ+ALL VH RI+E +
Sbjct: 128 VI---------------ETVDGARREADGCPPMFSPAQEALLMVHRRILETDADDGDEDG 172
Query: 225 LFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLP-ADRLPP 283
+G D + T T RL+VP VGCLLGK G +I+++R ET +IR+L P
Sbjct: 173 EYGPRGKDARDRGKT-TTRLIVPKQHVGCLLGKGGKIIEQMRMETKTHIRILSRGQHTPR 231
Query: 284 CAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMAD 343
C +++E+VQ+ G N K+A+ ++ L ++ +D+ P G N P D
Sbjct: 232 CVSSSEEVVQVVGDGNCVKKAVAIITDRLKESLHRDRGP-----FRGRLNSPEPRISQED 286
Query: 344 MHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQM-----GEV---- 394
+ G PA SL G P ++ +I+ PPG + G+V
Sbjct: 287 EYLGGVQQMPAYVESLGG-------------PDQI-RNNISMEPPGYVFDSNGGKVIEHP 332
Query: 395 ---SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
+ +ILC K ++ ++ LQ + G + + D +DSDERV+ ++ E
Sbjct: 333 DILYEDIIFRILCPNDKADSLVATRDGILEMLQTDVGVDVRLSDITSDSDERVLIITSRE 392
Query: 452 GLWNPRSQTIDAILQLQNKTSEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
G + +A+L +Q + ITTRLLVP+S++ C G+ G +++++R+T
Sbjct: 393 GPDHELFPAQEAVLHIQTHIVDLGPDMDNIITTRLLVPASEIACFDGREGS-LSDIQRQT 451
Query: 510 QADIRVVGARVKLQDPHPGSSECIV---DIRGSSEHLISAHGTYQSFMTSGQSMKVQPSS 566
A+++++ R L S E I +I+ + LI +SF+ P
Sbjct: 452 SANVQIL-PREDLPSCALESDELIQIVGEIKAARNALIQVTTKLRSFLYREMP---DPIQ 507
Query: 567 YQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVN 601
NIN + S + YQ + YH+ +
Sbjct: 508 VGNINLHGAISPVAGSPRGPYQGNDIPMGAYHQAS 542
Score = 102 bits (255), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/335 (25%), Positives = 154/335 (45%), Gaps = 46/335 (13%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D ++RILCP+ K ++ I++ L+ + + ++D S+ERV+II S
Sbjct: 338 DIIFRILCPNDKADSLVATRDGILEMLQTDVGVDVRLSDITSDSDERVLIITSR------ 391
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
E + P AQ+A+L + I++ + D DN IT RLLV
Sbjct: 392 ----------EGPDHELFP---AQEAVLHIQTHIVD------LGPDMDN---IITTRLLV 429
Query: 247 PNNMVGCLLGKRGDV--IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
P + + C G+ G + IQR +T AN+++LP + LP CA+ +DE++QI G+ A+ A
Sbjct: 430 PASEIACFDGREGSLSDIQR---QTSANVQILPREDLPSCALESDELIQIVGEIKAARNA 486
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMA---------DMHPLGNSSWPAR 355
L +V+T L ++ P P G N H +P+A + P+G ++
Sbjct: 487 LIQVTTKLRSFLYREMPD---PIQVGNINLHGAISPVAGSPRGPYQGNDIPMGAYHQASQ 543
Query: 356 -NSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
+S H S G +Q S + S + +++I+ + +
Sbjct: 544 LATSWHSKDSGGSASGSFEQGSNINDDIRQSATKRFAVPLVTRSTLEIVIPNSAVASLTM 603
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA 449
+ G + Q+ + +GA++ + + +D ++V+R S
Sbjct: 604 RAGSKLAQISEISGAAVTLAEDRSDILQKVVRISG 638
>gi|4314357|gb|AAD15568.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 649
Score = 127 bits (319), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 144/515 (27%), Positives = 219/515 (42%), Gaps = 72/515 (13%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPT-- 182
P +T R++C + IGG+IG G +V LR ET KI + GS+ V+ I S
Sbjct: 22 PDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVN 81
Query: 183 -KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDR---IIEEDLFGGMASDDDNENS 238
I T + S E + AAQ AL++V +R ++ GG+ +D E
Sbjct: 82 QSILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEE-- 139
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+L N +G +LG G ++ +R +GA IRVLP P C DE++QI+G
Sbjct: 140 -AYCGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPP---PICGTKNDELIQITGDV 195
Query: 299 NVAKRALYEVSTLLHQN-PRKDKPPSSFPQAYGGQNFHSPPAPMADMHP-----LGNSSW 352
K+AL VS+ + N P PP P + G S D H L +SS
Sbjct: 196 LAVKKALVMVSSYIQNNAPLNGYPP---PLSIKGYESLSTDGNSEDPHSEFFPNLRSSSL 252
Query: 353 PARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGV 412
+ P+ GG NS + KI+ ++ GG+
Sbjct: 253 SNATEIVASNRHLPYDGG-------------NST--------ERKVVFKIIFTSVVAGGI 291
Query: 413 IGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTS 472
IGK G ++ LQ ETGASI V S ERV+ SA E L + S +A+ + ++
Sbjct: 292 IGKQGTIIRALQNETGASISVGAPLKVSGERVVTVSARENLESRYSHAQNALALVFARSV 351
Query: 473 EFS-EKG---------TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV-VGARVK 521
E EKG + T+LLVPS G G E T AD+ + VG +V
Sbjct: 352 EIDVEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGNR---EAIIATGADVHISVGNQVL 408
Query: 522 LQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQTMS 581
+E +++I+G H+ Q +T V +N+ P++ + +
Sbjct: 409 ---EWISENEVVIEIKGEYSHV-------QKALT-----HVSSKLRENLLPKKVLGEMRA 453
Query: 582 SHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSS 616
+ Y++ + Y+ +QQ P +I PQ +S
Sbjct: 454 RVSNPYESAGGRSQIYNLQPSQQ-PSNSIKPQDAS 487
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 29/202 (14%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
GNS V++I+ S GG+IGK G I+++L+ ET A I+V + S ERV+ +
Sbjct: 270 GNSTERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTV--- 326
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
+A ES H AQ+AL V R +E D+ G+ N + +
Sbjct: 327 --------------SARENLESRYSH--AQNALALVFARSVEIDVEKGLRPGLHN-GAIV 369
Query: 241 TARLLVPNNMVGCL--LGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+LLVP++ G R +I TGA++ + +++ + +++I G+
Sbjct: 370 KTKLLVPSHFANSFNGNGNREAIIA-----TGADVHISVGNQVLEWISENEVVIEIKGEY 424
Query: 299 NVAKRALYEVSTLLHQN--PRK 318
+ ++AL VS+ L +N P+K
Sbjct: 425 SHVQKALTHVSSKLRENLLPKK 446
>gi|296088778|emb|CBI38228.3| unnamed protein product [Vitis vinifera]
Length = 585
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 171/350 (48%), Gaps = 61/350 (17%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ +++ILC + ++GGVIGK G IVK+L+ E A I+V + +ER+I I
Sbjct: 235 EVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITI--------- 285
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+A+E + P AQ+ ++ V +R IE + G+ D ++ S ++ARL+V
Sbjct: 286 -------TASENPESRYSP---AQNGVILVFNRSIEAGIEKGL--DSGSKGSPVSARLVV 333
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+N VGCL+GK G +I +R +GA IR++ +D++P CA D++VQISG+ + LY
Sbjct: 334 PSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLY 393
Query: 307 EVSTLLHQNPRKDKPPSSFP-QAYGGQNFHSPPAPMADMHPLGNSSWPAR---NSSLHGM 362
++ L N FP + G S A M ++ P G PA +SS+
Sbjct: 394 HITGRLRDN--------LFPSKTLNGAGIRSSSA-MNEISPYGRVRDPASFGLHSSVGVS 444
Query: 363 PS-------TPWMGGYG-----DQPS--RMG-SGSINSCPP-----------GQMGEVSA 396
PS T M G D P+ R+ S ++ P G +
Sbjct: 445 PSFSRHTTLTQSMDHLGLSHSLDHPTSPRLWPSQTVTGVNPRNIKGGIELGSGSKSAIIT 504
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERVI 445
+++I+ IG V G+ G N+ +L++ +GA + + E P SD VI
Sbjct: 505 NTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVI 554
Score = 110 bits (275), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 121/244 (49%), Gaps = 33/244 (13%)
Query: 291 MVQISGKPNVAKRALYEVSTLLHQNPRKDK-------PPSSFPQAYGGQNFHSPPAPMAD 343
M+ I G K+AL VS L P DK P PQ S P P D
Sbjct: 139 MIIIEGDVLAVKKALVAVSRRLQDCPNVDKTKLIGGRPLEVVPQ-------QSLPDPRVD 191
Query: 344 MHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKIL 403
+ + R S L +PS G +P + + I++ P + E KIL
Sbjct: 192 L-------FQQRGSVLPPIPSNTISYASGSRPLSINTERISTLDPKTSQQ---EVIFKIL 241
Query: 404 CSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDA 463
CS ++GGVIGKGG VK LQ E GASI V + DER+I +A E + S +
Sbjct: 242 CSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNG 301
Query: 464 ILQLQNKTSEFS-EKGT--------ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
++ + N++ E EKG ++ RL+VPS++VGC++G+GG +I+EMR+ + A IR
Sbjct: 302 VILVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIR 361
Query: 515 VVGA 518
++G+
Sbjct: 362 IIGS 365
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T +++P + +G + G+ G+ + +R+ + GA+V L +P PG+S+ IV I G+
Sbjct: 507 TVEIVIPENVIGSVYGENGNNLARLRK-------ISGAKVTLHEPRPGTSDRIVIISGTP 559
Query: 541 EHLISAHGTYQSFMTSG 557
+ +A Q+F+ +G
Sbjct: 560 DETQAAQSLLQAFIHTG 576
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+T I+ P IG V G+ GN + LR+ + AK+T+ + PG+ +R++II +P +
Sbjct: 505 NTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQA 564
Query: 187 TQN 189
Q+
Sbjct: 565 AQS 567
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 224 DLFGGMASDDDNENSTIT---ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
++ GG+ ++++ IT +++P N++G + G+ G+ + RLR +GA + +
Sbjct: 487 NIKGGIELGSGSKSAIITNTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTL----- 541
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPR 317
P +D +V ISG P+ + A + +H P+
Sbjct: 542 HEPRPGTSDRIVIISGTPDETQAAQSLLQAFIHTGPK 578
>gi|147789223|emb|CAN69138.1| hypothetical protein VITISV_022038 [Vitis vinifera]
Length = 569
Score = 126 bits (317), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 106/350 (30%), Positives = 171/350 (48%), Gaps = 61/350 (17%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ +++ILC + ++GGVIGK G IVK+L+ E A I+V + +ER+I I
Sbjct: 219 EVIFKILCSNDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITI--------- 269
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+A+E + P AQ+ ++ V +R IE + G+ D ++ S ++ARL+V
Sbjct: 270 -------TASENPESRYSP---AQNGVILVFNRSIEAGIEKGL--DSGSKGSPVSARLVV 317
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+N VGCL+GK G +I +R +GA IR++ +D++P CA D++VQISG+ + LY
Sbjct: 318 PSNQVGCLMGKGGTIISEMRKASGAGIRIIGSDQVPKCASENDQVVQISGEFVNVQDGLY 377
Query: 307 EVSTLLHQNPRKDKPPSSFP-QAYGGQNFHSPPAPMADMHPLGNSSWPAR---NSSLHGM 362
++ L N FP + G S A M ++ P G PA +SS+
Sbjct: 378 HITGRLRDN--------LFPSKTLNGAGIRSSSA-MNEISPYGRVRDPASFGLHSSVGVS 428
Query: 363 PS-------TPWMGGYG-----DQPS--RMG-SGSINSCPP-----------GQMGEVSA 396
PS T M G D P+ R+ S ++ P G +
Sbjct: 429 PSFSRHTTLTQSMDHLGLSHSLDHPTSPRLWPSQTVTGVNPRNIKGGIELGSGSKSAIIT 488
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERVI 445
+++I+ IG V G+ G N+ +L++ +GA + + E P SD VI
Sbjct: 489 NTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVI 538
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 123/242 (50%), Gaps = 29/242 (11%)
Query: 291 MVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNF-----HSPPAPMADMH 345
++QI G K+AL VS L P DK + GG+ S P P D+
Sbjct: 123 VLQIEGDVLAVKKALVAVSRRLQDCPNVDKT-----KLIGGRPLEVVPQQSLPDPRVDL- 176
Query: 346 PLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCS 405
+ R S L +PS G +P + + I++ P + E KILCS
Sbjct: 177 ------FQQRGSVLPPIPSNTISYASGSRPLSINTERISTLDPKTSQQ---EVIFKILCS 227
Query: 406 AGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAIL 465
++GGVIGKGG VK LQ E GASI V + DER+I +A E + S + ++
Sbjct: 228 NDRVGGVIGKGGTIVKALQNEAGASISVGAPVAECDERLITITASENPESRYSPAQNGVI 287
Query: 466 QLQNKTSEFS-EKGT--------ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ N++ E EKG ++ RL+VPS++VGC++G+GG +I+EMR+ + A IR++
Sbjct: 288 LVFNRSIEAGIEKGLDSGSKGSPVSARLVVPSNQVGCLMGKGGTIISEMRKASGAGIRII 347
Query: 517 GA 518
G+
Sbjct: 348 GS 349
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 44/77 (57%), Gaps = 7/77 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T +++P + +G + G+ G+ + +R+ + GA+V L +P PG+S+ IV I G+
Sbjct: 491 TVEIVIPENVIGSVYGENGNNLARLRK-------ISGAKVTLHEPRPGTSDRIVIISGTP 543
Query: 541 EHLISAHGTYQSFMTSG 557
+ +A Q+F+ +G
Sbjct: 544 DETQAAQSLLQAFIHTG 560
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 37/63 (58%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+T I+ P IG V G+ GN + LR+ + AK+T+ + PG+ +R++II +P +
Sbjct: 489 NTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTLHEPRPGTSDRIVIISGTPDETQA 548
Query: 187 TQN 189
Q+
Sbjct: 549 AQS 551
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 224 DLFGGMASDDDNENSTIT---ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
++ GG+ ++++ IT +++P N++G + G+ G+ + RLR +GA + +
Sbjct: 471 NIKGGIELGSGSKSAIITNTTVEIVIPENVIGSVYGENGNNLARLRKISGAKVTL----- 525
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPR 317
P +D +V ISG P+ + A + +H P+
Sbjct: 526 HEPRPGTSDRIVIISGTPDETQAAQSLLQAFIHTGPK 562
>gi|297740744|emb|CBI30926.3| unnamed protein product [Vitis vinifera]
Length = 435
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 130/236 (55%), Gaps = 7/236 (2%)
Query: 286 MNTDEMVQISGKPNVAKRALYEVSTLLHQ-NPRKDKP-PSSFPQAYGGQNFHS--PPAPM 341
M D V I+G K+AL+ +S ++++ PR++ P ++ P+A S P P
Sbjct: 1 MEFDNFVLIAGDSEAVKKALFAISAIMYKFTPREEIPLDTTVPEAPPSIIIPSDVPIYPA 60
Query: 342 ADMHPLGNSSWPARNSS-LHGMPSTPWMGGYGDQPSRMGSGSIN-SCPPGQMGEVSAEFS 399
+P +S AR+ + P + GY D S S N G S E
Sbjct: 61 GGFYPSADSIVSARSVPPVLAATHVPELQGYSDMGSTWPVYSSNLPVVSGYGASRSEELI 120
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++LC KIG VIG+GG ++K +++ +GA + V+D D DE +I ++ E + + +S
Sbjct: 121 IRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTSTESVDDLKSM 180
Query: 460 TIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
++A+L LQ K ++ + T+ RLLVPS +GCI+G+ G +INE+R+RT+AD+R+
Sbjct: 181 AVEAVLLLQAKIND-EDDDTVAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRI 235
Score = 118 bits (296), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 92/333 (27%), Positives = 162/333 (48%), Gaps = 40/333 (12%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYS 179
+G S+ + + R+LCP KIG VIG+ G+ +KS+RE + A + V DT +E +I + S
Sbjct: 111 YGASRSEELIIRVLCPFDKIGRVIGRGGSSIKSVREASGAHVEVDDTKADRDECLITVTS 170
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
T++ DD +SM A +A+L + +I +ED + T
Sbjct: 171 -------TESVDD-------LKSM-----AVEAVLLLQAKINDED------------DDT 199
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ RLLVP+ ++GC++GK G +I +R T A++R+ ++R P CA DE++++ G+
Sbjct: 200 VAIRLLVPSKIIGCIIGKSGSIINEIRKRTRADVRISKSER-PKCADANDELIEVVGEVG 258
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQA-----YGGQNFHSPPAPMADMHPLGNSSWPA 354
+ AL ++ L + KD+ A Y G S + + P+ S+
Sbjct: 259 SVRDALVQIVLRLRDDALKDRDTGHNTSAGTDSLYSGGAGLSVSSVLPSAPPVAPLSYDQ 318
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGS---GSINSCPPGQMGEVSAEFSMKILCSAGKIGG 411
R + G+ YG +G GS++S G + + ++ A +G
Sbjct: 319 RAETGSGLGLLSSSSLYGYGSLSVGENAYGSMSSYSSKLYGGLPTPSTFDMVIPANAVGK 378
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 444
V+GKGG N+ +++ +GA I + D+ + +RV
Sbjct: 379 VMGKGGANIANIRKISGAVIEISDSKSSRGDRV 411
>gi|388500506|gb|AFK38319.1| unknown [Lotus japonicus]
Length = 437
Score = 125 bits (315), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/339 (28%), Positives = 164/339 (48%), Gaps = 62/339 (18%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPT 182
SQ + + R+LCPS KIG VIG+ G+ +KS+R+ + +I V D+ +E +III ++
Sbjct: 115 SQSEELIIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTT-- 172
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
+S ++ K ++E A+L + +I +ED ++ ++
Sbjct: 173 ----------ESPSDLKSMAVE-------AVLLIQGKISDED------------DTEVSI 203
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
+LLVP+ ++GC++GK G +I +R T A+IR+ D+ P CA DE+V++ G + +
Sbjct: 204 QLLVPSKVIGCIIGKSGSIINEIRKRTRADIRISKGDK-PKCADVNDELVEVGGAIDCVR 262
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAP--MADMHPLGNS-----SWPAR 355
AL ++ L + +++ P GG++ +S A + M P +S + R
Sbjct: 263 DALIQIILRLRDDVLRERDTGHNP-TIGGESLYSGGAAYSLPPMLPSVSSVAAPMVYDQR 321
Query: 356 NSSLHGMPSTP-------------WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKI 402
S GM W GY GSI+S P G + ++ I
Sbjct: 322 AESATGMGMLSSSSLYGYGSLSQMWESGY---------GSISSYPTKLYGSLPPPSTLDI 372
Query: 403 LCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD 441
L A +G V+GKGG N+ +++ +GA+I + DA D
Sbjct: 373 LIPANAVGKVLGKGGANIANIRKISGATIEISDARARGD 411
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/237 (31%), Positives = 131/237 (55%), Gaps = 8/237 (3%)
Query: 286 MNTDEMVQISGKPNVAKRALYEVSTLLHQ-NPRKD-KPPSSFPQAYGGQNFHS--PPAPM 341
M D V I+G+ KRAL+ VS+++++ P++D ++ P+A S P P
Sbjct: 1 MEFDNFVVITGESESVKRALFAVSSIMYKFGPKEDISLDTTVPEAPPSIIIPSEVPYYPH 60
Query: 342 ADMHPLGNSSWPARNS-SLHGMPSTPWMGGYGDQPSR--MGSGSINSCPPGQMGEVSAEF 398
++P + P R + G + + GY D + + S ++ G S E
Sbjct: 61 GGLYPSSDPIIPPRAVPQIMGGTNIQDVQGYADIGNTWPLYSSALPVVSGGVDASQSEEL 120
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRS 458
+++LC + KIG VIG+GG +K ++Q +G I V+D+ + DE +I + E + +S
Sbjct: 121 IIRMLCPSNKIGRVIGRGGSTIKSMRQASGTRIEVDDSKANHDECLIIITTTESPSDLKS 180
Query: 459 QTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
++A+L +Q K S+ + ++ +LLVPS +GCI+G+ G +INE+R+RT+ADIR+
Sbjct: 181 MAVEAVLLIQGKISD-EDDTEVSIQLLVPSKVIGCIIGKSGSIINEIRKRTRADIRI 236
>gi|356528011|ref|XP_003532599.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 433
Score = 125 bits (314), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 98/326 (30%), Positives = 164/326 (50%), Gaps = 35/326 (10%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ +RI+C + ++G VIGK G+IV++L+ E+ A I+V ++ E+R++ I
Sbjct: 112 EVTFRIICSNDRVGAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTI--------- 162
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+A+E + + P AQ A++ V + +E + G+ E +TARL+V
Sbjct: 163 -------TASENPESTYSP---AQKAVVLVFSKSVEAGVEKGLELGSKKE-PYVTARLVV 211
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+N VGCLLGK G ++ +R TGANIRV+ D++P C + D++VQISG + + A++
Sbjct: 212 PSNQVGCLLGKGGAIVSEMRKATGANIRVIGNDQVPMCVSDNDQLVQISGVFSNVQAAIH 271
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA----PMADMHPLGNSSWPARNS--SLH 360
+ L +D S + G ++ S A +A H L S P + ++
Sbjct: 272 NATGRL-----RDHLFVSTQNSGGARSLSSVLAGGQPTLAISHSLNRHSLPGLQAPQTVA 326
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNV 420
G+ S G SR G + S G + +++I+ IG V G+ G N+
Sbjct: 327 GINSRGTNGVSRGLISRKGGLELIS---GSKTAIVTNTTVQIVVPDDVIGSVYGENGSNL 383
Query: 421 KQLQQETGASIHV-EDAPTDSDERVI 445
+L+Q +GA + V E P SD +I
Sbjct: 384 ARLRQISGAKVIVHEPRPGTSDRTII 409
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 120/238 (50%), Gaps = 13/238 (5%)
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
E+ QI G+ K+AL VS L P D+ + + Y + P+ + L
Sbjct: 8 ELYQIEGQLTSVKKALIAVSHRLQDCPPPDRTKMTGSRHYEVVQSETFSVPLESLTNLHI 67
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
R+S+L + + G +++ P + E + +I+CS ++
Sbjct: 68 DHHLQRSSTLSTLSNRSNGNASGAHKLSAEVNRVSALDPKAYQQ---EVTFRIICSNDRV 124
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G VIGKGG V+ LQ E+GA I V + + ++R++ +A E + S A++ + +
Sbjct: 125 GAVIGKGGSIVRALQNESGAIISVGPSLVECEDRLVTITASENPESTYSPAQKAVVLVFS 184
Query: 470 KTSEFS-EKGT---------ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
K+ E EKG +T RL+VPS++VGC+LG+GG +++EMR+ T A+IRV+G
Sbjct: 185 KSVEAGVEKGLELGSKKEPYVTARLVVPSNQVGCLLGKGGAIVSEMRKATGANIRVIG 242
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 3/92 (3%)
Query: 101 KGVVGIKKGNWSNSSREQSFGNSQPA---DTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
+G G+ +G S + S+ A +T +I+ P IG V G+ G+ + LR+ +
Sbjct: 331 RGTNGVSRGLISRKGGLELISGSKTAIVTNTTVQIVVPDDVIGSVYGENGSNLARLRQIS 390
Query: 158 QAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
AK+ V + PG+ +R III +P + Q+
Sbjct: 391 GAKVIVHEPRPGTSDRTIIISGTPDETRAAQS 422
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 43/79 (54%), Gaps = 7/79 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T +++VP +G + G+ G + +R+ + GA+V + +P PG+S+ + I G+
Sbjct: 362 TVQIVVPDDVIGSVYGENGSNLARLRQ-------ISGAKVIVHEPRPGTSDRTIIISGTP 414
Query: 541 EHLISAHGTYQSFMTSGQS 559
+ +A Q+F+ +G S
Sbjct: 415 DETRAAQSLLQAFILAGSS 433
>gi|326504604|dbj|BAK06593.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 531
Score = 125 bits (313), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 92/265 (34%), Positives = 127/265 (47%), Gaps = 35/265 (13%)
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKDKP--PSSFPQAYGGQNFHSPPAPMADMHPLGNS 350
+ISG + A++AL VST L NPR D PS P G PP D H +
Sbjct: 69 EISGSFSAARKALLLVSTCLQDNPRPDTSNFPSGRPFGPPGSGVGCPPG--VDPHSQRSY 126
Query: 351 SWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIG 410
P H + S N PG V E +++C +G
Sbjct: 127 LPPPHVPDYHAR-----------------NFSSNGAAPGPRFFVEQEIVFRMICLNDMVG 169
Query: 411 GVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNK 470
GVIGKGG ++ LQ ETGAS+ V D DSDER+I SA E RS + DA+L++ +K
Sbjct: 170 GVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVISARENSEMMRSPSQDALLRVYSK 229
Query: 471 TSEFS--EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPG 528
SE S + ++ RLLVP+ +GC+LG+GG +I EMR+ T A IR+ G
Sbjct: 230 ISEASMDKSSSVPARLLVPAQHIGCLLGKGGSIIAEMRKLTGASIRIFG----------- 278
Query: 529 SSECIVDIRGSSEHLISAHGTYQSF 553
+E I ++ L+ G++QS
Sbjct: 279 -NEQIPRCAQRNDELVQVTGSFQSI 302
Score = 118 bits (295), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 64/183 (34%), Positives = 105/183 (57%), Gaps = 28/183 (15%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V+R++C + +GGVIGK G+ +++L+ ET A + V D + S+ER+I+I
Sbjct: 156 EIVFRMICLNDMVGGVIGKGGSTIRALQSETGASVKVIDPVADSDERIIVI--------- 206
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
SA E + P +QDALL+V+ +I E + +++S++ ARLLV
Sbjct: 207 -------SARENSEMMRSP---SQDALLRVYSKISEASM---------DKSSSVPARLLV 247
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P +GCLLGK G +I +R TGA+IR+ +++P CA DE+VQ++G + AL
Sbjct: 248 PAQHIGCLLGKGGSIIAEMRKLTGASIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALL 307
Query: 307 EVS 309
++
Sbjct: 308 HIT 310
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 48/121 (39%), Gaps = 20/121 (16%)
Query: 454 WNPRSQTIDAILQLQNKT-------------SEFSEKGTITTRLLVPSSKVGCILGQGGH 500
W P + DA + + ++ + T TT +++P +G + G G
Sbjct: 418 WAPEAPATDAPRSMPDTVPAVDFRKGPVSSENQVATPATTTTEVVIPCKYIGFVCGTNGS 477
Query: 501 VINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSM 560
++E+++ + GA + + DP PG + V I G E A +F+ G
Sbjct: 478 DLDEIKK-------ISGAAITVHDPKPGDTNSTVIICGDPEQTKKAQSLIHAFIFCGLYQ 530
Query: 561 K 561
K
Sbjct: 531 K 531
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 5/87 (5%)
Query: 103 VVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKIT 162
V +KG S+ ++ + PA T ++ P + IG V G G+ + +++ + A IT
Sbjct: 437 AVDFRKGPVSSENQVAT-----PATTTTEVVIPCKYIGFVCGTNGSDLDEIKKISGAAIT 491
Query: 163 VADTIPGSEERVIIIYSSPTKIAKTQN 189
V D PG +II P + K Q+
Sbjct: 492 VHDPKPGDTNSTVIICGDPEQTKKAQS 518
>gi|242055819|ref|XP_002457055.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
gi|241929030|gb|EES02175.1| hypothetical protein SORBIDRAFT_03g000560 [Sorghum bicolor]
Length = 716
Score = 125 bits (313), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 124/399 (31%), Positives = 182/399 (45%), Gaps = 93/399 (23%)
Query: 188 QNKDD---DSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA-- 242
+ KDD AE++ E + P +A A+ V DRI A+ D+NE +A
Sbjct: 192 EEKDDPFVAKVAESEPERVIP--SALKAISLVFDRI--------FAAGDNNETGNASAAS 241
Query: 243 -----RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
RLLV + G LLGK G VI+++ ++ G IRVL D LP CA+ D++ QI+G+
Sbjct: 242 TPVSLRLLVLYSQAGWLLGKGGSVIKQMSADNGCEIRVL-RDNLPSCALLNDKLCQITGE 300
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSS------------FPQAYG-----GQNFHSP--- 337
+ ++ L VS LL +P K+ S F Q+ G NFH P
Sbjct: 301 IDSVRKGLNAVSELLLAHPPKETDAVSGVHSSGSSSRSLFNQSDGLPSGMQSNFHIPLQG 360
Query: 338 ------PAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQM 391
P + D+ P +HG S P
Sbjct: 361 PSQANGPFDIIDLQP-----------PIHGHASVPI------------------------ 385
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
S ++LC K+G +IGKGG VK +Q++TG I V D S++R+I S
Sbjct: 386 ----ESLSFRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISISGPA 441
Query: 452 GLWNPRSQTIDAILQLQNK----TSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ S +AIL +Q K TS+ E G RL+V +++VGC+LG+GG +I EMR+
Sbjct: 442 HPSDGISPAQNAILHVQRKIMLPTSDKKE-GPAICRLIVSANQVGCVLGKGGSIIAEMRK 500
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
+ A I +V ++ K+ P E +V I GS E + A
Sbjct: 501 LSGAFI-IVLSKDKIPRGVPEHDE-VVQISGSCEAIQEA 537
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/198 (35%), Positives = 106/198 (53%), Gaps = 28/198 (14%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+LCP K+G +IGK GNIVK+++++T +I V DT+P SE+R+I I
Sbjct: 390 FRMLCPQDKVGSIIGKGGNIVKTIQKDTGCEIKVLDTVPKSEDRIISI------------ 437
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
S + + P AQ+A+L V +I+ + + D E I RL+V N
Sbjct: 438 ----SGPAHPSDGISP---AQNAILHVQRKIM-------LPTSDKKEGPAI-CRLIVSAN 482
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VGC+LGK G +I +R +GA I VL D++P DE+VQISG + AL +++
Sbjct: 483 QVGCVLGKGGSIIAEMRKLSGAFIIVLSKDKIPRGVPEHDEVVQISGSCEAIQEALMQIT 542
Query: 310 TLLHQNP-RKDKPPSSFP 326
L + R D+ P+ P
Sbjct: 543 ARLRNHLFRVDRMPAMGP 560
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
Query: 108 KGNW---SNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA 164
+G W +SS +S +P +RILCP+ K G VIGK G I+ +REET+ +I V
Sbjct: 22 RGKWQKTKHSSPHKSQFKIEPGVPFFRILCPASKSGNVIGKGGAIIAKIREETRMRIRVD 81
Query: 165 DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKES 202
PG +ERVI I + +KD+++++E E+
Sbjct: 82 RAAPGCDERVIFITAV--------DKDEEASSERGVEN 111
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
+ILC A K G VIGKGG + ++++ET I V+ A DERVI +A +
Sbjct: 47 FRILCPASKSGNVIGKGGAIIAKIREETRMRIRVDRAAPGCDERVIFITAVD 98
>gi|30681758|ref|NP_850026.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|330252232|gb|AEC07326.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 632
Score = 124 bits (312), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 130/442 (29%), Positives = 190/442 (42%), Gaps = 59/442 (13%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPT-- 182
P +T R++C + IGG+IG G +V LR ET KI + GS+ V+ I S
Sbjct: 22 PDETAIRVVCHASVIGGIIGSNGYVVSKLRRETGTKIHCESPVNGSDHWVVFIVGSTAVN 81
Query: 183 -KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDR---IIEEDLFGGMASDDDNENS 238
I T + S E + AAQ AL++V +R ++ GG+ +D E
Sbjct: 82 QSILLTDRVGEFSGGEHEDWVTCEVSAAQTALIRVLERSWVVLAAKDGGGVVDGEDEE-- 139
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+L N +G +LG G ++ +R +GA IRVLP P C DE++QI+G
Sbjct: 140 -AYCGILADRNQIGAVLGLGGKNVEWMRRNSGAMIRVLPP---PICGTKNDELIQITGDV 195
Query: 299 NVAKRALYEVSTLLHQN-PRKDKPPSSFPQAYGGQNFHSPPAPMADMHP-----LGNSSW 352
K+AL VS+ + N P PP P + G S D H L +SS
Sbjct: 196 LAVKKALVMVSSYIQNNAPLNGYPP---PLSIKGYESLSTDGNSEDPHSEFFPNLRSSSL 252
Query: 353 PARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGV 412
+ P+ GG NS + KI+ ++ GG+
Sbjct: 253 SNATEIVASNRHLPYDGG-------------NST--------ERKVVFKIIFTSVVAGGI 291
Query: 413 IGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTS 472
IGK G ++ LQ ETGASI V S ERV+ SA E L + S +A+ + ++
Sbjct: 292 IGKQGTIIRALQNETGASISVGAPLKVSGERVVTVSARENLESRYSHAQNALALVFARSV 351
Query: 473 EFS-EKG---------TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV-VGARVK 521
E EKG + T+LLVPS G G E T AD+ + VG +V
Sbjct: 352 EIDVEKGLRPGLHNGAIVKTKLLVPSHFANSFNGNGNR---EAIIATGADVHISVGNQVL 408
Query: 522 LQDPHPGSSECIVDIRGSSEHL 543
+E +++I+G H+
Sbjct: 409 ---EWISENEVVIEIKGEYSHV 427
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 97/202 (48%), Gaps = 29/202 (14%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
GNS V++I+ S GG+IGK G I+++L+ ET A I+V + S ERV+ +
Sbjct: 270 GNSTERKVVFKIIFTSVVAGGIIGKQGTIIRALQNETGASISVGAPLKVSGERVVTV--- 326
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
+A ES H AQ+AL V R +E D+ G+ N + +
Sbjct: 327 --------------SARENLESRYSH--AQNALALVFARSVEIDVEKGLRPGLHN-GAIV 369
Query: 241 TARLLVPNNMVGCL--LGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+LLVP++ G R +I TGA++ + +++ + +++I G+
Sbjct: 370 KTKLLVPSHFANSFNGNGNREAIIA-----TGADVHISVGNQVLEWISENEVVIEIKGEY 424
Query: 299 NVAKRALYEVSTLLHQN--PRK 318
+ ++AL VS+ L +N P+K
Sbjct: 425 SHVQKALTHVSSKLRENLLPKK 446
>gi|218200638|gb|EEC83065.1| hypothetical protein OsI_28176 [Oryza sativa Indica Group]
gi|222640076|gb|EEE68208.1| hypothetical protein OsJ_26373 [Oryza sativa Japonica Group]
Length = 431
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 141/276 (51%), Gaps = 41/276 (14%)
Query: 286 MNTDEMVQISGKPNVAKRALYEVSTLLHQNPRK----------DKPPS----SFPQAYGG 331
M+ D VQI+G ++AL+ VST++++ P K D PPS S Y
Sbjct: 1 MSFDNFVQITGDARAVRKALFAVSTIIYKCPSKETIPLETSVSDLPPSIIVPSELPVYPS 60
Query: 332 QNFHSPP-APMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRM--GSGSINSCPP 388
NF+SP A ++ HP S L P P + D SR+ + P
Sbjct: 61 SNFYSPSDAAISSGHP--------SLSILGSTPHVPELTVSADAHSRLPIYQSVLPVIPA 112
Query: 389 GQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS 448
+ S E +++LC AGKIG VIGKGG +K +++E+GA I V+D+ D +E +I +
Sbjct: 113 YNTPKCSGELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITIT 172
Query: 449 AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+ E + +S ++A+L LQ+K ++ +E I GC++G+GG ++N+MR +
Sbjct: 173 SNEATDDAKSAAVEAVLLLQSKINDDNEGKVI-----------GCLIGKGGSIVNDMRSK 221
Query: 509 TQADIRVVGARVKLQDPHPG-SSECIVDIRGSSEHL 543
T+A I + K + P SS+ +V++ G E+L
Sbjct: 222 TKAAIYI----SKGEKPRKASSSDELVEVFGEVENL 253
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/342 (26%), Positives = 143/342 (41%), Gaps = 71/342 (20%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V R+LCP+ KIG VIGK G +KS+R+E+ A+I V D+ EE +I I
Sbjct: 121 ELVLRVLCPAGKIGLVIGKGGVTIKSIRKESGARIDVDDSKNDREESIITI--------- 171
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
T N+ D A AA +A+L + +I +DDNE
Sbjct: 172 TSNEATDDA----------KSAAVEAVLLLQSKI-----------NDDNE---------- 200
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
++GCL+GK G ++ +RS+T A I + ++ P A ++DE+V++ G+ + AL
Sbjct: 201 -GKVIGCLIGKGGSIVNDMRSKTKAAIYISKGEK-PRKASSSDELVEVFGEVENLRDALV 258
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPA------------ 354
++ L + +D + G +A PL SS+P
Sbjct: 259 QIVLRLRDDVLRDSVDRQNSEKDGKLT-------VATTDPLYASSYPLPALLPYRQQITP 311
Query: 355 -----RNSSLHGMPSTPWMGGYGD---QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
R G+ P YG Q G +++S G M I S
Sbjct: 312 LGYDHRGDIERGLEVYPHSSLYGYSSLQAIDDGYSAVSSYASKGYGGRPPHMEMTIPASG 371
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS 448
+ V+GK G N+ + + +GA I + ++ + V R S
Sbjct: 372 --LSKVMGKHGTNLDNIIKISGAHIEIIESKSSRHGHVARIS 411
>gi|384248562|gb|EIE22046.1| hypothetical protein COCSUDRAFT_43031 [Coccomyxa subellipsoidea
C-169]
Length = 243
Score = 123 bits (309), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 106/181 (58%), Gaps = 27/181 (14%)
Query: 115 SREQSFGNSQ--PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEE 172
++ Q+ G ++ +TVYR+L S+K+G VIGKAG IVK++R+ET A+I V + +P +E
Sbjct: 88 AKRQAIGAAEGPQTETVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVVEGVPNCDE 147
Query: 173 RVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASD 232
RVI+I + D+A T AAQ+AL KVH R+ E +
Sbjct: 148 RVIVISAR-----------SDAARHTD--------AAQEALFKVHARVHEHE------EG 182
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
+ T R+LV + GCL+GK G +I+ +R +GA+I++LPA+ LPPC ++ D +V
Sbjct: 183 PHPPPANATTRMLVCHTQAGCLIGKAGAIIKEIREASGAHIKILPAEDLPPCGLSNDRVV 242
Query: 293 Q 293
Q
Sbjct: 243 Q 243
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 67/127 (52%), Gaps = 5/127 (3%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
E ++L + K+G VIGK G VK ++ ETGA I V + + DERVI SA
Sbjct: 102 ETVYRLLVQSKKVGSVIGKAGTIVKAIRDETGARIRVVEGVPNCDERVIVISARSDAARH 161
Query: 457 RSQTIDAILQLQNKTSEFSE-----KGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+A+ ++ + E E TTR+LV ++ GC++G+ G +I E+R + A
Sbjct: 162 TDAAQEALFKVHARVHEHEEGPHPPPANATTRMLVCHTQAGCLIGKAGAIIKEIREASGA 221
Query: 512 DIRVVGA 518
I+++ A
Sbjct: 222 HIKILPA 228
>gi|218187831|gb|EEC70258.1| hypothetical protein OsI_01061 [Oryza sativa Indica Group]
Length = 722
Score = 123 bits (308), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 151/551 (27%), Positives = 240/551 (43%), Gaps = 144/551 (26%)
Query: 83 DASKRNFFKKRPNNQFKRKGVVGIKKGNWSNS---SREQSFGNSQPADTVYRILCPSRKI 139
D + R+ KRP F++ +G W + S +Q QP ++RILCP+ K
Sbjct: 43 DMASRSTPSKRP---FQKNSSEQNGRGKWQKTKHNSLQQPQLIVQPGVPIFRILCPTSKS 99
Query: 140 GGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYS--SPTKIAKTQNKDDDSAA- 196
G VIGK G I+ +R+ET KI V + +PG +ERVI+I + +++ Q K++D
Sbjct: 100 GNVIGKGGGIIAKIRQETGVKIRVDEVVPGCDERVIVITAIDKDREVSHVQTKENDGGVA 159
Query: 197 ------------ETKKESMEPHCAAQDA-----------LLKVHDRIIEEDLFGGMASDD 233
TK+E E + D+ L K HD+ E+ G +D
Sbjct: 160 CSVDGNHGMEKDHTKEEKDESNKEMDDSEKGLGKEEKDDLEKDHDK--EDRDESGKDNDK 217
Query: 234 DNENSTIT----------------------ARLLVPN--------NMVGCLLGKRGDV-- 261
++S++ A LLV + N G G+R V
Sbjct: 218 KADDSSVAKDTNSEPEAQLELEKGMPLAVKAILLVFDRIFVNEMENGTGDASGERNHVSL 277
Query: 262 -------------------IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
I+++ +++ IRV D+LP CA+ DE+ QI+G+ + +
Sbjct: 278 RLLVLDSQVGWLLGKNGSVIKQMSTDSCCEIRV-SKDKLPLCALPRDELCQITGELDSVR 336
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQN-----FHSPPAPMADMHPLGNSSWPARNS 357
+ L V+ LL +P K+ G N H P P A MH
Sbjct: 337 KGLNTVAQLLFTHPPKES------DVLGAHNSGPNVAHLPNFPEALMH------------ 378
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
G+G S PP + ++LCS+ K+GG+IGKGG
Sbjct: 379 ------------GHG------------SVPP-------EPLTFRLLCSSDKVGGIIGKGG 407
Query: 418 FNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKT--SEFS 475
N+K +Q +TG I V D S++R++ S + S +AIL +Q K + +
Sbjct: 408 NNIKSIQNDTGCEIKVLDTVPKSEDRIVFISGPAHPGDGISPAQNAILHVQRKIVPTSNT 467
Query: 476 EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVD 535
++G RL+V ++VGC+LG+GG +I EMR+ + A I +V ++ K+ P + E +V
Sbjct: 468 KEGPAICRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHI-IVLSKDKIPKGVPENDE-VVQ 525
Query: 536 IRGSSEHLISA 546
I G+SE + A
Sbjct: 526 ISGASEAIQEA 536
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/206 (33%), Positives = 108/206 (52%), Gaps = 28/206 (13%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
G+ P +R+LC S K+GG+IGK GN +KS++ +T +I V DT+P SE+R++ I
Sbjct: 381 GSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFI--- 437
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
S + + P AQ+A+L V +I+ + + E I
Sbjct: 438 -------------SGPAHPGDGISP---AQNAILHVQRKIV--------PTSNTKEGPAI 473
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
RL+V N VGCLLGK G +I +R +GA+I VL D++P DE+VQISG
Sbjct: 474 -CRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEA 532
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFP 326
+ AL +++ L + +D+ S+ P
Sbjct: 533 IQEALMQITARLRNHLFRDRMASTVP 558
>gi|115479947|ref|NP_001063567.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|113631800|dbj|BAF25481.1| Os09g0498600 [Oryza sativa Japonica Group]
gi|215695028|dbj|BAG90219.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 398
Score = 122 bits (307), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 119/438 (27%), Positives = 190/438 (43%), Gaps = 75/438 (17%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V+R++C + +G +IGK G+ +++L+ ET A I + + SEERVI+I
Sbjct: 25 EIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVI--------- 75
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+A E M H AQDA+L+VH RI E + +++S +TARLLV
Sbjct: 76 --------SAHENSEMM--HSPAQDAVLRVHSRISESSM---------DKSSAVTARLLV 116
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+ +GCLLGK G +I +R TGA IR+ +++P CA DE+VQ++G + AL
Sbjct: 117 PSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALL 176
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTP 366
++ + KP ++PP HP PA GMP P
Sbjct: 177 HITGRIRDVIIPMKPHPGGGMPPYPPGGNAPP-----HHP---RQEPAPPHPTGGMPPYP 228
Query: 367 WMGGYGDQPSRMGSGSI---NSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
D+P MG + PP M + A+ ++ S G +GG L
Sbjct: 229 MPSFRADRP--MGPFDMVDHRPPPPHSMEHMGAD---RMPYSYG-----CEQGGGPRPFL 278
Query: 424 QQETGASIHVE----DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT 479
Q + ++ E +AP + E V A +G +Q + N T
Sbjct: 279 DQPSPSAWAPEAPNSEAPRNMPETVPPADFRKGAVAGTNQ----VATPSNAT-------- 326
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+++P +G I G G + E+++ + GA + + P PG + +V I G
Sbjct: 327 ---EVIIPRKYIGFICGANGSDLAEIKKMS-------GATITVHHPKPGDANALVIICGD 376
Query: 540 SEHLISAHGTYQSFMTSG 557
+ A +F+ G
Sbjct: 377 PDQTKKAQSLLHAFIFCG 394
Score = 108 bits (269), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 95/174 (54%), Gaps = 14/174 (8%)
Query: 382 SINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD 441
S N PG V E +++C +G +IGKGG ++ LQ ETGASI + + +DS+
Sbjct: 10 SSNMAAPGPRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSE 69
Query: 442 ERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS--EKGTITTRLLVPSSKVGCILGQGG 499
ERVI SA E S DA+L++ ++ SE S + +T RLLVPS +GC+LG+GG
Sbjct: 70 ERVIVISAHENSEMMHSPAQDAVLRVHSRISESSMDKSSAVTARLLVPSQHIGCLLGKGG 129
Query: 500 HVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSF 553
+I EMR+ T A IR+ G +E I ++ L+ G++QS
Sbjct: 130 SIIAEMRKITGAGIRIFG------------NEQIPRCAQRNDELVQVTGSFQSI 171
>gi|168039902|ref|XP_001772435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676232|gb|EDQ62717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 122 bits (306), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 65/194 (33%), Positives = 111/194 (57%), Gaps = 27/194 (13%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P +K+GG+IG+ G VK + EET+++I + + +PG+ ER++++
Sbjct: 10 PGDNVFRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMV------- 62
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE----NSTI 240
SA E + ++ P A + LL+VH R+IE G D E + +
Sbjct: 63 ---------SAREDPEAAISP---AMEGLLRVHRRVIE----GAEPESVDAEIAPGGAPV 106
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
++RLLV G L+G++G I+ ++ +GAN+RVLPA+ LP CA+ D +V++ G P
Sbjct: 107 SSRLLVAATQAGSLIGRQGATIKSIQDTSGANVRVLPAEELPLCALADDRVVEVQGDPRN 166
Query: 301 AKRALYEVSTLLHQ 314
+RA+ V + L +
Sbjct: 167 VQRAMELVVSHLRK 180
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/130 (24%), Positives = 70/130 (53%), Gaps = 11/130 (8%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+GG+IG+ G VK++ +ET + I + + + ER++ SA E S
Sbjct: 15 FRLVVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP 74
Query: 460 TIDAILQLQNKTSEFSEKGT-----------ITTRLLVPSSKVGCILGQGGHVINEMRRR 508
++ +L++ + E +E + +++RLLV +++ G ++G+ G I ++
Sbjct: 75 AMEGLLRVHRRVIEGAEPESVDAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDT 134
Query: 509 TQADIRVVGA 518
+ A++RV+ A
Sbjct: 135 SGANVRVLPA 144
>gi|226530329|ref|NP_001151982.1| nucleic acid binding protein [Zea mays]
gi|195651499|gb|ACG45217.1| nucleic acid binding protein [Zea mays]
gi|224029689|gb|ACN33920.1| unknown [Zea mays]
gi|413947861|gb|AFW80510.1| nucleic acid binding protein [Zea mays]
Length = 705
Score = 121 bits (304), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 116/388 (29%), Positives = 178/388 (45%), Gaps = 56/388 (14%)
Query: 187 TQNKDDDSAAETKKESMEPHCA-------------AQDALLKVHDRIIEEDLFGGMASDD 233
T+ K+D K E +P A A A+ V DRI A++
Sbjct: 168 TEEKNDSEKEHNKGEKDDPLVAKVTKLEPERVIPLALKAVSLVFDRI--------FATEG 219
Query: 234 DNENSTITA-------RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+NE +A R+LV + G LLGK G V++++ ++ G IRVL D LP CA+
Sbjct: 220 NNETGNASAASAPVSLRMLVLYSQAGWLLGKGGSVVKQMAADNGCEIRVL-KDNLPSCAL 278
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
D++ QI+G+ + ++ L VS +L +P K+ + + + D P
Sbjct: 279 LNDKLCQITGEIDSVRKGLNAVSEVLLAHPPKET--DAVADVHSSGSSSRSLFSQPDGLP 336
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGS---INSCPP--GQMGEVSAEFSMK 401
G S+ H P G P +G ++ PP G S +
Sbjct: 337 SG------MQSNFH----IPLQG-----PPSQANGPFDIVDLQPPIHGHASVAIESLSFR 381
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTI 461
+LC K+G +IGKGG VK +Q +TG I V D +D+R+I S + S
Sbjct: 382 MLCPQDKVGSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISISGPAHPSDGISPAQ 441
Query: 462 DAILQLQNKT---SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGA 518
+AIL +Q K S ++G T RL+V ++VGC+LG+GG +I EMR+ + A I VV +
Sbjct: 442 NAILHVQRKIMLPSSDKKEGPATCRLIVSGNQVGCVLGKGGSIIAEMRKLSGAFI-VVLS 500
Query: 519 RVKLQDPHPGSSECIVDIRGSSEHLISA 546
+ K+ P E ++ I GS E + A
Sbjct: 501 KDKIPRGVPEHDE-VIQINGSCEAIQEA 527
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 66/197 (33%), Positives = 103/197 (52%), Gaps = 27/197 (13%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+LCP K+G +IGK GNIVK+++ +T +I V DT+P +++R+I I
Sbjct: 380 FRMLCPQDKVGSIIGKGGNIVKTIQNDTGCEIKVLDTVPKTDDRIISI------------ 427
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
S + + P AQ+A+L V +I M D + T RL+V N
Sbjct: 428 ----SGPAHPSDGISP---AQNAILHVQRKI--------MLPSSDKKEGPATCRLIVSGN 472
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VGC+LGK G +I +R +GA I VL D++P DE++QI+G + AL +V+
Sbjct: 473 QVGCVLGKGGSIIAEMRKLSGAFIVVLSKDKIPRGVPEHDEVIQINGSCEAIQEALMQVT 532
Query: 310 TLLHQNPRKDKPPSSFP 326
L + +D+ P+ P
Sbjct: 533 ARLRNHLFRDRMPAVGP 549
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 14/114 (12%)
Query: 92 KRPNNQFKRKGVVGIKKGNWSNS---SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGN 148
KRP F+R+ +G W + S +S +P ++RILCP+ K G VIGK G
Sbjct: 9 KRP---FQRRSSDYDGRGKWQKTKHPSPHKSQFKIEPGVPIFRILCPASKSGNVIGKGGA 65
Query: 149 IVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKES 202
I+ +R+ET+ +I V PG +ERVI I ++ NKD+++ +E E+
Sbjct: 66 IIAKIRQETRMRIRVDRAAPGCDERVIFITAA--------NKDEEAGSEQGGEN 111
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA 449
+ILC A K G VIGKGG + +++QET I V+ A DERVI +A
Sbjct: 47 FRILCPASKSGNVIGKGGAIIAKIRQETRMRIRVDRAAPGCDERVIFITA 96
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 15/110 (13%)
Query: 476 EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVD 535
E G R+L P+SK G ++G+GG +I ++R+ T+ IRV A PG E ++
Sbjct: 41 EPGVPIFRILCPASKSGNVIGKGGAIIAKIRQETRMRIRVDRA-------APGCDERVIF 93
Query: 536 IR--------GSSEHLISAHGTYQSFMTSGQSMKVQPSSYQNINPQQSSC 577
I GS + + G S + K S QN++P++++C
Sbjct: 94 ITAANKDEEAGSEQGGENDGGAAASTGGDHEKDKDNNSKEQNVDPEENNC 143
>gi|212723602|ref|NP_001132277.1| uncharacterized protein LOC100193713 [Zea mays]
gi|194693942|gb|ACF81055.1| unknown [Zea mays]
Length = 510
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 87/120 (72%), Gaps = 1/120 (0%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD-SDERVIRASAFEGLWN 455
EFS++ILC++ IG VIGK G NV++++Q+TGA I V++ D S ER+I S+ E
Sbjct: 32 EFSIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIISSNEIPAE 91
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
P S I+A++ L +K S SEK +TRL+VPSSKVGCI+G+GG VI +MRRRT A+IRV
Sbjct: 92 PISPAIEALILLHDKVSAPSEKHHSSTRLVVPSSKVGCIIGEGGKVITDMRRRTGAEIRV 151
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 31/190 (16%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP-GSEERVIIIYSSPTKIAKTQN 189
RILC S IG VIGK+G V+ + ++T A+I V + S ER+III
Sbjct: 36 RILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIII------------ 83
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
S+ E E + P A +AL+ +HD++ A + + +ST RL+VP++
Sbjct: 84 ----SSNEIPAEPISP---AIEALILLHDKV--------SAPSEKHHSST---RLVVPSS 125
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VGC++G+ G VI +R TGA IRV P DE+VQ++G P +A+ AL E++
Sbjct: 126 KVGCIIGEGGKVITDMRRRTGAEIRVYSKADKPKYLSFDDELVQVAGPPTIARGALTEIA 185
Query: 310 TLLHQNPRKD 319
+ L +D
Sbjct: 186 SRLRTRTLRD 195
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 7/86 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+S +G I+G GG + E+R+ V GAR++L + H GSSE +V+I+G+
Sbjct: 422 TIELRIPNSSLGSIVGAGGVNLAEIRQ-------VSGARLRLHEAHAGSSESVVEIQGTL 474
Query: 541 EHLISAHGTYQSFMTSGQSMKVQPSS 566
+ +A Q F+++ + QP S
Sbjct: 475 DQAKAAQSLLQGFISANSRQQQQPYS 500
>gi|302814684|ref|XP_002989025.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
gi|300143126|gb|EFJ09819.1| hypothetical protein SELMODRAFT_447544 [Selaginella moellendorffii]
Length = 1034
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 107/330 (32%), Positives = 162/330 (49%), Gaps = 44/330 (13%)
Query: 138 KIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAE 197
KIG VIGK G+ +K LR+ET A I +AD + +E+R ++I S K + D S AE
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISS------KNEGVSDRSCAE 565
Query: 198 TKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD---DNENSTITARLLVPNNMVGCL 254
ALL+V I+ +D G S ++ S RLL+ + G L
Sbjct: 566 L-------------ALLEVVT-ILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSL 611
Query: 255 LGKRGDVIQRLRSETGANIRVLPADRLPPC--AMNTDEMVQISGKPNVAKRALYEVSTLL 312
+GK G I+ +R + A++RVLP+D+LP C A TD +VQISG+ + A+ V+ L
Sbjct: 612 IGKAGANIKNIRGSSSASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANL 671
Query: 313 HQNPRKDKPPSSFPQAY----------GGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
NP K+ P++ P+A GQ P + +A ++ SS H +
Sbjct: 672 RDNPPKETVPTN-PEAKTAYFLGIDGNTGQQVLLPHSSVAAVYGHSPSSMALYGLQPHPL 730
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+ GG Q + + PP + +VSAE S+ + +GG+IGKGGF++
Sbjct: 731 AGPAYAGGVLAQAPPLYANPAARLPP-MLPKVSAEMSV----PSSVMGGLIGKGGFHISH 785
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEG 452
++ +GA+I V + S ER I FEG
Sbjct: 786 MRSVSGATIKVNGSKESSVERTI---LFEG 812
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVED-APTDSDERVIRASAFEGLWNPRSQTIDAILQ 466
KIG VIGK G +K+L+ ETGA I + D T D V+ +S EG+ + RS A+L+
Sbjct: 512 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGV-SDRSCAELALLE 570
Query: 467 LQNKTSEFSEKGTIT-------------TRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + T + TRLL+ S+ G ++G+ G I +R + A +
Sbjct: 571 VVTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASV 630
Query: 514 RVV 516
RV+
Sbjct: 631 RVL 633
>gi|124359392|gb|ABN05856.1| KH, type 1 [Medicago truncatula]
Length = 564
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 135/245 (55%), Gaps = 23/245 (9%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ ++I+C + +IGGVIGK GNI+++L+ ET A ++V ++ E+R+I I
Sbjct: 128 EITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITI--------- 178
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+A+E+ + P AQ A + V R +E + G+ S N S++TA+L+V
Sbjct: 179 -------TASESPESRYSP---AQKATVLVFSRSVEAGIEKGIDSGL-NTGSSVTAQLVV 227
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
+N VGCLLGK G ++ +R TGA+IR++ D++ CA + D++VQISG+ + + ALY
Sbjct: 228 SSNQVGCLLGKGGVIVSEMRKATGASIRIVGTDKVSKCASDNDQVVQISGEFSNVQDALY 287
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGG-QNFHSPPAPMADMHPLGN-SSWPARNSSLHGMPS 364
+ L N S+ ++ Q+ SP + D+ PLG+ SS A ++ +
Sbjct: 288 NATGRLRDNLFGGTLKSAGTRSLSSVQSDTSPYGRLRDV-PLGSQSSLRADTNAFVRLRD 346
Query: 365 TPWMG 369
P +G
Sbjct: 347 VPLVG 351
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 51/131 (38%), Positives = 83/131 (63%), Gaps = 10/131 (7%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
E + KI+CS +IGGVIGKGG ++ LQ ETGA++ V + + ++R+I +A E +
Sbjct: 128 EITFKIICSNDRIGGVIGKGGNIIRALQSETGATVSVGPSVAECEDRLITITASESPESR 187
Query: 457 RSQTIDAILQLQNKTSEFS-EKG---------TITTRLLVPSSKVGCILGQGGHVINEMR 506
S A + + +++ E EKG ++T +L+V S++VGC+LG+GG +++EMR
Sbjct: 188 YSPAQKATVLVFSRSVEAGIEKGIDSGLNTGSSVTAQLVVSSNQVGCLLGKGGVIVSEMR 247
Query: 507 RRTQADIRVVG 517
+ T A IR+VG
Sbjct: 248 KATGASIRIVG 258
>gi|302803885|ref|XP_002983695.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
gi|300148532|gb|EFJ15191.1| hypothetical protein SELMODRAFT_445667 [Selaginella moellendorffii]
Length = 1020
Score = 120 bits (302), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 162/330 (49%), Gaps = 44/330 (13%)
Query: 138 KIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAE 197
KIG VIGK G+ +K LR+ET A I +AD + +E+R ++I S K + D + AE
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISS------KNEGGSDRTCAE 566
Query: 198 TKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD---DNENSTITARLLVPNNMVGCL 254
ALL+V I+ +D G S ++ S RLL+ + G L
Sbjct: 567 L-------------ALLEVVT-ILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSL 612
Query: 255 LGKRGDVIQRLRSETGANIRVLPADRLPPC--AMNTDEMVQISGKPNVAKRALYEVSTLL 312
+GK G I+ +R + A++RVLP+D+LP C A TD +VQISG+ + A+ V+ L
Sbjct: 613 IGKAGANIKNIRGSSSASVRVLPSDQLPLCSAACETDRLVQISGEVAAVQMAIELVAANL 672
Query: 313 HQNPRKDKPPSSFPQA----------YGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
NP K+ P++ P+A GQ P + +A ++ SS H +
Sbjct: 673 RDNPPKETVPTT-PEAKTAYFLGIDGKTGQQVLLPHSSVAAVYGHSPSSMALYGLQPHPL 731
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+ GG Q + + PP + +VSAE S+ + +GG+IGKGGF++
Sbjct: 732 AGPAYAGGVLAQAPPLYANPAARLPP-MLPKVSAEMSV----PSSVMGGLIGKGGFHISH 786
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEG 452
++ +GA+I V + S ER I FEG
Sbjct: 787 MRSVSGATIKVNGSKESSVERTI---LFEG 813
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 61/122 (50%), Gaps = 13/122 (10%)
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
KIG VIGK G +K+L+ ETGA I + D +++R + S+ + R+ A+L++
Sbjct: 513 KIGKVIGKKGSQIKKLRDETGAHIKIADPMNTTEDRAVLISSKNEGGSDRTCAELALLEV 572
Query: 468 QNKTSEFSEKGTIT-------------TRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ + T + TRLL+ S+ G ++G+ G I +R + A +R
Sbjct: 573 VTILLKDGDGATPSAAIGPQHQGSPNLTRLLIAGSQAGSLIGKAGANIKNIRGSSSASVR 632
Query: 515 VV 516
V+
Sbjct: 633 VL 634
>gi|116787223|gb|ABK24418.1| unknown [Picea sitchensis]
gi|224286491|gb|ACN40952.1| unknown [Picea sitchensis]
Length = 481
Score = 120 bits (300), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 155/348 (44%), Gaps = 70/348 (20%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R+L P++ +GG+IG+ G VK + EET+++I + + + G+ ER +++
Sbjct: 82 PGDNVFRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMV------- 134
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE--DLFGGMASDDDNENSTITA 242
K+E P A D +L+VH RIIE D G + + TI+
Sbjct: 135 ------------SAKEEPEAPVSPAMDGILRVHKRIIEGGPDGRGELGRAQQGGSGTIST 182
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
RLLV G L+G++G I+ ++ +GA +RVL A+ LP CA+ D +V++ G+
Sbjct: 183 RLLVAGTQAGSLIGRQGATIKAIQEGSGAIVRVLAAEDLPFCALADDRLVEVQGEAGSVH 242
Query: 303 RA-------------------LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMAD 343
+A L+E + P+ ++ + P G N S P +
Sbjct: 243 KAVELIVSHLRKFLVDRSVLPLFEADRTIGNQPQIEE---NLPHQSWGHN-QSSSVPSSG 298
Query: 344 MHPLGNSSW----------------PARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCP 387
LGN+ + P + HG+ YG PS G N P
Sbjct: 299 GAGLGNTQYMSSAFQHDNYYPPSDLPLESQGHHGLSV------YGRDPSLAGHSVANPPP 352
Query: 388 PGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
+ +V+ M+I S +IG G N+ +++ +GA+I V++
Sbjct: 353 APVITQVTQH--MQIPLSYAD--AIIGTAGANISYMRRNSGATIAVQE 396
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 66/132 (50%), Gaps = 13/132 (9%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
++L +GG+IG+ G VK++ +ET + I + + + ER + SA E P S
Sbjct: 87 FRLLVPTQMVGGIIGRKGEFVKKMCEETRSRIKILEGLRGTPERTVMVSAKEEPEAPVSP 146
Query: 460 TIDAILQLQNKTSEF-------------SEKGTITTRLLVPSSKVGCILGQGGHVINEMR 506
+D IL++ + E GTI+TRLLV ++ G ++G+ G I ++
Sbjct: 147 AMDGILRVHKRIIEGGPDGRGELGRAQQGGSGTISTRLLVAGTQAGSLIGRQGATIKAIQ 206
Query: 507 RRTQADIRVVGA 518
+ A +RV+ A
Sbjct: 207 EGSGAIVRVLAA 218
>gi|297806983|ref|XP_002871375.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
gi|297317212|gb|EFH47634.1| hypothetical protein ARALYDRAFT_325507 [Arabidopsis lyrata subsp.
lyrata]
Length = 525
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 114/407 (28%), Positives = 189/407 (46%), Gaps = 43/407 (10%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIY-----SSPT 182
++RIL ++G VIGK G +++ L+E T ++I V S RVI I +S
Sbjct: 24 VLFRILGHVSQVGDVIGKDGRVIRQLKESTNSQIWVEKAPLDSLYRVITIIADVGSTSRV 83
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
K+ N + E +E AQ AL++V + + FG +ST+++
Sbjct: 84 KLGVIVNNASNRKKEEVQEQEVEVSRAQGALIRVFEAL--NVRFG--------TSSTVSS 133
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
RLL+ V ++GK G++++ +R ETG N+ + + LP CA D MV+I G K
Sbjct: 134 RLLMEACHVVTVIGKGGELMEMIRKETGCNVEICQYN-LPSCADPDDVMVKIEGNVFAVK 192
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGG--QNFHSPPAPMADMHPLGNSSWPARNSSLH 360
+ L +S+ R S F + G N + P ++ N
Sbjct: 193 KVLVSISS------RLQACQSIFKKKMVGNPHNMQTNVVPREALYRASN--------VFQ 238
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSA-EFSMKILCSAGKIGGVIGKGGFN 419
G S + P + S N P + E + + +KILCS +IG VIG G
Sbjct: 239 GDISVSRLKHRELDP--LESLHRNLSQPRKDSEDNKQQVVLKILCSKERIGRVIGNGRAT 296
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL-----QNKTSEF 474
++ LQ ETGA I + D DE + +A E S + A++ + +N T++
Sbjct: 297 IRDLQSETGAFITLGSNRLDCDEGLFTITASEDPNAKNSPSQRALVLVFSKMYENTTAKV 356
Query: 475 SEKG---TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGA 518
+ G +IT RL+V S+++ C++G+ GH+ + +++RT A I V+
Sbjct: 357 LDSGLTSSITARLVVRSNQINCLMGEEGHIKSTIQQRTGAFITVLNV 403
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/201 (30%), Positives = 98/201 (48%), Gaps = 26/201 (12%)
Query: 116 REQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVI 175
R+ S N Q V +ILC +IG VIG ++ L+ ET A IT+ +E +
Sbjct: 265 RKDSEDNKQ--QVVLKILCSKERIGRVIGNGRATIRDLQSETGAFITLGSNRLDCDEGLF 322
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN 235
I +S AK +Q AL+ V ++ E + D
Sbjct: 323 TITASEDPNAKNS-------------------PSQRALVLVFSKMYENTTAKVL---DSG 360
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
S+ITARL+V +N + CL+G+ G + ++ TGA I VL ++ P C +++VQIS
Sbjct: 361 LTSSITARLVVRSNQINCLMGEEGHIKSTIQQRTGAFITVLNVEQNPKCVSENNQIVQIS 420
Query: 296 GK-PNVAKRALYEVSTLLHQN 315
G PNV K A+ +V+++L ++
Sbjct: 421 GAFPNV-KEAINQVTSMLRED 440
>gi|297734587|emb|CBI16638.3| unnamed protein product [Vitis vinifera]
Length = 346
Score = 119 bits (299), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 164/367 (44%), Gaps = 95/367 (25%)
Query: 92 KRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVK 151
KRP + GV+ G ++ R ++ D ++RI+ PSR+IG VIGK G+ ++
Sbjct: 27 KRPRD--DDGGVIASATGEVADDHRSPKR-RAKNQDVLFRIVVPSRQIGKVIGKEGSRIQ 83
Query: 152 SLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQD 211
+REET+A I +AD I EERVIII S K+S A++
Sbjct: 84 KIREETKATIKIADAIARHEERVIIISS--------------------KDSENVISDAEN 123
Query: 212 ALLKVHDRIIEEDLFGGMASDDDNENSTITA---------RLLVPNNMVGCLLGKRGDVI 262
ALL+V I++E DD N ++ RLL+ + GCL+G G I
Sbjct: 124 ALLQVASLILKE--------DDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSGQNI 175
Query: 263 QRLRSETGANIRVLPADRLPPC--AMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK 320
++LR+ +GA I +LP ++LP C A ++D MVQISG +AL E+ L +N
Sbjct: 176 EKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLREN----- 230
Query: 321 PPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGS 380
PP + + P+ N P+T
Sbjct: 231 ----------------PPRQVISISPIYN-------------PNT--------------- 246
Query: 381 GSINSCPPGQMGEVSAEF-SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
N + SA++ ++ ++ +GG+IG+ G N+ +++ E+GA I V +
Sbjct: 247 ---NRTSQQYLDPASADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGE 303
Query: 440 SDERVIR 446
+ R I+
Sbjct: 304 QNHRQIQ 310
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQT 460
+I+ + +IG VIGK G ++++++ET A+I + DA +ERVI S+ + N S
Sbjct: 63 RIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKDS-ENVISDA 121
Query: 461 IDAILQLQNKTSEFSEKGTI------------TTRLLVPSSKVGCILGQGGHVINEMRRR 508
+A+LQ+ + + + T RLL+ S+ GC++G G I ++R
Sbjct: 122 ENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNS 181
Query: 509 TQADIRVV 516
+ A I ++
Sbjct: 182 SGATITIL 189
>gi|222641854|gb|EEE69986.1| hypothetical protein OsJ_29891 [Oryza sativa Japonica Group]
Length = 609
Score = 119 bits (298), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 66/183 (36%), Positives = 103/183 (56%), Gaps = 28/183 (15%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ V+R++C + +G +IGK G+ +++L+ ET A I + + SEERVI+I
Sbjct: 236 EIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSEERVIVI--------- 286
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+A E M H AQDA+L+VH RI E + +++S +TARLLV
Sbjct: 287 --------SAHENSEMM--HSPAQDAVLRVHSRISESSM---------DKSSAVTARLLV 327
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P+ +GCLLGK G +I +R TGA IR+ +++P CA DE+VQ++G + AL
Sbjct: 328 PSQHIGCLLGKGGSIIAEMRKITGAGIRIFGNEQIPRCAQRNDELVQVTGSFQSIQDALL 387
Query: 307 EVS 309
++
Sbjct: 388 HIT 390
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 65/174 (37%), Positives = 95/174 (54%), Gaps = 14/174 (8%)
Query: 382 SINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD 441
S N PG V E +++C +G +IGKGG ++ LQ ETGASI + + +DS+
Sbjct: 221 SSNMAAPGPRFFVEQEIVFRMICLNEMVGSIIGKGGSTIRALQSETGASIKIIEPNSDSE 280
Query: 442 ERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS--EKGTITTRLLVPSSKVGCILGQGG 499
ERVI SA E S DA+L++ ++ SE S + +T RLLVPS +GC+LG+GG
Sbjct: 281 ERVIVISAHENSEMMHSPAQDAVLRVHSRISESSMDKSSAVTARLLVPSQHIGCLLGKGG 340
Query: 500 HVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSF 553
+I EMR+ T A IR+ G +E I ++ L+ G++QS
Sbjct: 341 SIIAEMRKITGAGIRIFG------------NEQIPRCAQRNDELVQVTGSFQSI 382
>gi|359489188|ref|XP_002272998.2| PREDICTED: KH domain-containing protein At4g18375-like [Vitis
vinifera]
Length = 343
Score = 119 bits (298), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 103/367 (28%), Positives = 164/367 (44%), Gaps = 95/367 (25%)
Query: 92 KRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVK 151
KRP + GV+ G ++ R ++ D ++RI+ PSR+IG VIGK G+ ++
Sbjct: 27 KRPRD--DDGGVIASATGEVADDHRSPKR-RAKNQDVLFRIVVPSRQIGKVIGKEGSRIQ 83
Query: 152 SLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQD 211
+REET+A I +AD I EERVIII S K+S A++
Sbjct: 84 KIREETKATIKIADAIARHEERVIIISS--------------------KDSENVISDAEN 123
Query: 212 ALLKVHDRIIEEDLFGGMASDDDNENSTITA---------RLLVPNNMVGCLLGKRGDVI 262
ALL+V I++E DD N ++ RLL+ + GCL+G G I
Sbjct: 124 ALLQVASLILKE--------DDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSGQNI 175
Query: 263 QRLRSETGANIRVLPADRLPPC--AMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK 320
++LR+ +GA I +LP ++LP C A ++D MVQISG +AL E+ L +N
Sbjct: 176 EKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLREN----- 230
Query: 321 PPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGS 380
PP + + P+ N P+T
Sbjct: 231 ----------------PPRQVISISPIYN-------------PNT--------------- 246
Query: 381 GSINSCPPGQMGEVSAEF-SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
N + SA++ ++ ++ +GG+IG+ G N+ +++ E+GA I V +
Sbjct: 247 ---NRTSQQYLDPASADYVTLNMMIPETLVGGLIGRCGSNISRIRNESGAMIKVYGGKGE 303
Query: 440 SDERVIR 446
+ R I+
Sbjct: 304 QNHRQIQ 310
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 67/128 (52%), Gaps = 13/128 (10%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQT 460
+I+ + +IG VIGK G ++++++ET A+I + DA +ERVI S+ + N S
Sbjct: 63 RIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKDS-ENVISDA 121
Query: 461 IDAILQLQNKTSEFSEKGTI------------TTRLLVPSSKVGCILGQGGHVINEMRRR 508
+A+LQ+ + + + T RLL+ S+ GC++G G I ++R
Sbjct: 122 ENALLQVASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNS 181
Query: 509 TQADIRVV 516
+ A I ++
Sbjct: 182 SGATITIL 189
>gi|296087074|emb|CBI33448.3| unnamed protein product [Vitis vinifera]
Length = 333
Score = 119 bits (297), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 135/287 (47%), Gaps = 57/287 (19%)
Query: 148 NIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHC 207
I+K LR +T+ KI + +T+ EE V+ IY+ + N DDS
Sbjct: 8 EIIKQLRVDTKFKIRIDETVSRCEELVVTIYN----FSDETNAFDDSYTFVS-------- 55
Query: 208 AAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRS 267
QDAL +VHD+++ E + S+D E S +T +LLV ++ +GC++GK G +IQ + S
Sbjct: 56 PTQDALFRVHDKVVSEK----VHSEDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYS 111
Query: 268 ETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQ 327
E+GA I +L D L CA++ DE+VQISG+ + R ++
Sbjct: 112 ESGAQIYILKNDHLLSCALSFDELVQISGERPLLGRLFIKLHLF---------------- 155
Query: 328 AYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCP 387
F +A + P+G SS SL G S W S S+ S P
Sbjct: 156 ------FMIIQHLLASIVPIGYSS----GGSLIG-DSGDW------------SRSLYSVP 192
Query: 388 PGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 434
+ S EFS++++C G G+ GKG + Q++ E A I V+
Sbjct: 193 RDEAS--SKEFSLRLVCPIGNTSGMFGKGSVIINQIRWEFRAIIKVD 237
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 59/111 (53%), Gaps = 14/111 (12%)
Query: 420 VKQLQQETGASIHVEDAPTDSDERVI-------RASAFEGLWNPRSQTIDAILQLQNK-- 470
+KQL+ +T I +++ + +E V+ +AF+ + S T DA+ ++ +K
Sbjct: 10 IKQLRVDTKFKIRIDETVSRCEELVVTIYNFSDETNAFDDSYTFVSPTQDALFRVHDKVV 69
Query: 471 -----TSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ +F E +T +LLV S ++GC++G+GG +I + + A I ++
Sbjct: 70 SEKVHSEDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSESGAQIYIL 120
>gi|242045198|ref|XP_002460470.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
gi|241923847|gb|EER96991.1| hypothetical protein SORBIDRAFT_02g028920 [Sorghum bicolor]
Length = 371
Score = 116 bits (290), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 117/428 (27%), Positives = 181/428 (42%), Gaps = 76/428 (17%)
Query: 139 IGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAET 198
+G +IGK G+ +++L+ ET A I + + + S+ERV+ I +A
Sbjct: 8 VGSIIGKGGSTIRALQSETGACIKILELVADSDERVVAI-----------------SARE 50
Query: 199 KKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKR 258
+ M H AQDA+++V+ RI E + + +S ARLLVP+ +GCLLGK
Sbjct: 51 NSDMM--HSPAQDAVVRVYSRISEASM---------DRSSPTPARLLVPSQHIGCLLGKG 99
Query: 259 GDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRK 318
G +I +R TGA+IR+ +++P CA DEMVQ++G + AL LH R
Sbjct: 100 GSIITEMRKITGASIRIFGNEQIPRCAQRNDEMVQVTGSFQSIQDAL------LHITGRI 153
Query: 319 DKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH---GMPSTPWMGGYGDQP 375
P GG PP P P+ S LH GMP P D P
Sbjct: 154 RDVILPKPHPSGGM----PPYPPVGNIPVHQSRQEPPPPHLHPSGGMPPYPMHSFRPDAP 209
Query: 376 SRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
MG P + + + ++ S G G+ G L+Q + + E
Sbjct: 210 --MGHFETGDHRPPPVHSMEYMGADRMPYSYG------GEQGGPRPFLEQPSPRTWPPEA 261
Query: 436 APTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI------TTRLLVPSS 489
T+S+ PR+ DA+L + + + + TT +++P
Sbjct: 262 PRTNSEA-------------PRNMP-DAVLATDLRKGPVASENQVATPTSTTTEVVIPCK 307
Query: 490 KVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGT 549
+G + G G I E+R+ + GA + + DP PG + IV I G E A
Sbjct: 308 YIGFVCGNSGSEIEEIRQMS-------GASITVHDPKPGDTNSIVVICGDPEQTKKAQSL 360
Query: 550 YQSFMTSG 557
+F+ G
Sbjct: 361 IHAFIFCG 368
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 36/67 (53%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPT 182
+ P T ++ P + IG V G +G+ ++ +R+ + A ITV D PG +++I P
Sbjct: 293 ATPTSTTTEVVIPCKYIGFVCGNSGSEIEEIRQMSGASITVHDPKPGDTNSIVVICGDPE 352
Query: 183 KIAKTQN 189
+ K Q+
Sbjct: 353 QTKKAQS 359
>gi|294462548|gb|ADE76820.1| unknown [Picea sitchensis]
Length = 340
Score = 115 bits (289), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 91/326 (27%), Positives = 144/326 (44%), Gaps = 64/326 (19%)
Query: 153 LREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDA 212
+R+ET A I V D +P +ERVI++ S+ E + + P A
Sbjct: 22 IRQETGANIKVIDQVPDCDERVIVV----------------SSKEFVDDRISPTLEAVLH 65
Query: 213 L-LKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGA 271
L K ++ IEE + IT R LVP+N +GCLLGK G +I +R T A
Sbjct: 66 LQFKTSEKSIEE-----------GKEGVITTRFLVPSNSIGCLLGKGGSIISEMRKRTRA 114
Query: 272 NIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGG 331
NIR++ D +P CA +E+VQ+ G+ +VA+ AL +++T L N KD+ GG
Sbjct: 115 NIRIMSKDNIPKCAGENEELVQVIGEVDVAREALIQIATRLRSNVFKDQD--------GG 166
Query: 332 QNFHSPPAPMADMHPLGN-SSWPARNSSLHG---MPSTPWMGGYGDQPSRMGSGSINS-- 385
N S P ++ G S R L M S P +G G R S S S
Sbjct: 167 SNAGSVVPPSLSLYGRGVPDSGFGRGDELGSTGRMYSLPSLGLEGTASGRYSSASYGSLG 226
Query: 386 --------------------CPPGQM--GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
P G + G + ++++ +G ++G+GG N+ Q+
Sbjct: 227 GVQNGGAGGYGSFSSFSTSRAPAGGLPAGVAKSGSTVEVTIPNKSVGSILGRGGSNISQI 286
Query: 424 QQETGASIHVEDAPTDSDERVIRASA 449
++ +GA + + ++ +RV+ S
Sbjct: 287 REISGAKVKLHESKPGGTDRVVEISG 312
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 52/99 (52%), Positives = 74/99 (74%), Gaps = 4/99 (4%)
Query: 422 QLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS----EK 477
Q++QETGA+I V D D DERVI S+ E + + S T++A+L LQ KTSE S ++
Sbjct: 21 QIRQETGANIKVIDQVPDCDERVIVVSSKEFVDDRISPTLEAVLHLQFKTSEKSIEEGKE 80
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
G ITTR LVPS+ +GC+LG+GG +I+EMR+RT+A+IR++
Sbjct: 81 GVITTRFLVPSNSIGCLLGKGGSIISEMRKRTRANIRIM 119
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +P+ VG ILG+GG I+++R + GA+VKL + PG ++ +V+I G+
Sbjct: 262 TVEVTIPNKSVGSILGRGGSNISQIRE-------ISGAKVKLHESKPGGTDRVVEISGTP 314
Query: 541 EHLISAHGTYQSFMTSGQSMK 561
E +A Q+F SGQ+ +
Sbjct: 315 EQTHAAQSLLQAFAMSGQNSR 335
>gi|334188619|ref|NP_001190612.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010502|gb|AED97885.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 866
Score = 115 bits (287), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 117/458 (25%), Positives = 211/458 (46%), Gaps = 76/458 (16%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D V++ILC + GGVIG G +V+ L ET A I V +T+ EER+I + +S
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASEN---- 506
Query: 187 TQNKDDDSAAETKKESMEPHCA---AQDALLKVHDRIIEEDLFGGMASD---DDNENSTI 240
P C AQ A++ + R+ E +A++ D+ S+I
Sbjct: 507 ------------------PECQSSPAQKAIMLIFSRLFE------LATNKILDNGPRSSI 542
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK-PN 299
TARL+VP + +GC+LGK G ++ +R TGA I++L ++ P C D++VQI+G+ PN
Sbjct: 543 TARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPN 602
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQ---AYGGQNFHSP----PAPMADMHPLGNSSW 352
V + A++ +++ L + + +S + A + F+ P + + N
Sbjct: 603 V-REAIFHITSRLRDSVFSNSMKNSLAKSSSALTTERFYDRQSDNPLSIGSHQSVSN--- 658
Query: 353 PARN-SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGG 411
PA N SSLH ++ G S S S+ + P + + F + SAG
Sbjct: 659 PATNSSSLHRRSEDSFLS--GSHSSVNYSRSVGTDPYIRPED---PFPDRFNPSAGY--- 710
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTD-------SDERVIRASAFEGLWNPRSQTIDAI 464
F + + S H+ +AP+ + R + + A GL + R+ +
Sbjct: 711 ---SHNFGRRFTMDHSDNSHHLTEAPSRLWASPPPAAPRGL-SDASGGLSSARAGHVLGS 766
Query: 465 LQLQNKTSEFSEKGTIT---TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVK 521
L + S + +T + VP++ + + G+ G+ + ++R ++ GARV
Sbjct: 767 LHARLVFSSGHKSAIVTNTTVEIRVPANAMSFVYGEQGYNLEQLR-------QISGARVI 819
Query: 522 LQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQS 559
+ +P G+S+ I+ I G+ + +A +F+ +G++
Sbjct: 820 IHEPPLGTSDRIIVISGTPDQTQAAQNLLHAFILTGET 857
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ- 188
+R+LCP +G VIGK+GN++K L++ T AKI V + GS +RVI I + ++ +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 189 -NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
++ +A KKE AQ AL+KV F +A++ D++ T+ RLL
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKV---------FELLAAEADSD--TVVCRLLTE 157
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
++ G ++GK G ++ +R ETG I + + LP CA DEMV++ G K+AL
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKISIR-IENLPICADTDDEMVEVEGNAIAVKKALVS 216
Query: 308 VSTLLHQNPRKDK 320
+S L DK
Sbjct: 217 ISRCLQNCQSIDK 229
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 37/270 (13%)
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
PP ++ + + KILCS GGVIG GG V+ L ETGA I+V + D +ER+I
Sbjct: 441 PPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIA 500
Query: 447 ASAFEGLWNPRSQTIDA----------ILQL-QNKTSEFSEKGTITTRLLVPSSKVGCIL 495
+A E NP Q+ A + +L NK + + +IT RL+VP+S++GC+L
Sbjct: 501 VTASE---NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVL 557
Query: 496 GQGGHVINEMRRRTQADIRVVGAR------------VKLQDPHPGSSECIVDIRGSSEHL 543
G+GG +++EMR+ T A I+++ V++ P E I I
Sbjct: 558 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
Query: 544 ISAHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQ 603
+ ++ S S ++ + + + Q + ++ SHQ S N T S HR
Sbjct: 618 VFSNSMKNSLAKSSSALTTE----RFYDRQSDNPLSIGSHQ-SVSNPATNSSSLHR---- 668
Query: 604 QSPYQNINPQQSSYPMHTHQGAGTNPHITP 633
+S ++ SS ++ + GT+P+I P
Sbjct: 669 RSEDSFLSGSHSS--VNYSRSVGTDPYIRP 696
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 21/138 (15%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI--------RASAF 450
+ ++LC +G VIGK G +KQLQQ TGA I VE+ P+ S +RVI ++
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 451 EGLWN-------------PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQ 497
G N S+ A++++ + ++ T+ RLL SS G ++G+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGK 167
Query: 498 GGHVINEMRRRTQADIRV 515
GG ++ +R+ T I +
Sbjct: 168 GGQMVGSIRKETGCKISI 185
>gi|168018585|ref|XP_001761826.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686881|gb|EDQ73267.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 355
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 107/185 (57%), Gaps = 28/185 (15%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P +K+GG+IG+ G VK + EET+++I + + +PG+ ER++++
Sbjct: 7 PGDNVFRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMV------- 59
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE----NSTI 240
SA E + ++ P A + LL+VH R+IE G D E + +
Sbjct: 60 ---------SAREDPEAAISP---AMEGLLRVHRRVIE----GAEPESADAEIAPGGAPV 103
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLP-ADRLPPCAMNTDEMVQISGKPN 299
++RLLV G L+G++G I+ ++ +GA +RVLP A+ LP CA+ D +V+++G+P
Sbjct: 104 SSRLLVAATQAGSLIGRQGATIKSIQDSSGATVRVLPAAEELPLCALADDRVVEVTGEPR 163
Query: 300 VAKRA 304
+RA
Sbjct: 164 NVQRA 168
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 71/134 (52%), Gaps = 11/134 (8%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+GG+IG+ G VK++ +ET + I + + + ER++ SA E S
Sbjct: 12 FRLIVPVQKVGGIIGRKGEFVKRMCEETRSRIKILEGVPGTAERIVMVSAREDPEAAISP 71
Query: 460 TIDAILQLQNKTSEFSEKGT-----------ITTRLLVPSSKVGCILGQGGHVINEMRRR 508
++ +L++ + E +E + +++RLLV +++ G ++G+ G I ++
Sbjct: 72 AMEGLLRVHRRVIEGAEPESADAEIAPGGAPVSSRLLVAATQAGSLIGRQGATIKSIQDS 131
Query: 509 TQADIRVVGARVKL 522
+ A +RV+ A +L
Sbjct: 132 SGATVRVLPAAEEL 145
>gi|388511497|gb|AFK43810.1| unknown [Lotus japonicus]
Length = 279
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 56/124 (45%), Positives = 89/124 (71%), Gaps = 4/124 (3%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
EFS++++C G IGGVIGKGG + Q++Q++GA+I V+ + T+ D+ +I S E +
Sbjct: 13 EFSVRVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIAISTKEFFDDS 72
Query: 457 RSQTIDAILQLQNKTSEFSEKG----TITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
S TI+A ++LQ + S+ E+ + TTRLLVPSS++GC++G+GG +I EMRR T+A+
Sbjct: 73 FSPTIEAAVRLQPRCSDKVERDSGIVSFTTRLLVPSSRIGCLIGKGGTIITEMRRLTKAN 132
Query: 513 IRVV 516
IR++
Sbjct: 133 IRIL 136
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 70/187 (37%), Positives = 102/187 (54%), Gaps = 30/187 (16%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R++CP+ IGGVIGK G I+ +R+++ A I V + ++ +I I T+
Sbjct: 17 RVVCPTGNIGGVIGKGGAIINQIRQDSGATIKVDSSATEGDDCLIAI--------STKEF 68
Query: 191 DDDSAAETKKES--MEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
DDS + T + + ++P C+ + +E D G+ S T RLLVP+
Sbjct: 69 FDDSFSPTIEAAVRLQPRCSDK----------VERD--SGIVS--------FTTRLLVPS 108
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ +GCL+GK G +I +R T ANIR+LP + LP A DEMVQISG +VAK AL +V
Sbjct: 109 SRIGCLIGKGGTIITEMRRLTKANIRILPKEDLPKIASEDDEMVQISGDLDVAKDALVQV 168
Query: 309 STLLHQN 315
T L N
Sbjct: 169 LTRLKAN 175
>gi|224077694|ref|XP_002305366.1| predicted protein [Populus trichocarpa]
gi|222848330|gb|EEE85877.1| predicted protein [Populus trichocarpa]
Length = 262
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/154 (43%), Positives = 99/154 (64%), Gaps = 8/154 (5%)
Query: 368 MGGYGDQPSRMG--SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
MG YG G S S+ S P ++ S EFS++++C IG VIGKGG + Q++Q
Sbjct: 1 MGPYGSFKGDTGDWSRSLYSAPRDEL--ASKEFSLRMVCPTANIGAVIGKGGTIINQIRQ 58
Query: 426 ETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TIT 481
E+GA+I V+ + ++ D+ +I SA E + S TI+A L+LQ + SE E+ + T
Sbjct: 59 ESGATIKVDSSASEGDDCLITISAKEICDDQYSPTIEAALRLQPRCSEKMERDSGLFSFT 118
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
TRLLVPSS +GC+LG+GG +I+EMR+ T+A IR+
Sbjct: 119 TRLLVPSSHIGCLLGKGGLIIDEMRKLTKAIIRI 152
Score = 107 bits (268), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 125/271 (46%), Gaps = 48/271 (17%)
Query: 109 GNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
G+WS S + R++CP+ IG VIGK G I+ +R+E+ A I V +
Sbjct: 12 GDWSRSLYSAPRDELASKEFSLRMVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSAS 71
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED--LF 226
++ +I I S +I Q AA ++P C+ + +E D LF
Sbjct: 72 EGDDCLITI--SAKEICDDQYSPTIEAAL----RLQPRCSEK----------MERDSGLF 115
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+ T RLLVP++ +GCLLGK G +I +R T A IR+ D+LP A+
Sbjct: 116 ------------SFTTRLLVPSSHIGCLLGKGGLIIDEMRKLTKAIIRIPRKDKLPKTAL 163
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
+ DEMVQISG ++AK AL ++S L N A+ + S P+ P
Sbjct: 164 DDDEMVQISGDLDIAKDALIQISRRLRAN------------AFDREGLMSAILPVFPYLP 211
Query: 347 -----LGNSSWPARNSSLHGMPSTPWMGGYG 372
L + +R+ HG +T + GGYG
Sbjct: 212 VSAEGLEGRHYDSRDDKRHGRGNT-YAGGYG 241
>gi|147789222|emb|CAN69137.1| hypothetical protein VITISV_022037 [Vitis vinifera]
Length = 587
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 108/179 (60%), Gaps = 16/179 (8%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
+R+LC + +IGGVIGK+G IVK L+ +T A+I V D+ S+ RVI++ + P +
Sbjct: 51 VAFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIA-PASV--- 106
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
+ A + E +E AAQ+A+L+V +RI+E D ++ RLL
Sbjct: 107 ---NRRIALQGSSEEVEAS-AAQEAVLRVFERILEV----AAVVDGVPPGGVVSCRLLAE 158
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG----KPNVAK 302
+ VG ++GK G V++++R E+G+ I+VL A++LP CA +TDEMV+ SG KP++ +
Sbjct: 159 TSQVGSVIGKGGKVVEKIRRESGSKIKVLTAEKLPTCAASTDEMVEHSGSLERKPHLVR 217
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 82/142 (57%), Gaps = 26/142 (18%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI---------RASA 449
+ ++LC A +IGGVIGK G VKQLQ +TGA I VED+P+ SD RVI R A
Sbjct: 52 AFRLLCHASRIGGVIGKSGVIVKQLQSDTGARIRVEDSPSTSDHRVILVIAPASVNRRIA 111
Query: 450 FEGLWNPRSQTI------DAILQLQNKTSEFSE-------KGTITTRLLVPSSKVGCILG 496
+G S+ + +A+L++ + E + G ++ RLL +S+VG ++G
Sbjct: 112 LQG----SSEEVEASAAQEAVLRVFERILEVAAVVDGVPPGGVVSCRLLAETSQVGSVIG 167
Query: 497 QGGHVINEMRRRTQADIRVVGA 518
+GG V+ ++RR + + I+V+ A
Sbjct: 168 KGGKVVEKIRRESGSKIKVLTA 189
>gi|356530005|ref|XP_003533576.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 385
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 95/317 (29%), Positives = 144/317 (45%), Gaps = 88/317 (27%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D ++RI+ PSR+IG VIGK G+ ++ +RE+T+A I +AD I EERVIII S
Sbjct: 101 DVIFRIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISS------- 153
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA---- 242
KD+D E A+ AL ++ I++ED D + S +TA
Sbjct: 154 ---KDND----------EKVTDAEKALEQIAHLILKED-------DSSLDASKVTAGHVA 193
Query: 243 ----RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPC--AMNTDEMVQISG 296
RLL+ + G L+G G I++LR +GA+I VL ++LP C A +D +VQ+SG
Sbjct: 194 ANTIRLLIAGSQAGGLIGMSGQNIEKLRDSSGASITVLAPNQLPLCASAHESDRVVQLSG 253
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN 356
+AL E+ L +N PP + + P N +
Sbjct: 254 DVPAVMKALEEIGCQLREN---------------------PPRQVISISPTYNYAAI--- 289
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
PS P++ P + V+ E L S +GG+IG+
Sbjct: 290 -----RPSQPYLD------------------PTSVDYVTFEM----LISETMVGGLIGRC 322
Query: 417 GFNVKQLQQETGASIHV 433
G N+ +++ E+GA I V
Sbjct: 323 GSNISRIRNESGAMIKV 339
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 15/130 (11%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS------------ 448
+I+ + +IG VIGK G +++++++T A+I + DA +ERVI S
Sbjct: 105 RIVVPSRQIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISSKDNDEKVTDAE 164
Query: 449 -AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
A E + + + D+ L T+ TI RLL+ S+ G ++G G I ++R
Sbjct: 165 KALEQIAHLILKEDDSSLDASKVTAGHVAANTI--RLLIAGSQAGGLIGMSGQNIEKLRD 222
Query: 508 RTQADIRVVG 517
+ A I V+
Sbjct: 223 SSGASITVLA 232
>gi|118485588|gb|ABK94645.1| unknown [Populus trichocarpa]
Length = 294
Score = 114 bits (284), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/154 (42%), Positives = 101/154 (65%), Gaps = 9/154 (5%)
Query: 368 MGGYGDQPSRMG--SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
MG YG G S S+ S P ++ S EFS++++C IG VIGKGG + Q++Q
Sbjct: 1 MGPYGGFKGDTGDWSRSLYSAPRDEL--ASKEFSLRVVCPTANIGAVIGKGGTIINQIRQ 58
Query: 426 ETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG----TIT 481
E+GA+I V+ + + D+ +I SA E +++ S TI+A ++LQ + SE E+ + T
Sbjct: 59 ESGATIKVDSSVAEGDDCLITISAKE-IYDHYSPTIEAAVRLQPRCSEKMERDSGLISFT 117
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
TRLLVPSS++GC+LG+GG +I+EMR+ T+A IR+
Sbjct: 118 TRLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRI 151
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 102/207 (49%), Gaps = 27/207 (13%)
Query: 109 GNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
G+WS S + R++CP+ IG VIGK G I+ +R+E+ A I V ++
Sbjct: 12 GDWSRSLYSAPRDELASKEFSLRVVCPTANIGAVIGKGGTIINQIRQESGATIKVDSSVA 71
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
++ +I I + KE + + +A +++ R E+
Sbjct: 72 EGDDCLITI--------------------SAKEIYDHYSPTIEAAVRLQPRCSEK----- 106
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+ D+ + T RLLVP++ +GCLLGK G +I +R T A IR+ + LP A +
Sbjct: 107 --MERDSGLISFTTRLLVPSSRIGCLLGKGGAIIDEMRKLTKAIIRIPRKENLPKVASDD 164
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQN 315
DEMVQI+G +VAK AL ++S L N
Sbjct: 165 DEMVQIAGDLDVAKDALIQISRRLRAN 191
>gi|61661324|gb|AAX51268.1| FLK [Arabidopsis thaliana]
gi|61661326|gb|AAX51269.1| FLK [Arabidopsis thaliana]
Length = 577
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 107/188 (56%), Gaps = 22/188 (11%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +TV+R+L P++K+G +IG+ G+++K + EET+A+I + D PG+ ER +++
Sbjct: 184 PGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMV------- 236
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
S E + S+ P + D LL+VH RI+ D G AS S ++ RL
Sbjct: 237 ---------SGKEEPESSLPP---SMDGLLRVHMRIV--DGLDGEAS-QAPPPSKVSTRL 281
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP + G L+GK+G ++ ++ + +RVL ++ LP A+ D +V++ G+P RA
Sbjct: 282 LVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRA 341
Query: 305 LYEVSTLL 312
L +++ L
Sbjct: 342 LELIASHL 349
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 8/132 (6%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E ++L A K+G +IG+ G +K++ +ET A I + D P + ER + S E +
Sbjct: 185 GETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPES 244
Query: 456 PRSQTIDAILQ--------LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
++D +L+ L + S+ ++TRLLVP+S+ G ++G+ G + ++
Sbjct: 245 SLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQE 304
Query: 508 RTQADIRVVGAR 519
+ +RV+G+
Sbjct: 305 ASACIVRVLGSE 316
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIR 537
G R+LVP+ KVG I+G+ G VI ++ T+A R+K+ D PG++E V +
Sbjct: 185 GETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRA-------RIKILDGPPGTTERAVMVS 237
Query: 538 GSSE 541
G E
Sbjct: 238 GKEE 241
>gi|326530414|dbj|BAJ97633.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 580
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 87/130 (66%), Gaps = 11/130 (8%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD-SDERVIRASAFEGLWN 455
EFS++ILC++ IG VIG+ G NV+Q++Q+TGA I V++ D S ER+I S+ E +
Sbjct: 66 EFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASGERLIVISSKEIPAD 125
Query: 456 PRSQTIDAILQLQNKTS----------EFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
P S TI+A++ L +K S E S + + TRL+VPS KVGCILG+GG VI EM
Sbjct: 126 PVSPTIEALILLHSKVSASKVSEPSESEPSGEHKLVTRLVVPSKKVGCILGEGGKVITEM 185
Query: 506 RRRTQADIRV 515
RRR A+IRV
Sbjct: 186 RRRIGAEIRV 195
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 117/247 (47%), Gaps = 41/247 (16%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT-IPGSEERVIIIYSSPT 182
+P + RILC S IG VIG++G V+ + ++T A+I V + S ER+I+I S
Sbjct: 63 EPEEFSIRILCASELIGPVIGRSGANVRQVEQQTGARIVVQELHKDASGERLIVISS--- 119
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
K+ +P +AL+ +H ++ + S+ E+ +T
Sbjct: 120 ----------------KEIPADPVSPTIEALILLHSKVSASKVSEPSESEPSGEHKLVT- 162
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
RL+VP+ VGC+LG+ G VI +R GA IRV P +E+VQ+SG P++A+
Sbjct: 163 RLVVPSKKVGCILGEGGKVITEMRRRIGAEIRVYSKADKPKYLSFNEELVQVSGSPDIAR 222
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
AL E+++ L +D G +F PPA + +P+R + +G
Sbjct: 223 EALTEIASRLRDRILRD----------GISSFDGPPADI----------FPSREFTQYGR 262
Query: 363 PSTPWMG 369
P P G
Sbjct: 263 PVNPPYG 269
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 57/104 (54%), Gaps = 9/104 (8%)
Query: 470 KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS 529
+ ++ + + + L +P+S + ++G GG + E+R+ + GAR+KL + PGS
Sbjct: 482 RAADVTGYSSSSVELRIPNSSLESVVGAGGVNLAEIRQ-------ISGARMKLLEARPGS 534
Query: 530 SECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPS-SYQNINP 572
SE I++I+G + + A Q F+ S QPS S++++ P
Sbjct: 535 SESIMEIQGMAHQVRVAQSLLQGFI-GANSQSAQPSQSFRDLYP 577
>gi|15229321|ref|NP_187112.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|6175183|gb|AAF04909.1|AC011437_24 putative RNA-binding protein [Arabidopsis thaliana]
gi|17979249|gb|AAL49941.1| AT3g04610/F7O18_9 [Arabidopsis thaliana]
gi|332640585|gb|AEE74106.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 577
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 107/188 (56%), Gaps = 22/188 (11%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +TV+R+L P++K+G +IG+ G+++K + EET+A+I + D PG+ ER +++
Sbjct: 184 PGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMV------- 236
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
S E + S+ P + D LL+VH RI+ D G AS S ++ RL
Sbjct: 237 ---------SGKEEPESSLPP---SMDGLLRVHMRIV--DGLDGEAS-QAPPPSKVSTRL 281
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP + G L+GK+G ++ ++ + +RVL ++ LP A+ D +V++ G+P RA
Sbjct: 282 LVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHRA 341
Query: 305 LYEVSTLL 312
L +++ L
Sbjct: 342 LELIASHL 349
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 8/132 (6%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E ++L A K+G +IG+ G +K++ +ET A I + D P + ER + S E +
Sbjct: 185 GETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPES 244
Query: 456 PRSQTIDAILQ--------LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
++D +L+ L + S+ ++TRLLVP+S+ G ++G+ G + ++
Sbjct: 245 SLPPSMDGLLRVHMRIVDGLDGEASQAPPPSKVSTRLLVPASQAGSLIGKQGGTVKAIQE 304
Query: 508 RTQADIRVVGAR 519
+ +RV+G+
Sbjct: 305 ASACIVRVLGSE 316
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIR 537
G R+LVP+ KVG I+G+ G VI ++ T+A R+K+ D PG++E V +
Sbjct: 185 GETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRA-------RIKILDGPPGTTERAVMVS 237
Query: 538 GSSE 541
G E
Sbjct: 238 GKEE 241
>gi|255541092|ref|XP_002511610.1| conserved hypothetical protein [Ricinus communis]
gi|223548790|gb|EEF50279.1| conserved hypothetical protein [Ricinus communis]
Length = 363
Score = 112 bits (280), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 95/332 (28%), Positives = 152/332 (45%), Gaps = 91/332 (27%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D ++RI+ PSR+IG VIGK G ++ +REET+A I +AD I EERVIII S
Sbjct: 70 DVIFRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIISS------- 122
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI------ 240
K+ D A++AL K+ I++ED + E+S +
Sbjct: 123 ---KESDCVVSD----------AENALKKIATLILKED-------ESPAESSKVVGAGHL 162
Query: 241 ---TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPC--AMNTDEMVQIS 295
T RLL+ + G L+G G I++LR+ +GA I VL ++LP C A +D +VQIS
Sbjct: 163 GANTIRLLIAGSQAGSLIGVSGQNIEKLRNSSGATITVLAPNQLPLCASAHESDRVVQIS 222
Query: 296 GKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPAR 355
G V +A+ E+ L +N PP + + P N +
Sbjct: 223 GDVPVVLKAVEEIGCQLREN---------------------PPKQVISISPTYNYATV-- 259
Query: 356 NSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF-SMKILCSAGKIGGVIG 414
P+ P++ P+ SA++ +++++ S +GG+IG
Sbjct: 260 ------RPTQPYV-----DPT------------------SADYVTLEMMVSETLVGGLIG 290
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
+ G N+ +++ E+GA I V + R I+
Sbjct: 291 RCGSNISRIRNESGAMIKVYGGKGEKKHRHIQ 322
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 65/130 (50%), Gaps = 12/130 (9%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG------L 453
+I+ + +IG VIGK G ++++++ET A+I + DA +ERVI S+ E
Sbjct: 73 FRIVVPSRQIGKVIGKVGCRIQKIREETKATIKIADAIARHEERVIIISSKESDCVVSDA 132
Query: 454 WNPRSQTIDAILQLQNKTSEFSEK------GTITTRLLVPSSKVGCILGQGGHVINEMRR 507
N + IL+ +E S+ G T RLL+ S+ G ++G G I ++R
Sbjct: 133 ENALKKIATLILKEDESPAESSKVVGAGHLGANTIRLLIAGSQAGSLIGVSGQNIEKLRN 192
Query: 508 RTQADIRVVG 517
+ A I V+
Sbjct: 193 SSGATITVLA 202
>gi|255557235|ref|XP_002519648.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223541065|gb|EEF42621.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 462
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 107/221 (48%), Gaps = 16/221 (7%)
Query: 96 NQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLRE 155
N+ +R G K + + GN+ YRILCP IG VIGK G ++ S+R+
Sbjct: 8 NRLQRDHHDGDNKNQKRRVNDKDERGNNDEL-VAYRILCPDEVIGSVIGKNGKVINSIRQ 66
Query: 156 ETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLK 215
ET+AK+ V D PG +RVI IY K +D + + +P CAAQDALL+
Sbjct: 67 ETRAKVKVVDPFPGPNDRVITIYC-------YVKKKEDVELDDEFHDHQPFCAAQDALLR 119
Query: 216 VHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
VH I + + D R+LVP++ ++GK G I++LRS+T A I+V
Sbjct: 120 VHSAI--SNAVSSVLDSDRKMKDKEECRILVPSSQSANIIGKAGTTIKKLRSKTRATIKV 177
Query: 276 LPADRLPP---CAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
P D P CAM+ D + P+ K E LL
Sbjct: 178 TPKDASDPTHSCAMDFDNFIM---SPDDLKSMAVEAILLLQ 215
Score = 104 bits (259), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/323 (27%), Positives = 154/323 (47%), Gaps = 38/323 (11%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
RIL PS + +IGKAG +K LR +T+A I V P S PT + +
Sbjct: 145 RILVPSSQSANIIGKAGTTIKKLRSKTRATIKVT---PKDA-------SDPTH-SCAMDF 193
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
D+ + +SM A +A+L + +I +ED + T++ RLLVP +
Sbjct: 194 DNFIMSPDDLKSM-----AVEAILLLQGKINDED------------DDTVSIRLLVPCKV 236
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+GC++GK G +I +R T A+IR+ + P CA ++DE+V++ G+ + AL ++
Sbjct: 237 IGCIIGKSGSIINEIRRRTKADIRISKGQK-PKCADSSDELVEVLGEVGSVRDALVQIVL 295
Query: 311 LLHQNPRKDKPPSSFPQA-----YGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST 365
L + K+K S P Y G + S P+ ++ + P+ ++ R + G+
Sbjct: 296 RLRDDALKEKDGSHNPSVGADPLYSGGSGISVPSLLSSVPPVTPLAYDQRPETGSGLGLL 355
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF----SMKILCSAGKIGGVIGKGGFNVK 421
YG MG +S ++ ++++L A +G V+GKGG N+
Sbjct: 356 SSSNLYGYGSLTMGDNGYDSMSSYSSSKLYGGLPPPSTLEMLVPANAVGKVLGKGGANIA 415
Query: 422 QLQQETGASIHVEDAPTDSDERV 444
+++ +GA I + DA + +R+
Sbjct: 416 NIRKISGAMIEISDAKSARGDRI 438
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 85/144 (59%), Gaps = 13/144 (9%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD-SDERVIRASAFEGLW----N 455
+IL + + +IGK G +K+L+ +T A+I V P D SD A F+ +
Sbjct: 145 RILVPSSQSANIIGKAGTTIKKLRSKTRATIKV--TPKDASDPTHSCAMDFDNFIMSPDD 202
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+S ++AIL LQ K ++ + T++ RLLVP +GCI+G+ G +INE+RRRT+ADIR+
Sbjct: 203 LKSMAVEAILLLQGKIND-EDDDTVSIRLLVPCKVIGCIIGKSGSIINEIRRRTKADIRI 261
Query: 516 V-GARVKLQDPHPGSSECIVDIRG 538
G + K D SS+ +V++ G
Sbjct: 262 SKGQKPKCAD----SSDELVEVLG 281
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 65/139 (46%), Gaps = 21/139 (15%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF----EGL 453
+ +ILC IG VIGK G + ++QET A + V D ++RVI + E +
Sbjct: 39 VAYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVVDPFPGPNDRVITIYCYVKKKEDV 98
Query: 454 --------WNPRSQTIDAILQLQNKT---------SEFSEKGTITTRLLVPSSKVGCILG 496
P DA+L++ + S+ K R+LVPSS+ I+G
Sbjct: 99 ELDDEFHDHQPFCAAQDALLRVHSAISNAVSSVLDSDRKMKDKEECRILVPSSQSANIIG 158
Query: 497 QGGHVINEMRRRTQADIRV 515
+ G I ++R +T+A I+V
Sbjct: 159 KAGTTIKKLRSKTRATIKV 177
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 41/73 (56%), Gaps = 11/73 (15%)
Query: 468 QNKTSEFSEKGT----ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ 523
+ + ++ E+G + R+L P +G ++G+ G VIN +R+ T+A ++VV
Sbjct: 23 KRRVNDKDERGNNDELVAYRILCPDEVIGSVIGKNGKVINSIRQETRAKVKVV------- 75
Query: 524 DPHPGSSECIVDI 536
DP PG ++ ++ I
Sbjct: 76 DPFPGPNDRVITI 88
>gi|148907101|gb|ABR16694.1| unknown [Picea sitchensis]
Length = 490
Score = 111 bits (278), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 98/345 (28%), Positives = 159/345 (46%), Gaps = 69/345 (20%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P + V+R+L PS+K+GG+IG+ G VK + EET+++I + D + G+ ERV+++
Sbjct: 47 PGENVFRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMV------- 99
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE-DLFGGMASDDDNENSTITAR 243
SA E ++ P A D +LKVH RIIE D G + TIT R
Sbjct: 100 ---------SAKEEPDATISP---AMDGILKVHKRIIEGIDEVG--RTQQAAGGPTIT-R 144
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
LL+ G L+GK+G I+ ++ +G +V+ ++ +P CA+ D++++I G+P +
Sbjct: 145 LLLAGIQSGSLIGKQGATIKSIQENSGVAAKVVGSEDIPYCALADDKVLEIQGEPANVHK 204
Query: 304 AL-------------------YEVS-----------TLLHQNPRKDKPPSSFPQA---YG 330
AL YE++ L HQ P SS P + +G
Sbjct: 205 ALELVVSHLRKFLVDRSVLPMYEMNMSKTNQSQMEQNLSHQ-PWSHNQTSSLPNSGSGFG 263
Query: 331 GQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQ 390
+ ++P AP D + S P S HG + YG P +G S+ + P
Sbjct: 264 NNSKYTPTAPPHDNY-YAPSDLPPETHSHHG------LNMYGRDP--LGGHSVPNAAP-- 312
Query: 391 MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
V + S ++ VIG G N+ ++ +GA I +E+
Sbjct: 313 -APVITQVSQRMQIPLSYADAVIGTNGANISYCRRNSGAIITIEE 356
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 67/133 (50%), Gaps = 9/133 (6%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E ++L + K+GG+IG+ G VK++ +ET + I + D + + ERV+ SA E
Sbjct: 48 GENVFRMLVPSQKVGGIIGRKGEFVKKMCEETRSRIKILDGLSGTPERVVMVSAKEEPDA 107
Query: 456 PRSQTIDAILQLQNKTSEFSEK---------GTITTRLLVPSSKVGCILGQGGHVINEMR 506
S +D IL++ + E ++ G TRLL+ + G ++G+ G I ++
Sbjct: 108 TISPAMDGILKVHKRIIEGIDEVGRTQQAAGGPTITRLLLAGIQSGSLIGKQGATIKSIQ 167
Query: 507 RRTQADIRVVGAR 519
+ +VVG+
Sbjct: 168 ENSGVAAKVVGSE 180
>gi|147855522|emb|CAN83854.1| hypothetical protein VITISV_031103 [Vitis vinifera]
Length = 321
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 117/233 (50%), Gaps = 42/233 (18%)
Query: 92 KRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVK 151
KRP + GV+ G ++ R ++ D ++RI+ PSR+IG VIGK G+ ++
Sbjct: 27 KRPRDD--DGGVIASATGEVADDHRSPKR-RAKNQDVLFRIVVPSRQIGKVIGKEGSRIQ 83
Query: 152 SLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQD 211
+REET+A I +AD I EERVIII S K+S A++
Sbjct: 84 KIREETKATIKIADAIARHEERVIIISS--------------------KDSENVISDAEN 123
Query: 212 ALLKVHDRIIEEDLFGGMASDDDNENSTITA---------RLLVPNNMVGCLLGKRGDVI 262
ALL+ I++E DD N ++ RLL+ + GCL+G G I
Sbjct: 124 ALLQXASLILKE--------DDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSGQNI 175
Query: 263 QRLRSETGANIRVLPADRLPPC--AMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++LR+ +GA I +LP ++LP C A ++D MVQISG +AL E+ L
Sbjct: 176 EKLRNSSGATITILPQNQLPLCASAHDSDRMVQISGDVPAVLKALEEIGCQLR 228
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 64/127 (50%), Gaps = 11/127 (8%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA------FEGLW 454
+I+ + +IG VIGK G ++++++ET A+I + DA +ERVI S+
Sbjct: 63 RIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKDSENVISDAE 122
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGT-----ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
N Q IL+ + ++ + G RLL+ S+ GC++G G I ++R +
Sbjct: 123 NALLQXASLILKEDDSNTDALKVGVGHVVANAIRLLIAGSQAGCLIGMSGQNIEKLRNSS 182
Query: 510 QADIRVV 516
A I ++
Sbjct: 183 GATITIL 189
>gi|224079280|ref|XP_002305814.1| predicted protein [Populus trichocarpa]
gi|222848778|gb|EEE86325.1| predicted protein [Populus trichocarpa]
Length = 270
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/67 (83%), Positives = 59/67 (88%), Gaps = 2/67 (2%)
Query: 449 AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
F+GLWNPRSQTI+AILQLQNKTSEFSEKG I TRLLVPSSKVGCILGQG INEM RR
Sbjct: 52 VFQGLWNPRSQTIEAILQLQNKTSEFSEKGMI-TRLLVPSSKVGCILGQGSQDINEM-RR 109
Query: 509 TQADIRV 515
QA+IRV
Sbjct: 110 LQAEIRV 116
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ RLLVP++ VGC+LG+ I +R A IRV P + P CA +E+VQ + PN
Sbjct: 82 MITRLLVPSSKVGCILGQGSQDINEMR-RLQAEIRVYPKNEKPKCASEDEELVQANNSPN 140
Query: 300 V 300
+
Sbjct: 141 M 141
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 48/103 (46%), Gaps = 31/103 (30%)
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQ 568
T + IR +V+ H GS E V+ GSSEHL +A Y++FM+SG
Sbjct: 190 TASTIRCWN-KVEAFTSHYGSYE--VENHGSSEHLTAAQCLYRAFMSSGG---------- 236
Query: 569 NINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNIN 611
Q M+SHQ SYQ V +QQS YQ++N
Sbjct: 237 ---------QNMNSHQGSYQT---------SVTSQQSSYQSMN 261
>gi|297833144|ref|XP_002884454.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
gi|297330294|gb|EFH60713.1| hypothetical protein ARALYDRAFT_477721 [Arabidopsis lyrata subsp.
lyrata]
Length = 568
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 106/188 (56%), Gaps = 22/188 (11%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +TV+R+L P++K+G +IG+ G+++K + EET+A+I + D PG+ ER +++
Sbjct: 175 PGETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMV------- 227
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
S E + S+ P + D LL+VH RI+ D G S S ++ RL
Sbjct: 228 ---------SGKEEPESSLPP---SMDGLLRVHMRIV--DGLDGEPS-QAPPASKVSTRL 272
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP + G L+GK+G ++ ++ + +RVL ++ LP A+ D +V++ G+P +A
Sbjct: 273 LVPASQAGSLIGKQGGTVKAIQEASACIVRVLGSEDLPVFALQDDRVVEVVGEPTSVHKA 332
Query: 305 LYEVSTLL 312
L +++ L
Sbjct: 333 LELIASHL 340
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 69/132 (52%), Gaps = 8/132 (6%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E ++L A K+G +IG+ G +K++ +ET A I + D P + ER + S E +
Sbjct: 176 GETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRARIKILDGPPGTTERAVMVSGKEEPES 235
Query: 456 PRSQTIDAILQ--------LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
++D +L+ L + S+ ++TRLLVP+S+ G ++G+ G + ++
Sbjct: 236 SLPPSMDGLLRVHMRIVDGLDGEPSQAPPASKVSTRLLVPASQAGSLIGKQGGTVKAIQE 295
Query: 508 RTQADIRVVGAR 519
+ +RV+G+
Sbjct: 296 ASACIVRVLGSE 307
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 7/64 (10%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIR 537
G R+LVP+ KVG I+G+ G VI ++ T+A R+K+ D PG++E V +
Sbjct: 176 GETVFRMLVPAQKVGSIIGRKGDVIKKIVEETRA-------RIKILDGPPGTTERAVMVS 228
Query: 538 GSSE 541
G E
Sbjct: 229 GKEE 232
>gi|226497902|ref|NP_001151605.1| nucleic acid binding protein [Zea mays]
gi|195648058|gb|ACG43497.1| nucleic acid binding protein [Zea mays]
Length = 524
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 111/209 (53%), Gaps = 24/209 (11%)
Query: 107 KKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT 166
++GN ++ + + P ++V+RIL P++K+G +IG+ G +K + EET+A+I + D
Sbjct: 100 QQGNLQVNNVDDNIWPGWPGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDG 159
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
PG ER ++I K E P A D LL+VH RI D
Sbjct: 160 PPGVPERAVMI-------------------SAKDEPDAPLSPAMDGLLRVHKRIT--DSS 198
Query: 227 GGMASDDDNENSTI-TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCA 285
G +S I RLLVP++ G L+GK+G I+ ++ + + +R++ + +PP A
Sbjct: 199 DGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSIQDSSKSIVRIV--ENVPPVA 256
Query: 286 MNTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+N D +V+I G+P ++A+ +S+ L +
Sbjct: 257 LNDDRVVEIQGEPLGVQKAVELISSHLRK 285
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 24/170 (14%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E +IL A K+G +IG+ G +K++ +ET A I + D P ER + SA +
Sbjct: 119 GESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDA 178
Query: 456 PRSQTIDAILQLQNKTSEFSE---------KGTI-TTRLLVPSSKVGCILGQGGHVINEM 505
P S +D +L++ + ++ S+ G I TRLLVPSS+ G ++G+ G I +
Sbjct: 179 PLSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSI 238
Query: 506 RRRTQADIRVVG--ARVKLQDPHPGSSECIVDIRGS------SEHLISAH 547
+ +++ +R+V V L D + +V+I+G + LIS+H
Sbjct: 239 QDSSKSIVRIVENVPPVALND------DRVVEIQGEPLGVQKAVELISSH 282
>gi|356573119|ref|XP_003554712.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Glycine max]
Length = 446
Score = 109 bits (273), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 62/194 (31%), Positives = 108/194 (55%), Gaps = 28/194 (14%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+R+L P++K+GG+IG+ G +K + EET+A++ + D PG+ +R ++I
Sbjct: 44 PGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMI------- 96
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS----TI 240
SA E S+ P A D LL+VH RII+ G+ SD + S +
Sbjct: 97 ---------SAKEEPGSSVPP---AVDGLLRVHKRIID-----GLESDFTHAPSGVAGKV 139
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
+ +LLVP + G L+GK+G ++ ++ + +RVL A+ LP A+ D +V++ G P
Sbjct: 140 STKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPTG 199
Query: 301 AKRALYEVSTLLHQ 314
+AL +++ L +
Sbjct: 200 VHKALELIASHLRK 213
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 76/142 (53%), Gaps = 14/142 (9%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
E ++L A K+GG+IG+ G +K++ +ET A + + D P + +R + SA E +
Sbjct: 46 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSS 105
Query: 457 RSQTIDAILQLQNKT-----SEFSE-----KGTITTRLLVPSSKVGCILGQGGHVINEMR 506
+D +L++ + S+F+ G ++T+LLVP+S+ G ++G+ G + ++
Sbjct: 106 VPPAVDGLLRVHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 165
Query: 507 RRTQADIRVVGAR----VKLQD 524
+ +RV+GA LQD
Sbjct: 166 EASNCIVRVLGAEDLPIFALQD 187
>gi|413933627|gb|AFW68178.1| nucleic acid binding protein [Zea mays]
Length = 637
Score = 109 bits (272), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 94/351 (26%), Positives = 151/351 (43%), Gaps = 74/351 (21%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+RIL P++K+G +IG+ G +K + EET+A+I + D PG ER ++I
Sbjct: 228 PGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMI------- 280
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI-TAR 243
K E P A D LL+VH RI D G +S I R
Sbjct: 281 ------------SAKDEPDAPLSPAMDGLLRVHKRIT--DSSDGESSQPQRSAGNIGPTR 326
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
LLVP++ G L+GK+G I+ ++ + + +R++ + +PP A+N D +V+I G+P +
Sbjct: 327 LLVPSSQAGSLIGKQGATIKSIQDSSKSIVRIV--ENVPPVALNDDRVVEIQGEPLGVQE 384
Query: 304 A-------------------LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMAD- 343
A L+E +H PR+ P PQ +G PP
Sbjct: 385 AVELISSHLRKFLVDRSVLPLFEAHMKMHGMPREQPVPP--PQHWG------PPQTWIRP 436
Query: 344 ----------------MHPLGNSSWPARNSSLHGMPSTPWMG--GYGDQPSRMGSGSINS 385
MHP S+ H M P G YG + G+ + +
Sbjct: 437 PNIPPGGPGFGGNPQFMHPRPQDSYYPSPDVPH-MEKQPHYGISAYGREAPPSGASATGN 495
Query: 386 CPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 436
PP G A L A VIG G ++ +++ +GA++ ++++
Sbjct: 496 QPPSHAGSQVAHDMHIPLAYA---DAVIGAAGASISYIRRHSGATVTIQES 543
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 87/170 (51%), Gaps = 24/170 (14%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E +IL A K+G +IG+ G +K++ +ET A I + D P ER + SA +
Sbjct: 229 GESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDA 288
Query: 456 PRSQTIDAILQLQNKTSEFSE---------KGTI-TTRLLVPSSKVGCILGQGGHVINEM 505
P S +D +L++ + ++ S+ G I TRLLVPSS+ G ++G+ G I +
Sbjct: 289 PLSPAMDGLLRVHKRITDSSDGESSQPQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSI 348
Query: 506 RRRTQADIRVVG--ARVKLQDPHPGSSECIVDIRG------SSEHLISAH 547
+ +++ +R+V V L D + +V+I+G + LIS+H
Sbjct: 349 QDSSKSIVRIVENVPPVALND------DRVVEIQGEPLGVQEAVELISSH 392
>gi|42573788|ref|NP_974990.1| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010500|gb|AED97883.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 824
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 36/193 (18%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D V++ILC + GGVIG G +V+ L ET A I V +T+ EER+I + +S
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASEN---- 506
Query: 187 TQNKDDDSAAETKKESMEPHCA---AQDALLKVHDRIIEEDLFGGMASD---DDNENSTI 240
P C AQ A++ + R+ E +A++ D+ S+I
Sbjct: 507 ------------------PECQSSPAQKAIMLIFSRLFE------LATNKILDNGPRSSI 542
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK-PN 299
TARL+VP + +GC+LGK G ++ +R TGA I++L ++ P C D++VQI+G+ PN
Sbjct: 543 TARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPN 602
Query: 300 VAKRALYEVSTLL 312
V + A++ +++ L
Sbjct: 603 V-REAIFHITSRL 614
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ- 188
+R+LCP +G VIGK+GN++K L++ T AKI V + GS +RVI I + ++ +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 189 -NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
++ +A KKE AQ AL+KV F +A++ D++ T+ RLL
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKV---------FELLAAEADSD--TVVCRLLTE 157
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
++ G ++GK G ++ +R ETG I + + LP CA DEMV++ G K+AL
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKISIR-IENLPICADTDDEMVEVEGNAIAVKKALVS 216
Query: 308 VSTLLHQNPRKDK 320
+S L DK
Sbjct: 217 ISRCLQNCQSIDK 229
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 37/270 (13%)
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
PP ++ + + KILCS GGVIG GG V+ L ETGA I+V + D +ER+I
Sbjct: 441 PPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIA 500
Query: 447 ASAFEGLWNPRSQTIDA----------ILQL-QNKTSEFSEKGTITTRLLVPSSKVGCIL 495
+A E NP Q+ A + +L NK + + +IT RL+VP+S++GC+L
Sbjct: 501 VTASE---NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVL 557
Query: 496 GQGGHVINEMRRRTQADIRVVGAR------------VKLQDPHPGSSECIVDIRGSSEHL 543
G+GG +++EMR+ T A I+++ V++ P E I I
Sbjct: 558 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
Query: 544 ISAHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQ 603
+ ++ S S ++ + + + Q + ++ SHQ S N T S HR
Sbjct: 618 VFSNSMKNSLAKSSSALTTE----RFYDRQSDNPLSIGSHQ-SVSNPATNSSSLHR---- 668
Query: 604 QSPYQNINPQQSSYPMHTHQGAGTNPHITP 633
+S ++ SS ++ + GT+P+I P
Sbjct: 669 RSEDSFLSGSHSS--VNYSRSVGTDPYIRP 696
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 21/138 (15%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI--------RASAF 450
+ ++LC +G VIGK G +KQLQQ TGA I VE+ P+ S +RVI ++
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 451 EGLWN-------------PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQ 497
G N S+ A++++ + ++ T+ RLL SS G ++G+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGK 167
Query: 498 GGHVINEMRRRTQADIRV 515
GG ++ +R+ T I +
Sbjct: 168 GGQMVGSIRKETGCKISI 185
Score = 38.9 bits (89), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDI 536
G RLL P S VG ++G+ G+VI ++++ T GA++++++P GS + ++ I
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQST-------GAKIRVEEPPSGSPDRVITI 96
>gi|9759415|dbj|BAB09870.1| unnamed protein product [Arabidopsis thaliana]
Length = 833
Score = 108 bits (271), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 36/193 (18%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D V++ILC + GGVIG G +V+ L ET A I V +T+ EER+I + +S
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASEN---- 506
Query: 187 TQNKDDDSAAETKKESMEPHCA---AQDALLKVHDRIIEEDLFGGMASD---DDNENSTI 240
P C AQ A++ + R+ E +A++ D+ S+I
Sbjct: 507 ------------------PECQSSPAQKAIMLIFSRLFE------LATNKILDNGPRSSI 542
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK-PN 299
TARL+VP + +GC+LGK G ++ +R TGA I++L ++ P C D++VQI+G+ PN
Sbjct: 543 TARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPN 602
Query: 300 VAKRALYEVSTLL 312
V + A++ +++ L
Sbjct: 603 V-REAIFHITSRL 614
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ- 188
+R+LCP +G VIGK+GN++K L++ T AKI V + GS +RVI I + ++ +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 189 -NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
++ +A KKE AQ AL+KV F +A++ D++ T+ RLL
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKV---------FELLAAEADSD--TVVCRLLTE 157
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
++ G ++GK G ++ +R ETG I + + LP CA DEMV++ G K+AL
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKISIR-IENLPICADTDDEMVEVEGNAIAVKKALVS 216
Query: 308 VSTLLHQNPRKDK 320
+S L DK
Sbjct: 217 ISRCLQNCQSIDK 229
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 37/270 (13%)
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
PP ++ + + KILCS GGVIG GG V+ L ETGA I+V + D +ER+I
Sbjct: 441 PPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIA 500
Query: 447 ASAFEGLWNPRSQTIDA----------ILQL-QNKTSEFSEKGTITTRLLVPSSKVGCIL 495
+A E NP Q+ A + +L NK + + +IT RL+VP+S++GC+L
Sbjct: 501 VTASE---NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVL 557
Query: 496 GQGGHVINEMRRRTQADIRVVGAR------------VKLQDPHPGSSECIVDIRGSSEHL 543
G+GG +++EMR+ T A I+++ V++ P E I I
Sbjct: 558 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
Query: 544 ISAHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQ 603
+ ++ S S ++ + + + Q + ++ SHQ S N T S HR
Sbjct: 618 VFSNSMKNSLAKSSSALTTE----RFYDRQSDNPLSIGSHQ-SVSNPATNSSSLHR---- 668
Query: 604 QSPYQNINPQQSSYPMHTHQGAGTNPHITP 633
+S ++ SS ++ + GT+P+I P
Sbjct: 669 RSEDSFLSGSHSS--VNYSRSVGTDPYIRP 696
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 21/138 (15%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI--------RASAF 450
+ ++LC +G VIGK G +KQLQQ TGA I VE+ P+ S +RVI ++
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 451 EGLWN-------------PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQ 497
G N S+ A++++ + ++ T+ RLL SS G ++G+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGK 167
Query: 498 GGHVINEMRRRTQADIRV 515
GG ++ +R+ T I +
Sbjct: 168 GGQMVGSIRKETGCKISI 185
Score = 38.9 bits (89), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDI 536
G RLL P S VG ++G+ G+VI ++++ T GA++++++P GS + ++ I
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQST-------GAKIRVEEPPSGSPDRVITI 96
>gi|356505941|ref|XP_003521747.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 108/194 (55%), Gaps = 28/194 (14%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+R+L P++K+GG+IG+ G +K + EET+A++ + D PG+ +R ++I
Sbjct: 41 PGESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMI------- 93
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS----TI 240
SA E S+ P A D LL++H RII+ G+ SD + S +
Sbjct: 94 ---------SAKEEPGSSVPP---AVDGLLRIHKRIID-----GLESDFTHAPSGVAGKV 136
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
+ +LLVP + G L+GK+G ++ ++ + +RVL A+ LP A+ D +V++ G P
Sbjct: 137 STKLLVPASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGDPAG 196
Query: 301 AKRALYEVSTLLHQ 314
+AL +++ L +
Sbjct: 197 VHKALELIASHLRK 210
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 102/209 (48%), Gaps = 30/209 (14%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
E ++L A K+GG+IG+ G +K++ +ET A + + D P + +R + SA E +
Sbjct: 43 ESVFRMLVPAQKVGGIIGRKGEFIKKIVEETRARVKILDGPPGTVQRAVMISAKEEPGSS 102
Query: 457 RSQTIDAILQLQNKT-----SEFSE-----KGTITTRLLVPSSKVGCILGQGGHVINEMR 506
+D +L++ + S+F+ G ++T+LLVP+S+ G ++G+ G + ++
Sbjct: 103 VPPAVDGLLRIHKRIIDGLESDFTHAPSGVAGKVSTKLLVPASQAGSLIGKQGGTVKSIQ 162
Query: 507 RRTQADIRVVGAR----VKLQDPHPGSSECIVDIRGS------SEHLISAHGTYQSFMTS 556
+ +RV+GA LQD + +V++ G + LI++H + F+
Sbjct: 163 EASNCIVRVLGAEDLPIFALQD------DRVVEVVGDPAGVHKALELIASH--LRKFLVD 214
Query: 557 GQSMKVQPSSYQNINPQQSSCQTMSSHQS 585
+ + + Q NP + M HQS
Sbjct: 215 RGVIPIFEMNMQTANPHH--AEHMPPHQS 241
>gi|22328051|ref|NP_201244.2| HEN4 isoform 2 [Arabidopsis thaliana]
gi|332010501|gb|AED97884.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 857
Score = 108 bits (270), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 105/193 (54%), Gaps = 36/193 (18%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D V++ILC + GGVIG G +V+ L ET A I V +T+ EER+I + +S
Sbjct: 451 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIAVTASEN---- 506
Query: 187 TQNKDDDSAAETKKESMEPHCA---AQDALLKVHDRIIEEDLFGGMASD---DDNENSTI 240
P C AQ A++ + R+ E +A++ D+ S+I
Sbjct: 507 ------------------PECQSSPAQKAIMLIFSRLFE------LATNKILDNGPRSSI 542
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK-PN 299
TARL+VP + +GC+LGK G ++ +R TGA I++L ++ P C D++VQI+G+ PN
Sbjct: 543 TARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPN 602
Query: 300 VAKRALYEVSTLL 312
V + A++ +++ L
Sbjct: 603 V-REAIFHITSRL 614
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ- 188
+R+LCP +G VIGK+GN++K L++ T AKI V + GS +RVI I + ++ +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 189 -NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
++ +A KKE AQ AL+KV F +A++ D++ T+ RLL
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKV---------FELLAAEADSD--TVVCRLLTE 157
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
++ G ++GK G ++ +R ETG I + + LP CA DEMV++ G K+AL
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKISIR-IENLPICADTDDEMVEVEGNAIAVKKALVS 216
Query: 308 VSTLLHQNPRKDK 320
+S L DK
Sbjct: 217 ISRCLQNCQSIDK 229
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 129/270 (47%), Gaps = 37/270 (13%)
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
PP ++ + + KILCS GGVIG GG V+ L ETGA I+V + D +ER+I
Sbjct: 441 PPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNTLDDCEERLIA 500
Query: 447 ASAFEGLWNPRSQTIDA----------ILQL-QNKTSEFSEKGTITTRLLVPSSKVGCIL 495
+A E NP Q+ A + +L NK + + +IT RL+VP+S++GC+L
Sbjct: 501 VTASE---NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVL 557
Query: 496 GQGGHVINEMRRRTQADIRVVGAR------------VKLQDPHPGSSECIVDIRGSSEHL 543
G+GG +++EMR+ T A I+++ V++ P E I I
Sbjct: 558 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITGEFPNVREAIFHITSRLRDS 617
Query: 544 ISAHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQ 603
+ ++ S S ++ + + + Q + ++ SHQ S N T S HR
Sbjct: 618 VFSNSMKNSLAKSSSALTTE----RFYDRQSDNPLSIGSHQ-SVSNPATNSSSLHR---- 668
Query: 604 QSPYQNINPQQSSYPMHTHQGAGTNPHITP 633
+S ++ SS ++ + GT+P+I P
Sbjct: 669 RSEDSFLSGSHSS--VNYSRSVGTDPYIRP 696
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 21/138 (15%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI--------RASAF 450
+ ++LC +G VIGK G +KQLQQ TGA I VE+ P+ S +RVI ++
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 451 EGLWN-------------PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQ 497
G N S+ A++++ + ++ T+ RLL SS G ++G+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGK 167
Query: 498 GGHVINEMRRRTQADIRV 515
GG ++ +R+ T I +
Sbjct: 168 GGQMVGSIRKETGCKISI 185
>gi|326505208|dbj|BAK02991.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 513
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 172/403 (42%), Gaps = 97/403 (24%)
Query: 88 NFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSF-----GNSQ-----PADTVYRILCPSR 137
N + P Q+ + V ++ N N +Q G + P D+V+RIL P++
Sbjct: 64 NLLSEEPETQYNDEPVSPCQEENAYNGQVKQQESLQVEGEDKRWPGWPGDSVFRILVPAQ 123
Query: 138 KIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAE 197
K+G +IG+ G +K + E+++A+I + D PG ER +II +
Sbjct: 124 KVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAVIISA------------------ 165
Query: 198 TKKESMEPHCAAQDALLKVHDRIIE--EDLFGGMASDDDNENSTITARLLVPNNMVGCLL 255
K E EP A D LL++H RI + + FG N T RLLVP + G L+
Sbjct: 166 -KDEPDEPISPAMDGLLRIHKRITDGSDGEFGQPQRGASNVGPT---RLLVPASQAGSLI 221
Query: 256 GKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA----------- 304
GK+G I+ ++ + + +R++ + +PP A+N D +V+I G+P +A
Sbjct: 222 GKQGATIKSIQDSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVHKAVELIANHLRKF 279
Query: 305 --------LYEVSTLLHQNPRKDKPPSSFPQ-------------------AYGGQNFHSP 337
L+E +H R+ P + PQ YGG P
Sbjct: 280 LVDHSVLPLFEQQMKMHSVQREQ--PMTAPQHWTPTQPWLPPPNLPPVGPGYGGNPQFMP 337
Query: 338 PAPMADMHPLGN----SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGE 393
P P + +P + P S +G + P SG+ + PP +
Sbjct: 338 PRPQDNYYPRPDVPPMEKQPHYGISAYGREAPP-------------SGTSGNQPP--LHV 382
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 436
S +M+I S VIG G ++ +++++GA++ ++++
Sbjct: 383 ASQVHNMQIPLSYAD--AVIGAAGASISYIRRQSGAAVTIQES 423
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 70/127 (55%), Gaps = 10/127 (7%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+IL A K+G +IG+ G +K++ +++ A I + D P ER + SA + P S
Sbjct: 116 FRILVPAQKVGAIIGRKGEFIKKMCEQSKARIKILDGPPGVTERAVIISAKDEPDEPISP 175
Query: 460 TIDAILQLQNKTSEFSE-------KGTIT---TRLLVPSSKVGCILGQGGHVINEMRRRT 509
+D +L++ + ++ S+ +G TRLLVP+S+ G ++G+ G I ++ +
Sbjct: 176 AMDGLLRIHKRITDGSDGEFGQPQRGASNVGPTRLLVPASQAGSLIGKQGATIKSIQDSS 235
Query: 510 QADIRVV 516
++ +R+V
Sbjct: 236 KSVVRIV 242
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 7/64 (10%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIR 537
G R+LVP+ KVG I+G+ G I +M +++ AR+K+ D PG +E V I
Sbjct: 112 GDSVFRILVPAQKVGAIIGRKGEFIKKMCEQSK-------ARIKILDGPPGVTERAVIIS 164
Query: 538 GSSE 541
E
Sbjct: 165 AKDE 168
>gi|255561873|ref|XP_002521945.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223538749|gb|EEF40349.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 548
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 156/345 (45%), Gaps = 64/345 (18%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+R+L P++K+G +IG+ G +K + EET+A+I + D PG+ ER +++
Sbjct: 149 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMV------- 201
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
SA E ++ P A D LL+VH RI+ + L G + + ++ RL
Sbjct: 202 ---------SAKEEPDSALPP---AMDGLLRVHKRIV-DGLDGDSSHASSGTGTKVSTRL 248
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP + G L+GK+G ++ ++ + +RVL A+ LP A+ D +V++ G +A
Sbjct: 249 LVPASQAGSLIGKQGGTVKSIQEASSCVVRVLGAEDLPVFALQDDRVVEVLGDAAGVHKA 308
Query: 305 -------------------LYEVSTLLHQNPRKDK--------PPSSFP------QAYGG 331
L+E+ + P + PP P YG
Sbjct: 309 VELIASHLRKFLVDRSIIPLFEMHMQMQNPPHMEHMPPHQSWGPPQGIPPNAGGGPGYGN 368
Query: 332 QNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINS-CPPGQ 390
+ PP + + +P + P G+ + YG + GS NS P
Sbjct: 369 PQYMPPPRQIENYYPPADLPPPMEKQPHQGISA------YGREAPMGVHGSSNSQAAPSM 422
Query: 391 MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
+ +++ + M+I S VIG G ++ +++ +GA++ +++
Sbjct: 423 ITQITQQ--MQIPLSYAD--AVIGTAGTSISYIRRASGATVTIQE 463
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 77/150 (51%), Gaps = 14/150 (9%)
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
SG I PG GE ++L A K+G +IG+ G +K++ +ET A I + D P
Sbjct: 138 SGGIEKKWPGWPGE----SVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPG 193
Query: 440 SDERVIRASAFEGLWNPRSQTIDAILQLQNKT-------SEFSEKGT---ITTRLLVPSS 489
+ ER + SA E + +D +L++ + S + GT ++TRLLVP+S
Sbjct: 194 TTERAVMVSAKEEPDSALPPAMDGLLRVHKRIVDGLDGDSSHASSGTGTKVSTRLLVPAS 253
Query: 490 KVGCILGQGGHVINEMRRRTQADIRVVGAR 519
+ G ++G+ G + ++ + +RV+GA
Sbjct: 254 QAGSLIGKQGGTVKSIQEASSCVVRVLGAE 283
>gi|116784616|gb|ABK23409.1| unknown [Picea sitchensis]
Length = 407
Score = 107 bits (266), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 95/322 (29%), Positives = 151/322 (46%), Gaps = 64/322 (19%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D V+RI+ S KIG VIGK G+ + LRE+T A+I +AD + E+RVIII S + +
Sbjct: 92 DIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISSKGEEEEE 151
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI------ 240
T AA+ AL+++ I+EE S + + + +
Sbjct: 152 T-------------------SAAEQALIQIATVILEE-------SGESSATAKVGTRHVG 185
Query: 241 --TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPC--AMNTDEMVQISG 296
RLL+ + G L+G G I+ +R+++GA I++LP + P C A TD +VQISG
Sbjct: 186 PNMMRLLIAGSQAGSLIGASGKTIKEIRNDSGATIKILPQNLSPICASASETDRLVQISG 245
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN 356
+ + +AL + L ++P ++ S+ P Y G + PA
Sbjct: 246 EVSQVLKALDHIGVTLREHPPRE-VISTRPTYYAGLS----PA----------------- 283
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI-----GG 411
+ L +P T + GY Q + + G +SA F++ + KI GG
Sbjct: 284 NGLMVLPQT-VLPGYNMQTGNSNYSYLGAAGRAAGGTISAAFALPKVTVEMKIPSSVAGG 342
Query: 412 VIGKGGFNVKQLQQETGASIHV 433
VIGK G N+ Q++ +GA + V
Sbjct: 343 VIGKRGDNISQIRSLSGAIVKV 364
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 66/132 (50%), Gaps = 12/132 (9%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+ +I+ ++ KIG VIGK G + QL+++TGA I + D T ++RVI S+
Sbjct: 92 DIVFRIVVASNKIGKVIGKQGSKINQLREDTGARIKIADPVTPLEDRVIIISSKGEEEEE 151
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITT------------RLLVPSSKVGCILGQGGHVINE 504
S A++Q+ E S + + T RLL+ S+ G ++G G I E
Sbjct: 152 TSAAEQALIQIATVILEESGESSATAKVGTRHVGPNMMRLLIAGSQAGSLIGASGKTIKE 211
Query: 505 MRRRTQADIRVV 516
+R + A I+++
Sbjct: 212 IRNDSGATIKIL 223
>gi|225463940|ref|XP_002269249.1| PREDICTED: poly(rC)-binding protein 3-like [Vitis vinifera]
Length = 442
Score = 106 bits (265), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 105/192 (54%), Gaps = 26/192 (13%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+R+L P++K+G +IG+ G +K + EET+A+I + D PG+ ER +++
Sbjct: 45 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV------- 97
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN--ENSTITA 242
SA E S+ P A D LLKVH RI++ G+ D + ++
Sbjct: 98 ---------SAKEEPDSSLPP---AMDGLLKVHKRIVD-----GLEGDSSHMPPGGKVST 140
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
RLLV + G L+GK+G ++ ++ + +RVL A+ LP A+ D +V++ G+P
Sbjct: 141 RLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVH 200
Query: 303 RALYEVSTLLHQ 314
+A+ +++ L +
Sbjct: 201 KAVELIASHLRK 212
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 68/135 (50%), Gaps = 14/135 (10%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE---- 451
E ++L A K+G +IG+ G +K++ +ET A I + D P + ER + SA E
Sbjct: 46 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDS 105
Query: 452 -------GLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINE 504
GL + +D L+ +S G ++TRLLV +S+ G ++G+ G +
Sbjct: 106 SLPPAMDGLLKVHKRIVDG---LEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKS 162
Query: 505 MRRRTQADIRVVGAR 519
++ + +RV+GA
Sbjct: 163 IQEASNCIVRVLGAE 177
>gi|296087899|emb|CBI35182.3| unnamed protein product [Vitis vinifera]
Length = 511
Score = 106 bits (265), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 105/192 (54%), Gaps = 26/192 (13%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+R+L P++K+G +IG+ G +K + EET+A+I + D PG+ ER +++
Sbjct: 114 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV------- 166
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN--ENSTITA 242
SA E S+ P A D LLKVH RI++ G+ D + ++
Sbjct: 167 ---------SAKEEPDSSLPP---AMDGLLKVHKRIVD-----GLEGDSSHMPPGGKVST 209
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
RLLV + G L+GK+G ++ ++ + +RVL A+ LP A+ D +V++ G+P
Sbjct: 210 RLLVAASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVH 269
Query: 303 RALYEVSTLLHQ 314
+A+ +++ L +
Sbjct: 270 KAVELIASHLRK 281
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 18/144 (12%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS------- 448
E ++L A K+G +IG+ G +K++ +ET A I + D P + ER + S
Sbjct: 115 GESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDS 174
Query: 449 ----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINE 504
A +GL + +D L+ +S G ++TRLLV +S+ G ++G+ G +
Sbjct: 175 SLPPAMDGLLKVHKRIVDG---LEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKS 231
Query: 505 MRRRTQADIRVVGAR----VKLQD 524
++ + +RV+GA LQD
Sbjct: 232 IQEASNCIVRVLGAEDLPIFALQD 255
>gi|357121091|ref|XP_003562255.1| PREDICTED: poly(rC)-binding protein 1-like [Brachypodium
distachyon]
Length = 518
Score = 106 bits (264), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 106/443 (23%), Positives = 184/443 (41%), Gaps = 97/443 (21%)
Query: 88 NFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQ-----------PADTVYRILCPS 136
N + P NQ+ + ++ N N +Q N Q P D+V+RIL P
Sbjct: 64 NLLSEEPENQYNEEPAGPYQEENAFNGEVKQQ-DNLQVEANDKRWPGWPGDSVFRILVPV 122
Query: 137 RKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAA 196
K+G +IG+ G +K + EE++A+I + D PG ER ++I SA
Sbjct: 123 HKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPERAVMI----------------SAK 166
Query: 197 ETKKESMEPHCAAQDALLKVHDRIIE--EDLFGGMASDDDNENSTITARLLVPNNMVGCL 254
+ E + P A D LL++H RI + + FG T RLLVP + G L
Sbjct: 167 DEPDEQISP---AMDGLLRIHKRIADGSDGEFGQTQRGTGTMGPT---RLLVPASQAGSL 220
Query: 255 LGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA---------- 304
+GK+G I+ ++ + A +R++ + +PP A+N D +V+I G+P ++A
Sbjct: 221 IGKQGATIKSIQDSSKAVVRIV--ENVPPVALNDDRVVEIQGEPLSVQKAVELIASHLRK 278
Query: 305 ---------LYEVSTLLHQNPRKDKPPS-----------------SFPQAYGGQNFHSPP 338
L+E +H PR+ P+ Y G PP
Sbjct: 279 FLVDHSVLPLFEQQMKMHSMPREQPMPAPQQWGPPQPWGPPPNHPPGGPGYAGNPQFMPP 338
Query: 339 APMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF 398
P + +P + P +G + YG + S S N P V+++
Sbjct: 339 RPQDNYYPPPDVP-PMEKQPHYG------ISAYGREAPSGVSASGNQPP----SHVASQV 387
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED---APTDSDERVIRASAFEGLWN 455
+ + VIG G ++ +++ +GA++ +++ AP + + +I ++
Sbjct: 388 THNMQIPLSYADAVIGAAGASISYIRRHSGAAVTIQESRGAPGEMNVEIIGSA------- 440
Query: 456 PRSQTIDAILQLQNKTSEFSEKG 478
SQ A +QN +E + +G
Sbjct: 441 --SQVQTAQQLIQNFMAEAAPQG 461
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 86/166 (51%), Gaps = 24/166 (14%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+IL K+G +IG+ G +K++ +E+ A I + D P ER + SA + S
Sbjct: 116 FRILVPVHKVGAIIGRKGEFIKRMCEESKARIKILDGPPGVPERAVMISAKDEPDEQISP 175
Query: 460 TIDAILQLQNKTSEFSE-------KGTIT---TRLLVPSSKVGCILGQGGHVINEMRRRT 509
+D +L++ + ++ S+ +GT T TRLLVP+S+ G ++G+ G I ++ +
Sbjct: 176 AMDGLLRIHKRIADGSDGEFGQTQRGTGTMGPTRLLVPASQAGSLIGKQGATIKSIQDSS 235
Query: 510 QADIRVVG--ARVKLQDPHPGSSECIVDIRGS------SEHLISAH 547
+A +R+V V L D + +V+I+G + LI++H
Sbjct: 236 KAVVRIVENVPPVALND------DRVVEIQGEPLSVQKAVELIASH 275
>gi|449442959|ref|XP_004139248.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 483
Score = 105 bits (262), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+R+L P++K+G +IG+ G +K + EET+A+I + D PG+ ER +++
Sbjct: 82 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV------- 134
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
SA + + P A D LL+VH RI+ D G + N S ++ RL
Sbjct: 135 ---------SAKDEPDSAFPP---AVDGLLRVHKRIV--DGLEGDNAHAPNAGSKVSTRL 180
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LV + G L+GK+G ++ ++ E+ +RVL ++ LP A+ D +V++ G P +A
Sbjct: 181 LVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGVHKA 240
Query: 305 LYEVSTLLHQ 314
+ +++ L +
Sbjct: 241 VELIASHLRK 250
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 33/199 (16%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-------- 448
E ++L A K+G +IG+ G +K++ +ET A I + D P + ER + S
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 449 ---AFEGLWNPRSQTIDAILQLQNKTSEFSEKGT-ITTRLLVPSSKVGCILGQGGHVINE 504
A +GL + +D L+ + G+ ++TRLLV +S+ G ++G+ G +
Sbjct: 144 FPPAVDGLLRVHKRIVDG---LEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKS 200
Query: 505 MRRRTQADIRVVGAR----VKLQDPHPGSSECIVDIRGS------SEHLISAHGTYQSFM 554
++ + +RV+G+ LQD + +V++ G + LI++H + F+
Sbjct: 201 IQEESNCIVRVLGSEDLPVFALQD------DRVVEVLGDPAGVHKAVELIASH--LRKFL 252
Query: 555 TSGQSMKVQPSSYQNINPQ 573
+ V + Q NPQ
Sbjct: 253 VDRSIIPVFEMNMQMSNPQ 271
>gi|297794027|ref|XP_002864898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297310733|gb|EFH41157.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 865
Score = 105 bits (262), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 102/187 (54%), Gaps = 24/187 (12%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D V++ILC + GGVIG G +V+ L ET A I V +T+ EER+I +
Sbjct: 459 DVVFKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIAV--------- 509
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
+A E + P AQ A++ + R+ E D+ ++ITARL+V
Sbjct: 510 -------TAPENPECQSSP---AQKAIMLLFSRLFE---LSTKKILDNGPRTSITARLVV 556
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK-PNVAKRAL 305
P + +GC+LGK G ++ +R TGA I++L ++ P C D+++QI+G+ PNV + A+
Sbjct: 557 PTSQIGCVLGKGGVIVSEMRKTTGATIQILKVEQNPKCVSENDQVIQITGEFPNV-REAI 615
Query: 306 YEVSTLL 312
+ +++ L
Sbjct: 616 FHITSRL 622
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/193 (34%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ- 188
+R+LCP +G VIGK+GN++K L++ T AKI V + GS +RVI I + ++ +
Sbjct: 47 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVKL 106
Query: 189 -NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
++ +A KKE AQ AL+KV F +A++ D++ T+ RLL
Sbjct: 107 GVNNNGNAEGEKKEEEVEVSKAQGALIKV---------FELLAAEADSD--TVVCRLLTE 155
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
++ G ++GK G ++ +R ETG I + + LP CA DEMV+I G K+AL
Sbjct: 156 SSHAGAVIGKGGQMVGSIRKETGCKISIR-TENLPICADTDDEMVEIEGNAIAVKKALVS 214
Query: 308 VSTLLHQNPRKDK 320
+S L DK
Sbjct: 215 ISRCLQNCQSIDK 227
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/141 (39%), Positives = 84/141 (59%), Gaps = 14/141 (9%)
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
PP ++ + + KILCS GGVIG GG V+ L ETGA I+V + D +ER+I
Sbjct: 449 PPSEVEVGNQDVVFKILCSTENAGGVIGSGGKVVRMLHSETGAFINVGNTLADCEERLIA 508
Query: 447 ASAFEGLWNPRSQTI---DAILQLQNKTSEFSEKG--------TITTRLLVPSSKVGCIL 495
+A E NP Q+ AI+ L ++ E S K +IT RL+VP+S++GC+L
Sbjct: 509 VTAPE---NPECQSSPAQKAIMLLFSRLFELSTKKILDNGPRTSITARLVVPTSQIGCVL 565
Query: 496 GQGGHVINEMRRRTQADIRVV 516
G+GG +++EMR+ T A I+++
Sbjct: 566 GKGGVIVSEMRKTTGATIQIL 586
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 21/138 (15%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI--------RASAF 450
+ ++LC +G VIGK G +KQLQQ TGA I VE+ P S +RVI ++
Sbjct: 46 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPFGSPDRVITIIAQADSKSRVK 105
Query: 451 EGLWN-------------PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQ 497
G+ N S+ A++++ + ++ T+ RLL SS G ++G+
Sbjct: 106 LGVNNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGK 165
Query: 498 GGHVINEMRRRTQADIRV 515
GG ++ +R+ T I +
Sbjct: 166 GGQMVGSIRKETGCKISI 183
>gi|326488325|dbj|BAJ93831.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 520
Score = 104 bits (260), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 88/356 (24%), Positives = 161/356 (45%), Gaps = 84/356 (23%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+R+L ++K+G +IG+ G +K + +E++A+I + D PG ER ++I
Sbjct: 117 PGESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMI------- 169
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT--- 241
+A+ + +++ P A D LL+VH+RI + G+ S+ D +
Sbjct: 170 ----------SAKDEPDALVP--PAIDVLLRVHNRITD-----GLDSETDQAQKGASPAG 212
Query: 242 -ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
RLLVP + G L+GK+G I+ ++ + +R+L + +PP A+N D +V+I G+P+
Sbjct: 213 PTRLLVPASQAGSLIGKQGTTIKSIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPHD 270
Query: 301 AKRA-------------------LYEVSTLLHQNPRK-------------------DKPP 322
+A L+E+ +H PR+ + PP
Sbjct: 271 VHKAVELIANHLRKFLVDRSVLPLFEMQMKVHSAPREQPMPAPQQWGPPPPWSHPPNIPP 330
Query: 323 SSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMG--GYGDQPSRMGS 380
S YGG PP P +S +P N +H + P G YG + +
Sbjct: 331 SG--PGYGGNPHFMPPRPQ-------DSYYPPPN--VHHVEKQPHYGISSYGRDANPTAA 379
Query: 381 GSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 436
+ + + S++ S K+ VIG G N+ +++ +GA+I +++
Sbjct: 380 PTSGNQ---HLSHGSSQLSQKMQVPLSYADAVIGSAGANISYIRKHSGATISIQEG 432
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E ++L S K+G +IG+ G +K++ E+ A I + D P ER + SA +
Sbjct: 118 GESVFRVLVSTQKVGALIGRKGEFIKRMCDESKARIKILDGPPGVPERAVMISAKDEPDA 177
Query: 456 PRSQTIDAILQLQNKTSEF-------SEKGTI---TTRLLVPSSKVGCILGQGGHVINEM 505
ID +L++ N+ ++ ++KG TRLLVP+S+ G ++G+ G I +
Sbjct: 178 LVPPAIDVLLRVHNRITDGLDSETDQAQKGASPAGPTRLLVPASQAGSLIGKQGTTIKSI 237
Query: 506 RRRTQADIRVV 516
+ ++ +R++
Sbjct: 238 QDASKCALRIL 248
>gi|449531912|ref|XP_004172929.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 453
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 105/193 (54%), Gaps = 27/193 (13%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+R+L P++K+G +IG+ G +K + EET+A+I + D PG+ ER +++ +
Sbjct: 82 PGESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSA----- 136
Query: 185 AKTQNKDDDSAAETKKESMEPHCA---AQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
KD EP A A D LL+VH RI+ D G + N S ++
Sbjct: 137 -----KD------------EPDSAFPPAVDGLLRVHKRIV--DGLEGDNAHAPNAGSKVS 177
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
RLLV + G L+GK+G ++ ++ E+ +RVL ++ LP A+ D +V++ G P
Sbjct: 178 TRLLVAASQAGSLIGKQGGTVKSIQEESNCIVRVLGSEDLPVFALQDDRVVEVLGDPAGV 237
Query: 302 KRALYEVSTLLHQ 314
+A+ +++ L +
Sbjct: 238 HKAVELIASHLRK 250
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 33/199 (16%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA------- 449
E ++L A K+G +IG+ G +K++ +ET A I + D P + ER + SA
Sbjct: 84 ESVFRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKDEPDSA 143
Query: 450 ----FEGLWNPRSQTIDAILQLQNKTSEFSEKGT-ITTRLLVPSSKVGCILGQGGHVINE 504
+GL + +D L+ + G+ ++TRLLV +S+ G ++G+ G +
Sbjct: 144 FPPAVDGLLRVHKRIVDG---LEGDNAHAPNAGSKVSTRLLVAASQAGSLIGKQGGTVKS 200
Query: 505 MRRRTQADIRVVGAR----VKLQDPHPGSSECIVDIRGS------SEHLISAHGTYQSFM 554
++ + +RV+G+ LQD + +V++ G + LI++H + F+
Sbjct: 201 IQEESNCIVRVLGSEDLPVFALQD------DRVVEVLGDPAGVHKAVELIASH--LRKFL 252
Query: 555 TSGQSMKVQPSSYQNINPQ 573
+ V + Q NPQ
Sbjct: 253 VDRSIIPVFEMNMQMSNPQ 271
>gi|224137186|ref|XP_002327061.1| predicted protein [Populus trichocarpa]
gi|222835376|gb|EEE73811.1| predicted protein [Populus trichocarpa]
Length = 357
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 73/205 (35%), Positives = 107/205 (52%), Gaps = 34/205 (16%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
AD ++RI+ PS KIG VIGK G+ ++ +RE+T+A I +AD + EERVIII S
Sbjct: 49 ADVIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVIIISS------ 102
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL----------FGGMASDDDN 235
KE+ A++AL ++ + I+ ED G + +
Sbjct: 103 --------------KENENGATDAENALQRIAELILNEDDGGSSAGGGVEIGKLVNAGHV 148
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPC--AMNTDEMVQ 293
+TI RLL+ + G L+G G I +LR+ +GA I VL ++LP C A +D +VQ
Sbjct: 149 AANTI--RLLIAGSQAGSLIGMSGQNIVKLRNSSGAMITVLAPNQLPLCASAYESDRVVQ 206
Query: 294 ISGKPNVAKRALYEVSTLLHQNPRK 318
ISG V +AL E+ L +NP K
Sbjct: 207 ISGDVPVVLKALEEIGCQLRENPPK 231
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 18/140 (12%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG--- 452
A+ +I+ +GKIG VIGK G +++++++T A+I + DA +ERVI S+ E
Sbjct: 49 ADVIFRIVVPSGKIGKVIGKQGHRIQKIREDTKATIKIADAVARHEERVIIISSKENENG 108
Query: 453 ---LWNPRSQTIDAILQ---------LQNKTSEFSEKGTI---TTRLLVPSSKVGCILGQ 497
N + + IL + + G + T RLL+ S+ G ++G
Sbjct: 109 ATDAENALQRIAELILNEDDGGSSAGGGVEIGKLVNAGHVAANTIRLLIAGSQAGSLIGM 168
Query: 498 GGHVINEMRRRTQADIRVVG 517
G I ++R + A I V+
Sbjct: 169 SGQNIVKLRNSSGAMITVLA 188
>gi|28261405|gb|AAO37829.1| HEN4 isoform 2 [Arabidopsis thaliana]
Length = 836
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 36/193 (18%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D V++ILC + GGVIG G +V+ L ET A I V + + EER+I + +S
Sbjct: 463 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASEN---- 518
Query: 187 TQNKDDDSAAETKKESMEPHCA---AQDALLKVHDRIIEEDLFGGMASD---DDNENSTI 240
P C AQ A++ + R+ E +A++ D+ S+I
Sbjct: 519 ------------------PECQSSPAQKAIMLIFSRLFE------LATNKILDNGPRSSI 554
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK-PN 299
TARL+VP + +GC+LGK G ++ +R TGA I++L ++ P C D++VQI+ + PN
Sbjct: 555 TARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPN 614
Query: 300 VAKRALYEVSTLL 312
V + A++ +++ L
Sbjct: 615 V-REAIFHITSRL 626
Score = 99.0 bits (245), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ- 188
+R+LCP +G VIGK+GN++K L++ T AKI V + GS +RVI I + ++ +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 189 -NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
++ +A KKE AQ AL+KV F +A++ D++ T+ RLL
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKV---------FELLAAEADSD--TVVCRLLTE 157
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
++ G ++GK G ++ +R ETG I + + LP CA DEMV++ G K+AL
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKISIR-IENLPICADTDDEMVEVEGNAIAVKKALVS 216
Query: 308 VSTLLHQNPRKDK 320
+S L DK
Sbjct: 217 ISRCLQNCQSIDK 229
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 37/270 (13%)
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
PP ++ + + KILCS GGVIG GG V+ L ETGA I+V +A D +ER+I
Sbjct: 453 PPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIA 512
Query: 447 ASAFEGLWNPRSQTIDA----------ILQL-QNKTSEFSEKGTITTRLLVPSSKVGCIL 495
+A E NP Q+ A + +L NK + + +IT RL+VP+S++GC+L
Sbjct: 513 VTASE---NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVL 569
Query: 496 GQGGHVINEMRRRTQADIRVVGAR------------VKLQDPHPGSSECIVDIRGSSEHL 543
G+GG +++EMR+ T A I+++ V++ + P E I I
Sbjct: 570 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDS 629
Query: 544 ISAHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQ 603
+ ++ S S ++ + + + Q + ++ SHQ S N T S HR
Sbjct: 630 VFSNSMKNSLAKSSSALTTE----RFYDRQSDNPLSIGSHQ-SVSNPATNSSSLHR---- 680
Query: 604 QSPYQNINPQQSSYPMHTHQGAGTNPHITP 633
+S ++ SS ++ + GT+P+I P
Sbjct: 681 RSEDSFLSGSHSS--VNYSRSVGTDPYIRP 708
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 21/138 (15%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI--------RASAF 450
+ ++LC +G VIGK G +KQLQQ TGA I VE+ P+ S +RVI ++
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 451 EGLWN-------------PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQ 497
G N S+ A++++ + ++ T+ RLL SS G ++G+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGK 167
Query: 498 GGHVINEMRRRTQADIRV 515
GG ++ +R+ T I +
Sbjct: 168 GGQMVGSIRKETGCKISI 185
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDI 536
G RLL P S VG ++G+ G+VI ++++ T GA++++++P GS + ++ I
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQST-------GAKIRVEEPPSGSPDRVITI 96
>gi|28261403|gb|AAO37828.1| HEN4 [Arabidopsis thaliana]
Length = 869
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 103/193 (53%), Gaps = 36/193 (18%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D V++ILC + GGVIG G +V+ L ET A I V + + EER+I + +S
Sbjct: 463 DVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIAVTASEN---- 518
Query: 187 TQNKDDDSAAETKKESMEPHCA---AQDALLKVHDRIIEEDLFGGMASD---DDNENSTI 240
P C AQ A++ + R+ E +A++ D+ S+I
Sbjct: 519 ------------------PECQSSPAQKAIMLIFSRLFE------LATNKILDNGPRSSI 554
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK-PN 299
TARL+VP + +GC+LGK G ++ +R TGA I++L ++ P C D++VQI+ + PN
Sbjct: 555 TARLVVPTSQIGCVLGKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPN 614
Query: 300 VAKRALYEVSTLL 312
V + A++ +++ L
Sbjct: 615 V-REAIFHITSRL 626
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/193 (34%), Positives = 103/193 (53%), Gaps = 14/193 (7%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ- 188
+R+LCP +G VIGK+GN++K L++ T AKI V + GS +RVI I + ++ +
Sbjct: 49 FRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVKL 108
Query: 189 -NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
++ +A KKE AQ AL+KV F +A++ D++ T+ RLL
Sbjct: 109 GANNNGNAEGEKKEEEVEVSKAQGALIKV---------FELLAAEADSD--TVVCRLLTE 157
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
++ G ++GK G ++ +R ETG I + + LP CA DEMV++ G K+AL
Sbjct: 158 SSHAGAVIGKGGQMVGSIRKETGCKISIR-IENLPICADTDDEMVEVEGNAIAVKKALVS 216
Query: 308 VSTLLHQNPRKDK 320
+S L DK
Sbjct: 217 ISRCLQNCQSIDK 229
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 131/270 (48%), Gaps = 37/270 (13%)
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
PP ++ + + KILCS GGVIG GG V+ L ETGA I+V +A D +ER+I
Sbjct: 453 PPSEVEVGNQDVVFKILCSTENAGGVIGTGGKVVRMLHSETGAFINVGNALDDCEERLIA 512
Query: 447 ASAFEGLWNPRSQTIDA----------ILQL-QNKTSEFSEKGTITTRLLVPSSKVGCIL 495
+A E NP Q+ A + +L NK + + +IT RL+VP+S++GC+L
Sbjct: 513 VTASE---NPECQSSPAQKAIMLIFSRLFELATNKILDNGPRSSITARLVVPTSQIGCVL 569
Query: 496 GQGGHVINEMRRRTQADIRVVGAR------------VKLQDPHPGSSECIVDIRGSSEHL 543
G+GG +++EMR+ T A I+++ V++ + P E I I
Sbjct: 570 GKGGVIVSEMRKTTGAAIQILKVEQNPKCISENDQVVQITEEFPNVREAIFHITSRLRDS 629
Query: 544 ISAHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQ 603
+ ++ S S ++ + + + Q + ++ SHQ S N T S HR
Sbjct: 630 VFSNSMKNSLAKSSSALTTE----RFYDRQSDNPLSIGSHQ-SVSNPATNSSSLHR---- 680
Query: 604 QSPYQNINPQQSSYPMHTHQGAGTNPHITP 633
+S ++ SS ++ + GT+P+I P
Sbjct: 681 RSEDSFLSGSHSS--VNYSRSVGTDPYIRP 708
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 21/138 (15%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI--------RASAF 450
+ ++LC +G VIGK G +KQLQQ TGA I VE+ P+ S +RVI ++
Sbjct: 48 AFRLLCPLSHVGAVIGKSGNVIKQLQQSTGAKIRVEEPPSGSPDRVITIIAQADSKSRVK 107
Query: 451 EGLWN-------------PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQ 497
G N S+ A++++ + ++ T+ RLL SS G ++G+
Sbjct: 108 LGANNNGNAEGEKKEEEVEVSKAQGALIKVFELLAAEADSDTVVCRLLTESSHAGAVIGK 167
Query: 498 GGHVINEMRRRTQADIRV 515
GG ++ +R+ T I +
Sbjct: 168 GGQMVGSIRKETGCKISI 185
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%), Gaps = 7/59 (11%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDI 536
G RLL P S VG ++G+ G+VI ++++ T GA++++++P GS + ++ I
Sbjct: 45 GHAAFRLLCPLSHVGAVIGKSGNVIKQLQQST-------GAKIRVEEPPSGSPDRVITI 96
>gi|242038781|ref|XP_002466785.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
gi|241920639|gb|EER93783.1| hypothetical protein SORBIDRAFT_01g014200 [Sorghum bicolor]
Length = 430
Score = 103 bits (257), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 102/191 (53%), Gaps = 24/191 (12%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+RIL P++K+G +IG+ G +K + EET+A+I + D PG ER ++I
Sbjct: 118 PGESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMI------- 170
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI-TAR 243
K E P A D LL+VH RI D G + I R
Sbjct: 171 ------------SAKDEPDAPLSPAVDGLLRVHKRIT--DSSNGESGQLQRSAGNIGPTR 216
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
LLVP++ G L+GK+G I+ ++ + + +R++ + +PP A+N D +V+I G+P ++
Sbjct: 217 LLVPSSQAGSLIGKQGATIKSIQDSSKSVVRIV--ENVPPVALNDDRVVEIQGEPLGVQK 274
Query: 304 ALYEVSTLLHQ 314
A+ +++ L +
Sbjct: 275 AVELIASHLRK 285
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E +IL A K+G +IG+ G +K++ +ET A I + D P ER + SA +
Sbjct: 119 GESVFRILVPAQKVGAIIGRKGEFIKKMCEETKARIKILDGPPGVPERAVMISAKDEPDA 178
Query: 456 PRSQTIDAILQLQNKTSEFS--EKGTIT--------TRLLVPSSKVGCILGQGGHVINEM 505
P S +D +L++ + ++ S E G + TRLLVPSS+ G ++G+ G I +
Sbjct: 179 PLSPAVDGLLRVHKRITDSSNGESGQLQRSAGNIGPTRLLVPSSQAGSLIGKQGATIKSI 238
Query: 506 RRRTQADIRVV 516
+ +++ +R+V
Sbjct: 239 QDSSKSVVRIV 249
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 7/64 (10%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIR 537
G R+LVP+ KVG I+G+ G I +M T+ AR+K+ D PG E V I
Sbjct: 119 GESVFRILVPAQKVGAIIGRKGEFIKKMCEETK-------ARIKILDGPPGVPERAVMIS 171
Query: 538 GSSE 541
E
Sbjct: 172 AKDE 175
>gi|291237680|ref|XP_002738761.1| PREDICTED: poly(rC) binding protein 2-like [Saccoglossus
kowalevskii]
Length = 409
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 98/382 (25%), Positives = 174/382 (45%), Gaps = 52/382 (13%)
Query: 118 QSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVII 176
+ N PA T+ R++ +++G +IGK G +K RE++ A+I ++D+ ER++
Sbjct: 8 KKMANDGPAVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISDS--SCAERIVT 65
Query: 177 IYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE 236
+ S T+ ++ TKK EED+ MA +
Sbjct: 66 VTGS------TEAINNAFEMITKK--------------------FEEDVSNNMA-NSSTP 98
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
+T RL+VP + G L+GK G I+ +R TGA+++V D L +T+ V ISG
Sbjct: 99 KPPVTLRLVVPASQCGSLIGKGGSKIKEIRENTGASVQV-AGDML---HQSTERAVTISG 154
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN 356
P + +Y++ ++ ++P K P+ H P +H GN + P +
Sbjct: 155 TPEAITKCVYQICCVMLESPPKGATIPYRPKPTNATATH----PAYAVH--GNYAVPYPD 208
Query: 357 -SSLH--GMPSTPWMGG---YGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIG 410
LH M TP++ G + MG G N+ G + + + +I+ IG
Sbjct: 209 FMKLHHLTMQHTPFLPGQTPFTPTALNMGYGVANAASAGTQVATTGQQTYEIMIPNDLIG 268
Query: 411 GVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL-QN 469
VIG+GG + +++Q +GA+I + ++ S++R + S N I++ L+L +N
Sbjct: 269 CVIGRGGAKINEIRQISGATIKIANSQEGSNDRSVTISGTVEAINLAHFLINSSLELAKN 328
Query: 470 KTSEFSEKGTITTRLLVPSSKV 491
E + K L+P+S +
Sbjct: 329 LAPELAAKAN-----LIPTSAL 345
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 81/157 (51%), Gaps = 21/157 (13%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS------ 448
+ +++++ ++G +IGKGG +K+ ++++GA I++ D + ER++ +
Sbjct: 16 AVTLTIRLIMQGKEVGSIIGKGGETIKKFREQSGARINISD--SSCAERIVTVTGSTEAI 73
Query: 449 --AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMR 506
AFE + + + N + + K +T RL+VP+S+ G ++G+GG I E+R
Sbjct: 74 NNAFEMITKKFEEDVS-----NNMANSSTPKPPVTLRLVVPASQCGSLIGKGGSKIKEIR 128
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
T A ++V G D S+E V I G+ E +
Sbjct: 129 ENTGASVQVAG------DMLHQSTERAVTISGTPEAI 159
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 472 SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSE 531
++ + G T +++P+ +GC++G+GG INE+R ++ GA +K+ + GS++
Sbjct: 248 TQVATTGQQTYEIMIPNDLIGCVIGRGGAKINEIR-------QISGATIKIANSQEGSND 300
Query: 532 CIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQNINPQQS 575
V I G+ E + AH S + +++ + ++ N+ P +
Sbjct: 301 RSVTISGTVEAINLAHFLINSSLELAKNLAPELAAKANLIPTSA 344
>gi|356536806|ref|XP_003536925.1| PREDICTED: poly(rC)-binding protein 1-like [Glycine max]
Length = 561
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 100/193 (51%), Gaps = 27/193 (13%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P + V+R+L P +K+G +IG+ G ++ + E+T+A+I + D PG+ ER +++
Sbjct: 159 PGENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMV------- 211
Query: 185 AKTQNKDDDSAAETKKESMEPHCA---AQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
SA E EP C+ A D LL+VH +++ D A +
Sbjct: 212 ---------SAKE------EPDCSIPPAVDGLLRVHKQVVNVDPH--PADSASGAVRPVV 254
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
RLLV + G L+GK+G I+ + TG NIR+L ++ LP A+ D +V+I G+ +
Sbjct: 255 TRLLVADTQAGSLIGKQGSTIKSFQDATGCNIRILGSEHLPVFALRDDSIVEIQGESSGV 314
Query: 302 KRALYEVSTLLHQ 314
+A+ V+ L +
Sbjct: 315 HKAVELVAIHLRK 327
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 75/158 (47%), Gaps = 19/158 (12%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E ++L K+G +IG+ G ++++ ++T A I + D P + ER + SA E
Sbjct: 160 GENVFRMLVPVQKVGSIIGRKGEFIRKITEDTKARIKILDGPPGTSERAVMVSAKEEPDC 219
Query: 456 PRSQTIDAILQLQNKTSEF------SEKGT---ITTRLLVPSSKVGCILGQGGHVINEMR 506
+D +L++ + S G + TRLLV ++ G ++G+ G I +
Sbjct: 220 SIPPAVDGLLRVHKQVVNVDPHPADSASGAVRPVVTRLLVADTQAGSLIGKQGSTIKSFQ 279
Query: 507 RRTQADIRVVGAR----VKLQDPHPGSSECIVDIRGSS 540
T +IR++G+ L+D + IV+I+G S
Sbjct: 280 DATGCNIRILGSEHLPVFALRD------DSIVEIQGES 311
>gi|449445515|ref|XP_004140518.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
gi|449529952|ref|XP_004171961.1| PREDICTED: poly(rC)-binding protein 2-like [Cucumis sativus]
Length = 276
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 105/192 (54%), Gaps = 21/192 (10%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D ++RI+ PS++IG VIGK G ++ +REET+A I +AD + EERVIII S
Sbjct: 68 DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS------- 120
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
KD++++ +++++ A +LK IEE G + T RLL+
Sbjct: 121 ---KDNENSVTDAEKALQQIAA---LILKEDGSSIEELKVG------TGHVAANTIRLLI 168
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM--NTDEMVQISGKPNVAKRA 304
+ G L+G G I++LR+ +GA+I +L ++LP CA +D +VQISG +A
Sbjct: 169 AGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKA 228
Query: 305 LYEVSTLLHQNP 316
L E+ L NP
Sbjct: 229 LEEIGNQLRVNP 240
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG------LW 454
+I+ + +IG VIGK G ++++++ET A+I + DA +ERVI S+ +
Sbjct: 72 RIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAE 131
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGT-----ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
Q IL+ + E + GT T RLL+ S+ G ++G G I ++R +
Sbjct: 132 KALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSS 191
Query: 510 QADIRVVG 517
A I ++
Sbjct: 192 GASITILA 199
>gi|224123476|ref|XP_002319087.1| predicted protein [Populus trichocarpa]
gi|222857463|gb|EEE95010.1| predicted protein [Populus trichocarpa]
Length = 392
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 162/351 (46%), Gaps = 90/351 (25%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKD 191
+L P++K+G +IG+ G +K + EET+A+I + D PG+ ER +++
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMV-------------- 46
Query: 192 DDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST----ITARLLVP 247
SA E S+ P A D LL+VH RII+ G+ SD N T ++ RLLVP
Sbjct: 47 --SAKEEPDSSLPP---AMDGLLRVHKRIID-----GLDSDSSNTPPTSGAKVSTRLLVP 96
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK+G ++ ++ + +RVL A+ LP A+ D +V++ G+ +A+
Sbjct: 97 ASQAGSLIGKQGGTVKSIQEASTCIVRVLGAEDLPVFALQDDRVVEVLGEAAGVHKAVEL 156
Query: 308 VSTLLHQ------------------NPRKDK--------PPSSFPQAYG-----GQN--F 334
+++ L + NP ++ PP P +G GQN +
Sbjct: 157 IASHLRKFLVDRSIIPLFEMQMQMSNPSMEQMPPHQSWGPPQPLPPNHGGGPGYGQNPQY 216
Query: 335 HSPPA------PMADMHPLGNSSWPARNSSLHGMPSTPWMG--GYGDQPSRMGS-GSINS 385
PP P ADM PL M P G YG + + MGS S N+
Sbjct: 217 MPPPRQLDNYYPPADMPPL--------------MEKQPHQGISAYGRE-APMGSHASSNA 261
Query: 386 -CPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
P + +++ + M+I S VIG G ++ +++ +GA++ +++
Sbjct: 262 QAAPSMITQITQQ--MQIPLSYAD--AVIGTAGASISYIRRASGATVTIQE 308
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 95/205 (46%), Gaps = 33/205 (16%)
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE---------- 451
+L A K+G +IG+ G +K++ +ET A I + D P + ER + SA E
Sbjct: 1 MLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTTERAVMVSAKEEPDSSLPPAM 60
Query: 452 -GLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
GL + ID + + T S ++TRLLVP+S+ G ++G+ G + ++ +
Sbjct: 61 DGLLRVHKRIIDGLDSDSSNTPPTS-GAKVSTRLLVPASQAGSLIGKQGGTVKSIQEAST 119
Query: 511 ADIRVVGAR----VKLQDPHPGSSECIVDIRGSSE------HLISAHGTYQSFMTSGQSM 560
+RV+GA LQD + +V++ G + LI++H + F+ +
Sbjct: 120 CIVRVLGAEDLPVFALQD------DRVVEVLGEAAGVHKAVELIASH--LRKFLVDRSII 171
Query: 561 KVQPSSYQNINPQQSSCQTMSSHQS 585
+ Q NP S + M HQS
Sbjct: 172 PLFEMQMQMSNP---SMEQMPPHQS 193
>gi|383158165|gb|AFG61431.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 84/140 (60%), Gaps = 6/140 (4%)
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
K + KD+D E EP C AQDALL+VH I +E +D D + ARLL
Sbjct: 1 KEKEKDNDDGDEN-----EPICPAQDALLRVHSVIAQESSVKDKDNDADKKGQQ-NARLL 54
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
V N+ +G L+GK G+ IQ++R+E+GA I++ D LP CA + DE+V ISG K+AL
Sbjct: 55 VANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKAL 114
Query: 306 YEVSTLLHQNPRKDKPPSSF 325
Y VS L+++P K++ P S
Sbjct: 115 YSVSAFLYKHPPKEQIPWSL 134
>gi|147832545|emb|CAN68300.1| hypothetical protein VITISV_009906 [Vitis vinifera]
Length = 408
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 42/102 (41%), Positives = 72/102 (70%)
Query: 219 RIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA 278
R+I D + +D E + +T RLLVP+N +GC++GK G +IQ +RSE+GA IR+L
Sbjct: 262 RVIIMDYPEEVHGEDSEEANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRILKD 321
Query: 279 DRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK 320
D LP C+++++E++QIS +P + ++ LY++++ LH NP + +
Sbjct: 322 DHLPSCSLSSNELIQISREPFIVRKILYQIASRLHDNPSRSQ 363
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 6/51 (11%)
Query: 476 EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPH 526
E +T RLLVPS+++GC++G+GG +I +R + A IR+ L+D H
Sbjct: 279 EANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRI------LKDDH 323
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 31/43 (72%), Gaps = 1/43 (2%)
Query: 122 NSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
+S+ A+ V R+L PS +IG VIGK G I++S+R E+ A+I +
Sbjct: 276 DSEEANQVTVRLLVPSNQIGCVIGKGGQIIQSIRSESGAQIRI 318
>gi|356572245|ref|XP_003554280.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 528
Score = 101 bits (251), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 99/193 (51%), Gaps = 27/193 (13%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P + V+R+L P +K+G +IG+ G +K + EET+A+I + D PG ER +++
Sbjct: 122 PGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMV------- 174
Query: 185 AKTQNKDDDSAAETKKESMEPHC---AAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
SA E EP C A D LL+VH ++I D +A ++
Sbjct: 175 ---------SAKE------EPDCPIPPAVDGLLRVHKQVINVDR--DLADSALAAGRSVV 217
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
RLLV + G L+GK+G I+ ++ +G IRVL ++ LP A+ D +V+I G+
Sbjct: 218 TRLLVADTQAGSLIGKQGSTIKSIQDGSGCTIRVLGSENLPIFALRDDSIVEIQGESAGV 277
Query: 302 KRALYEVSTLLHQ 314
+A+ ++ L +
Sbjct: 278 HKAVELIAVHLRK 290
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 19/158 (12%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E ++L K+G +IG+ G +K++ +ET A I + D P ER + SA E
Sbjct: 123 GENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDC 182
Query: 456 PRSQTIDAILQLQNKT---------SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMR 506
P +D +L++ + S + ++ TRLLV ++ G ++G+ G I ++
Sbjct: 183 PIPPAVDGLLRVHKQVINVDRDLADSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQ 242
Query: 507 RRTQADIRVVGAR----VKLQDPHPGSSECIVDIRGSS 540
+ IRV+G+ L+D + IV+I+G S
Sbjct: 243 DGSGCTIRVLGSENLPIFALRD------DSIVEIQGES 274
>gi|356504987|ref|XP_003521274.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 529
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 98/192 (51%), Gaps = 25/192 (13%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P + V+R+L P +K+G +IG+ G +K + EET+A+I + D PG ER +++
Sbjct: 123 PGENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMV------- 175
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRII--EEDLFGGMASDDDNENSTITA 242
K+E P A D LL+VH ++I + DL + ++
Sbjct: 176 ------------SAKEEPDRPIPPAIDGLLRVHKQVINVDRDLVDSALA----AGRSVVT 219
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
RLLV + G L+GK+G I+ ++ +G IRVL ++ LP A+ D +V+I G+
Sbjct: 220 RLLVADTQAGSLIGKQGSTIKSIQDGSGCTIRVLGSENLPVFALRDDSIVEIQGESAGVH 279
Query: 303 RALYEVSTLLHQ 314
+A+ ++ L +
Sbjct: 280 KAVELIAVHLRK 291
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 19/158 (12%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E ++L K+G +IG+ G +K++ +ET A I + D P ER + SA E
Sbjct: 124 GENVFRMLVPVQKVGSIIGRKGEFIKKITEETKARIKILDGPPGISERAVMVSAKEEPDR 183
Query: 456 PRSQTIDAILQLQNKT---------SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMR 506
P ID +L++ + S + ++ TRLLV ++ G ++G+ G I ++
Sbjct: 184 PIPPAIDGLLRVHKQVINVDRDLVDSALAAGRSVVTRLLVADTQAGSLIGKQGSTIKSIQ 243
Query: 507 RRTQADIRVVGAR----VKLQDPHPGSSECIVDIRGSS 540
+ IRV+G+ L+D + IV+I+G S
Sbjct: 244 DGSGCTIRVLGSENLPVFALRD------DSIVEIQGES 275
>gi|218193355|gb|EEC75782.1| hypothetical protein OsI_12699 [Oryza sativa Indica Group]
Length = 510
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 101/190 (53%), Gaps = 22/190 (11%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+RIL P++K+G +IG+ G +K + EE++A+I + D PG ER ++I
Sbjct: 105 PGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMI------- 157
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
K E P A D L +V+ RI + G + N ++ RL
Sbjct: 158 ------------SAKDEPDAPISPAMDGLFRVYKRITDGS-DGDSGQPERNISNVGPTRL 204
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP + G L+GK+G I+ ++ + + +R++ + LP A+N D +V+I G+P ++A
Sbjct: 205 LVPASQAGSLIGKQGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKA 262
Query: 305 LYEVSTLLHQ 314
L +++ L +
Sbjct: 263 LESIASHLRK 272
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E +IL A K+G +IG+ G +K++ +E+ A I + D P ER + SA +
Sbjct: 106 GESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDA 165
Query: 456 PRSQTIDAILQLQNKTSEFSE----------KGTITTRLLVPSSKVGCILGQGGHVINEM 505
P S +D + ++ + ++ S+ TRLLVP+S+ G ++G+ G I +
Sbjct: 166 PISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSI 225
Query: 506 RRRTQADIRVVGA--RVKLQDPHPGSSECIVDIRG 538
+ +++ +R+V V L D + +V+I+G
Sbjct: 226 QDSSKSIVRIVETLPLVALND------DRVVEIQG 254
>gi|16924113|gb|AAL31692.1|AC092390_13 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709929|gb|ABF97724.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|215695360|dbj|BAG90551.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222625405|gb|EEE59537.1| hypothetical protein OsJ_11804 [Oryza sativa Japonica Group]
Length = 510
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 101/190 (53%), Gaps = 22/190 (11%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+RIL P++K+G +IG+ G +K + EE++A+I + D PG ER ++I
Sbjct: 105 PGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMI------- 157
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
K E P A D L +V+ RI + G + N ++ RL
Sbjct: 158 ------------SAKDEPDAPISPAMDGLFRVYKRITDGS-DGDSGQPERNISNVGPTRL 204
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP + G L+GK+G I+ ++ + + +R++ + LP A+N D +V+I G+P ++A
Sbjct: 205 LVPASQAGSLIGKQGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKA 262
Query: 305 LYEVSTLLHQ 314
L +++ L +
Sbjct: 263 LESIASHLRK 272
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E +IL A K+G +IG+ G +K++ +E+ A I + D P ER + SA +
Sbjct: 106 GESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDA 165
Query: 456 PRSQTIDAILQLQNKTSEFSE----------KGTITTRLLVPSSKVGCILGQGGHVINEM 505
P S +D + ++ + ++ S+ TRLLVP+S+ G ++G+ G I +
Sbjct: 166 PISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSI 225
Query: 506 RRRTQADIRVVGA--RVKLQDPHPGSSECIVDIRG 538
+ +++ +R+V V L D + +V+I+G
Sbjct: 226 QDSSKSIVRIVETLPLVALND------DRVVEIQG 254
>gi|297601352|ref|NP_001050707.2| Os03g0627500 [Oryza sativa Japonica Group]
gi|255674723|dbj|BAF12621.2| Os03g0627500, partial [Oryza sativa Japonica Group]
Length = 512
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 101/190 (53%), Gaps = 22/190 (11%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+RIL P++K+G +IG+ G +K + EE++A+I + D PG ER ++I
Sbjct: 107 PGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMI------- 159
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
K E P A D L +V+ RI + G + N ++ RL
Sbjct: 160 ------------SAKDEPDAPISPAMDGLFRVYKRITDGS-DGDSGQPERNISNVGPTRL 206
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP + G L+GK+G I+ ++ + + +R++ + LP A+N D +V+I G+P ++A
Sbjct: 207 LVPASQAGSLIGKQGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKA 264
Query: 305 LYEVSTLLHQ 314
L +++ L +
Sbjct: 265 LESIASHLRK 274
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 78/155 (50%), Gaps = 18/155 (11%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E +IL A K+G +IG+ G +K++ +E+ A I + D P ER + SA +
Sbjct: 108 GESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDA 167
Query: 456 PRSQTIDAILQLQNKTSEFSE----------KGTITTRLLVPSSKVGCILGQGGHVINEM 505
P S +D + ++ + ++ S+ TRLLVP+S+ G ++G+ G I +
Sbjct: 168 PISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSI 227
Query: 506 RRRTQADIRVVGA--RVKLQDPHPGSSECIVDIRG 538
+ +++ +R+V V L D + +V+I+G
Sbjct: 228 QDSSKSIVRIVETLPLVALND------DRVVEIQG 256
>gi|361066701|gb|AEW07662.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158160|gb|AFG61426.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158161|gb|AFG61427.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158162|gb|AFG61428.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158163|gb|AFG61429.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158164|gb|AFG61430.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158166|gb|AFG61432.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158167|gb|AFG61433.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158168|gb|AFG61434.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158169|gb|AFG61435.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158170|gb|AFG61436.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158171|gb|AFG61437.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158172|gb|AFG61438.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158173|gb|AFG61439.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158174|gb|AFG61440.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158175|gb|AFG61441.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158176|gb|AFG61442.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
gi|383158177|gb|AFG61443.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 100 bits (249), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 59/140 (42%), Positives = 84/140 (60%), Gaps = 6/140 (4%)
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
K + KD++ E EP C AQDALL+VH I +E +D D + ARLL
Sbjct: 1 KEKEKDNEDGDEN-----EPICPAQDALLRVHSVIAQESSVKDKDNDADKKGQQ-NARLL 54
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
V N+ +G L+GK G+ IQ++R+E+GA I++ D LP CA + DE+V ISG K+AL
Sbjct: 55 VANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDAKAVKKAL 114
Query: 306 YEVSTLLHQNPRKDKPPSSF 325
Y VS L+++P K++ P S
Sbjct: 115 YSVSAFLYKHPPKEQIPWSL 134
>gi|108862919|gb|ABA99242.2| FLK, putative, expressed [Oryza sativa Japonica Group]
gi|222617409|gb|EEE53541.1| hypothetical protein OsJ_36750 [Oryza sativa Japonica Group]
Length = 517
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 101/191 (52%), Gaps = 24/191 (12%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+RIL P++K+G VIG+ G +K + EE++A+I V D PG +R ++I +
Sbjct: 112 PGESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVMISA----- 166
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT-AR 243
K E P A D LL+VH RI D G + T+ R
Sbjct: 167 --------------KDEPDAPLPPAVDGLLRVHKRIT--DGLDGESDQPQRAAGTVGPTR 210
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
LLVP + G L+GK+G I+ ++ + +R+L + +PP A++ D +V+I G+P +
Sbjct: 211 LLVPASQAGSLIGKQGATIKSIQDASKCVLRIL--ESVPPVALSDDRVVEIQGEPLDVHK 268
Query: 304 ALYEVSTLLHQ 314
A+ +++ L +
Sbjct: 269 AVELIASHLRK 279
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 69/131 (52%), Gaps = 10/131 (7%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E +IL A K+G VIG+ G +K++ +E+ A I V D P +R + SA +
Sbjct: 113 GESVFRILVPAQKVGAVIGRKGEFIKKMCEESRARIKVLDGPPGVPDRAVMISAKDEPDA 172
Query: 456 PRSQTIDAILQLQNKTSEFSE---------KGTIT-TRLLVPSSKVGCILGQGGHVINEM 505
P +D +L++ + ++ + GT+ TRLLVP+S+ G ++G+ G I +
Sbjct: 173 PLPPAVDGLLRVHKRITDGLDGESDQPQRAAGTVGPTRLLVPASQAGSLIGKQGATIKSI 232
Query: 506 RRRTQADIRVV 516
+ ++ +R++
Sbjct: 233 QDASKCVLRIL 243
>gi|307136423|gb|ADN34230.1| hypothetical protein [Cucumis melo subsp. melo]
Length = 331
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 66/190 (34%), Positives = 104/190 (54%), Gaps = 21/190 (11%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D ++RI+ PS++IG VIGK G ++ +REET+A I +AD + EERVIII S
Sbjct: 68 DVLFRIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISS------- 120
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
KD++++ +++++ A +LK IEE G + T RLL+
Sbjct: 121 ---KDNENSVTDAEKALQQIAA---LILKEDGSSIEELKVG------TGHVAANTIRLLI 168
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM--NTDEMVQISGKPNVAKRA 304
+ G L+G G I++LR+ +GA+I +L ++LP CA +D +VQISG +A
Sbjct: 169 AGSQAGSLIGASGQNIEKLRNSSGASITILAPNQLPLCASAHESDRVVQISGDILAVLKA 228
Query: 305 LYEVSTLLHQ 314
L E+ L +
Sbjct: 229 LEEIGNQLRK 238
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 64/128 (50%), Gaps = 11/128 (8%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG------LW 454
+I+ + +IG VIGK G ++++++ET A+I + DA +ERVI S+ +
Sbjct: 72 RIVVPSKQIGKVIGKVGCRIQKVREETKATIKIADAVARYEERVIIISSKDNENSVTDAE 131
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGT-----ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
Q IL+ + E + GT T RLL+ S+ G ++G G I ++R +
Sbjct: 132 KALQQIAALILKEDGSSIEELKVGTGHVAANTIRLLIAGSQAGSLIGASGQNIEKLRNSS 191
Query: 510 QADIRVVG 517
A I ++
Sbjct: 192 GASITILA 199
>gi|223947189|gb|ACN27678.1| unknown [Zea mays]
gi|223950255|gb|ACN29211.1| unknown [Zea mays]
gi|414868821|tpg|DAA47378.1| TPA: KH domain containing protein [Zea mays]
Length = 508
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 108/194 (55%), Gaps = 30/194 (15%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+RIL P+ K+G VIG+ G+ +K + EE++A+I V + P ER ++I
Sbjct: 104 PGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMI------- 156
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN-ENSTIT-- 241
SA + + P A D LL+VH RI + G+ ++ D + +T+
Sbjct: 157 ---------SAKDEPDTELPP---AVDGLLRVHRRITD-----GLETETDQPQRATVNTG 199
Query: 242 -ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
RLLVP + G L+GK+G I+ ++ + +R++ + +PP A+N D +V+I G+P+
Sbjct: 200 PTRLLVPASQAGSLIGKQGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHD 257
Query: 301 AKRALYEVSTLLHQ 314
+ +A+ +++ L +
Sbjct: 258 SHKAVELIASHLRK 271
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 10/131 (7%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E +IL K+G VIG+ G +K++ +E+ A I V + P ER + SA +
Sbjct: 105 GESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDT 164
Query: 456 PRSQTIDAILQLQNKTSEFSE-------KGTIT---TRLLVPSSKVGCILGQGGHVINEM 505
+D +L++ + ++ E + T+ TRLLVP+S+ G ++G+ G I +
Sbjct: 165 ELPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSI 224
Query: 506 RRRTQADIRVV 516
+ ++ +R+V
Sbjct: 225 QDASKCVLRIV 235
>gi|414868822|tpg|DAA47379.1| TPA: hypothetical protein ZEAMMB73_380288 [Zea mays]
Length = 499
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 108/194 (55%), Gaps = 30/194 (15%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+RIL P+ K+G VIG+ G+ +K + EE++A+I V + P ER ++I
Sbjct: 104 PGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMI------- 156
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN-ENSTIT-- 241
SA + + P A D LL+VH RI + G+ ++ D + +T+
Sbjct: 157 ---------SAKDEPDTELPP---AVDGLLRVHRRITD-----GLETETDQPQRATVNTG 199
Query: 242 -ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
RLLVP + G L+GK+G I+ ++ + +R++ + +PP A+N D +V+I G+P+
Sbjct: 200 PTRLLVPASQAGSLIGKQGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHD 257
Query: 301 AKRALYEVSTLLHQ 314
+ +A+ +++ L +
Sbjct: 258 SHKAVELIASHLRK 271
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 10/131 (7%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E +IL K+G VIG+ G +K++ +E+ A I V + P ER + SA +
Sbjct: 105 GESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDT 164
Query: 456 PRSQTIDAILQLQNKTSEFSE-------KGTIT---TRLLVPSSKVGCILGQGGHVINEM 505
+D +L++ + ++ E + T+ TRLLVP+S+ G ++G+ G I +
Sbjct: 165 ELPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSI 224
Query: 506 RRRTQADIRVV 516
+ ++ +R+V
Sbjct: 225 QDASKCVLRIV 235
>gi|357140452|ref|XP_003571781.1| PREDICTED: uncharacterized protein LOC100836040 [Brachypodium
distachyon]
Length = 587
Score = 99.4 bits (246), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 111/214 (51%), Gaps = 26/214 (12%)
Query: 101 KGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAK 160
+G + + +N S ++ P TV+R+L S K+G +IG+ G V+ L EET+A
Sbjct: 35 QGFSHLDSADDTNCSAGENRYPGWPGTTVFRMLISSTKVGAIIGQKGERVRRLCEETKAS 94
Query: 161 ITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI 220
+ V + ERV++I++ K++ EP A DALL+V+ I
Sbjct: 95 VRVIGGHFAAAERVVLIFA-------------------KEQPDEPIPPAMDALLRVYQNI 135
Query: 221 IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
+ +D GM SD S + R+L+P+ L+G++G +I + + +IRVL +
Sbjct: 136 VNDDGL-GMGSD-----SAVVTRILIPSEQALNLIGEQGSMINLIEEASQTDIRVLDCN- 188
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQ 314
LPP A++ D +V+I G+P ++AL V+ L +
Sbjct: 189 LPPAALDEDRIVEIWGQPTRVRKALELVARHLRK 222
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 341 MADMHPLGNSSWP---ARNSSLHGMPSTPWMGGYGDQP-SRMGSGSINSCPPGQ--MGEV 394
M D+H W R S HG MG +Q S + S +C G+
Sbjct: 1 MVDVHKNSTERWVTQMVRKS--HGREGNEVMGTVMEQGFSHLDSADDTNCSAGENRYPGW 58
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
++L S+ K+G +IG+ G V++L +ET AS+ V + ERV+ A E
Sbjct: 59 PGTTVFRMLISSTKVGAIIGQKGERVRRLCEETKASVRVIGGHFAAAERVVLIFAKEQPD 118
Query: 455 NPRSQTIDAILQL-QNKTSE----FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
P +DA+L++ QN ++ + TR+L+PS + ++G+ G +IN + +
Sbjct: 119 EPIPPAMDALLRVYQNIVNDDGLGMGSDSAVVTRILIPSEQALNLIGEQGSMINLIEEAS 178
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
Q DIRV+ + P + IV+I G
Sbjct: 179 QTDIRVLDCNLP---PAALDEDRIVEIWG 204
>gi|226494805|ref|NP_001148654.1| KH domain containing protein [Zea mays]
gi|195621126|gb|ACG32393.1| KH domain containing protein [Zea mays]
Length = 529
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 59/194 (30%), Positives = 108/194 (55%), Gaps = 30/194 (15%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+RIL P+ K+G VIG+ G+ +K + EE++A+I V + P ER ++I
Sbjct: 104 PGESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMI------- 156
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN-ENSTIT-- 241
SA + + P A D LL+VH RI + G+ ++ D + +T+
Sbjct: 157 ---------SAKDEPDTELPP---AVDGLLRVHRRITD-----GLETETDQPQRATVNTG 199
Query: 242 -ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
RLLVP + G L+GK+G I+ ++ + +R++ + +PP A+N D +V+I G+P+
Sbjct: 200 PTRLLVPASQAGSLIGKQGATIKSIQDASKCVLRIV--ENVPPVALNDDRVVEIQGEPHD 257
Query: 301 AKRALYEVSTLLHQ 314
+ +A+ +++ L +
Sbjct: 258 SHKAVELIASHLRK 271
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 67/131 (51%), Gaps = 10/131 (7%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E +IL K+G VIG+ G +K++ +E+ A I V + P ER + SA +
Sbjct: 105 GESVFRILVPTTKVGAVIGRKGDFIKKMCEESRARIKVLEGPPAVPERAVMISAKDEPDT 164
Query: 456 PRSQTIDAILQLQNKTSEFSE-------KGTIT---TRLLVPSSKVGCILGQGGHVINEM 505
+D +L++ + ++ E + T+ TRLLVP+S+ G ++G+ G I +
Sbjct: 165 ELPPAVDGLLRVHRRITDGLETETDQPQRATVNTGPTRLLVPASQAGSLIGKQGATIKSI 224
Query: 506 RRRTQADIRVV 516
+ ++ +R+V
Sbjct: 225 QDASKCVLRIV 235
>gi|147794489|emb|CAN67081.1| hypothetical protein VITISV_007074 [Vitis vinifera]
Length = 534
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 101/187 (54%), Gaps = 26/187 (13%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+L P++K+G +IG+ G +K + EET+A+I + D PG+ ER +++
Sbjct: 130 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMV------------ 177
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE--NSTITARLLVP 247
SA E S+ P A D LLKVH RI++ G+ D + ++ RLLV
Sbjct: 178 ----SAKEEPDSSLPP---AMDGLLKVHKRIVD-----GLEGDSSHMPPGGKVSTRLLVA 225
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK+G ++ ++ + +RVL A+ LP A+ D +V++ G+P +A+
Sbjct: 226 ASQAGSLIGKQGGTVKSIQEASNCIVRVLGAEDLPIFALQDDRVVEVVGEPIGVHKAVEL 285
Query: 308 VSTLLHQ 314
+++ L +
Sbjct: 286 IASHLRK 292
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/130 (28%), Positives = 67/130 (51%), Gaps = 14/130 (10%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS----------- 448
++L A K+G +IG+ G +K++ +ET A I + D P + ER + S
Sbjct: 130 FRMLVPAQKVGSIIGRKGEFIKKIVEETRARIKILDGPPGTAERAVMVSAKEEPDSSLPP 189
Query: 449 AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
A +GL + +D L+ +S G ++TRLLV +S+ G ++G+ G + ++
Sbjct: 190 AMDGLLKVHKRIVDG---LEGDSSHMPPGGKVSTRLLVAASQAGSLIGKQGGTVKSIQEA 246
Query: 509 TQADIRVVGA 518
+ +RV+GA
Sbjct: 247 SNCIVRVLGA 256
>gi|357157425|ref|XP_003577794.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 527
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 103/194 (53%), Gaps = 30/194 (15%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+R+L P +K+G VIG+ G +K + EE++A+I + D PG ER ++I +
Sbjct: 123 PGESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMISA----- 177
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI---- 240
KD+ A + A D LL+VH RI + G+ S+ D
Sbjct: 178 -----KDEPDALVS---------PAVDGLLRVHKRITD-----GLDSETDQPQRGAGPVG 218
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
RLLVP + G L+GK+G I+ ++ + +R+L + +PP A+N D +V+I G+P
Sbjct: 219 PTRLLVPASQAGSLIGKQGATIKSIQDASKCALRIL--ENVPPVALNDDRVVEIQGEPLD 276
Query: 301 AKRALYEVSTLLHQ 314
+A+ +++ L +
Sbjct: 277 VHKAVELIASHLRK 290
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 66/130 (50%), Gaps = 10/130 (7%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
E ++L K+G VIG+ G +K++ +E+ A I + D P ER + SA +
Sbjct: 125 ESVFRVLVPVQKVGAVIGRKGEFIKKMCEESRARIKILDGPPGVPERAVMISAKDEPDAL 184
Query: 457 RSQTIDAILQLQNKTSEFSEKGTIT----------TRLLVPSSKVGCILGQGGHVINEMR 506
S +D +L++ + ++ + T TRLLVP+S+ G ++G+ G I ++
Sbjct: 185 VSPAVDGLLRVHKRITDGLDSETDQPQRGAGPVGPTRLLVPASQAGSLIGKQGATIKSIQ 244
Query: 507 RRTQADIRVV 516
++ +R++
Sbjct: 245 DASKCALRIL 254
>gi|108709930|gb|ABF97725.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
Length = 389
Score = 98.6 bits (244), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/190 (30%), Positives = 101/190 (53%), Gaps = 22/190 (11%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++V+RIL P++K+G +IG+ G +K + EE++A+I + D PG ER ++I
Sbjct: 105 PGESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMI------- 157
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
K E P A D L +V+ RI + G + N ++ RL
Sbjct: 158 ------------SAKDEPDAPISPAMDGLFRVYKRITDGS-DGDSGQPERNISNVGPTRL 204
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP + G L+GK+G I+ ++ + + +R++ + LP A+N D +V+I G+P ++A
Sbjct: 205 LVPASQAGSLIGKQGATIKSIQDSSKSIVRIV--ETLPLVALNDDRVVEIQGEPVGVQKA 262
Query: 305 LYEVSTLLHQ 314
L +++ L +
Sbjct: 263 LESIASHLRK 272
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 10/131 (7%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E +IL A K+G +IG+ G +K++ +E+ A I + D P ER + SA +
Sbjct: 106 GESVFRILIPAQKVGAIIGRKGEFIKKMCEESKARIKILDGPPGVPERTVMISAKDEPDA 165
Query: 456 PRSQTIDAILQLQNKTSEFSE----------KGTITTRLLVPSSKVGCILGQGGHVINEM 505
P S +D + ++ + ++ S+ TRLLVP+S+ G ++G+ G I +
Sbjct: 166 PISPAMDGLFRVYKRITDGSDGDSGQPERNISNVGPTRLLVPASQAGSLIGKQGATIKSI 225
Query: 506 RRRTQADIRVV 516
+ +++ +R+V
Sbjct: 226 QDSSKSIVRIV 236
>gi|357507881|ref|XP_003624229.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355499244|gb|AES80447.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 275
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/192 (35%), Positives = 101/192 (52%), Gaps = 37/192 (19%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D ++RI+ PS++IG VIGK G ++ +RE T+A I +AD I EERVIII S
Sbjct: 99 DVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISS------- 151
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED--------LFGGMASDDDNENS 238
KD+D E A+ AL ++ + I++ED L G + +
Sbjct: 152 ---KDND----------EMVTDAEKALEQIANLILKEDNSSFDASKLTAGHVAAN----- 193
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPC--AMNTDEMVQISG 296
T RLL+ + G L+G G I++LR+ +GA I VL +LP C A +D +VQ+SG
Sbjct: 194 --TIRLLIAGSQAGGLIGMSGQNIEKLRNSSGAMITVLAPSQLPLCASAHESDRVVQLSG 251
Query: 297 KPNVAKRALYEV 308
+ +AL E+
Sbjct: 252 DVSTVMKALEEI 263
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/128 (28%), Positives = 66/128 (51%), Gaps = 11/128 (8%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG------LW 454
+I+ + +IG VIGK G ++++++ T A+I + DA +ERVI S+ +
Sbjct: 103 RIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDNDEMVTDAE 162
Query: 455 NPRSQTIDAILQLQNKTSEFSE--KGTI---TTRLLVPSSKVGCILGQGGHVINEMRRRT 509
Q + IL+ N + + S+ G + T RLL+ S+ G ++G G I ++R +
Sbjct: 163 KALEQIANLILKEDNSSFDASKLTAGHVAANTIRLLIAGSQAGGLIGMSGQNIEKLRNSS 222
Query: 510 QADIRVVG 517
A I V+
Sbjct: 223 GAMITVLA 230
>gi|334187557|ref|NP_196518.3| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332004027|gb|AED91410.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 612
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 113/433 (26%), Positives = 194/433 (44%), Gaps = 76/433 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT-IPGSEERVIIIYSSPTKIAKTQ 188
+RILC + G VIGK G +VK L + T++ I V T + S R+I I+ +++ +
Sbjct: 32 FRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSVSRVK 91
Query: 189 ----NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
+ + + ++E AQ AL+ R+ E FG D +ST++ L
Sbjct: 92 LGVIVNNVSNREKKEQEQEVEVSRAQYALI----RVFEALNFG------DCTSSTVSCNL 141
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-KPNVAKR 303
L+ + V ++GK G+++QR+ ETG N+++ D L C D +++I G + + +
Sbjct: 142 LMEGSHVVTVIGKNGELMQRILEETGCNVQLRSHD-LSICTNPGDVVLKIEGNRLSAVMK 200
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHG-- 361
AL +S+ L P P S+ + H+ P A P+ S R HG
Sbjct: 201 ALVSISSRLQACP----PIST-------ASLHAEAVPDALRRPMEYRSQQYREVDPHGSL 249
Query: 362 ---------------------MPSTPWMGGYGDQPSRMGSGSINSCPPGQMGE-VSA--- 396
P ++ + S S N PP + + + A
Sbjct: 250 HRHVEISQEDALVRPFFRTITQPRIDYLPHPSYDHRLITSASKN--PPVTIKQPLQASKD 307
Query: 397 ---EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGL 453
+ +KILCS VI + + T ASI V D D DER++ +AFE
Sbjct: 308 DIRQVDLKILCSNESASVVI--------KTRSVTDASISVGDRHPDCDERLVTITAFEKT 359
Query: 454 WNPRSQTIDAILQL-----QNKTSEFSEKG---TITTRLLVPSSKVGCILGQGGHVINEM 505
+ S++ A++ + +N T++ + G +IT RL+V S+++ C+LG+ G + +
Sbjct: 360 KDITSESQRALVLVFSNMYENATAKVLDSGLTSSITARLVVRSNQINCLLGEEGRIKTTI 419
Query: 506 RRRTQADIRVVGA 518
++RT A I V+
Sbjct: 420 QQRTGAFITVLNV 432
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 41/214 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
+ILC + ++ ++V R T A I+V D P +ER++ I T KT++
Sbjct: 315 KILCSN--------ESASVVIKTRSVTDASISVGDRHPDCDERLVTI----TAFEKTKDI 362
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+S Q AL+ V + E + D S+ITARL+V +N
Sbjct: 363 TSES---------------QRALVLVFSNMYENATAKVL---DSGLTSSITARLVVRSNQ 404
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK-PNVAKRALYEVS 309
+ CLLG+ G + ++ TGA I VL ++ P C +++VQISG+ PNV + A+ +V+
Sbjct: 405 INCLLGEEGRIKTTIQQRTGAFITVLNVEQNPKCVSENNQVVQISGEFPNV-REAINQVT 463
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQ---NFHSPPAP 340
++L R+D SF + G Q N+ P P
Sbjct: 464 SML----REDLINQSFQR--GSQYAVNYSEDPFP 491
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT-DSDERVIR 446
+ +ILC+ + G VIGK G VK+L + T +SI VE P DS R+I+
Sbjct: 31 TFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIK 79
>gi|79550843|ref|NP_178410.2| putative RNA-binding protein [Arabidopsis thaliana]
gi|45752620|gb|AAS76208.1| At2g03110 [Arabidopsis thaliana]
gi|46359791|gb|AAS88759.1| At2g03110 [Arabidopsis thaliana]
gi|330250570|gb|AEC05664.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 153
Score = 96.7 bits (239), Expect = 3e-17, Method: Composition-based stats.
Identities = 61/164 (37%), Positives = 98/164 (59%), Gaps = 18/164 (10%)
Query: 161 ITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI 220
+ V + +PG +ERV+ IYS+ + + ++ ++D C A DAL KVHD +
Sbjct: 1 MRVNEALPGCDERVVTIYSNSEERNRIEDDNEDFV-----------CPAFDALFKVHDMV 49
Query: 221 IEEDLFGGMASDDDNENS----TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVL 276
+ E+ +D++E S +T R+LVP++ +G L+GK G +IQ LR++T A IRV
Sbjct: 50 VVEEFDDDDDYNDNDEYSEGQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV- 108
Query: 277 PADRLPPC--AMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRK 318
D LP C A++ DE++QI G P+ + ALY+V+ LL+ NP +
Sbjct: 109 RNDNLPMCALALSHDELLQIIGDPSAVREALYQVAFLLYNNPSR 152
Score = 42.4 bits (98), Expect = 0.84, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+T R+LVPS ++G ++G+GG +I +R T A IRV
Sbjct: 73 VTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV 108
>gi|119629730|gb|EAX09325.1| poly(rC) binding protein 3, isoform CRA_c [Homo sapiens]
Length = 370
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 165/378 (43%), Gaps = 84/378 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMH--------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPF 253
Query: 346 -PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKI 402
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 254 PPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL-- 303
Query: 403 LCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTID 462
IG +IG+ G + +++Q +GA I + +A S ER I + P + ++
Sbjct: 304 ------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG-----TPANISLA 352
Query: 463 AILQLQNKTSEFSEKGTI 480
L TSE + GT+
Sbjct: 353 QYLINARLTSEVTGMGTL 370
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAI 187
Score = 42.0 bits (97), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 95
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 294 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 346
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 347 ANISLAQYLINARLTS 362
>gi|384947752|gb|AFI37481.1| poly(rC)-binding protein 3 isoform 1 [Macaca mulatta]
Length = 370
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 165/378 (43%), Gaps = 84/378 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMH--------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPF 253
Query: 346 -PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKI 402
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 254 PPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL-- 303
Query: 403 LCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTID 462
IG +IG+ G + +++Q +GA I + +A S ER I + P + ++
Sbjct: 304 ------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG-----TPANISLA 352
Query: 463 AILQLQNKTSEFSEKGTI 480
L TSE + GT+
Sbjct: 353 QYLINARLTSEVTGMGTL 370
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 47.4 bits (111), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAI 187
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 95
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 294 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 346
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 347 ANISLAQYLINARLTS 362
>gi|109065035|ref|XP_001099540.1| PREDICTED: poly(rC)-binding protein 3-like isoform 4 [Macaca
mulatta]
Length = 370
Score = 96.7 bits (239), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 165/378 (43%), Gaps = 84/378 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMH--------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPF 253
Query: 346 -PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKI 402
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 254 PPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL-- 303
Query: 403 LCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTID 462
IG +IG+ G + +++Q +GA I + +A S ER I + P + ++
Sbjct: 304 ------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG-----TPANISLA 352
Query: 463 AILQLQNKTSEFSEKGTI 480
L TSE + GT+
Sbjct: 353 QYLINARLTSEVTGMGTL 370
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAI 187
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 95
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 294 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 346
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 347 ANISLAQYLINARLTS 362
>gi|431893776|gb|ELK03594.1| Poly(rC)-binding protein 3 [Pteropus alecto]
Length = 339
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 93/344 (27%), Positives = 155/344 (45%), Gaps = 80/344 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +R+E+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMRDESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 221
Query: 346 --PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG N ++P SLH + G QPS +++ PP E++ +
Sbjct: 222 FPPLGQTNPAFPGEKLSLHSSEEAQNLMG---QPS-----GLDASPPASTHELTIPNDL- 272
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 273 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 309
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK+++ E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAI 155
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMRDESGARINISEGN----CP---ERIVTITG 63
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 64 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 100
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 263 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 315
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 316 ANISLAQYLINARLTS 331
>gi|361066699|gb|AEW07661.1| Pinus taeda anonymous locus 0_8463_01 genomic sequence
Length = 139
Score = 96.3 bits (238), Expect = 4e-17, Method: Composition-based stats.
Identities = 60/140 (42%), Positives = 83/140 (59%), Gaps = 6/140 (4%)
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
K + KD+D E EP C AQDALL+VH I +E SD D + ARLL
Sbjct: 1 KEKEKDNDDGDEN-----EPICPAQDALLRVHSVIAQESSAKDKDSDADKKGQQ-NARLL 54
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
V N+ +G L+GK G+ IQ++R+E+GA I++ D LP CA + DE+V ISG K+AL
Sbjct: 55 VANSQIGSLIGKGGNNIQKMRTESGAQIQIPRKDELPGCAFSFDELVVISGDATAVKKAL 114
Query: 306 YEVSTLLHQNPRKDKPPSSF 325
Y VS L+++ K++ P S
Sbjct: 115 YAVSAFLYKHLPKEQIPWSL 134
>gi|449463577|ref|XP_004149510.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 3-like
[Cucumis sativus]
Length = 468
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 101/186 (54%), Gaps = 28/186 (15%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P K+G +IG+ G+++K + EET+A+I V D G+ +RV++I
Sbjct: 78 PGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLI------- 130
Query: 185 AKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI-TA 242
+ KE +E P A DA+++V R+ G++ ++D ++ +
Sbjct: 131 -------------SGKEELESPLSPAMDAVIRVFKRV------SGLSENEDEAKASFCSI 171
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
RLLV + L+GK+G +I+ ++ TGA++RVL D +P A + MV++ G+
Sbjct: 172 RLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEMPFYAGADERMVELQGESLKVL 231
Query: 303 RALYEV 308
+AL V
Sbjct: 232 KALEGV 237
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 84/156 (53%), Gaps = 14/156 (8%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G +K++ +ET A I V D + +RV+ S E L +P S
Sbjct: 83 FRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSP 142
Query: 460 TIDAILQLQNKTSEFSE-----KGTI-TTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+DA++++ + S SE K + + RLLV S++ ++G+ G +I ++ T A +
Sbjct: 143 AMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 202
Query: 514 RVVGARVKLQDPHP---GSSECIVDIRGSSEHLISA 546
RV+ D P G+ E +V+++G S ++ A
Sbjct: 203 RVLSG-----DEMPFYAGADERMVELQGESLKVLKA 233
>gi|194306631|ref|NP_065389.2| poly(rC)-binding protein 3 isoform 1 [Homo sapiens]
gi|296439262|sp|P57721.2|PCBP3_HUMAN RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|119629729|gb|EAX09324.1| poly(rC) binding protein 3, isoform CRA_b [Homo sapiens]
Length = 371
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 165/379 (43%), Gaps = 85/379 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 253
Query: 346 --PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 254 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 304
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTI 461
IG +IG+ G + +++Q +GA I + +A S ER I + P + ++
Sbjct: 305 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG-----TPANISL 352
Query: 462 DAILQLQNKTSEFSEKGTI 480
L TSE + GT+
Sbjct: 353 AQYLINARLTSEVTGMGTL 371
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 107/270 (39%), Gaps = 64/270 (23%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 219
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF---------------------- 226
A + + PH D L K+H +++ F
Sbjct: 220 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 276
Query: 227 ----GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
G +S D T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 277 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 334
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+++ + I+G P A Y ++ L
Sbjct: 335 ---GSSERQITITGTPANISLAQYLINARL 361
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 95
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 295 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 347
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 348 ANISLAQYLINARLTS 363
>gi|332872312|ref|XP_001157899.2| PREDICTED: poly(rC)-binding protein 3 isoform 8 [Pan troglodytes]
gi|397506692|ref|XP_003823855.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Pan paniscus]
gi|426393341|ref|XP_004062983.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 371
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 165/379 (43%), Gaps = 85/379 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 253
Query: 346 --PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 254 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 304
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTI 461
IG +IG+ G + +++Q +GA I + +A S ER I + P + ++
Sbjct: 305 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG-----TPANISL 352
Query: 462 DAILQLQNKTSEFSEKGTI 480
L TSE + GT+
Sbjct: 353 AQYLINARLTSEVTGMGTL 371
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 107/270 (39%), Gaps = 64/270 (23%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 219
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF---------------------- 226
A + + PH D L K+H +++ F
Sbjct: 220 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 276
Query: 227 ----GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
G +S D T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 277 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 334
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+++ + I+G P A Y ++ L
Sbjct: 335 ---GSSERQITITGTPANISLAQYLINARL 361
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 95
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 295 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 347
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 348 ANISLAQYLINARLTS 363
>gi|9957165|gb|AAG09240.1|AF176329_1 alphaCP-3 [Homo sapiens]
Length = 339
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 99/379 (26%), Positives = 165/379 (43%), Gaps = 85/379 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 221
Query: 346 --PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 222 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 272
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTI 461
IG +IG+ G + +++Q +GA I + +A S ER I + + I
Sbjct: 273 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLI 325
Query: 462 DAILQLQNKTSEFSEKGTI 480
+A L TSE + GT+
Sbjct: 326 NARL-----TSEVTGMGTL 339
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAI 155
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 63
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 64 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 100
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 263 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 315
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 316 ANISLAQYLINARLTS 331
>gi|380798665|gb|AFE71208.1| poly(rC)-binding protein 3 isoform 1, partial [Macaca mulatta]
Length = 370
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 165/379 (43%), Gaps = 85/379 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 48 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 96
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 97 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 136
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 137 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 192
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 193 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 252
Query: 346 --PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 253 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 303
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTI 461
IG +IG+ G + +++Q +GA I + +A S ER I + P + ++
Sbjct: 304 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG-----TPANISL 351
Query: 462 DAILQLQNKTSEFSEKGTI 480
L TSE + GT+
Sbjct: 352 AQYLINARLTSEVTGMGTL 370
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 39 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 91
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 92 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 150
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 151 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 187
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 107/270 (39%), Gaps = 64/270 (23%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 100 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 158
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 159 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 218
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF---------------------- 226
A + + PH D L K+H +++ F
Sbjct: 219 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 275
Query: 227 ----GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
G +S D T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 276 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 333
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+++ + I+G P A Y ++ L
Sbjct: 334 ---GSSERQITITGTPANISLAQYLINARL 360
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 42 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 94
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 95 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 131
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 294 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 346
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 347 ANISLAQYLINARLTS 362
>gi|426218401|ref|XP_004003435.1| PREDICTED: poly(rC)-binding protein 3 isoform 4 [Ovis aries]
Length = 332
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 153/344 (44%), Gaps = 85/344 (24%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLV 246
DA+ K I EED+ M++ +T RL+V
Sbjct: 66 ---------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + +
Sbjct: 105 PASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVK 160
Query: 307 EVSTLLHQNPRKDKP------PSSFP------QAYGGQNFHSPPAP-MADMH-------- 345
++ ++ ++PRK P+S P QAY Q ++ P P + +H
Sbjct: 161 QICVVMLESPRKGVTVVVAPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTP 220
Query: 346 --PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG N ++P + ++ + S PW +++ PP E++ +
Sbjct: 221 FPPLGQTNPAFPGTDRAVPFVRS-PW-------------ACLDASPPASTHELTIPNDL- 265
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 266 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 302
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 107/241 (44%), Gaps = 30/241 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS----G 557
I E+R T A ++V G D P S+E V I G+ + +I M G
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPRKG 173
Query: 558 QSMKVQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSY 617
++ V P P + + Q Y + + H++ QQ+P+ + ++
Sbjct: 174 VTVVVAPKPAS--TPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAF 231
Query: 618 P 618
P
Sbjct: 232 P 232
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 108/260 (41%), Gaps = 51/260 (19%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDA---- 212
A++ VA D +P S ER + I +P I + + E+ ++ + A + A
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPRKGVTVVVAPKPASTPV 187
Query: 213 --------------------LLKVHDRIIEEDLFGGMASDD------------------- 233
L K+H +++ F + +
Sbjct: 188 IFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGTDRAVPFVRSPWAC 247
Query: 234 -DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
D T L +PN+++GC++G++G I +R +GA I++ A +++ +
Sbjct: 248 LDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----GSSERQI 302
Query: 293 QISGKPNVAKRALYEVSTLL 312
I+G P A Y ++ L
Sbjct: 303 TITGTPANISLAQYLINARL 322
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 63
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 64 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 100
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 256 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 308
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 309 ANISLAQYLINARLTS 324
>gi|344306639|ref|XP_003421993.1| PREDICTED: poly(rC)-binding protein 3 [Loxodonta africana]
Length = 396
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 100/407 (24%), Positives = 168/407 (41%), Gaps = 93/407 (22%)
Query: 68 HLLSHSRCIRFCCIMDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPAD 127
HLL + I+ +RP F R+ + +G +
Sbjct: 24 HLLRWGDTLWAPSILPHDVIGVLSQRPQPHFGRRMESKVSEGGLN-------------VT 70
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 71 LTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT----- 122
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARL 244
DA+ K I EED+ M++ +T RL
Sbjct: 123 -----------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRL 159
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
+VP + G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ +
Sbjct: 160 VVPASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQC 215
Query: 305 LYEVSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH----- 345
+ ++ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 216 VKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQ 275
Query: 346 -----PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF 398
PLG N ++P LH + G S +++ PP E++
Sbjct: 276 QTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPN 327
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+ IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 328 DL--------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 366
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 65 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 117
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 118 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 176
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 177 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 213
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 118 QSFG-NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVII 176
QS G ++ P + + + P+ IG +IG+ G + +R+ + A+I +A+ GS ER I
Sbjct: 308 QSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQIT 367
Query: 177 IYSSPTKIAKTQ 188
I SP I+ Q
Sbjct: 368 ITGSPANISLAQ 379
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I GS
Sbjct: 320 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGSP 372
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 373 ANISLAQYLINARLTS 388
>gi|126341837|ref|XP_001363414.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Monodelphis domestica]
Length = 586
Score = 95.1 bits (235), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 184/425 (43%), Gaps = 75/425 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
G + D R+L P++ +G +IGK G ++++ ++TQ+KI + G+ E+ I I++
Sbjct: 191 GQNHQNDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHA 250
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
SP E C K+ I++++ + D
Sbjct: 251 SP-------------------EGCSTAC-------KIIMEIMQKE------AQDTKFTDE 278
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
I ++L NN VG L+GK G ++++ +T I + P L N + + + G
Sbjct: 279 IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSIE 336
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
+A E+ + + S+ N + P +++ LG +PA S
Sbjct: 337 TCGKAEEEIMKKIRE---------SYESDLSAMNLQAHLLPGLNLNALG--LFPASTS-- 383
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
G+PS +G PS + + N P GQ E ++ + A +G +IGK G +
Sbjct: 384 -GIPSPSTLG----VPS--AAAATNYLPYGQQAETE---TVHLFIPAMAVGAIIGKMGQH 433
Query: 420 VKQLQQETGASIHVEDAPT-DSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS--- 475
+KQL + GASI + T D+ ER++ + P A ++ K E +
Sbjct: 434 IKQLSRFAGASIKIAPPETPDAKERMVIITG------PPEAQFKAQGRIYGKLKEENFFG 487
Query: 476 --EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECI 533
E+ + ++ VPS G ++G+GG +NE++ T A+ VV R ++ D + E I
Sbjct: 488 PKEEVKLEAQIKVPSYAAGRVIGKGGKTVNELQNLTSAE--VVVPRDQIPDEN---DEVI 542
Query: 534 VDIRG 538
V I G
Sbjct: 543 VKITG 547
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 37/84 (44%), Gaps = 7/84 (8%)
Query: 94 PNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSL 153
P QFK +G + + E FG + +I PS G VIGK G V L
Sbjct: 466 PEAQFKAQGRI------YGKLKEENFFGPKEEVKLEAQIKVPSYAAGRVIGKGGKTVNEL 519
Query: 154 REETQAKITV-ADTIPGSEERVII 176
+ T A++ V D IP + VI+
Sbjct: 520 QNLTSAEVVVPRDQIPDENDEVIV 543
>gi|348554794|ref|XP_003463210.1| PREDICTED: poly(rC)-binding protein 3-like [Cavia porcellus]
Length = 384
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 152/344 (44%), Gaps = 80/344 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 62 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 110
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 111 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 150
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 151 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 206
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 207 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 266
Query: 346 --PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 267 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 317
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 318 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 354
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 53 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 105
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 106 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 164
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 165 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 201
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 107/270 (39%), Gaps = 64/270 (23%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 114 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 172
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 173 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 232
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF---------------------- 226
A + + PH D L K+H +++ F
Sbjct: 233 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 289
Query: 227 ----GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
G +S D T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 290 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 347
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+++ + I+G P A Y ++ L
Sbjct: 348 ---GSSERQITITGTPANISLAQYLINARL 374
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 56 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 108
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 109 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 145
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 308 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 360
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 361 ANISLAQYLINARLTS 376
>gi|115482006|ref|NP_001064596.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|78708635|gb|ABB47610.1| KH domain containing protein, expressed [Oryza sativa Japonica
Group]
gi|113639205|dbj|BAF26510.1| Os10g0414700 [Oryza sativa Japonica Group]
gi|215693240|dbj|BAG88622.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222612825|gb|EEE50957.1| hypothetical protein OsJ_31513 [Oryza sativa Japonica Group]
Length = 586
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 108/214 (50%), Gaps = 26/214 (12%)
Query: 101 KGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAK 160
+G ++ +N S ++ P +V+R+L P+ K+G VIG +G ++ L EET+A
Sbjct: 32 QGATDDEECGGTNCSAGENRDPGWPGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKAC 91
Query: 161 ITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI 220
+ V + ER +II++ K++ EP A DALL+V++ I
Sbjct: 92 VRVIGGHFAAAERAVIIFA-------------------KEQPDEPKPPAIDALLRVYECI 132
Query: 221 IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
I +D G+ D N+ + AR+L P+ L+G +G VI ++ + NI V+ D
Sbjct: 133 INDD---GL---DVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASKTNIHVIDGD- 185
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQ 314
LPP A+ D +++I G P +AL V+ L +
Sbjct: 186 LPPVALEDDMIIEIWGLPARVHQALELVACHLRK 219
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 14/147 (9%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
++L A K+G VIG G +++L +ET A + V + ER + A E P+
Sbjct: 61 FRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKPP 120
Query: 460 TIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
IDA+L+ + + + + R+L PS + ++G G VIN +++ ++ +I
Sbjct: 121 AIDALLRVYECIINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASKTNIH 180
Query: 515 VVGAR---VKLQDPHPGSSECIVDIRG 538
V+ V L+D + I++I G
Sbjct: 181 VIDGDLPPVALED------DMIIEIWG 201
>gi|403297203|ref|XP_003939468.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 371
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 152/344 (44%), Gaps = 80/344 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 253
Query: 346 --PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 254 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 304
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 305 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 341
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 107/270 (39%), Gaps = 64/270 (23%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 219
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF---------------------- 226
A + + PH D L K+H +++ F
Sbjct: 220 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 276
Query: 227 ----GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
G +S D T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 277 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 334
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+++ + I+G P A Y ++ L
Sbjct: 335 ---GSSERQITITGTPANISLAQYLINARL 361
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 95
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 295 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 347
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 348 ANISLAQYLINARLTS 363
>gi|148699884|gb|EDL31831.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699885|gb|EDL31832.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699886|gb|EDL31833.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699889|gb|EDL31836.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|148699890|gb|EDL31837.1| poly(rC) binding protein 3, isoform CRA_b [Mus musculus]
gi|149043678|gb|EDL97129.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043679|gb|EDL97130.1| rCG61051, isoform CRA_b [Rattus norvegicus]
gi|149043680|gb|EDL97131.1| rCG61051, isoform CRA_b [Rattus norvegicus]
Length = 339
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 152/344 (44%), Gaps = 80/344 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 221
Query: 346 --PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 222 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 272
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 273 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 309
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAI 155
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 63
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 64 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 100
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 263 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 315
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 316 ANISLAQYLINARLTS 331
>gi|395540426|ref|XP_003772156.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like [Sarcophilus harrisii]
Length = 587
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 104/425 (24%), Positives = 183/425 (43%), Gaps = 75/425 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
G + D R+L P++ +G +IGK G ++++ ++TQ+KI + G+ E+ I I++
Sbjct: 191 GQNHQNDIPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGASEKPITIHA 250
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
SP E C K+ I++++ + D
Sbjct: 251 SP-------------------EGCSTAC-------KIIMEIMQKE------AQDTKFTDE 278
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
I ++L NN VG L+GK G ++++ +T I + P L N + + + G
Sbjct: 279 IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGSIE 336
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
+A E+ + + S+ N + P +++ LG +PA S
Sbjct: 337 TCGKAEEEIMKKIRE---------SYESDLSAMNLQAHLLPGLNLNALG--LFPASTS-- 383
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
G+PS +G PS + + N P GQ E ++ + A +G +IGK G +
Sbjct: 384 -GIPSPSTLG----VPS--AAAATNYLPYGQQAETE---TVHLFIPAMAVGAIIGKMGQH 433
Query: 420 VKQLQQETGASIHVEDAPT-DSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS--- 475
+KQL + GASI + T D+ ER++ + P A ++ K E +
Sbjct: 434 IKQLSRFAGASIKIAPPETPDAKERMVI------ITGPPEAQFKAQGRIYGKLKEENFFG 487
Query: 476 --EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECI 533
E+ + + VPS G ++G+GG +NE++ T A+ VV R ++ D + E I
Sbjct: 488 PKEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAE--VVVPRDQIPDEN---DEVI 542
Query: 534 VDIRG 538
V I G
Sbjct: 543 VKITG 547
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 94 PNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSL 153
P QFK +G + + E FG + I PS G VIGK G V L
Sbjct: 466 PEAQFKAQGRI------YGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNEL 519
Query: 154 REETQAKITV-ADTIPGSEERVII 176
+ T A++ V D IP + VI+
Sbjct: 520 QNLTSAEVVVPRDQIPDENDEVIV 543
>gi|26330216|dbj|BAC28838.1| unnamed protein product [Mus musculus]
Length = 370
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 152/343 (44%), Gaps = 79/343 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMH--------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPF 253
Query: 346 -PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKI 402
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 254 PPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL-- 303
Query: 403 LCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 304 ------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 340
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAI 187
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 226 FGGMASDDDNE---NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
FGG +E N T+T RLL+ VG ++GK+G+ ++++R E+GA I + +
Sbjct: 29 FGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN--- 85
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
C + +V I+G + +A ++ ++ P KPP +
Sbjct: 86 -CP---ERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 294 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 346
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 347 ANISLAQYLINARLTS 362
>gi|440894425|gb|ELR46887.1| Poly(rC)-binding protein 3 [Bos grunniens mutus]
Length = 374
Score = 94.7 bits (234), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 152/344 (44%), Gaps = 80/344 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 52 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 100
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 101 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 140
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 141 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 196
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 197 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 256
Query: 346 --PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 257 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 307
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 308 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 344
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 43 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 95
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 96 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 154
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 155 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 191
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 107/270 (39%), Gaps = 64/270 (23%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 104 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 162
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 163 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 222
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF---------------------- 226
A + + PH D L K+H +++ F
Sbjct: 223 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 279
Query: 227 ----GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
G +S D T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 280 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 337
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+++ + I+G P A Y ++ L
Sbjct: 338 ---GSSERQITITGTPANISLAQYLINARL 364
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 46 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 98
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 99 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 135
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 298 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 350
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 351 ANISLAQYLINARLTS 366
>gi|148699887|gb|EDL31834.1| poly(rC) binding protein 3, isoform CRA_c [Mus musculus]
Length = 373
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/343 (26%), Positives = 152/343 (44%), Gaps = 79/343 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 52 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 100
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 101 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 140
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 141 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 196
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMH--------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 197 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPF 256
Query: 346 -PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKI 402
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 257 PPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL-- 306
Query: 403 LCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 307 ------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 343
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 43 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 95
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 96 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 154
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 155 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 191
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 104 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 162
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 163 GAQVQVAGDMLPNSTERAVTISGTPDAI 190
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 226 FGGMASDDDNE---NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
FGG +E N T+T RLL+ VG ++GK+G+ ++++R E+GA I + +
Sbjct: 32 FGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN--- 88
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
C + +V I+G + +A ++ ++ P KPP +
Sbjct: 89 -CP---ERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 135
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 297 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 349
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 350 ANISLAQYLINARLTS 365
>gi|354476790|ref|XP_003500606.1| PREDICTED: poly(rC)-binding protein 3 [Cricetulus griseus]
gi|149043674|gb|EDL97125.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043675|gb|EDL97126.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043676|gb|EDL97127.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|149043677|gb|EDL97128.1| rCG61051, isoform CRA_a [Rattus norvegicus]
gi|344241934|gb|EGV98037.1| Poly(rC)-binding protein 3 [Cricetulus griseus]
Length = 371
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 152/344 (44%), Gaps = 80/344 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 253
Query: 346 --PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 254 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 304
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 305 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 341
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 107/270 (39%), Gaps = 64/270 (23%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 219
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF---------------------- 226
A + + PH D L K+H +++ F
Sbjct: 220 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 276
Query: 227 ----GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
G +S D T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 277 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 334
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+++ + I+G P A Y ++ L
Sbjct: 335 ---GSSERQITITGTPANISLAQYLINARL 361
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 226 FGGMASDDDNE---NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
FGG +E N T+T RLL+ VG ++GK+G+ ++++R E+GA I + +
Sbjct: 29 FGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN--- 85
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
C + +V I+G + +A ++ ++ P KPP +
Sbjct: 86 -CP---ERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 295 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 347
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 348 ANISLAQYLINARLTS 363
>gi|171906586|ref|NP_067543.2| poly(rC)-binding protein 3 [Mus musculus]
gi|296439279|sp|P57722.3|PCBP3_MOUSE RecName: Full=Poly(rC)-binding protein 3; AltName: Full=Alpha-CP3
gi|26348076|dbj|BAC37686.1| unnamed protein product [Mus musculus]
gi|148699881|gb|EDL31828.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699882|gb|EDL31829.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699883|gb|EDL31830.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
gi|148699888|gb|EDL31835.1| poly(rC) binding protein 3, isoform CRA_a [Mus musculus]
Length = 371
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 152/344 (44%), Gaps = 80/344 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 253
Query: 346 --PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 254 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 304
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 305 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 341
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 107/270 (39%), Gaps = 64/270 (23%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 219
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF---------------------- 226
A + + PH D L K+H +++ F
Sbjct: 220 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 276
Query: 227 ----GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
G +S D T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 277 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 334
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+++ + I+G P A Y ++ L
Sbjct: 335 ---GSSERQITITGTPANISLAQYLINARL 361
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 226 FGGMASDDDNE---NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
FGG +E N T+T RLL+ VG ++GK+G+ ++++R E+GA I + +
Sbjct: 29 FGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN--- 85
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
C + +V I+G + +A ++ ++ P KPP +
Sbjct: 86 -CP---ERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 295 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 347
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 348 ANISLAQYLINARLTS 363
>gi|412992928|emb|CCO16461.1| predicted protein [Bathycoccus prasinos]
Length = 703
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/213 (33%), Positives = 113/213 (53%), Gaps = 33/213 (15%)
Query: 129 VYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKT 187
+YR+LCP+ + G VIGK G VK L+ ++ AKI V + + ERVI I +
Sbjct: 266 LYRLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVEPPVDSTIAERVIAI--------EA 317
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARL 244
Q+ DD + +Q ALL++ + I+ E + G A ++ N I RL
Sbjct: 318 QDVDDPTV----------WAPSQIALLRIVETIVLDAERNTTIGAAEEN---NGHIVIRL 364
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK--PNVAK 302
L+P++ + ++G+ G+VI+R+R +G+++RVLP+ P CA DE++QIS + NVA
Sbjct: 365 LLPSSQIRNVIGRFGNVIERIRVGSGSHVRVLPSSETPRCAKRNDEVLQISAESMENVAS 424
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFH 335
AL ++T L + PP + GG H
Sbjct: 425 -ALAMITTQLRLD-----PPVRAHELPGGTKVH 451
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/130 (36%), Positives = 73/130 (56%), Gaps = 15/130 (11%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD--ERVIRASAFE----GLW 454
++LC + G VIGK G VKQLQ+++GA I VE P DS ERVI A + +W
Sbjct: 268 RLLCPNARAGSVIGKNGEKVKQLQRDSGAKIKVE-PPVDSTIAERVIAIEAQDVDDPTVW 326
Query: 455 NPRSQTIDAILQL------QNKTSEFSEK--GTITTRLLVPSSKVGCILGQGGHVINEMR 506
P + I++ +N T +E+ G I RLL+PSS++ ++G+ G+VI +R
Sbjct: 327 APSQIALLRIVETIVLDAERNTTIGAAEENNGHIVIRLLLPSSQIRNVIGRFGNVIERIR 386
Query: 507 RRTQADIRVV 516
+ + +RV+
Sbjct: 387 VGSGSHVRVL 396
>gi|327260862|ref|XP_003215252.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 339
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 152/344 (44%), Gaps = 80/344 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 221
Query: 346 --PLGNSS--WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG ++ +P LH + G S +++ PP E++ +
Sbjct: 222 FTPLGQTTPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 272
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 273 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 309
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++ +
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT 65
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + D I + N T+ + K +T RL+VP+S+ G ++G+GG I
Sbjct: 66 DAIFKAFAMIAYKFEE--DIINSMSNSTA--TSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 122 EIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 107/270 (39%), Gaps = 64/270 (23%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 187
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG--------------------- 227
A + + PH D L K+H +++ F
Sbjct: 188 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEE 244
Query: 228 -----GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
G +S D T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 245 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 302
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+++ + I+G P A Y ++ L
Sbjct: 303 ---GSSERQITITGTPANISLAQYLINARL 329
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 49
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 263 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 315
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 316 ANISLAQYLINARLTS 331
>gi|356528013|ref|XP_003532600.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 167
Score = 94.0 bits (232), Expect = 2e-16, Method: Composition-based stats.
Identities = 59/166 (35%), Positives = 98/166 (59%), Gaps = 25/166 (15%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+LC + ++G +IGK+G ++KSL+E T AKI + D P S +RVI++ S+P
Sbjct: 27 FRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILV-SAP-------- 77
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
S E + S AQ+ALLKV DR+++ +A+ + + ++ RLL +
Sbjct: 78 ----SVTEDGELS-----TAQEALLKVFDRVLD------VAAGTEVGDLVVSCRLLAETS 122
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
VG ++GK G V++++R +TG IRVL + LP +DE+V++S
Sbjct: 123 QVGAVIGKAGKVVEKIRMDTGCKIRVL-NEGLPAGTAPSDEIVEVS 167
Score = 74.7 bits (182), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/128 (34%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
+ + ++LC A ++G +IGK G +K LQ+ TGA I + DAP DS +RVI SA
Sbjct: 22 TTHVTFRLLCHASRVGAIIGKSGVLIKSLQEATGAKIRIVDAPPDSPDRVILVSAPSVTE 81
Query: 455 NPRSQTI-DAILQLQNKTSEF---SEKG--TITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+ T +A+L++ ++ + +E G ++ RLL +S+VG ++G+ G V+ ++R
Sbjct: 82 DGELSTAQEALLKVFDRVLDVAAGTEVGDLVVSCRLLAETSQVGAVIGKAGKVVEKIRMD 141
Query: 509 TQADIRVV 516
T IRV+
Sbjct: 142 TGCKIRVL 149
>gi|427785521|gb|JAA58212.1| Putative igf-ii mrna-binding protein imp [Rhipicephalus pulchellus]
Length = 657
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 102/404 (25%), Positives = 174/404 (43%), Gaps = 58/404 (14%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKI 184
+D RIL S +G +IG+AG ++ + ++++A++ V GS E+VI IY +P
Sbjct: 204 SDFPLRILVLSDMVGAIIGRAGGTIRQITQQSRARVDVHRKENAGSLEKVITIYGNPENC 263
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN-STITAR 243
+ K +L+V M + N N + +
Sbjct: 264 STACQK----------------------ILEV------------MQQEASNTNRGDVPLK 289
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+L NN++G ++GK G+ I+R+ +T I V + A++ + ++ I GKP R
Sbjct: 290 ILAHNNLIGRIIGKSGNTIKRIMEQTDTKITV--SSLHDGSALHLERVITIKGKPEGVCR 347
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
A VS L Q+ D + PQ+ H PMA M P +
Sbjct: 348 AEQLVSAKLRQSYESDLAALA-PQSLMFPGLH----PMAMMSAYPPPPPPHGPPARPPHY 402
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSA----EFSMKILCSA---GKIGGVIGKG 416
GG P +G G + G MG + +++C +G +IG G
Sbjct: 403 RGGGGGGPYPHPPAVGGGYMGGAVHGPMGGYMSPSHGGVERELVCLYIPNTAVGAIIGTG 462
Query: 417 GFNVKQLQQETGASIHV----EDAPTDSDER-VIRASAFEGLWNPRSQTIDAILQLQNKT 471
G +++ + +GASI V +D P D+ ER V E W +S + + +
Sbjct: 463 GSSIRDMIMLSGASIKVAQPNKDDPADAHERKVTIVGTPECQWRAQSMIFNKVCY---EG 519
Query: 472 SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ GT+ + VPS++VG I+G+GG + E++R T+A I++
Sbjct: 520 CMGNPDGTLRVEIFVPSNQVGRIIGKGGQTVRELQRLTRALIKL 563
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 40/75 (53%), Gaps = 3/75 (4%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE---ER 173
+Q N+ D +IL + IG +IGK+GN +K + E+T KITV+ GS ER
Sbjct: 275 QQEASNTNRGDVPLKILAHNNLIGRIIGKSGNTIKRIMEQTDTKITVSSLHDGSALHLER 334
Query: 174 VIIIYSSPTKIAKTQ 188
VI I P + + +
Sbjct: 335 VITIKGKPEGVCRAE 349
>gi|363735768|ref|XP_003641607.1| PREDICTED: poly(rC)-binding protein 3-like [Gallus gallus]
gi|449506326|ref|XP_002191682.2| PREDICTED: poly(rC)-binding protein 3 [Taeniopygia guttata]
Length = 339
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 152/344 (44%), Gaps = 80/344 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 221
Query: 346 --PLGNSS--WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG ++ +P LH + G S +++ PP E++ +
Sbjct: 222 FTPLGQTTPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 272
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 273 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 309
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 107/270 (39%), Gaps = 64/270 (23%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDITNSMSNSTATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 187
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG--------------------- 227
A + + PH D L K+H +++ F
Sbjct: 188 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEE 244
Query: 228 -----GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
G +S D T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 245 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 302
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+++ + I+G P A Y ++ L
Sbjct: 303 ---GSSERQITITGTPANISLAQYLINARL 329
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 49
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 263 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 315
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 316 ANISLAQYLINARLTS 331
>gi|395536907|ref|XP_003770450.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Sarcophilus
harrisii]
Length = 339
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 152/344 (44%), Gaps = 80/344 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 221
Query: 346 --PLGNSS--WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG ++ +P LH + G S +++ PP E++ +
Sbjct: 222 FPPLGQTTPAFPGEKLPLHSSEEAQNLMGQ--------SPGLDASPPASTHELTIPNDL- 272
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 273 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 309
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++ +
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT 65
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + D I + N T+ + K +T RL+VP+S+ G ++G+GG I
Sbjct: 66 DAIFKAFAMIAYKFEE--DIINSMSNSTA--TSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 122 EIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAI 155
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 49
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 263 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 315
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 316 ANISLAQYLINARLTS 331
>gi|114684793|ref|XP_001157578.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan troglodytes]
gi|397506694|ref|XP_003823856.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Pan paniscus]
gi|426393343|ref|XP_004062984.1| PREDICTED: poly(rC)-binding protein 3 [Gorilla gorilla gorilla]
Length = 351
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 160/361 (44%), Gaps = 69/361 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH- 360
+ ++ ++P K +P P+S P + G ++ A H P + + LH
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH-------PDQLTKLHQ 246
Query: 361 -GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
M TP+ P+ G +++ PP E++ + IG +IG+ G
Sbjct: 247 LAMQQTPFPPLGQTNPAFPG---LDASPPASTHELTIPNDL--------IGCIIGRQGTK 295
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT 479
+ +++Q +GA I + +A S ER I + P + ++ L TSE + GT
Sbjct: 296 INEIRQMSGAQIKIANATEGSSERQITITG-----TPANISLAQYLINARLTSEVTGMGT 350
Query: 480 I 480
+
Sbjct: 351 L 351
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 44/250 (17%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 219
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD------DNENSTITA 242
A + + PH D L K+H +++ F + + D T
Sbjct: 220 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDASPPASTH 276
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
L +PN+++GC++G++G I +R +GA I++ A +++ + I+G P
Sbjct: 277 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----GSSERQITITGTPANIS 331
Query: 303 RALYEVSTLL 312
A Y ++ L
Sbjct: 332 LAQYLINARL 341
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 95
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 275 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 327
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 328 ANISLAQYLINARLTS 343
>gi|351697348|gb|EHB00267.1| Poly(rC)-binding protein 3 [Heterocephalus glaber]
Length = 427
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 100/384 (26%), Positives = 167/384 (43%), Gaps = 82/384 (21%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 92 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 140
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 141 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 180
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 181 ASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQ 236
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAPMADMHPLGNSSWPAR 355
+ ++ ++P K +P P+S P QAY Q ++ P P H L S +
Sbjct: 237 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDPLAHGLYQPSAILQ 296
Query: 356 NSSLH--GMPSTPW----------------MGGYGDQPSRMG-SGSINSCPPGQMGEVSA 396
+ LH M TP+ + + + MG S +++ PP E++
Sbjct: 297 LTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTI 356
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+ IG +IG+ G + +++Q +GA I + +A S ER I + +
Sbjct: 357 PNDL--------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISL 408
Query: 457 RSQTIDAILQLQNKTSEFSEKGTI 480
I+A L TSE + GT+
Sbjct: 409 AQYLINARL-----TSEVTGMGTL 427
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 83 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 135
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 136 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 194
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 195 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 231
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 144 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 202
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 203 GAQVQVAGDMLPNSTERAVTISGTPDAI 230
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 86 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 124
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 351 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 403
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 404 ANISLAQYLINARLTS 419
>gi|9957161|gb|AAG09238.1|AF176327_1 alphaCP-3 [Mus musculus]
Length = 339
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 151/344 (43%), Gaps = 80/344 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIFQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+ P QAY Q ++ P P + +H
Sbjct: 162 ICVVMLESPPKGATIPYRPKPACTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 221
Query: 346 --PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 222 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 272
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 273 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 309
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 81/162 (50%), Gaps = 24/162 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
I E+R T A ++V G D P S+E V I G+ + +
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAI 155
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/267 (22%), Positives = 108/267 (40%), Gaps = 58/267 (21%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESM------EPHCAAQ 210
A++ VA D +P S ER + I +P I + + E+ + +P C
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIFQCVKQICVVMLESPPKGATIPYRPKPACTPV 187
Query: 211 -------------------DALLKVHDRIIEEDLF------------------------- 226
D L K+H +++ F
Sbjct: 188 IFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQN 247
Query: 227 -GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCA 285
G +S D T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 248 LMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE----- 302
Query: 286 MNTDEMVQISGKPNVAKRALYEVSTLL 312
+++ + I+G P A Y ++ L
Sbjct: 303 GSSERQITITGTPANISLAQYLINARL 329
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 63
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 64 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 100
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 263 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 315
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 316 ANISLAQYLINARLTS 331
>gi|124359391|gb|ABN05855.1| KH, type 1 [Medicago truncatula]
Length = 222
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/182 (32%), Positives = 99/182 (54%), Gaps = 20/182 (10%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPT---KI 184
+R+LC S +IGGVIGK+G ++K+L+ T AKI + D+ S +RVI++ + K+
Sbjct: 48 VAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIMVIGASNIDGKV 107
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
+ D A E K AQ+ALL+V DRI+E + + T++ RL
Sbjct: 108 MVRSHSGDGEAIEVSK--------AQEALLRVFDRILE---VAAEMEGIELGDRTVSCRL 156
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
+ + G ++GK G V+++++ +TG I V D LP C + DE+++ S A R+
Sbjct: 157 VADSAQAGSVIGKGGKVVEKIKKDTGCKIWVC-KDNLPACISSPDEVIECS-----ASRS 210
Query: 305 LY 306
++
Sbjct: 211 MF 212
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 103/211 (48%), Gaps = 51/211 (24%)
Query: 331 GQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPS-TPWMGGYGD--QPSRMGSGSINSCP 387
G NF SPPA S+ G+P P+ G +PS+ P
Sbjct: 2 GSNFLSPPA----------------KRSITGLPDPNPFPNGSSKRAKPSK---------P 36
Query: 388 PGQMGEVSA-EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
P Q + A + ++LC++ +IGGVIGK G +K LQ TGA I +ED+P +S +RVI
Sbjct: 37 PQQPLPIPAGHVAFRLLCNSSRIGGVIGKSGTVIKNLQLTTGAKIRIEDSPNESPDRVIM 96
Query: 447 ---ASAFEGLWNPRSQTID-----------AILQLQNKTSEFS------EKG--TITTRL 484
AS +G RS + D A+L++ ++ E + E G T++ RL
Sbjct: 97 VIGASNIDGKVMVRSHSGDGEAIEVSKAQEALLRVFDRILEVAAEMEGIELGDRTVSCRL 156
Query: 485 LVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ S++ G ++G+GG V+ ++++ T I V
Sbjct: 157 VADSAQAGSVIGKGGKVVEKIKKDTGCKIWV 187
>gi|193248243|dbj|BAC04327.2| unnamed protein product [Homo sapiens]
Length = 319
Score = 92.4 bits (228), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 94/361 (26%), Positives = 160/361 (44%), Gaps = 69/361 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH- 360
+ ++ ++P K +P P+S P + G ++ A H P + + LH
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH-------PDQLTKLHQ 214
Query: 361 -GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
M TP+ P+ G +++ PP E++ + IG +IG+ G
Sbjct: 215 LAMQQTPFPPLGQTNPAFPG---LDASPPASTHELTIPNDL--------IGCIIGRQGTK 263
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT 479
+ +++Q +GA I + +A S ER I + + I+A L TSE + GT
Sbjct: 264 INEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL-----TSEVTGMGT 318
Query: 480 I 480
+
Sbjct: 319 L 319
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 44/250 (17%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 187
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD------DNENSTITA 242
A + + PH D L K+H +++ F + + D T
Sbjct: 188 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDASPPASTH 244
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
L +PN+++GC++G++G I +R +GA I++ A +++ + I+G P
Sbjct: 245 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----GSSERQITITGTPANIS 299
Query: 303 RALYEVSTLL 312
A Y ++ L
Sbjct: 300 LAQYLINARL 309
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 63
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 64 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 100
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 243 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 295
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 296 ANISLAQYLINARLTS 311
>gi|426218397|ref|XP_004003433.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Ovis aries]
Length = 319
Score = 92.4 bits (228), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 87/332 (26%), Positives = 146/332 (43%), Gaps = 74/332 (22%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLV 246
DA+ K I EED+ M++ +T RL+V
Sbjct: 66 ---------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + +
Sbjct: 105 PASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVK 160
Query: 307 EVSTLLHQNPRKDKP------PSSFP------QAYGGQNFHSPPAP-MADMHPLGNSSWP 353
++ ++ ++PRK P+S P QAY Q ++ P P + +H L P
Sbjct: 161 QICVVMLESPRKGVTVVVAPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTP 220
Query: 354 ARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVI 413
P +G Q + +++ PP E++ + IG +I
Sbjct: 221 F-----------PPLG----QTNPAFPAGLDASPPASTHELTIPNDL--------IGCII 257
Query: 414 GKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
G+ G + +++Q +GA I + +A S ER I
Sbjct: 258 GRQGTKINEIRQMSGAQIKIANATEGSSERQI 289
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 108/247 (43%), Gaps = 38/247 (15%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDA---- 212
A++ VA D +P S ER + I +P I + + E+ ++ + A + A
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPRKGVTVVVAPKPASTPV 187
Query: 213 --------------------LLKVHDRIIEEDLFGGMASDD-------DNENSTITARLL 245
L K+H +++ F + + D T L
Sbjct: 188 IFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPAGLDASPPASTHELT 247
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+PN+++GC++G++G I +R +GA I++ A +++ + I+G P A
Sbjct: 248 IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQ 302
Query: 306 YEVSTLL 312
Y ++ L
Sbjct: 303 YLINARL 309
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 63
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 64 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 100
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 243 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 295
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 296 ANISLAQYLINARLTS 311
>gi|386764188|ref|NP_001036268.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
gi|383293323|gb|ABI30974.2| IGF-II mRNA-binding protein, isoform K [Drosophila melanogaster]
Length = 631
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 107/453 (23%), Positives = 189/453 (41%), Gaps = 77/453 (16%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G + AD RIL S +G +IG+ G+ ++++ ++++A++ V + + GS E+ I IY
Sbjct: 129 GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV-GSLEKSITIY 187
Query: 179 SSPTKIAKTQNKD----DDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD 234
+P + A T K + P C
Sbjct: 188 GNPENCTNACKRILEVMQQEAISTNKGELSPEC--------------------------- 220
Query: 235 NENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
S I ++L NN++G ++GK G+ I+R+ +T I V + + + N + ++ +
Sbjct: 221 ---SEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--NSFNLERIITV 275
Query: 295 SGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPA 354
G RA ++ST L Q+ D QA Q+ P +HP+ S P
Sbjct: 276 KGLIENMSRAENQISTKLRQSYENDL------QAMAPQSLMFP-----GLHPMAMMSTPG 324
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
+GM M Q M + PP ++ + I +A +G +IG
Sbjct: 325 -----NGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNA--VGAIIG 377
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDE--------RVIRASAFEGLWNPRSQTIDAILQ 466
G +++ + + + AS+ + AP D+D+ +V EG W + + +
Sbjct: 378 TRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKM-- 433
Query: 467 LQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ 523
+ F ++ +T LLV SS+VG I+G+GG + E++R T + I++ L
Sbjct: 434 ---REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL--PEHALA 488
Query: 524 DPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS 556
P G E V I G + SA ++ M S
Sbjct: 489 PPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLS 521
>gi|356549146|ref|XP_003542958.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 89/340 (26%), Positives = 158/340 (46%), Gaps = 59/340 (17%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P V+R++ P K+G +IG+ G ++K EET+A+I V D G+ +R+++I
Sbjct: 43 PGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLI------- 95
Query: 185 AKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI--- 240
+ KE +E P A DA+++V R+ G D N+ S +
Sbjct: 96 -------------SGKEDLEAPLSPAMDAVIRVFKRV-----SGFSEIDAKNKASAVAFC 137
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
+ RLLV + L+GK+G +I+ ++ TGA++RVL D +P A + +V++ G+
Sbjct: 138 SVRLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMK 197
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQ---------------NFHSP--PAPMAD 343
+AL V L + + F + Y + HS P+ + D
Sbjct: 198 VLKALEAVVGHLRKFLVDNSVLPLFEKTYNATISQERQADTTWVDKPSLHSASQPSIVTD 257
Query: 344 MHPLG---NSSWPARNSSLHGM--PSTPWMGGYGDQPSRMGSGSIN--SCPPGQMGEVSA 396
+ PL +S + R S L + PST M G S + S +++ S PP +
Sbjct: 258 I-PLSTKRDSLFADRESQLDSLLPPSTMSMYGQDSSLSGLRSSALSRPSAPPIVTTVIQ- 315
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 436
+M+I S + +IG G N++ +++ +GA + V+++
Sbjct: 316 --TMQIPLSYAE--DIIGIQGTNIEYIRRTSGAILTVQES 351
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 92/194 (47%), Gaps = 17/194 (8%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G +K+ +ET A I V D + +R++ S E L P S
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEDLEAPLSP 107
Query: 460 TIDAILQLQNKTSEFSEKGT---------ITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
+DA++++ + S FSE + RLLV S++ ++G+ G +I ++ T
Sbjct: 108 AMDAVIRVFKRVSGFSEIDAKNKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTG 167
Query: 511 ADIRVV-GARVKLQDPHPGSSECIVDIRGSSEHLISAH----GTYQSFMTSGQSMKVQPS 565
A +RV+ G V + + E IV+++G + ++ A G + F+ + +
Sbjct: 168 ASVRVLSGDEVPF---YAAADERIVELQGEAMKVLKALEAVVGHLRKFLVDNSVLPLFEK 224
Query: 566 SYQNINPQQSSCQT 579
+Y Q+ T
Sbjct: 225 TYNATISQERQADT 238
>gi|386764191|ref|NP_001245616.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
gi|383293324|gb|AFH07330.1| IGF-II mRNA-binding protein, isoform L [Drosophila melanogaster]
Length = 638
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 193/456 (42%), Gaps = 83/456 (18%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G + AD RIL S +G +IG+ G+ ++++ ++++A++ V + + GS E+ I IY
Sbjct: 136 GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV-GSLEKSITIY 194
Query: 179 SSP-------TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMAS 231
+P +I + ++ A T K + P C
Sbjct: 195 GNPENCTNACKRILEVMQQE---AISTNKGELSPEC------------------------ 227
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
S I ++L NN++G ++GK G+ I+R+ +T I V + + + N + +
Sbjct: 228 ------SEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--NSFNLERI 279
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSS 351
+ + G RA ++ST L Q+ D QA Q+ P +HP+ S
Sbjct: 280 ITVKGLIENMSRAENQISTKLRQSYENDL------QAMAPQSLMFP-----GLHPMAMMS 328
Query: 352 WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGG 411
P +GM M Q M + PP ++ + I +A +G
Sbjct: 329 TPG-----NGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNA--VGA 381
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTDSDE--------RVIRASAFEGLWNPRSQTIDA 463
+IG G +++ + + + AS+ + AP D+D+ +V EG W + +
Sbjct: 382 IIGTRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEK 439
Query: 464 ILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARV 520
+ + F ++ +T LLV SS+VG I+G+GG + E++R T + I++
Sbjct: 440 M-----REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL--PEH 492
Query: 521 KLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS 556
L P G E V I G + SA ++ M S
Sbjct: 493 ALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLS 528
>gi|432931637|ref|XP_004081712.1| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Oryzias
latipes]
Length = 321
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 98/378 (25%), Positives = 166/378 (43%), Gaps = 70/378 (18%)
Query: 114 SSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEER 173
S++ QS G T+ R+L +++G +IGK G VK +REE+ A+I +++ ER
Sbjct: 3 STKVQSEGGLNVTLTI-RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPER 59
Query: 174 VIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMA 230
++ I + PT D + K I EED+ M+
Sbjct: 60 IVTI-TGPT----------------------------DTIFKAFAMIAYKFEEDIINSMS 90
Query: 231 SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE 290
+ +T RL+VP + G L+GK G I+ +R TGA ++V D LP +T+
Sbjct: 91 NSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV-AGDMLP---NSTER 146
Query: 291 MVQISGKPNVAKRALYEVSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADM 344
V ISG P + + ++ ++ ++P K +P P+S P + G ++ A
Sbjct: 147 AVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQAYTIQGQYAIP 206
Query: 345 HPLGNSSWPARNSSLH--GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKI 402
H P + + LH M TP+ P+ G +++ PP E++ +
Sbjct: 207 H-------PDQLTKLHQLAMQQTPFTPLGQTTPAFPG---LDAAPPASTHELTIPNDL-- 254
Query: 403 LCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTID 462
IG +IG+ G + +++Q +GA I + +A S ER I + + I+
Sbjct: 255 ------IGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLIN 308
Query: 463 AILQLQNKTSEFSEKGTI 480
A L TSE + GT+
Sbjct: 309 ARL-----TSEVTGMGTL 321
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 86/161 (53%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++ +
Sbjct: 10 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT 67
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + D I + N S + K +T RL+VP+S+ G ++G+GG I
Sbjct: 68 DTIFKAFAMIAYKFEE--DIINSMSN--SPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
EMR T A ++V G D P S+E V I G+ E +I
Sbjct: 124 EMRESTGAQVQVAG------DMLPNSTERAVTISGTPEAII 158
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 44/250 (17%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEMREST 129
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 130 GAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 189
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD------DNENSTITA 242
A + + PH D L K+H +++ F + D T
Sbjct: 190 IFSGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFTPLGQTTPAFPGLDAAPPASTH 246
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
L +PN+++GC++G++G I +R +GA I++ A +++ + I+G P
Sbjct: 247 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANA-----MEGSSERQITITGTPANIS 301
Query: 303 RALYEVSTLL 312
A Y ++ L
Sbjct: 302 LAQYLINARL 311
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 245 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANAMEGSSERQITITGTP 297
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 298 ANISLAQYLINARLTS 313
>gi|392339927|ref|XP_003753941.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|392347297|ref|XP_003749789.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Rattus norvegicus]
gi|149033413|gb|EDL88214.1| insulin-like growth factor 2, binding protein 3 [Rattus norvegicus]
Length = 579
Score = 92.0 bits (227), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQTSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ + A +
Sbjct: 375 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSV 417
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 472
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 473 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 523
>gi|410952454|ref|XP_003982895.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Felis catus]
Length = 579
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 172/403 (42%), Gaps = 72/403 (17%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIII 177
S +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I I
Sbjct: 187 SISKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITI 246
Query: 178 YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN 237
S+P + +A ++ E M H AQD + EE
Sbjct: 247 LSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE-------------- 276
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
I ++L NN VG L+GK G ++++ +T I + P L N + + + G
Sbjct: 277 --IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGN 332
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
+A E+ + + S+ N + P +++ LG +P +
Sbjct: 333 VETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG--LFPPTS- 380
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
GMP P G PS M PP E S ++ + A +G +IGK G
Sbjct: 381 ---GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSVGAIIGKQG 425
Query: 418 FNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-- 475
++KQL + GASI + AP ++ + +R G P A ++ K E +
Sbjct: 426 QHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYGKIKEENFV 480
Query: 476 ---EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 481 SPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 523
>gi|296209450|ref|XP_002751548.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Callithrix jacchus]
Length = 579
Score = 92.0 bits (227), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 172/403 (42%), Gaps = 72/403 (17%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIII 177
S +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I I
Sbjct: 187 SMSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITI 246
Query: 178 YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN 237
S+P + +A ++ E M H AQD + EE
Sbjct: 247 LSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE-------------- 276
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
I ++L NN VG L+GK G ++++ +T I + P L N + + + G
Sbjct: 277 --IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGN 332
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
+A E+ + + S+ N + P +++ LG +P +
Sbjct: 333 VETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG--LFPPTS- 380
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
GMP P G PS M PP E S ++ + A +G +IGK G
Sbjct: 381 ---GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSVGAIIGKQG 425
Query: 418 FNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-- 475
++KQL + GASI + AP ++ + +R G P A ++ K E +
Sbjct: 426 QHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYGKIKEENFV 480
Query: 476 ---EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 481 SPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 523
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 39/206 (18%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT-IPGSEERVIIIYSSPTKIA 185
+TV+ + P+ +G +IGK G +K L A I +A P ++ R++II P
Sbjct: 406 ETVH-LFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQF 464
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
K Q + ++ +I EE+ E + A +
Sbjct: 465 KAQGR-------------------------IYGKIKEENFVS------PKEEVKLEAHIR 493
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---KPNVAK 302
VP+ G ++GK G + L++ + A + V+P D+ P N +V+I+G VA+
Sbjct: 494 VPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP--DENDQVVVKITGHFYACQVAQ 550
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQA 328
R + E+ T + Q+ ++ PS PQ+
Sbjct: 551 RKIQEILTQVKQHQQQKALPSGPPQS 576
>gi|403297205|ref|XP_003939469.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 351
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 147/326 (45%), Gaps = 64/326 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH- 360
+ ++ ++P K +P P+S P + G ++ A H P + + LH
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH-------PDQLTKLHQ 246
Query: 361 -GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
M TP+ P+ G +++ PP E++ + IG +IG+ G
Sbjct: 247 LAMQQTPFPPLGQTNPAFPG---LDASPPASTHELTIPNDL--------IGCIIGRQGTK 295
Query: 420 VKQLQQETGASIHVEDAPTDSDERVI 445
+ +++Q +GA I + +A S ER I
Sbjct: 296 INEIRQMSGAQIKIANATEGSSERQI 321
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 44/250 (17%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 219
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD------DNENSTITA 242
A + + PH D L K+H +++ F + + D T
Sbjct: 220 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDASPPASTH 276
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
L +PN+++GC++G++G I +R +GA I++ A +++ + I+G P
Sbjct: 277 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----GSSERQITITGTPANIS 331
Query: 303 RALYEVSTLL 312
A Y ++ L
Sbjct: 332 LAQYLINARL 341
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 95
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 275 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 327
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 328 ANISLAQYLINARLTS 343
>gi|403287927|ref|XP_003935171.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Saimiri boliviensis boliviensis]
Length = 579
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQGSPGSVFKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ + A +
Sbjct: 375 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSV 417
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 472
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 473 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 523
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 91/206 (44%), Gaps = 39/206 (18%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT-IPGSEERVIIIYSSPTKIA 185
+TV+ + P+ +G +IGK G +K L A I +A P ++ R++II P
Sbjct: 406 ETVH-LFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQF 464
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
K Q + ++ +I EE+ E + A +
Sbjct: 465 KAQGR-------------------------IYGKIKEENFVS------PKEEVKLEAHIR 493
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---KPNVAK 302
VP+ G ++GK G + L++ + A + V+P D+ P N +V+I+G VA+
Sbjct: 494 VPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP--DENDQVVVKITGHFYACQVAQ 550
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQA 328
R + E+ T + Q+ ++ PS PQ+
Sbjct: 551 RKIQEILTQVKQHQQQKALPSGPPQS 576
>gi|281360685|ref|NP_001162717.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|272506050|gb|ACZ95252.1| IGF-II mRNA-binding protein, isoform J [Drosophila melanogaster]
gi|383873394|gb|AFH55503.1| FI20063p1 [Drosophila melanogaster]
Length = 580
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 193/456 (42%), Gaps = 83/456 (18%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G + AD RIL S +G +IG+ G+ ++++ ++++A++ V + + GS E+ I IY
Sbjct: 78 GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV-GSLEKSITIY 136
Query: 179 SSP-------TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMAS 231
+P +I + ++ A T K + P C
Sbjct: 137 GNPENCTNACKRILEVMQQE---AISTNKGELSPEC------------------------ 169
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
S I ++L NN++G ++GK G+ I+R+ +T I V + + + N + +
Sbjct: 170 ------SEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--NSFNLERI 221
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSS 351
+ + G RA ++ST L Q+ D QA Q+ P +HP+ S
Sbjct: 222 ITVKGLIENMSRAENQISTKLRQSYENDL------QAMAPQSLMFP-----GLHPMAMMS 270
Query: 352 WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGG 411
P +GM M Q M + PP ++ + I +A +G
Sbjct: 271 TPG-----NGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNA--VGA 323
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTDSDE--------RVIRASAFEGLWNPRSQTIDA 463
+IG G +++ + + + AS+ + AP D+D+ +V EG W + +
Sbjct: 324 IIGTRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEK 381
Query: 464 ILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARV 520
+ + F ++ +T LLV SS+VG I+G+GG + E++R T + I++
Sbjct: 382 M-----REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL--PEH 434
Query: 521 KLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS 556
L P G E V I G + SA ++ M S
Sbjct: 435 ALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLS 470
>gi|338723967|ref|XP_001497902.3| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Equus caballus]
Length = 638
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 178/411 (43%), Gaps = 74/411 (18%)
Query: 114 SSREQSFGNS---QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G++ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 237 SSRQGSPGSASKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 296
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 297 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 334
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 335 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 382
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ I G +A E+ + + S+ N + P +++ LG
Sbjct: 383 RTITIKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 432
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G S + P Q + S ++ + A +
Sbjct: 433 -LFPPTS----GMP-----------PPTSGPPSAMTPPYPQFEQQSETETVHLFIPALSV 476
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 477 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 531
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 532 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 582
>gi|395830897|ref|XP_003788549.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Otolemur garnettii]
Length = 579
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ + A +
Sbjct: 375 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSV 417
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 472
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 473 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 523
>gi|297735516|emb|CBI17956.3| unnamed protein product [Vitis vinifera]
Length = 433
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 29/192 (15%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P + V+R+L P +K+G +IG+ G +K L EET+A+I + D PG+ ER +++
Sbjct: 37 PGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMV------- 89
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI--IEEDLFGGMASDDDNENSTITA 242
K+E P A D LL+VH I +E D+ ++
Sbjct: 90 ------------SAKEEPDAPIAPAIDGLLRVHKCIMDVESDV-------PSAAGVMVST 130
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
RLLV G L+GK+G I+ ++ + +RVL + LP A+ D +V+I G+P
Sbjct: 131 RLLVVAAQAGSLIGKQGATIKSIQEASNCIVRVL-GENLPLFALQNDTVVEIQGEPASVH 189
Query: 303 RALYEVSTLLHQ 314
+A+ +++ L +
Sbjct: 190 KAVELIASNLRK 201
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 129/273 (47%), Gaps = 39/273 (14%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E ++L K+G +IG+ G ++K+L +ET A I + D P + ER + SA E
Sbjct: 38 GENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDA 97
Query: 456 PRSQTIDAILQLQNKTSEF-----SEKGT-ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
P + ID +L++ + S G ++TRLLV +++ G ++G+ G I ++ +
Sbjct: 98 PIAPAIDGLLRVHKCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEAS 157
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG--SSEH----LISAHGTYQSFMTSGQSMKVQ 563
+RV+G + L ++ +V+I+G +S H LI+++ + F+ +KV
Sbjct: 158 NCIVRVLGENLPL---FALQNDTVVEIQGEPASVHKAVELIASN--LRKFLVDRSVIKVF 212
Query: 564 PSSYQNINPQQSSCQTMSSHQ----SSYQNMNTQQSPYHRVNAQ--QSPYQ--NINPQQS 615
Q N Q + + M Q S +NT P N Q Q PYQ N P +
Sbjct: 213 EMEMQKPNTQGN--ENMPPQQSWDPSQVFPINTGGEPGFVPNLQYMQPPYQLDNYYPPPA 270
Query: 616 SYPM---HTHQ--------GAG-TNPHITPTQS 636
P+ H HQ GAG ++P +TP QS
Sbjct: 271 QTPLDQHHHHQGPPYGRETGAGVSSPSLTPQQS 303
>gi|73976012|ref|XP_539474.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 1 [Canis lupus familiaris]
Length = 579
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ + A +
Sbjct: 375 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSV 417
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 472
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 473 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 523
>gi|25012807|gb|AAN71494.1| RE72930p [Drosophila melanogaster]
Length = 580
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 108/456 (23%), Positives = 193/456 (42%), Gaps = 83/456 (18%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G + AD RIL S +G +IG+ G+ ++++ ++++A++ V + + GS E+ I IY
Sbjct: 78 GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV-GSLEKSITIY 136
Query: 179 SSP-------TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMAS 231
+P +I + ++ A T K + P C
Sbjct: 137 GNPENCTNACKRILEVMQQE---AISTNKGELSPEC------------------------ 169
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
S I ++L NN++G ++GK G+ I+R+ +T I V + + + N + +
Sbjct: 170 ------SEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--NSFNLERI 221
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSS 351
+ + G RA ++ST L Q+ D QA Q+ P +HP+ S
Sbjct: 222 ITVKGLIENMSRAENQISTKLRQSYENDL------QAIAPQSLMFP-----GLHPMAMMS 270
Query: 352 WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGG 411
P +GM M Q M + PP ++ + I +A +G
Sbjct: 271 TPG-----NGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNA--VGA 323
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTDSDE--------RVIRASAFEGLWNPRSQTIDA 463
+IG G +++ + + + AS+ + AP D+D+ +V EG W + +
Sbjct: 324 IIGTRGSHIRSIMRFSNASLKI--APLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEK 381
Query: 464 ILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARV 520
+ + F ++ +T LLV SS+VG I+G+GG + E++R T + I++
Sbjct: 382 M-----REEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL--PEH 434
Query: 521 KLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS 556
L P G E V I G + SA ++ M S
Sbjct: 435 ALAPPSGGDEETPVHIIGLFYSVQSAQRRIRAMMLS 470
>gi|109067156|ref|XP_001098422.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 3 [Macaca mulatta]
gi|402863939|ref|XP_003896249.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Papio anubis]
Length = 579
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ + A +
Sbjct: 375 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSV 417
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 472
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 473 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 523
>gi|301771918|ref|XP_002921377.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ailuropoda melanoleuca]
Length = 579
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ + A +
Sbjct: 375 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSV 417
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 472
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 473 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 523
>gi|30795212|ref|NP_006538.2| insulin-like growth factor 2 mRNA-binding protein 3 [Homo sapiens]
gi|114612360|ref|XP_001157593.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 4 [Pan troglodytes]
gi|397472938|ref|XP_003807987.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3 [Pan
paniscus]
gi|254763311|sp|O00425.2|IF2B3_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=KH
domain-containing protein overexpressed in cancer;
Short=hKOC; AltName: Full=VICKZ family member 3
gi|4191612|gb|AAD09828.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|40807047|gb|AAH65269.1| Insulin-like growth factor 2 mRNA binding protein 3 [Homo sapiens]
gi|51095013|gb|EAL24257.1| IGF-II mRNA-binding protein 3 [Homo sapiens]
gi|119614193|gb|EAW93787.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Homo sapiens]
gi|261861412|dbj|BAI47228.1| insulin-like growth factor 2 mRNA binding protein 3 [synthetic
construct]
gi|410216456|gb|JAA05447.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410260770|gb|JAA18351.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410287810|gb|JAA22505.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
gi|410334615|gb|JAA36254.1| insulin-like growth factor 2 mRNA binding protein 3 [Pan
troglodytes]
Length = 579
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ + A +
Sbjct: 375 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSV 417
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 472
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 473 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 523
>gi|307196422|gb|EFN78011.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Harpegnathos
saltator]
Length = 647
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 105/432 (24%), Positives = 187/432 (43%), Gaps = 63/432 (14%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G+ + D RIL S +G +IG+ G+ ++ + + ++A++ V D + GS E+ I IY
Sbjct: 136 GSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNV-GSLEKAITIY 194
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P D+ K+ +E + K +D D G + S +
Sbjct: 195 GNP-----------DNCTNACKKILEVMQQEANNTNKGYDEGSNSDDHGAVNSYE----- 238
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
IT ++L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G
Sbjct: 239 -ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDI--NSFNLERIITVKGTI 295
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS 358
+A +S+ L Q+ D + PQ+ H PMA M G + +R
Sbjct: 296 ENMSKAESMISSKLRQSYENDLQAMA-PQSMMFPGLH----PMAMMSTAG-MGYSSRGPG 349
Query: 359 LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
L+G P+ P + + P E + + +G +IG G
Sbjct: 350 LYGSGPAPY-------PYQSSLQTQQGVPASDTQETTF-----LYIPNNSVGAIIGTKGS 397
Query: 419 NVKQLQQETGASIHVEDAPTDSD----ERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF 474
+++ + + +GAS+ + AP + D ++ R G +P SQ L + E
Sbjct: 398 HIRNIIRFSGASVKI--APLEQDKPAEQQTERKVTIVG--SPESQWKAQYLIFEKMREEG 453
Query: 475 SEKGT----ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQD----PH 526
GT +T +LVPS++VG I+G+GG + E++ RV G+ +KL + P
Sbjct: 454 YVSGTEDVRLTIEILVPSAQVGRIIGKGGQNVRELQ-------RVTGSVIKLSEQQATPP 506
Query: 527 PGSSECIVDIRG 538
E V I G
Sbjct: 507 SADEETTVHIIG 518
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 34/228 (14%)
Query: 111 WSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTI 167
+ S G + +IL + IG +IGK GN +K + ++T KITV+ D
Sbjct: 222 YDEGSNSDDHGAVNSYEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDIN 281
Query: 168 PGSEERVIIIYSSPTKIAKT---------QNKDDDSAAETKKESMEP--HCAAQDALLKV 216
+ ER+I + + ++K Q+ ++D A + M P H A + +
Sbjct: 282 SFNLERIITVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHPMAMMSTAGM 341
Query: 217 HDRIIEEDLFG----------------GMASDDDNENSTITARLLVPNNMVGCLLGKRGD 260
L+G G+ + D E T L +PNN VG ++G +G
Sbjct: 342 GYSSRGPGLYGSGPAPYPYQSSLQTQQGVPASDTQE----TTFLYIPNNSVGAIIGTKGS 397
Query: 261 VIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
I+ + +GA++++ P ++ P T+ V I G P +A Y +
Sbjct: 398 HIRNIIRFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI 445
>gi|384490263|gb|EIE81485.1| hypothetical protein RO3G_06190 [Rhizopus delemar RA 99-880]
Length = 426
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 89/349 (25%), Positives = 155/349 (44%), Gaps = 68/349 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R L + G +IGK G V +R+ + A++ ++D +PG+ ER++ + + +AK
Sbjct: 82 RSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNISDIVPGAAERILTVVGPVSAVAK---- 137
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN---STITARLLVP 247
A V ++IIEE+ +DN+ +T ++L+
Sbjct: 138 ---------------------AYALVAEKIIEENTLA-----EDNKGPIQQDVTIKILIL 171
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
N +G ++GK G VI+ ++ +GA + + + P ++T+ +V I G P+ ++A+ +
Sbjct: 172 ANRMGSIIGKSGSVIRSIQETSGAKV----SAQEEPLPLSTERVVTIHGTPDAIEQAVKK 227
Query: 308 VSTLL------HQNPRKDKP-------PSSFPQAYGGQNF-----------HSPPAPMAD 343
+ +L H N KP SS G +N+ H+ P A
Sbjct: 228 IGDILVDQPNHHGNYMLYKPIAGAAPHTSSSNHGNGHRNYRRSNDNNNAASHAMPTAAAA 287
Query: 344 MHPLGNSSWPARNSSLHGM--PSTPWMGG----YGDQPSRMGSGSINSCPPGQMGEVS-A 396
+ P N S++G P T + GG GD P M G N G + + A
Sbjct: 288 AMMGYSGMLPMGNMSMNGFYYPPTNYPGGSGGRQGDYPLPMMPGLSNLSMMGGLSNMMPA 347
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
S +I +G +IGKGG + +++Q +G+ I + D TDS ER+I
Sbjct: 348 TQSQQIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIADPSTDSHERLI 396
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 81/164 (49%), Gaps = 21/164 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR----A 447
G ++ S++ L G +IGKGG NV +++ + A +++ D + ER++
Sbjct: 73 GMIAGNISLRSLVGMKDAGLIIGKGGKNVSEIRDSSMARVNISDIVPGAAERILTVVGPV 132
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI----TTRLLVPSSKVGCILGQGGHVIN 503
SA + ++ I ++ T KG I T ++L+ ++++G I+G+ G VI
Sbjct: 133 SAVAKAYALVAEKI-----IEENTLAEDNKGPIQQDVTIKILILANRMGSIIGKSGSVIR 187
Query: 504 EMRRRTQADIRVVGARVKLQ-DPHPGSSECIVDIRGSSEHLISA 546
++ + GA+V Q +P P S+E +V I G+ + + A
Sbjct: 188 SIQETS-------GAKVSAQEEPLPLSTERVVTIHGTPDAIEQA 224
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 43/68 (63%), Gaps = 1/68 (1%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT-IPGSEERVIIIYSSPTKIA 185
D +IL + ++G +IGK+G++++S++E + AK++ + +P S ERV+ I+ +P I
Sbjct: 163 DVTIKILILANRMGSIIGKSGSVIRSIQETSGAKVSAQEEPLPLSTERVVTIHGTPDAIE 222
Query: 186 KTQNKDDD 193
+ K D
Sbjct: 223 QAVKKIGD 230
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + ++ +P+ VGCI+G+GG INE+R+ + G+ +K+ DP S E ++ I G
Sbjct: 348 TQSQQIYIPNEMVGCIIGKGGMKINEIRQTS-------GSHIKIADPSTDSHERLITITG 400
Query: 539 SSE 541
+ E
Sbjct: 401 TPE 403
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 111 WSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS 170
SN S N PA +I P+ +G +IGK G + +R+ + + I +AD S
Sbjct: 332 LSNLSMMGGLSNMMPATQSQQIYIPNEMVGCIIGKGGMKINEIRQTSGSHIKIADPSTDS 391
Query: 171 EERVIIIYSSP 181
ER+I I +P
Sbjct: 392 HERLITITGTP 402
>gi|332242549|ref|XP_003270447.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Nomascus leucogenys]
Length = 579
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 172/403 (42%), Gaps = 72/403 (17%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIII 177
S +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I I
Sbjct: 187 SLSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITI 246
Query: 178 YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN 237
S+P + +A ++ E M H AQD + EE
Sbjct: 247 LSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE-------------- 276
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
I ++L NN VG L+GK G ++++ +T I + P L N + + + G
Sbjct: 277 --IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGS 332
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
+A E+ + + S+ N + P +++ LG +P +
Sbjct: 333 VETCAKAEEEIMKKIRE---------SYENDIASMNVQTHLIPGLNLNDLG--LFPPTS- 380
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
GMP P G PS M PP E S ++ + A +G +IGK G
Sbjct: 381 ---GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSVGAIIGKQG 425
Query: 418 FNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-- 475
++KQL + GASI + AP ++ + +R G P A ++ K E +
Sbjct: 426 QHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYGKIKEENFV 480
Query: 476 ---EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 481 SPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 523
>gi|432110248|gb|ELK34019.1| Poly(rC)-binding protein 3 [Myotis davidii]
Length = 347
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 95/397 (23%), Positives = 161/397 (40%), Gaps = 89/397 (22%)
Query: 58 LFSISFSCAFHLLSHSRCIRFCCIMDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSRE 117
+FS+ SCAF + I I+ F F RK + +G +
Sbjct: 1 MFSVISSCAFFFPGDT--IWAPSILPLGTLGTFSHHLQTHFGRKMESKVSEGGLN----- 53
Query: 118 QSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIII 177
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I
Sbjct: 54 --------VTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI 103
Query: 178 YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDD 234
+ PT DA+ K I EED+ M++
Sbjct: 104 -TGPT----------------------------DAIFKAFAMIAYKFEEDIINSMSNSPA 134
Query: 235 NENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
+T RL+VP + G L+GK G I+ +R TGA ++V D LP +T+ V I
Sbjct: 135 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTI 190
Query: 295 SGKPNVAKRALYEVSTLLHQNPRKDKP------PSSFPQAYGGQNFHSPPAPMADMHPLG 348
SG P+ + + ++ ++ ++P K P+S P + G ++ A HP
Sbjct: 191 SGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHP-- 248
Query: 349 NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGK 408
+ S H + P+ S +++ PP E++ +
Sbjct: 249 -------DVSFHFV-CLPF------------SSCLDASPPASTHELTIPNDL-------- 280
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 281 IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 317
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 50 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 102
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 103 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 161
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 162 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 198
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 106/233 (45%), Gaps = 24/233 (10%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 111 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 169
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETK-KESMEPH--------- 206
A++ VA D +P S ER + I +P I + + E+ K + P+
Sbjct: 170 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 229
Query: 207 --CAAQDALLKVHDRIIEEDL---FGGM--ASDDDNENSTITARLLVPNNMVGCLLGKRG 259
Q ++ I D+ F + +S D T L +PN+++GC++G++G
Sbjct: 230 IFAGGQAYTIQGQYAIPHPDVSFHFVCLPFSSCLDASPPASTHELTIPNDLIGCIIGRQG 289
Query: 260 DVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
I +R +GA I++ A +++ + I+G P A Y ++ L
Sbjct: 290 TKINEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 337
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 13/77 (16%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS- 539
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 271 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 323
Query: 540 -----SEHLISAHGTYQ 551
+++LI+A T +
Sbjct: 324 ANISLAQYLINARLTSE 340
>gi|58865460|ref|NP_001011945.1| poly(rC)-binding protein 3 [Rattus norvegicus]
gi|50927011|gb|AAH79196.1| Poly(rC) binding protein 3 [Rattus norvegicus]
Length = 319
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 147/326 (45%), Gaps = 64/326 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH- 360
+ ++ ++P K +P P+S P + G ++ A H P + + LH
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPH-------PDQLTKLHQ 214
Query: 361 -GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
M TP+ P+ G +++ PP E++ + IG +IG+ G
Sbjct: 215 LAMQQTPFPPLGQTNPAFPG---LDASPPASTHELTIPNDL--------IGCIIGRQGTK 263
Query: 420 VKQLQQETGASIHVEDAPTDSDERVI 445
+ +++Q +GA I + +A S ER I
Sbjct: 264 INEIRQMSGAQIKIANATEGSSERQI 289
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 44/250 (17%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 187
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD------DNENSTITA 242
A + + PH D L K+H +++ F + + D T
Sbjct: 188 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDASPPASTH 244
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
L +PN+++GC++G++G I +R +GA I++ A +++ + I+G P
Sbjct: 245 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----GSSERQITITGTPANIS 299
Query: 303 RALYEVSTLL 312
A Y ++ L
Sbjct: 300 LAQYLINARL 309
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 63
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 64 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 100
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 243 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 295
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 296 ANISLAQYLINARLTS 311
>gi|328723977|ref|XP_001952825.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Acyrthosiphon pisum]
Length = 563
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 127/511 (24%), Positives = 220/511 (43%), Gaps = 98/511 (19%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
+R+ I++ + + GN Q + RIL S +G +IG+ G+ ++ + ++T
Sbjct: 119 MERRNRSAIRQRTYGAPGATPTIGNRQ-TEFPLRILVHSDMVGAIIGRGGSTIRQITQQT 177
Query: 158 QAKITV--ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLK 215
+A++ V D + GS E+ I IY +P E+ C +L+
Sbjct: 178 RARVDVHRKDNV-GSLEKAITIYGNP-------------------ENCTNAC---RKILE 214
Query: 216 VHDRIIEEDLFGGMASDDDNEN-STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIR 274
V M + N N S + ++L NN++G ++GK G+ I+R+ SET I
Sbjct: 215 V------------MQQEATNTNKSDVILKILAHNNLIGRIIGKEGNTIKRIMSETETKIT 262
Query: 275 VLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNF 334
V + + + N + ++ + G +A ++S L Q+ D S PQ
Sbjct: 263 VSSINDI--NSFNYERIITVKGSIENMSKAEAQISAKLRQSFENDL-QSMAPQTVMFPGL 319
Query: 335 HSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEV 394
H PMA M G ++P R G P T + M +I P +V
Sbjct: 320 H----PMAMMSATG-ITYPGR-----GGP-TSYQQFAPAPYPPMYPSTIPPINPALAADV 368
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
+ I SA +G +IG G N++ + + +GAS+ V A T+++++ + +A G
Sbjct: 369 QETAFLFIPNSA--VGAIIGTKGSNIRSMIRFSGASVKV--ASTENEKQGVVGNA--GDA 422
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGTI------------------TTRLLVPSSKVGCILG 496
N Q + + S++ +G I T +LVPSS+VG I+G
Sbjct: 423 NSAQQASRKVTIVGTADSQWKAQGMIFDKLRDEGFVPNNEEVRLTVEILVPSSQVGRIIG 482
Query: 497 QGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI-------SAHGT 549
+GG + E++ RV G+ +KL P GS++ D ++ H+I SA
Sbjct: 483 RGGSNVRELQ-------RVTGSIIKL--PTQGSTDGTEDT--TTVHIIGHFLATQSAQRR 531
Query: 550 YQSFMTSGQSMKVQP---SSYQNINPQQSSC 577
+S + SG + +P +S PQQ+ C
Sbjct: 532 IRSMVASGANPVPRPQQRNSRPTETPQQAGC 562
>gi|395738667|ref|XP_003780758.1| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2
mRNA-binding protein 3 [Pongo abelii]
Length = 567
Score = 91.3 bits (225), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 167 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 226
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 227 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 264
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 265 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 312
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 313 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 362
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ + A +
Sbjct: 363 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSV 405
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 406 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 460
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 461 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 511
>gi|426227471|ref|XP_004007841.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 1 [Ovis aries]
Length = 580
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 97/403 (24%), Positives = 171/403 (42%), Gaps = 71/403 (17%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIII 177
S +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I I
Sbjct: 187 SVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITI 246
Query: 178 YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN 237
S+P + +A ++ E M H AQD + EE
Sbjct: 247 LSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE-------------- 276
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
I ++L NN VG L+GK G ++++ +T I + P L N + + + G
Sbjct: 277 --IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGN 332
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
+A E+ + + S+ N + P +++ LG +P +
Sbjct: 333 VETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG--LFPPTS- 380
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
GMP P G S + P Q + S ++ + A +G +IGK G
Sbjct: 381 ---GMP-----------PPTSGPPSAMTPPYPQFEQQSETETVHLFIPALSVGAIIGKQG 426
Query: 418 FNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-- 475
++KQL + GASI + AP ++ + +R G P A ++ K E +
Sbjct: 427 QHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYGKIKEENFV 481
Query: 476 ---EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 482 SPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 524
>gi|356562072|ref|XP_003549298.1| PREDICTED: poly(rC)-binding protein 3-like [Glycine max]
Length = 436
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 157/348 (45%), Gaps = 58/348 (16%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P V+R++ P K+G +IG+ G ++K EET+A+I V D G+ +R+++I
Sbjct: 43 PGHCVFRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISG----- 97
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI---T 241
K+E P A +A+++V R+ G D +N+ S + +
Sbjct: 98 --------------KEEPEAPLSPAMNAVIRVFKRV-----SGFSEIDAENKASAVAFCS 138
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
RLLV + L+GK+G +I+ ++ TGA++RVL D +P A + +V++ G+
Sbjct: 139 VRLLVASTQAINLIGKQGSLIKSIQENTGASVRVLSGDEVPFYAAADERIVELQGEAMKV 198
Query: 302 KRALYEVSTLLHQNPRKDKPPSSFPQAYGGQ---------------NFHSP--PAPMADM 344
+AL V L + + F + Y + HS P+ + D+
Sbjct: 199 LKALEAVVGHLRKFLVDNSVLPLFEKTYNATISQEHQADTTWVDKPSLHSASQPSIVTDL 258
Query: 345 HPLG---NSSWPARNSSLHGMPSTPWMGGYGDQPS----RMGSGSINSCPPGQMGEVSAE 397
PL +S + R S L + M YG S R + S S PP +
Sbjct: 259 -PLSTKRDSLFADRESQLDSLLPPSTMSIYGQDSSLSGLRSSALSRPSAPPIVTTVIQ-- 315
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+M+I S + +IG G N++ ++ +GA + V+++P DE ++
Sbjct: 316 -TMQIPLSYAE--DIIGIQGTNIEYIRCTSGAILTVQESPV-PDEIIV 359
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/194 (23%), Positives = 91/194 (46%), Gaps = 17/194 (8%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G +K+ +ET A I V D + +R++ S E P S
Sbjct: 48 FRLIVPVLKVGSIIGRKGELIKKTCEETKARIRVLDGAVGTSDRIVLISGKEEPEAPLSP 107
Query: 460 TIDAILQLQNKTSEFSEKGT---------ITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
++A++++ + S FSE + RLLV S++ ++G+ G +I ++ T
Sbjct: 108 AMNAVIRVFKRVSGFSEIDAENKASAVAFCSVRLLVASTQAINLIGKQGSLIKSIQENTG 167
Query: 511 ADIRVV-GARVKLQDPHPGSSECIVDIRGSSEHLISAH----GTYQSFMTSGQSMKVQPS 565
A +RV+ G V + + E IV+++G + ++ A G + F+ + +
Sbjct: 168 ASVRVLSGDEVPF---YAAADERIVELQGEAMKVLKALEAVVGHLRKFLVDNSVLPLFEK 224
Query: 566 SYQNINPQQSSCQT 579
+Y Q+ T
Sbjct: 225 TYNATISQEHQADT 238
>gi|300796214|ref|NP_001179217.1| insulin-like growth factor 2 mRNA-binding protein 3 [Bos taurus]
gi|296488613|tpg|DAA30726.1| TPA: insulin-like growth factor 2 mRNA binding protein 3 [Bos
taurus]
Length = 580
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 101/411 (24%), Positives = 177/411 (43%), Gaps = 74/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G S + P Q + S ++ + A +
Sbjct: 375 -LFPPTS----GMP-----------PPTSGPPSAITPPYPQFEQQSETETVHLFIPALSV 418
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 419 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 473
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 474 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 524
>gi|395536911|ref|XP_003770452.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Sarcophilus
harrisii]
Length = 318
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/326 (26%), Positives = 146/326 (44%), Gaps = 65/326 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH- 360
+ ++ ++P K +P P+S P + G ++ A HP + LH
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHP--------DLTKLHQ 213
Query: 361 -GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
M TP+ P+ G +++ PP E++ + IG +IG+ G
Sbjct: 214 LAMQQTPFPPLGQTTPAFPG---LDASPPASTHELTIPNDL--------IGCIIGRQGTK 262
Query: 420 VKQLQQETGASIHVEDAPTDSDERVI 445
+ +++Q +GA I + +A S ER I
Sbjct: 263 INEIRQMSGAQIKIANATEGSSERQI 288
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++ +
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT 65
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + D I + N T+ + K +T RL+VP+S+ G ++G+GG I
Sbjct: 66 DAIFKAFAMIAYKFEE--DIINSMSNSTA--TSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 122 EIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/246 (24%), Positives = 105/246 (42%), Gaps = 37/246 (15%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAET-----------KKESMEP 205
A++ VA D +P S ER + I +P I + + E+ K S
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 187
Query: 206 HCAAQDA-------------LLKVHDRIIEEDLFGGMASDD------DNENSTITARLLV 246
A A L K+H +++ F + D T L +
Sbjct: 188 IFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTTPAFPGLDASPPASTHELTI 247
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
PN+++GC++G++G I +R +GA I++ A +++ + I+G P A Y
Sbjct: 248 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQY 302
Query: 307 EVSTLL 312
++ L
Sbjct: 303 LINARL 308
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 49
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 242 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 294
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 295 ANISLAQYLINARLTS 310
>gi|410952456|ref|XP_003982896.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Felis catus]
Length = 580
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 96/403 (23%), Positives = 170/403 (42%), Gaps = 71/403 (17%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIII 177
S +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I I
Sbjct: 187 SISKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITI 246
Query: 178 YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN 237
S+P + +A ++ E M H AQD + EE
Sbjct: 247 LSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE-------------- 276
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
I ++L NN VG L+GK G ++++ +T I + P L N + + + G
Sbjct: 277 --IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGN 332
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
+A E+ + + S+ N + P +++ LG +P +
Sbjct: 333 VETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG--LFPPTS- 380
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
GMP P G S + P Q + ++ + A +G +IGK G
Sbjct: 381 ---GMP-----------PPTSGPPSAMTPPYPQFEQAPETETVHLFIPALSVGAIIGKQG 426
Query: 418 FNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-- 475
++KQL + GASI + AP ++ + +R G P A ++ K E +
Sbjct: 427 QHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYGKIKEENFV 481
Query: 476 ---EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 482 SPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 524
>gi|119614192|gb|EAW93786.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_a
[Homo sapiens]
Length = 422
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 22 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 81
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 82 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 119
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 120 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 167
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 168 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 217
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ + A +
Sbjct: 218 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSV 260
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 261 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 315
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 316 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 366
>gi|344270303|ref|XP_003406985.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Loxodonta africana]
Length = 492
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/403 (24%), Positives = 172/403 (42%), Gaps = 72/403 (17%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIII 177
S +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I I
Sbjct: 100 SVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITI 159
Query: 178 YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN 237
S+P + +A ++ E M H AQD + EE
Sbjct: 160 LSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE-------------- 189
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
I ++L NN VG L+GK G ++++ +T I + P L N + + + G
Sbjct: 190 --IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGS 245
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
+A E+ + + S+ N + P +++ LG +P +
Sbjct: 246 VETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG--LFPPTS- 293
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
GMP P G PS M PP E S ++ + A +G +IGK G
Sbjct: 294 ---GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSVGAIIGKQG 338
Query: 418 FNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-- 475
++KQL + GASI + AP ++ + +R G P A ++ K E +
Sbjct: 339 QHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYGKIKEENFV 393
Query: 476 ---EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 394 SPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 436
>gi|359479585|ref|XP_002275698.2| PREDICTED: uncharacterized protein LOC100266515 [Vitis vinifera]
Length = 858
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 96/192 (50%), Gaps = 29/192 (15%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P + V+R+L P +K+G +IG+ G +K L EET+A+I + D PG+ ER +++
Sbjct: 37 PGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMV------- 89
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI--IEEDLFGGMASDDDNENSTITA 242
K+E P A D LL+VH I +E D+ ++
Sbjct: 90 ------------SAKEEPDAPIAPAIDGLLRVHKCIMDVESDVPSAAG-------VMVST 130
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
RLLV G L+GK+G I+ ++ + +RVL + LP A+ D +V+I G+P
Sbjct: 131 RLLVVAAQAGSLIGKQGATIKSIQEASNCIVRVL-GENLPLFALQNDTVVEIQGEPASVH 189
Query: 303 RALYEVSTLLHQ 314
+A+ +++ L +
Sbjct: 190 KAVELIASNLRK 201
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 132/277 (47%), Gaps = 33/277 (11%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E ++L K+G +IG+ G ++K+L +ET A I + D P + ER + SA E
Sbjct: 38 GENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDA 97
Query: 456 PRSQTIDAILQLQNKTSEF-----SEKGT-ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
P + ID +L++ + S G ++TRLLV +++ G ++G+ G I ++ +
Sbjct: 98 PIAPAIDGLLRVHKCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEAS 157
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG--SSEH----LISAHGTYQSFMTSGQSMKVQ 563
+RV+G + L ++ +V+I+G +S H LI+++ + F+ +KV
Sbjct: 158 NCIVRVLGENLPL---FALQNDTVVEIQGEPASVHKAVELIASN--LRKFLVDRSVIKVF 212
Query: 564 PSSYQNINPQQSSCQTMSSHQSSYQN----MNTQQSPYHRVNAQ--QSPYQ--NINPQQS 615
Q N Q + + M QS + +NT P N Q Q PYQ N P +
Sbjct: 213 EMEMQKPNTQGN--ENMPPQQSWDPSQVFPINTGGEPGFVPNLQYMQPPYQLDNYYPPPA 270
Query: 616 SYPM---HTHQG--AGTNPHITPTQSS-YYSSSAQQG 646
P+ H HQG G +T T++ ++ S+ QG
Sbjct: 271 QTPLDQHHHHQGPPYGRETDVTFTENKPFFHKSSLQG 307
>gi|73976022|ref|XP_863341.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 7 [Canis lupus familiaris]
Length = 580
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 176/411 (42%), Gaps = 74/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G S + P Q + ++ + A +
Sbjct: 375 -LFPPTS----GMP-----------PPTSGPPSAMTPPYPQFEQAPQTETVHLFIPALSV 418
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 419 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 473
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 474 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 524
>gi|321455006|gb|EFX66153.1| hypothetical protein DAPPUDRAFT_2216 [Daphnia pulex]
Length = 388
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 115/444 (25%), Positives = 190/444 (42%), Gaps = 79/444 (17%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIYSSPTKI 184
D R+L S +G +IG+ G ++ + ++T+A++ V + + GS E+ I IY +P
Sbjct: 10 DFPLRVLVASEMVGAIIGRQGGTIRQITQQTRARVDVHRKENV-GSLEKAITIYGNP--- 65
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN-STITAR 243
E+ C R++E M + DN N I+ +
Sbjct: 66 ----------------ENCTNAC----------RRVLEV-----MQQEADNTNKGEISLK 94
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+L NN++G ++GK G I+R+ ET I V + + + N + ++ I G + R
Sbjct: 95 ILAHNNLIGRIIGKGGSTIKRVMLETETKITVSSLNDV--SSFNMERVITIKGTIDNMSR 152
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
A +S L Q+ D + PQ+ H PMA M +G P S+ G P
Sbjct: 153 AEGMISAKLRQSYESDLQAMA-PQSMMFPGLH----PMAMMSTVGMGFSP----SVRGTP 203
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
G Y G+ P +GE S + I SA +G +IG G +++ +
Sbjct: 204 PAAAPGMYPP-----GAAPYAQAGPAGVGETSFLY---IPNSA--VGAIIGTRGSHIRNI 253
Query: 424 QQETGASIHVEDAP--TDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSE----FSEK 477
+ +GAS+ + P T ++ + R G P +Q L + E E
Sbjct: 254 IRFSGASVKITSLPEGTTAEPQAERKVTIVG--TPEAQWKAQYLIFEKMREEGFMPAGED 311
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSS---ECIV 534
+T LLV SS+VG I+G+GG + EM+R T + I++ P G+S E V
Sbjct: 312 VRLTVELLVASSQVGRIIGKGGQNVREMQRTTSSVIKL---------PEQGASTGEETTV 362
Query: 535 DIRGSSEHLISAHGTYQSFMTSGQ 558
I G+ + SA ++ M+ Q
Sbjct: 363 HIIGNFFAVQSAQRRIRAMMSQQQ 386
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/184 (23%), Positives = 91/184 (49%), Gaps = 17/184 (9%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERVIRASAFEGLWN 455
+F +++L ++ +G +IG+ G ++Q+ Q+T A + V S E+ I N
Sbjct: 10 DFPLRVLVASEMVGAIIGRQGGTIRQITQQTRARVDVHRKENVGSLEKAITI-----YGN 64
Query: 456 PRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
P + T +L++ + ++ + KG I+ ++L ++ +G I+G+GG I + T+ I
Sbjct: 65 PENCTNACRRVLEVMQQEADNTNKGEISLKILAHNNLIGRIIGKGGSTIKRVMLETETKI 124
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSYQ 568
V L D + E ++ I+G+ +++ A G QS+ + Q+M Q +
Sbjct: 125 TV----SSLNDVSSFNMERVITIKGTIDNMSRAEGMISAKLRQSYESDLQAMAPQSMMFP 180
Query: 569 NINP 572
++P
Sbjct: 181 GLHP 184
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 46/230 (20%), Positives = 90/230 (39%), Gaps = 31/230 (13%)
Query: 110 NWSNSSR------EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
N +N+ R +Q N+ + +IL + IG +IGK G+ +K + ET+ KITV
Sbjct: 67 NCTNACRRVLEVMQQEADNTNKGEISLKILAHNNLIGRIIGKGGSTIKRVMLETETKITV 126
Query: 164 A---DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI 220
+ D + ERVI I + +++ + ++ + ++ +H
Sbjct: 127 SSLNDVSSFNMERVITIKGTIDNMSRAEGMISAKLRQSYESDLQAMAPQSMMFPGLHPMA 186
Query: 221 IEEDLFGGMA----------------------SDDDNENSTITARLLVPNNMVGCLLGKR 258
+ + G + + T+ L +PN+ VG ++G R
Sbjct: 187 MMSTVGMGFSPSVRGTPPAAAPGMYPPGAAPYAQAGPAGVGETSFLYIPNSAVGAIIGTR 246
Query: 259 GDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
G I+ + +GA++++ + V I G P +A Y +
Sbjct: 247 GSHIRNIIRFSGASVKITSLPEGTTAEPQAERKVTIVGTPEAQWKAQYLI 296
>gi|348564372|ref|XP_003467979.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cavia porcellus]
Length = 741
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 179/411 (43%), Gaps = 76/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 342 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 401
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 402 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 439
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 440 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 487
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 488 RTITVKGSVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 537
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P+ SG ++ PP E S ++ + A +
Sbjct: 538 -LFPPTS----GMPP----------PT---SGPPSAMPPYPQFEQSETETVHLFIPALSV 579
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 580 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 634
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 635 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 685
>gi|348511523|ref|XP_003443293.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 321
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 97/377 (25%), Positives = 165/377 (43%), Gaps = 70/377 (18%)
Query: 115 SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
++ QS G T+ R+L +++G +IGK G VK +REE+ A+I +++ ER+
Sbjct: 4 TKVQSEGGLNVTLTI-RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERI 60
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMAS 231
+ I + PT D + K I EED+ M++
Sbjct: 61 VTI-TGPT----------------------------DTIFKAFAMIAYKFEEDIINSMSN 91
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
+T RL+VP + G L+GK G I+ +R TGA ++V D LP +T+
Sbjct: 92 SPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVA-GDMLP---NSTERA 147
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMH 345
V ISG P + + ++ ++ ++P K +P P+S P + G ++ A H
Sbjct: 148 VTISGTPEAIIQCVRQICVVMLESPPKGATIPYRPKPTSTPVIFSGGQAYTIQGQYAIPH 207
Query: 346 PLGNSSWPARNSSLH--GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKIL 403
P + + LH M TP+ P+ G +++ PP E++ +
Sbjct: 208 -------PDQLTKLHQLAMQQTPFTPLGQTTPAFPG---LDASPPASTHELTIPNDL--- 254
Query: 404 CSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDA 463
IG +IG+ G + +++Q +GA I + +A S ER I + + I+A
Sbjct: 255 -----IGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINA 309
Query: 464 ILQLQNKTSEFSEKGTI 480
L TSE + GT+
Sbjct: 310 RL-----TSEVTGMGTL 321
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 86/161 (53%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++ +
Sbjct: 10 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT 67
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + D I + N S + K +T RL+VP+S+ G ++G+GG I
Sbjct: 68 DTIFKAFAMIAYKFEE--DIINSMSN--SPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
EMR T A ++V G D P S+E V I G+ E +I
Sbjct: 124 EMRESTGAQVQVAG------DMLPNSTERAVTISGTPEAII 158
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 44/250 (17%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEMREST 129
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 130 GAQVQVAGDMLPNSTERAVTISGTPEAIIQCVRQICVVMLESPPKGATIPYRPKPTSTPV 189
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD------DNENSTITA 242
A + + PH D L K+H +++ F + D T
Sbjct: 190 IFSGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFTPLGQTTPAFPGLDASPPASTH 246
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
L +PN+++GC++G++G I +R +GA I++ A +++ + I+G P
Sbjct: 247 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANA-----MEGSSERQITITGTPANIS 301
Query: 303 RALYEVSTLL 312
A Y ++ L
Sbjct: 302 LAQYLINARL 311
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 245 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANAMEGSSERQITITGTP 297
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 298 ANISLAQYLINARLTS 313
>gi|426218399|ref|XP_004003434.1| PREDICTED: poly(rC)-binding protein 3 isoform 3 [Ovis aries]
Length = 336
Score = 90.5 bits (223), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 89/348 (25%), Positives = 151/348 (43%), Gaps = 89/348 (25%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLV 246
DA+ K I EED+ M++ +T RL+V
Sbjct: 66 ---------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + +
Sbjct: 105 PASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVK 160
Query: 307 EVSTLLHQNPRKDKP----------PSSFP------QAYGGQNFHSPPAP-MADMH---- 345
++ ++ + K P P+S P QAY Q ++ P P + +H
Sbjct: 161 QICVVMLEVQSKSPPRGVSRVVAPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAM 220
Query: 346 ------PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAE 397
PLG N ++P + ++ + S PW +++ PP E++
Sbjct: 221 QQTPFPPLGQTNPAFPGTDRAVPFVRS-PW-------------ACLDASPPASTHELTIP 266
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+ IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 267 NDL--------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 306
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 57/243 (23%), Positives = 109/243 (44%), Gaps = 30/243 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMK 561
I E+R T A ++V G D P S+E V I G+ + +I M QS
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAIIQCVKQICVVMLEVQSKS 173
Query: 562 VQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPY------HRVNAQQSPYQNINPQQS 615
+ + P+ +S + + +Y P+ H++ QQ+P+ +
Sbjct: 174 PPRGVSRVVAPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNP 233
Query: 616 SYP 618
++P
Sbjct: 234 AFP 236
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/264 (22%), Positives = 108/264 (40%), Gaps = 55/264 (20%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKES--------MEPHCA 208
A++ VA D +P S ER + I +P I + + E + +S + P A
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLEVQSKSPPRGVSRVVAPKPA 187
Query: 209 AQDA--------------------LLKVHDRIIEEDLFGGMASDD--------------- 233
+ L K+H +++ F + +
Sbjct: 188 STPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGTDRAVPFVRS 247
Query: 234 -----DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
D T L +PN+++GC++G++G I +R +GA I++ A ++
Sbjct: 248 PWACLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----GSS 302
Query: 289 DEMVQISGKPNVAKRALYEVSTLL 312
+ + I+G P A Y ++ L
Sbjct: 303 ERQITITGTPANISLAQYLINARL 326
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 63
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 64 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 100
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 260 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 312
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 313 ANISLAQYLINARLTS 328
>gi|291414465|ref|XP_002723480.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 319
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 87/331 (26%), Positives = 147/331 (44%), Gaps = 74/331 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIISSMSNSPATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLGNSSWPA 354
+ ++ ++P K +P P+S P QAY Q ++ P P + +H L P
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPF 221
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
P +G Q + +++ PP E++ + IG +IG
Sbjct: 222 -----------PPLG----QTNPAFPAGLDASPPASTHELTIPNDL--------IGCIIG 258
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+ G + +++Q +GA I + +A S ER I
Sbjct: 259 RQGTKINEIRQMSGAQIKIANATEGSSERQI 289
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 86/161 (53%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++ +
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT 65
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + D I + N S + K +T RL+VP+S+ G ++G+GG I
Sbjct: 66 DAIFKAFAMIAYKFEE--DIISSMSN--SPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 122 EIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 106/247 (42%), Gaps = 38/247 (15%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K SS S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIISSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAET-----------KKESMEP 205
A++ VA D +P S ER + I +P I + + E+ K S
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 187
Query: 206 HCAAQDA-------------LLKVHDRIIEEDLFGGMASDD-------DNENSTITARLL 245
A A L K+H +++ F + + D T L
Sbjct: 188 IFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPAGLDASPPASTHELT 247
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+PN+++GC++G++G I +R +GA I++ A +++ + I+G P A
Sbjct: 248 IPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQ 302
Query: 306 YEVSTLL 312
Y ++ L
Sbjct: 303 YLINARL 309
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 63
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 64 PTDAIFKAFAMIAYKFEEDIISSMSNSPATSKPPVTL 100
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 243 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 295
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 296 ANISLAQYLINARLTS 311
>gi|410897345|ref|XP_003962159.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 321
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 93/361 (25%), Positives = 158/361 (43%), Gaps = 69/361 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 67
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
D + K I EED+ M++ +T RL+VP
Sbjct: 68 --------------------DTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 107
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P + + +
Sbjct: 108 ASQCGSLIGKGGSKIKEMRESTGAQVQVA-GDMLP---NSTERAVTISGTPEAIIQCVKQ 163
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH- 360
+ ++ ++P K +P P+S P + G ++ A H P + + LH
Sbjct: 164 ICVVMLESPPKGATIPYRPKPASTPVIFSGGQAYTIQGQYAIPH-------PDQLTKLHQ 216
Query: 361 -GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
M TP+ P+ G +++ PP E++ + IG +IG+ G
Sbjct: 217 LAMQQTPFTPLGQATPAFPG---LDASPPASTHELTIPNDL--------IGCIIGRQGTK 265
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT 479
+ +++Q +GA I + +A S ER I + + I+A L TSE + GT
Sbjct: 266 INEIRQMSGAQIKIANAMEGSSERQITITGTPANISLAQYLINARL-----TSEVTGMGT 320
Query: 480 I 480
+
Sbjct: 321 L 321
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 10 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 62
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 63 -ITGPTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 121
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I EMR T A ++V G D P S+E V I G+ E +I
Sbjct: 122 IKEMRESTGAQVQVAG------DMLPNSTERAVTISGTPEAII 158
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 105/250 (42%), Gaps = 44/250 (17%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEMREST 129
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 130 GAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 189
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD------DNENSTITA 242
A + + PH D L K+H +++ F + D T
Sbjct: 190 IFSGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFTPLGQATPAFPGLDASPPASTH 246
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
L +PN+++GC++G++G I +R +GA I++ A +++ + I+G P
Sbjct: 247 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANA-----MEGSSERQITITGTPANIS 301
Query: 303 RALYEVSTLL 312
A Y ++ L
Sbjct: 302 LAQYLINARL 311
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 13 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 65
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 66 PTDTIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 102
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 245 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANAMEGSSERQITITGTP 297
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 298 ANISLAQYLINARLTS 313
>gi|297596401|ref|NP_001042525.2| Os01g0235800 [Oryza sativa Japonica Group]
gi|56783855|dbj|BAD81267.1| HEN4 -like [Oryza sativa Japonica Group]
gi|255673037|dbj|BAF04439.2| Os01g0235800 [Oryza sativa Japonica Group]
Length = 449
Score = 90.1 bits (222), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 70/208 (33%), Positives = 108/208 (51%), Gaps = 28/208 (13%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
G+ P +R+LC S K+GG+IGK GN +KS++ +T +I V DT+P SE+R++ I
Sbjct: 108 GSVPPEPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLDTVPKSEDRIVFI--- 164
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
S + + P AQ+A+L V +I+ + + E I
Sbjct: 165 -------------SGPAHPGDGISP---AQNAILHVQRKIV--------PTSNTKEGPAI 200
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
RL+V N VGCLLGK G +I +R +GA+I VL D++P DE+VQISG
Sbjct: 201 -CRLIVSPNQVGCLLGKGGSIIAEMRKLSGAHIIVLSKDKIPKGVPENDEVVQISGASEA 259
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQA 328
+ AL +++ L + +D+ S+ P
Sbjct: 260 IQEALMQITARLRNHLFRDRMASTVPNV 287
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 90/293 (30%), Positives = 148/293 (50%), Gaps = 41/293 (13%)
Query: 265 LRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSS 324
+ +++ IRV D+LP CA+ DE+ QI+G+ + ++ L V+ LL +P K+
Sbjct: 1 MSTDSCCEIRV-SKDKLPLCALPRDELCQITGELDSVRKGLNTVAQLLFTHPPKES---- 55
Query: 325 FPQAYGGQN-------FHSPPAPMADMHPLGNSSWPARNSSLHGMPSTP--WMGGYGDQP 375
G N F+ P M P N P + ++ +P+ P M G+G
Sbjct: 56 --DVLGAHNSGSSRSFFNQPDVLPPGMQP--NLHLPFQGPNVAHLPNFPEALMHGHG--- 108
Query: 376 SRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
S PP + ++LCS+ K+GG+IGKGG N+K +Q +TG I V D
Sbjct: 109 ---------SVPP-------EPLTFRLLCSSDKVGGIIGKGGNNIKSIQNDTGCEIKVLD 152
Query: 436 APTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKT--SEFSEKGTITTRLLVPSSKVGC 493
S++R++ S + S +AIL +Q K + +++G RL+V ++VGC
Sbjct: 153 TVPKSEDRIVFISGPAHPGDGISPAQNAILHVQRKIVPTSNTKEGPAICRLIVSPNQVGC 212
Query: 494 ILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
+LG+GG +I EMR+ + A I +V ++ K+ P + E +V I G+SE + A
Sbjct: 213 LLGKGGSIIAEMRKLSGAHI-IVLSKDKIPKGVPENDE-VVQISGASEAIQEA 263
>gi|147807331|emb|CAN73002.1| hypothetical protein VITISV_044056 [Vitis vinifera]
Length = 1121
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 98/195 (50%), Gaps = 31/195 (15%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P + V+R+L P +K+G +IG+ G +K L EET+A+I + D PG+ ER +++
Sbjct: 37 PGENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMV------- 89
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST-ITAR 243
K+E P A D LL+VH I++ + SD + ++ R
Sbjct: 90 ------------SAKEEPDAPIAPAIDGLLRVHKCIMD------VESDVPSAAGVMVSTR 131
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
LLV G L+GK+G I+ ++ + +RVL + LP A+ D +V+I G+P +
Sbjct: 132 LLVVAAQAGSLIGKQGATIKSIQEASNCIVRVL-GENLPLFALQNDTVVEIQGEPASVHK 190
Query: 304 ALYEVSTLLHQNPRK 318
A+ L+ N RK
Sbjct: 191 AV----ELIASNLRK 201
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 130/273 (47%), Gaps = 39/273 (14%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
E ++L K+G +IG+ G ++K+L +ET A I + D P + ER + SA E
Sbjct: 38 GENVFRMLIPVQKVGYIIGRKGEHIKKLSEETKARIKILDGPPGTSERAVMVSAKEEPDA 97
Query: 456 PRSQTIDAILQLQNKTSEF-----SEKGT-ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
P + ID +L++ + S G ++TRLLV +++ G ++G+ G I ++ +
Sbjct: 98 PIAPAIDGLLRVHKCIMDVESDVPSAAGVMVSTRLLVVAAQAGSLIGKQGATIKSIQEAS 157
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG--SSEH----LISAHGTYQSFMTSGQSMKVQ 563
+RV+G + L ++ +V+I+G +S H LI+++ + F+ +KV
Sbjct: 158 NCIVRVLGENLPL---FALQNDTVVEIQGEPASVHKAVELIASN--LRKFLVDRSVIKVF 212
Query: 564 PSSYQNINPQQSSCQTMSSHQSSYQN----MNTQQSPYHRVNAQ--QSPYQ--NINPQQS 615
Q N Q + + M QS + +NT P N Q Q PYQ N P +
Sbjct: 213 EMEMQKPNTQGN--ENMPPQQSWDPSQVFPINTGGEPGFVPNLQYMQPPYQLDNYYPPPA 270
Query: 616 SYPM---HTHQG--------AG-TNPHITPTQS 636
P+ H HQG AG ++P +TP QS
Sbjct: 271 QTPLDQHHHHQGPPYGRETAAGVSSPSLTPQQS 303
>gi|328723971|ref|XP_003247997.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Acyrthosiphon pisum]
Length = 559
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 210/488 (43%), Gaps = 95/488 (19%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
+R+ I++ + + GN Q + RIL S +G +IG+ G+ ++ + ++T
Sbjct: 119 MERRNRSAIRQRTYGAPGATPTIGNRQ-TEFPLRILVHSDMVGAIIGRGGSTIRQITQQT 177
Query: 158 QAKITV--ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLK 215
+A++ V D + GS E+ I IY +P E+ C +L+
Sbjct: 178 RARVDVHRKDNV-GSLEKAITIYGNP-------------------ENCTNAC---RKILE 214
Query: 216 VHDRIIEEDLFGGMASDDDNEN-STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIR 274
V M + N N S + ++L NN++G ++GK G+ I+R+ SET I
Sbjct: 215 V------------MQQEATNTNKSDVILKILAHNNLIGRIIGKEGNTIKRIMSETETKIT 262
Query: 275 VLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNF 334
V + + + N + ++ + G +A ++S L Q+ D S PQ
Sbjct: 263 VSSINDI--NSFNYERIITVKGSIENMSKAEAQISAKLRQSFENDL-QSMAPQTVMFPGL 319
Query: 335 HSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEV 394
H PMA M G ++P R G P T + M +I P +V
Sbjct: 320 H----PMAMMSATG-ITYPGR-----GGP-TSYQQFAPAPYPPMYPSTIPPINPALAADV 368
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
+ I SA +G +IG G N++ + + +GAS+ V A T+++++ + +A G
Sbjct: 369 QETAFLFIPNSA--VGAIIGTKGSNIRSMIRFSGASVKV--ASTENEKQGVVGNA--GDA 422
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGTI------------------TTRLLVPSSKVGCILG 496
N Q + + S++ +G I T +LVPSS+VG I+G
Sbjct: 423 NSAQQASRKVTIVGTADSQWKAQGMIFDKLRDEGFVPNNEEVRLTVEILVPSSQVGRIIG 482
Query: 497 QGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI-------SAHGT 549
+GG + E++ RV G+ +KL P GS++ D ++ H+I SA
Sbjct: 483 RGGSNVRELQ-------RVTGSIIKL--PTQGSTDGTEDT--TTVHIIGHFLATQSAQRR 531
Query: 550 YQSFMTSG 557
+S + SG
Sbjct: 532 IRSMVASG 539
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 91/189 (48%), Gaps = 15/189 (7%)
Query: 391 MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF 450
+G EF ++IL + +G +IG+GG ++Q+ Q+T A + V D+ + +A
Sbjct: 141 IGNRQTEFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRK--DNVGSLEKAITI 198
Query: 451 EGLWNPRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
G NP + T IL++ + + + K + ++L ++ +G I+G+ G+ I +
Sbjct: 199 YG--NPENCTNACRKILEVMQQEATNTNKSDVILKILAHNNLIGRIIGKEGNTIKRIMSE 256
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQ 563
T+ I V + D + + E I+ ++GS E++ A QSF QSM Q
Sbjct: 257 TETKITV----SSINDINSFNYERIITVKGSIENMSKAEAQISAKLRQSFENDLQSMAPQ 312
Query: 564 PSSYQNINP 572
+ ++P
Sbjct: 313 TVMFPGLHP 321
>gi|212275472|ref|NP_001130567.1| uncharacterized protein LOC100191666 [Zea mays]
gi|194689502|gb|ACF78835.1| unknown [Zea mays]
gi|413934214|gb|AFW68765.1| hypothetical protein ZEAMMB73_642279 [Zea mays]
Length = 580
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 111/225 (49%), Gaps = 29/225 (12%)
Query: 92 KRPNNQ--FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNI 149
++ N+Q K+ V G+ ++S+ E + P TV+R+L P++K+G +IG G
Sbjct: 18 RKSNDQIVLKQDTVDDEDSGDTTSSAGESKYPG-WPGTTVFRMLIPAQKVGAIIGHKGER 76
Query: 150 VKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAA 209
V+ L EET+A + + + E+ +II+ +++ EP A
Sbjct: 77 VRRLCEETRACVRIIGGHLCAAEQAVIIFG-------------------REQLDEPLPPA 117
Query: 210 QDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSET 269
DALL+V+ + I D S D ++ I R+L P+ L+G+ G +I + +
Sbjct: 118 MDALLRVYQQTINND------SLDVGPDNVIVRRILAPSEQAASLIGEHGVMINSIMEAS 171
Query: 270 GANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+IRVL D LPP A+ D +++I G P +AL V++ L +
Sbjct: 172 QTDIRVL-DDDLPPVALEEDRVIEIWGSPAGVYKALELVASHLRK 215
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
++L A K+G +IG G V++L +ET A + + + E+ + E L P
Sbjct: 57 FRMLIPAQKVGAIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQLDEPLPP 116
Query: 460 TIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+DA+L+ + N + + I R+L PS + ++G+ G +IN + +Q DIR
Sbjct: 117 AMDALLRVYQQTINNDSLDVGPDNVIVRRILAPSEQAASLIGEHGVMINSIMEASQTDIR 176
Query: 515 VV 516
V+
Sbjct: 177 VL 178
>gi|328723973|ref|XP_003247998.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 3 [Acyrthosiphon pisum]
gi|328723975|ref|XP_003247999.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 4 [Acyrthosiphon pisum]
Length = 553
Score = 89.7 bits (221), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 121/488 (24%), Positives = 208/488 (42%), Gaps = 101/488 (20%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
+R+ I++ + + GN Q + RIL S +G +IG+ G+ ++ + ++T
Sbjct: 119 MERRNRSAIRQRTYGAPGATPTIGNRQ-TEFPLRILVHSDMVGAIIGRGGSTIRQITQQT 177
Query: 158 QAKITV--ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLK 215
+A++ V D + GS E+ I IY +P E+ C +L+
Sbjct: 178 RARVDVHRKDNV-GSLEKAITIYGNP-------------------ENCTNAC---RKILE 214
Query: 216 VHDRIIEEDLFGGMASDDDNEN-STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIR 274
V M + N N S + ++L NN++G ++GK G+ I+R+ SET I
Sbjct: 215 V------------MQQEATNTNKSDVILKILAHNNLIGRIIGKEGNTIKRIMSETETKIT 262
Query: 275 VLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNF 334
V + N + ++ + G +A ++S L Q+ D S PQ
Sbjct: 263 V--------SSFNYERIITVKGSIENMSKAEAQISAKLRQSFENDL-QSMAPQTVMFPGL 313
Query: 335 HSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEV 394
H PMA M G ++P R G P T + M +I P +V
Sbjct: 314 H----PMAMMSATG-ITYPGR-----GGP-TSYQQFAPAPYPPMYPSTIPPINPALAADV 362
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
+ I SA +G +IG G N++ + + +GAS+ V A T+++++ + +A G
Sbjct: 363 QETAFLFIPNSA--VGAIIGTKGSNIRSMIRFSGASVKV--ASTENEKQGVVGNA--GDA 416
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGTI------------------TTRLLVPSSKVGCILG 496
N Q + + S++ +G I T +LVPSS+VG I+G
Sbjct: 417 NSAQQASRKVTIVGTADSQWKAQGMIFDKLRDEGFVPNNEEVRLTVEILVPSSQVGRIIG 476
Query: 497 QGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI-------SAHGT 549
+GG + E++ RV G+ +KL P GS++ D ++ H+I SA
Sbjct: 477 RGGSNVRELQ-------RVTGSIIKL--PTQGSTDGTEDT--TTVHIIGHFLATQSAQRR 525
Query: 550 YQSFMTSG 557
+S + SG
Sbjct: 526 IRSMVASG 533
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 88/189 (46%), Gaps = 21/189 (11%)
Query: 391 MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF 450
+G EF ++IL + +G +IG+GG ++Q+ Q+T A + V D+ + +A
Sbjct: 141 IGNRQTEFPLRILVHSDMVGAIIGRGGSTIRQITQQTRARVDVHRK--DNVGSLEKAITI 198
Query: 451 EGLWNPRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
G NP + T IL++ + + + K + ++L ++ +G I+G+ G+ I +
Sbjct: 199 YG--NPENCTNACRKILEVMQQEATNTNKSDVILKILAHNNLIGRIIGKEGNTIKRIMSE 256
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQ 563
T+ I V + E I+ ++GS E++ A QSF QSM Q
Sbjct: 257 TETKITV----------SSFNYERIITVKGSIENMSKAEAQISAKLRQSFENDLQSMAPQ 306
Query: 564 PSSYQNINP 572
+ ++P
Sbjct: 307 TVMFPGLHP 315
>gi|2105469|gb|AAC35208.1| putative RNA binding protein KOC [Homo sapiens]
gi|4098297|gb|AAD09223.1| Koc1 [Homo sapiens]
Length = 579
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 177/411 (43%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ A +
Sbjct: 375 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHQFIPALSV 417
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 472
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 473 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 523
>gi|270007202|gb|EFA03650.1| hypothetical protein TcasGA2_TC013744 [Tribolium castaneum]
Length = 710
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 183/431 (42%), Gaps = 84/431 (19%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G S+ D RIL S +G +IG+ G+ ++ + ++T+A++ V D + GS E+ I IY
Sbjct: 281 GQSRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNV-GSLEKAITIY 339
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P E+ C RI+E M + +N N
Sbjct: 340 GNP-------------------ENCTNAC----------KRILEV-----MQQEANNTNK 365
Query: 239 -TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
I ++L NN++G ++GK G+ I+R+ ET I V + + + N + ++ + G
Sbjct: 366 GEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDI--NSFNLERIITVKGA 423
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
+ RA ++S L Q+ D QA Q P +HP+ +
Sbjct: 424 IDNMSRAEAQISAKLRQSYENDL------QAMAPQTMMFP-----GLHPMAMMATAGIGY 472
Query: 358 SLHGMPS--TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGK 415
G+ + P+ G Y P+ G +S + + + +G +IG
Sbjct: 473 GSRGLYTGQAPYPGMY---PAGAAQGGGDS-----------QETTYLYIPNNAVGAIIGT 518
Query: 416 GGFNVKQLQQETGASIHV----EDAP--TDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +++ + + +GAS+ + E P T ++ RV + E W + + + +
Sbjct: 519 KGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVGSPEAQWKAQYLIFEKMRE--E 576
Query: 470 KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKL--QDPHP 527
S+ +T ++VPSS+VG I+G+GG + E++ RV G+ +KL Q P
Sbjct: 577 GFVAGSDDVRLTVEIMVPSSQVGRIIGKGGQNVRELQ-------RVTGSVIKLPEQGASP 629
Query: 528 GSSECIVDIRG 538
E V I G
Sbjct: 630 QEDETTVHIIG 640
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 91/213 (42%), Gaps = 21/213 (9%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEER 173
+Q N+ + +IL + IG +IGK GN +K + +ET KITV+ D + ER
Sbjct: 357 QQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLER 416
Query: 174 VIIIYSSPTKIAKT---------QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED 224
+I + + +++ Q+ ++D A + M P +
Sbjct: 417 IITVKGAIDNMSRAEAQISAKLRQSYENDLQAMAPQTMMFPGLHPMAMMATAGIGYGSRG 476
Query: 225 LFGGMA---------SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
L+ G A + +S T L +PNN VG ++G +G I+ + +GA++++
Sbjct: 477 LYTGQAPYPGMYPAGAAQGGGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSGASVKI 536
Query: 276 LPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
P D P + V I G P +A Y +
Sbjct: 537 APIDETKPQETQNERRVTIVGSPEAQWKAQYLI 569
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 388 PGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRA 447
PGQ + +F ++IL + +G +IG+ G ++Q+ Q+T A + V D+ + +A
Sbjct: 280 PGQSRQ--TDFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRK--DNVGSLEKA 335
Query: 448 SAFEGLWNPRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
G NP + T IL++ + + + KG I ++L ++ +G I+G+GG+ I +
Sbjct: 336 ITIYG--NPENCTNACKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRI 393
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSM 560
+ T I V + D + + E I+ ++G+ +++ A QS+ Q+M
Sbjct: 394 MQETDTKITV----SSINDINSFNLERIITVKGAIDNMSRAEAQISAKLRQSYENDLQAM 449
Query: 561 KVQPSSYQNINPQQSSCQTMSSHQSSY--QNMNTQQSPY 597
Q + ++P M++ Y + + T Q+PY
Sbjct: 450 APQTMMFPGLHP----MAMMATAGIGYGSRGLYTGQAPY 484
>gi|194306633|ref|NP_001123613.1| poly(rC)-binding protein 3 isoform 2 [Homo sapiens]
gi|119629728|gb|EAX09323.1| poly(rC) binding protein 3, isoform CRA_a [Homo sapiens]
Length = 345
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 91/366 (24%), Positives = 155/366 (42%), Gaps = 85/366 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAP-MADMH----------PLG--NSSWPA 354
+ ++ +AY Q ++ P P + +H PLG N ++P
Sbjct: 194 ICVVML-------------EAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPG 240
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
LH + G S +++ PP E++ + IG +IG
Sbjct: 241 EKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL--------IGCIIG 284
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF 474
+ G + +++Q +GA I + +A S ER I + P + ++ L TSE
Sbjct: 285 RQGTKINEIRQMSGAQIKIANATEGSSERQITITG-----TPANISLAQYLINARLTSEV 339
Query: 475 SEKGTI 480
+ GT+
Sbjct: 340 TGMGTL 345
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 40/245 (16%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAET---KKESMEPHCAAQDAL 213
A++ VA D +P S ER + I +P I + + E + + PH L
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPH----PDL 215
Query: 214 LKVHDRIIEEDLF--------------------------GGMASDDDNENSTITARLLVP 247
K+H +++ F G +S D T L +P
Sbjct: 216 TKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIP 275
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
N+++GC++G++G I +R +GA I++ A +++ + I+G P A Y
Sbjct: 276 NDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYL 330
Query: 308 VSTLL 312
++ L
Sbjct: 331 INARL 335
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 95
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 269 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 321
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 322 ANISLAQYLINARLTS 337
>gi|242039711|ref|XP_002467250.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
gi|241921104|gb|EER94248.1| hypothetical protein SORBIDRAFT_01g022040 [Sorghum bicolor]
Length = 588
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 29/225 (12%)
Query: 92 KRPNNQ--FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNI 149
++ N Q K V GN ++S+ E + P +V+R+L P++K+G +IG G
Sbjct: 18 RKSNEQSVLKLDAVDDEDSGNTTSSAGESKYPG-WPGTSVFRMLIPAQKVGVIIGHKGER 76
Query: 150 VKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAA 209
V+ L EET+A + + + E+ +II+ +++ EP A
Sbjct: 77 VRRLCEETRACVRIIGGHLCAAEQAVIIFG-------------------REQPEEPLPPA 117
Query: 210 QDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSET 269
DALL+V+ + I ++ S D + I R+LVP+ L+G+ G +I + +
Sbjct: 118 MDALLRVYQQTINDE------SLDVGSDGVIVRRILVPSEQAESLIGEHGVMINSIMEAS 171
Query: 270 GANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+IRVL D LPP A+ D +V+I G P +AL V++ L +
Sbjct: 172 QTDIRVLDGD-LPPVALEEDRVVEIWGLPARVHKALELVASHLRK 215
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 62/122 (50%), Gaps = 5/122 (4%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
++L A K+G +IG G V++L +ET A + + + E+ + E P
Sbjct: 57 FRMLIPAQKVGVIIGHKGERVRRLCEETRACVRIIGGHLCAAEQAVIIFGREQPEEPLPP 116
Query: 460 TIDAILQLQNKT-----SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+DA+L++ +T + G I R+LVPS + ++G+ G +IN + +Q DIR
Sbjct: 117 AMDALLRVYQQTINDESLDVGSDGVIVRRILVPSEQAESLIGEHGVMINSIMEASQTDIR 176
Query: 515 VV 516
V+
Sbjct: 177 VL 178
>gi|195042483|ref|XP_001991440.1| GH12054 [Drosophila grimshawi]
gi|193901198|gb|EDW00065.1| GH12054 [Drosophila grimshawi]
Length = 611
Score = 89.4 bits (220), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 193/449 (42%), Gaps = 76/449 (16%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G + AD RIL S +G +IG+ G+ ++++ ++++A++ V + + GS E+ I IY
Sbjct: 78 GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV-GSLEKSITIY 136
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P D+ K +E Q+AL S + E
Sbjct: 137 GNP-----------DNCTNACKRILE--VMQQEAL-----------------STNKGE-- 164
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
I ++L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G
Sbjct: 165 -ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--NSYNLERIITVKGLI 221
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS 358
RA ++ST L Q+ D QA Q+ P +HP+ S P
Sbjct: 222 ENMSRAENQISTKLRQSYENDL------QAIAPQSLMFP-----GLHPMAMMSTPG---- 266
Query: 359 LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
+GM M Q M + PP ++ + I +A +G +IG G
Sbjct: 267 -NGMVFNTSMPFPSCQSFAMSKTPASVVPPAFPNDMQETTYLYIPNNA--VGAIIGTKGS 323
Query: 419 NVKQLQQETGASIHVEDAPTDSDE--------RVIRASAFEGLWNPRSQTIDAILQLQNK 470
+++ + + + AS+ + AP D+D+ +V EG W + + + +
Sbjct: 324 HIRSIMRFSSASLKI--APLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKM-----R 376
Query: 471 TSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP 527
F ++ +T LLV SS+VG I+G+GG + E++R T + I++ L P
Sbjct: 377 EEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL--PEHALAPPSG 434
Query: 528 GSSECIVDIRGSSEHLISAHGTYQSFMTS 556
G E V I G + SA ++ M S
Sbjct: 435 GDEETPVHIIGQFYSVQSAQRRIRAMMLS 463
>gi|195481990|ref|XP_002101863.1| GE15370 [Drosophila yakuba]
gi|194189387|gb|EDX02971.1| GE15370 [Drosophila yakuba]
Length = 566
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 196/449 (43%), Gaps = 76/449 (16%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G + AD RIL S +G +IG+ G+ ++++ ++++A++ V + + GS E+ I IY
Sbjct: 72 GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV-GSLEKSITIY 130
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P ++ +A + E M+ Q+AL S + E
Sbjct: 131 GNP--------ENCTNACKRILEVMQ-----QEAL-----------------STNKGE-- 158
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
I ++L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G
Sbjct: 159 -ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--NSFNLERIITVKGLI 215
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS 358
RA ++ST L Q+ D QA Q+ P +HP+ S P
Sbjct: 216 ENMSRAENQISTKLRQSYENDL------QAMAPQSLMFP-----GLHPMAMMSTPG---- 260
Query: 359 LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
+GM M Q M + PP ++ + I +A +G +IG G
Sbjct: 261 -NGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNA--VGAIIGTKGS 317
Query: 419 NVKQLQQETGASIHVEDAPTDSDE--------RVIRASAFEGLWNPRSQTIDAILQLQNK 470
+++ + + + AS+ + AP D+D+ +V EG W + + + +
Sbjct: 318 HIRSIMRFSNASLKI--APLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKM-----R 370
Query: 471 TSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP 527
F ++ +T LLV SS+VG I+G+GG + E++R T + I++ L P
Sbjct: 371 EEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL--PEHALAPPSG 428
Query: 528 GSSECIVDIRGSSEHLISAHGTYQSFMTS 556
G E V I G + SA ++ M S
Sbjct: 429 GDEETPVHIIGPFYSVQSAQRRIRAMMLS 457
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP-TDSDERVIRASAFEGLW 454
A+F ++IL + +G +IG+ G ++ + Q++ A + V S E+ I
Sbjct: 77 ADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG----- 131
Query: 455 NPRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
NP + T IL++ + + + KG I ++L ++ +G I+G+ G+ I + + T
Sbjct: 132 NPENCTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 191
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSY 567
I V + D + + E I+ ++G E++ A QS+ Q+M Q +
Sbjct: 192 ITVSS----INDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMF 247
Query: 568 QNINP 572
++P
Sbjct: 248 PGLHP 252
>gi|195439130|ref|XP_002067484.1| GK16164 [Drosophila willistoni]
gi|194163569|gb|EDW78470.1| GK16164 [Drosophila willistoni]
Length = 587
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 107/450 (23%), Positives = 192/450 (42%), Gaps = 78/450 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G + AD RIL S +G +IG+ G+ ++++ ++++A++ V + + GS E+ I IY
Sbjct: 78 GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV-GSLEKSITIY 136
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P E+ C RI+E M + ++ N
Sbjct: 137 GNP-------------------ENCTNAC----------KRILEV-----MQQEANSTNK 162
Query: 239 -TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
I ++L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G
Sbjct: 163 GEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--NSFNLERIITVKGL 220
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
RA ++ST L Q+ D QA Q+ P +HP+ S P
Sbjct: 221 IENMSRAENQISTKLRQSYENDL------QAMAPQSLMFP-----GLHPMAMMSTPGNGM 269
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
+ P G+ M N PP ++ + I +A +G +IG G
Sbjct: 270 VFNTSMPFPSCQGFA-----MSKTPANVVPPVFPNDMQETTYLYIPNNA--VGAIIGTKG 322
Query: 418 FNVKQLQQETGASIHVEDAPTDSDE--------RVIRASAFEGLWNPRSQTIDAILQLQN 469
+++ + + + AS+ + AP D+D+ +V EG W + + +
Sbjct: 323 SHIRSIMRFSNASLKI--APIDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKM----- 375
Query: 470 KTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPH 526
+ F ++ +T LLV SS+VG I+G+GG + E++R T + I++ L P
Sbjct: 376 REEGFMCGTDDVRLTIELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL--PEHALAPPS 433
Query: 527 PGSSECIVDIRGSSEHLISAHGTYQSFMTS 556
G E V I G + SA ++ M S
Sbjct: 434 GGDEETPVHIIGPFYSVQSAQRRIRAMMLS 463
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/221 (20%), Positives = 92/221 (41%), Gaps = 32/221 (14%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEER 173
+Q ++ + +IL + IG +IGK+GN +K + ++T KITV+ D + ER
Sbjct: 154 QQEANSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNLER 213
Query: 174 VIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASD- 232
+I + +++ +N+ ++ + ++ +H + GM +
Sbjct: 214 IITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTPGNGMVFNT 273
Query: 233 -------------------------DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRS 267
+D + +T L +PNN VG ++G +G I+ +
Sbjct: 274 SMPFPSCQGFAMSKTPANVVPPVFPNDMQETTY---LYIPNNAVGAIIGTKGSHIRSIMR 330
Query: 268 ETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ A++++ P D P T+ V I G P +A Y +
Sbjct: 331 FSNASLKIAPIDADKPLDQQTERKVTIVGTPEGQWKAQYMI 371
Score = 48.1 bits (113), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERVIRASAFEGLW 454
A+F ++IL + +G +IG+ G ++ + Q++ A + V S E+ I
Sbjct: 83 ADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITI-----YG 137
Query: 455 NPRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
NP + T IL++ + + + KG I ++L ++ +G I+G+ G+ I + + T
Sbjct: 138 NPENCTNACKRILEVMQQEANSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 197
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSY 567
I V + D + + E I+ ++G E++ A QS+ Q+M Q +
Sbjct: 198 ITV----SSINDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMF 253
Query: 568 QNINP 572
++P
Sbjct: 254 PGLHP 258
>gi|332025247|gb|EGI65421.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Acromyrmex
echinatior]
Length = 568
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 186/439 (42%), Gaps = 93/439 (21%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G+ + D RIL S +G +IG+ G+ ++ + + T+A++ V D + GS E+ I IY
Sbjct: 114 GSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNV-GSLEKAITIY 172
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P E A +L+V M + +N N
Sbjct: 173 GNP----------------------ENCTNACKKILEV------------MQQEANNTNK 198
Query: 239 -TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
IT ++L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G
Sbjct: 199 GEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDI--NSFNLERIITVKGS 256
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
+ +A +S+ L Q+ D QA Q+ P +HP+
Sbjct: 257 IDNMSKAESMISSKLRQSYENDL------QAMAPQSMMFP-----GLHPMA--------- 296
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGS----INSCPPGQMGEVSAEF--SMKILCSAGKIGG 411
M ST MG P GSG S P Q G +++ + + +G
Sbjct: 297 ----MMSTAGMGYSSRGPGLYGSGPAPYPYQSSLPTQQGVPASDTQETTFLYIPNNSVGA 352
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTDSD----ERVIRASAFEGLWNPRSQTIDAILQL 467
+IG G +++ + + +GAS+ + AP + D ++ R G +P SQ L
Sbjct: 353 IIGTKGSHIRNIIRFSGASVKI--APLEQDKPAEQQTERKVTIVG--SPESQWKAQYLIF 408
Query: 468 QNKTSEFSEKGT----ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ 523
+ E GT +T +LVPS++VG I+G+GG + E++ RV G+ +KL
Sbjct: 409 EKMREEGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQ-------RVTGSVIKLS 461
Query: 524 D----PHPGSSECIVDIRG 538
+ P E V I G
Sbjct: 462 EQQATPPSAEEETTVHIIG 480
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 34/222 (15%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEER 173
+Q N+ + +IL + IG +IGK GN +K + ++T KITV+ D + ER
Sbjct: 190 QQEANNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNLER 249
Query: 174 VIIIYSSPTKIAKT---------QNKDDDSAAETKKESMEP--HCAAQDALLKVHDRIIE 222
+I + S ++K Q+ ++D A + M P H A + +
Sbjct: 250 IITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRG 309
Query: 223 EDLFG----------------GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLR 266
L+G G+ + D E T L +PNN VG ++G +G I+ +
Sbjct: 310 PGLYGSGPAPYPYQSSLPTQQGVPASDTQE----TTFLYIPNNSVGAIIGTKGSHIRNII 365
Query: 267 SETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+GA++++ P ++ P T+ V I G P +A Y +
Sbjct: 366 RFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI 407
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 90/183 (49%), Gaps = 15/183 (8%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+F ++IL + +G +IG+ G ++Q+ Q T A + V D+ + +A G NP
Sbjct: 120 DFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRK--DNVGSLEKAITIYG--NP 175
Query: 457 RSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ T IL++ + + + KG IT ++L ++ +G I+G+GG+ I + + T I
Sbjct: 176 ENCTNACKKILEVMQQEANNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKIT 235
Query: 515 VVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSYQN 569
V + D + + E I+ ++GS +++ A QS+ Q+M Q +
Sbjct: 236 V----SSINDINSFNLERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSMMFPG 291
Query: 570 INP 572
++P
Sbjct: 292 LHP 294
>gi|15082311|gb|AAH12061.1| PCBP3 protein [Homo sapiens]
Length = 313
Score = 89.0 bits (219), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 92/367 (25%), Positives = 155/367 (42%), Gaps = 85/367 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLV 246
DA+ K I EED+ M++ +T RL+V
Sbjct: 66 ---------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + +
Sbjct: 105 PASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVK 160
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAP-MADMH----------PLG--NSSWP 353
++ ++ +AY Q ++ P P + +H PLG N ++P
Sbjct: 161 QICVVML-------------EAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFP 207
Query: 354 ARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVI 413
LH + G S +++ PP E++ + IG +I
Sbjct: 208 GEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL--------IGCII 251
Query: 414 GKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSE 473
G+ G + +++Q +GA I + +A S ER I + + I+A L TSE
Sbjct: 252 GRQGTKINEIRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL-----TSE 306
Query: 474 FSEKGTI 480
+ GT+
Sbjct: 307 VTGMGTL 313
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 86/161 (53%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++ +
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT 65
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + D I + N S + K +T RL+VP+S+ G ++G+GG I
Sbjct: 66 DAIFKAFAMIAYKFEE--DIINSMSN--SPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 122 EIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 40/245 (16%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAET---KKESMEPHCAAQDAL 213
A++ VA D +P S ER + I +P I + + E + + PH L
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPH----PDL 183
Query: 214 LKVHDRIIEEDLF--------------------------GGMASDDDNENSTITARLLVP 247
K+H +++ F G +S D T L +P
Sbjct: 184 TKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIP 243
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
N+++GC++G++G I +R +GA I++ A +++ + I+G P A Y
Sbjct: 244 NDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYL 298
Query: 308 VSTLL 312
++ L
Sbjct: 299 INARL 303
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 63
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 64 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 100
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 13/77 (16%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS- 539
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 237 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 289
Query: 540 -----SEHLISAHGTYQ 551
+++LI+A T +
Sbjct: 290 ANISLAQYLINARLTSE 306
>gi|432934409|ref|XP_004081928.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Oryzias latipes]
Length = 600
Score = 88.6 bits (218), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 112/473 (23%), Positives = 192/473 (40%), Gaps = 91/473 (19%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKIA 185
D RIL P++ +G +IGK G +K++ ++TQ+K+ + G+ E+ I I+S+P
Sbjct: 187 DFPLRILVPTQFVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKPITIHSTP---- 242
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
E +A +L + + +++ N I ++L
Sbjct: 243 ------------------EGCSSACRMILDIMQK----------EANETKTNEEIPLKIL 274
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
N++VG L+GK G ++++ ETG I + L C N + + + G +A
Sbjct: 275 AHNSLVGRLIGKEGRNLKKIEEETGTKITISSLQDLTIC--NPERTITVKGSLEACCKAE 332
Query: 306 YEVSTLLHQ---------NPRKDKPPSSFPQAYG-------------GQNFHSPPAPMAD 343
E+ L + N + + P A G G PP P A
Sbjct: 333 VEIMKKLKEAYENDIAAINQQANLIPGLNLNALGIFSSGLPVLPPAAGSRGAVPPMPPAG 392
Query: 344 MHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKIL 403
+P + S + S L+G+P T S P Q + + E + L
Sbjct: 393 YNPFLSHS--SHLSGLYGVPPT-------------------SAIPHQHSQQAPEQEVVYL 431
Query: 404 -CSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTID 462
+G +IGK G ++KQL GASI + AP +S + R G + +
Sbjct: 432 FIPTQAVGALIGKKGQHIKQLAHFAGASIKI--APAESPDVTERMVIITGTPEAQFKAQG 489
Query: 463 AILQLQNKTSEFS--EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARV 520
I + + FS E+ + T + VPSS G ++G+GG +NE++ T A++ V R
Sbjct: 490 RIFGKLKEENFFSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIV--PRD 547
Query: 521 KLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQNINPQ 573
++ D + E V I G H ++ + Q +K Q +Q P+
Sbjct: 548 QIPDE---NDEVFVKISG---HFFASQTAQRKIREIIQQVKQQEQKHQQGPPE 594
>gi|225445949|ref|XP_002264417.1| PREDICTED: KH domain-containing protein At4g18375 isoform 1 [Vitis
vinifera]
Length = 466
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 97/191 (50%), Gaps = 32/191 (16%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P K+G +IG+ G ++K + EET+A+I V D G+ +R+++I
Sbjct: 75 PGDCVFRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLISG----- 129
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA-- 242
++E P A DA+++V R+ G++ + + + A
Sbjct: 130 --------------REEPEAPLSPAMDAVIRVFKRVT------GLSESEGDGKAYGAAGV 169
Query: 243 -----RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
RLLV + L+GK+G +I+ ++ TGA++RVL D +P A + +V++ G+
Sbjct: 170 AFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASVRVLSGDEVPFYAAADERIVELQGE 229
Query: 298 PNVAKRALYEV 308
++AL V
Sbjct: 230 ALKVQKALEAV 240
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 77/154 (50%), Gaps = 16/154 (10%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G +K++ +ET A I V D + +R++ S E P S
Sbjct: 80 FRLIVPVLKVGSIIGRKGELIKKMCEETRARIRVLDGAVGTSDRIVLISGREEPEAPLSP 139
Query: 460 TIDAILQLQNKTSEFSEK------------GTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+DA++++ + + SE + RLLV S++ ++G+ G +I ++
Sbjct: 140 AMDAVIRVFKRVTGLSESEGDGKAYGAAGVAFCSIRLLVASTQAINLIGKQGSLIKSIQE 199
Query: 508 RTQADIRVV-GARVKLQDPHPGSSECIVDIRGSS 540
T A +RV+ G V + + E IV+++G +
Sbjct: 200 STGASVRVLSGDEVPF---YAAADERIVELQGEA 230
>gi|194889982|ref|XP_001977205.1| GG18899 [Drosophila erecta]
gi|190648854|gb|EDV46132.1| GG18899 [Drosophila erecta]
Length = 568
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 196/449 (43%), Gaps = 76/449 (16%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G + AD RIL S +G +IG+ G+ ++++ ++++A++ V + + GS E+ I IY
Sbjct: 72 GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV-GSLEKSITIY 130
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P ++ +A + E M+ Q+AL S + E
Sbjct: 131 GNP--------ENCTNACKRILEVMQ-----QEAL-----------------STNKGE-- 158
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
I ++L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G
Sbjct: 159 -ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--NSFNLERIITVKGLI 215
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS 358
RA ++ST L Q+ D QA Q+ P +HP+ S P
Sbjct: 216 ENMSRAENQISTKLRQSYENDL------QAMAPQSLMFP-----GLHPMAMMSTPG---- 260
Query: 359 LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
+GM M Q M + PP ++ + I +A +G +IG G
Sbjct: 261 -NGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNA--VGAIIGTKGS 317
Query: 419 NVKQLQQETGASIHVEDAPTDSDE--------RVIRASAFEGLWNPRSQTIDAILQLQNK 470
+++ + + + AS+ + AP D+D+ +V EG W + + + +
Sbjct: 318 HIRSIMRFSNASLKI--APLDADKPLDQQTERKVTIVGTPEGQWKAQFMIFEKM-----R 370
Query: 471 TSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP 527
F ++ +T LLV SS+VG I+G+GG + E++R T + I++ L P
Sbjct: 371 EEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL--PEHALAPPSG 428
Query: 528 GSSECIVDIRGSSEHLISAHGTYQSFMTS 556
G E V I G + SA ++ M S
Sbjct: 429 GDEETPVHIIGPFYSVQSAQRRIRAMMLS 457
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP-TDSDERVIRASAFEGLW 454
A+F ++IL + +G +IG+ G ++ + Q++ A + V S E+ I
Sbjct: 77 ADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG----- 131
Query: 455 NPRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
NP + T IL++ + + + KG I ++L ++ +G I+G+ G+ I + + T
Sbjct: 132 NPENCTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 191
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSY 567
I V + D + + E I+ ++G E++ A QS+ Q+M Q +
Sbjct: 192 ITVSS----INDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMF 247
Query: 568 QNINP 572
++P
Sbjct: 248 PGLHP 252
>gi|328787572|ref|XP_393878.3| PREDICTED: IGF-II mRNA-binding protein [Apis mellifera]
gi|380027404|ref|XP_003697415.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Apis florea]
Length = 626
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 92/404 (22%), Positives = 179/404 (44%), Gaps = 66/404 (16%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G+ + AD RIL S +G +IG+ G+ ++ + + T+A++ V D++ G+ E+ I IY
Sbjct: 180 GSGRQADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL-GAAEKAITIY 238
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P ++ K+ ME + +++ +G +
Sbjct: 239 GNP-----------ENCTNACKKIME---------------VTQQEAYGLSKGE------ 266
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
I+ R+L NN++G ++GK G I+++ +T I V + + N + ++ + G
Sbjct: 267 -ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINN--FNLERIITVKGSI 323
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA-PMADMHPLGNSSWPARNS 357
+ +A +S L Q+ D QA Q+ P PMA M G + +R
Sbjct: 324 DNMSKAESMISNKLRQSYEND------LQAMAPQSLMFPGLHPMAMMSTAG-MGYSSRGP 376
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
L+G P+ P + + P G E + + +G +IG G
Sbjct: 377 GLYGSGPAPY-------PYQASLPTQQGIPIGDTQETAFLY-----IPNTSVGAIIGSKG 424
Query: 418 FNVKQLQQETGASIHV----EDAPTD--SDERVIRASAFEGLWNPRSQTIDAILQLQNKT 471
+++ + + +GAS+ + +D P D +D +V + E W + + + +
Sbjct: 425 SHIRNIIRFSGASVKIAPIEQDKPVDQQNDRKVTIVGSPESQWKAQYLIFEKMRE--EGF 482
Query: 472 SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+E +T +LVPS++VG I+G+GG + E++R T + I++
Sbjct: 483 VAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKL 526
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 115 SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSE 171
++++++G S+ + RIL + IG +IGK G +K + ++T KITV+ D +
Sbjct: 255 TQQEAYGLSK-GEISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFNL 313
Query: 172 ERVIIIYSSPTKIAKT---------QNKDDDSAAETKKESMEP--HCAAQDALLKVHDRI 220
ER+I + S ++K Q+ ++D A + M P H A + +
Sbjct: 314 ERIITVKGSIDNMSKAESMISNKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTAGMGYSS 373
Query: 221 IEEDLFG----------------GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQR 264
L+G G+ D E TA L +PN VG ++G +G I+
Sbjct: 374 RGPGLYGSGPAPYPYQASLPTQQGIPIGDTQE----TAFLYIPNTSVGAIIGSKGSHIRN 429
Query: 265 LRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ +GA++++ P ++ P D V I G P +A Y +
Sbjct: 430 IIRFSGASVKIAPIEQDKPVDQQNDRKVTIVGSPESQWKAQYLI 473
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 89/184 (48%), Gaps = 15/184 (8%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
A+F ++IL + +G +IG+ G ++Q+ Q T A + V DS +A G N
Sbjct: 185 ADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHR--KDSLGAAEKAITIYG--N 240
Query: 456 PRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
P + T I+++ + + KG I+ R+L ++ +G I+G+GG I ++ + T I
Sbjct: 241 PENCTNACKKIMEVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKI 300
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSYQ 568
V + D + + E I+ ++GS +++ A QS+ Q+M Q +
Sbjct: 301 TV----SSINDINNFNLERIITVKGSIDNMSKAESMISNKLRQSYENDLQAMAPQSLMFP 356
Query: 569 NINP 572
++P
Sbjct: 357 GLHP 360
>gi|355560220|gb|EHH16906.1| hypothetical protein EGK_13160 [Macaca mulatta]
Length = 361
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/401 (24%), Positives = 163/401 (40%), Gaps = 107/401 (26%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHS----------------PPAP----- 340
+ ++ ++P K +P P+S P + G + PP P
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQ 221
Query: 341 ---------MADMH----------PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMG 379
+ +H PLG N ++P LH + G
Sbjct: 222 GQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ-------- 273
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
S +++ PP E++ + IG +IG+ G + +++Q +GA I + +A
Sbjct: 274 SSGLDASPPASTHELTIPNDL--------IGCIIGRQGTKINEIRQMSGAQIKIANATEG 325
Query: 440 SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
S ER I + + I+A L TSE + GT+
Sbjct: 326 SSERQITITGTPANISLAQYLINARL-----TSEVTGMGTL 361
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAI 155
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 49
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 337
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 338 ANISLAQYLINARLTS 353
>gi|322792902|gb|EFZ16735.1| hypothetical protein SINV_14612 [Solenopsis invicta]
Length = 555
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 109/439 (24%), Positives = 185/439 (42%), Gaps = 93/439 (21%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G+ + D RIL S +G +IG+ G ++ + + T+A++ V D + GS E+ I IY
Sbjct: 105 GSGRQTDFPLRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRKDNV-GSLEKAITIY 163
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P E A +L+V M + +N N
Sbjct: 164 GNP----------------------ENCTNACKKILEV------------MQQEANNTNK 189
Query: 239 -TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
IT ++L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G
Sbjct: 190 GEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDI--NSFNLERIITVKGS 247
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
+ +A +S+ L Q+ D QA Q+ P +HP+
Sbjct: 248 IDNMSKAESMISSKLRQSYENDL------QAMAPQSMMFP-----GLHPMA--------- 287
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGS----INSCPPGQMGEVSAEF--SMKILCSAGKIGG 411
M ST MG P GSG S P Q G +++ + + +G
Sbjct: 288 ----MMSTAGMGYSSRGPGLYGSGPAPYPYQSSLPTQQGVPASDTQETTFLYIPNNSVGA 343
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTDSD----ERVIRASAFEGLWNPRSQTIDAILQL 467
+IG G +++ + + +GAS+ + AP + D ++ R G +P SQ L
Sbjct: 344 IIGTKGSHIRNIIRFSGASVKI--APLEQDKPAEQQTERKVTIVG--SPESQWKAQYLIF 399
Query: 468 QNKTSEFSEKGT----ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ 523
+ E GT +T +LVPS++VG I+G+GG + E++ RV G+ +KL
Sbjct: 400 EKMREEGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQ-------RVTGSVIKLS 452
Query: 524 D----PHPGSSECIVDIRG 538
+ P E V I G
Sbjct: 453 EQQATPPSAEEETTVHIIG 471
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 97/222 (43%), Gaps = 34/222 (15%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEER 173
+Q N+ + +IL + IG +IGK GN +K + ++T KITV+ D + ER
Sbjct: 181 QQEANNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNLER 240
Query: 174 VIIIYSSPTKIAKT---------QNKDDDSAAETKKESMEP--HCAAQDALLKVHDRIIE 222
+I + S ++K Q+ ++D A + M P H A + +
Sbjct: 241 IITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRG 300
Query: 223 EDLFG----------------GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLR 266
L+G G+ + D E T L +PNN VG ++G +G I+ +
Sbjct: 301 PGLYGSGPAPYPYQSSLPTQQGVPASDTQE----TTFLYIPNNSVGAIIGTKGSHIRNII 356
Query: 267 SETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+GA++++ P ++ P T+ V I G P +A Y +
Sbjct: 357 RFSGASVKIAPLEQDKPAEQQTERKVTIVGSPESQWKAQYLI 398
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/184 (26%), Positives = 92/184 (50%), Gaps = 17/184 (9%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+F ++IL + +G +IG+ G ++Q+ Q T A + V D+ + +A G NP
Sbjct: 111 DFPLRILVQSDMVGAIIGRQGTTIRQITQLTRARVDVHRK--DNVGSLEKAITIYG--NP 166
Query: 457 RSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ T IL++ + + + KG IT ++L ++ +G I+G+GG+ I + + T I
Sbjct: 167 ENCTNACKKILEVMQQEANNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKIT 226
Query: 515 VVGARVKLQDPHPGSSECIVDIRGS------SEHLISAHGTYQSFMTSGQSMKVQPSSYQ 568
V + D + + E I+ ++GS +E +IS+ QS+ Q+M Q +
Sbjct: 227 V----SSINDINSFNLERIITVKGSIDNMSKAESMISSK-LRQSYENDLQAMAPQSMMFP 281
Query: 569 NINP 572
++P
Sbjct: 282 GLHP 285
>gi|195394077|ref|XP_002055672.1| GJ18657 [Drosophila virilis]
gi|194150182|gb|EDW65873.1| GJ18657 [Drosophila virilis]
Length = 650
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 196/449 (43%), Gaps = 76/449 (16%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G + AD RIL S +G +IG+ G+ ++++ ++++A++ V + + GS E+ I IY
Sbjct: 136 GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV-GSLEKSITIY 194
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P ++ +A + E M+ Q+AL S + E
Sbjct: 195 GNP--------ENCTNACKRILEVMQ-----QEAL-----------------STNKGE-- 222
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
I ++L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G
Sbjct: 223 -ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--NSFNLERIITVKGLI 279
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS 358
RA ++ST L Q+ D QA Q+ P +HP+ S P
Sbjct: 280 ENMSRAENQISTKLRQSYENDL------QAMAPQSLMFP-----GLHPMAMMSTPG---- 324
Query: 359 LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
+GM M Q M + PP ++ + I +A +G +IG G
Sbjct: 325 -NGMVFNTSMPFPSCQSFAMSKTPASVVPPAFPNDMQETTYLYIPNNA--VGAIIGTKGS 381
Query: 419 NVKQLQQETGASIHVEDAPTDSDE--------RVIRASAFEGLWNPRSQTIDAILQLQNK 470
+++ + + + AS+ + AP D+D+ +V EG W + + + +
Sbjct: 382 HIRSIMRFSSASLKI--APLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKM-----R 434
Query: 471 TSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP 527
F ++ +T LLV SS+VG I+G+GG + E++R T + I++ L P
Sbjct: 435 EEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL--PEHALAPPSG 492
Query: 528 GSSECIVDIRGSSEHLISAHGTYQSFMTS 556
G E V I G + SA ++ M S
Sbjct: 493 GDEETPVHIIGPFYSVQSAQRRIRAMMLS 521
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERVIRASAFEGLW 454
A+F ++IL + +G +IG+ G ++ + Q++ A + V S E+ I
Sbjct: 141 ADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITI-----YG 195
Query: 455 NPRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
NP + T IL++ + + + KG I ++L ++ +G I+G+ G+ I + + T
Sbjct: 196 NPENCTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 255
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSY 567
I V + D + + E I+ ++G E++ A QS+ Q+M Q +
Sbjct: 256 ITVSS----INDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMF 311
Query: 568 QNINP 572
++P
Sbjct: 312 PGLHP 316
>gi|432881653|ref|XP_004073885.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like isoform 1 [Oryzias latipes]
Length = 585
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 95/402 (23%), Positives = 164/402 (40%), Gaps = 81/402 (20%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKI 184
+D R+L P++ +G +IGK G ++++ ++T +KI + G+ E+ I I+S+P
Sbjct: 193 SDIPLRVLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITIHSTPEGC 252
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
+K A T E M+ ++AL D I ++
Sbjct: 253 SK--------ACTTIMEIMQ-----KEAL-------------------DTKFTEEIPLKI 280
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L NN VG L+GK G ++++ +TG I + P L N + + + G RA
Sbjct: 281 LAHNNFVGRLIGKEGRNLKKIEQDTGTKITISPLQDL--TLYNPERTITVKGSIEACSRA 338
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN--SSWPARNSSLHGM 362
EV + + D N S P +++ LG S P S+
Sbjct: 339 EEEVMKKVREAYESD---------MAAMNLQSNLIPGLNLNALGLFPSGTPGMGPSMSNF 389
Query: 363 PSTPWMGG---YGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
P + GG +G QP ++ + A +G +IGK G +
Sbjct: 390 PPSGAHGGCSSFGGQPESE--------------------TVHLFIPALAVGAIIGKQGQH 429
Query: 420 VKQLQQETGASIHVEDAP-TDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS--- 475
+KQL GASI + A D+ +R++ + P A ++ K E +
Sbjct: 430 IKQLSHFAGASIKIAPAEGMDAKQRMVI------IVGPPEAQFKAQCRIFGKLKEENFFG 483
Query: 476 --EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + + VPS G ++G+GG +NE++ T A++ V
Sbjct: 484 PKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEVVV 525
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 39/194 (20%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP-GSEERVIII 177
SFG ++TV+ + P+ +G +IGK G +K L A I +A +++R++II
Sbjct: 400 SFGGQPESETVH-LFIPALAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGMDAKQRMVII 458
Query: 178 YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN 237
P K Q ++ ++ EE+ FG E
Sbjct: 459 VGPPEAQFKAQ-------------------------CRIFGKLKEENFFG------PKEE 487
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG- 296
+ A + VP+ G ++GK G + L++ T A + V+P D+ P N +V+ISG
Sbjct: 488 VKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEV-VVPRDQTPD--ENDQVIVKISGH 544
Query: 297 --KPNVAKRALYEV 308
+A+R + E+
Sbjct: 545 FFACQLAQRKIQEI 558
>gi|195350752|ref|XP_002041902.1| GM11285 [Drosophila sechellia]
gi|194123707|gb|EDW45750.1| GM11285 [Drosophila sechellia]
Length = 566
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 196/449 (43%), Gaps = 76/449 (16%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G + AD RIL S +G +IG+ G+ ++++ ++++A++ V + + GS E+ I IY
Sbjct: 71 GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV-GSLEKSITIY 129
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P ++ +A + E M+ Q+A+ S + E
Sbjct: 130 GNP--------ENCTNACKRILEVMQ-----QEAI-----------------STNKGE-- 157
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
I ++L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G
Sbjct: 158 -ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--NSFNLERIITVKGLI 214
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS 358
RA ++ST L Q+ D QA Q+ P +HP+ S P
Sbjct: 215 ENMSRAENQISTKLRQSYENDL------QAMAPQSLMFP-----GLHPMAMMSTPG---- 259
Query: 359 LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
+GM M Q M + PP ++ + I +A +G +IG G
Sbjct: 260 -NGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNA--VGAIIGTKGS 316
Query: 419 NVKQLQQETGASIHVEDAPTDSDE--------RVIRASAFEGLWNPRSQTIDAILQLQNK 470
+++ + + + AS+ + AP D+D+ +V EG W + + + +
Sbjct: 317 HIRSIMRFSNASLKI--APLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKM-----R 369
Query: 471 TSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP 527
F ++ +T LLV SS+VG I+G+GG + E++R T + I++ L P
Sbjct: 370 EEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL--PEHALAPPSG 427
Query: 528 GSSECIVDIRGSSEHLISAHGTYQSFMTS 556
G E V I G + SA ++ M S
Sbjct: 428 GDEETPVHIIGLFYSVQSAQRRIRAMMLS 456
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP-TDSDERVIRASAFEGLW 454
A+F ++IL + +G +IG+ G ++ + Q++ A + V S E+ I
Sbjct: 76 ADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG----- 130
Query: 455 NPRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
NP + T IL++ + + + KG I ++L ++ +G I+G+ G+ I + + T
Sbjct: 131 NPENCTNACKRILEVMQQEAISTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 190
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSY 567
I V + D + + E I+ ++G E++ A QS+ Q+M Q +
Sbjct: 191 ITVSS----INDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMF 246
Query: 568 QNINP 572
++P
Sbjct: 247 PGLHP 251
>gi|332256670|ref|XP_003277439.1| PREDICTED: poly(rC)-binding protein 3 [Nomascus leucogenys]
Length = 393
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 163/401 (40%), Gaps = 107/401 (26%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHS----------------PPAP----- 340
+ ++ ++P K +P P+S P + G + PP P
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQ 253
Query: 341 ---------MADMH----------PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMG 379
+ +H PLG N ++P LH + G
Sbjct: 254 GQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ-------- 305
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
S +++ PP E++ + IG +IG+ G + +++Q +GA I + +A
Sbjct: 306 SSGLDASPPASTHELTIPNDL--------IGCIIGRQGTKINEIRQMSGAQIKIANATEG 357
Query: 440 SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
S ER I + P + ++ L TSE + GT+
Sbjct: 358 SSERQITITG-----TPANISLAQYLINARLTSEVTGMGTL 393
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAI 187
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 81
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 317 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 369
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 370 ANISLAQYLINARLTS 385
>gi|119629731|gb|EAX09326.1| poly(rC) binding protein 3, isoform CRA_d [Homo sapiens]
Length = 393
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 96/401 (23%), Positives = 163/401 (40%), Gaps = 107/401 (26%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHS----------------PPAP----- 340
+ ++ ++P K +P P+S P + G + PP P
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQ 253
Query: 341 ---------MADMH----------PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMG 379
+ +H PLG N ++P LH + G
Sbjct: 254 GQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ-------- 305
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
S +++ PP E++ + IG +IG+ G + +++Q +GA I + +A
Sbjct: 306 SSGLDASPPASTHELTIPNDL--------IGCIIGRQGTKINEIRQMSGAQIKIANATEG 357
Query: 440 SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
S ER I + P + ++ L TSE + GT+
Sbjct: 358 SSERQITITG-----TPANISLAQYLINARLTSEVTGMGTL 393
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAI 187
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 81
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 317 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 369
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 370 ANISLAQYLINARLTS 385
>gi|376338927|gb|AFB33992.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338929|gb|AFB33993.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338931|gb|AFB33994.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
gi|376338933|gb|AFB33995.1| hypothetical protein CL1760Contig1_01, partial [Larix decidua]
Length = 86
Score = 87.8 bits (216), Expect = 2e-14, Method: Composition-based stats.
Identities = 39/73 (53%), Positives = 54/73 (73%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
IT +LL+P+N GCLLGK G +I +R +T ANIR+LP + LPPCA+++DEMVQI G
Sbjct: 3 ITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPKEDLPPCALDSDEMVQIVGDIR 62
Query: 300 VAKRALYEVSTLL 312
A+ AL +V++ L
Sbjct: 63 AARAALVQVTSRL 75
Score = 58.2 bits (139), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 52/83 (62%), Gaps = 10/83 (12%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS------SE 531
G ITT+LL+PS++ GC+LG+GG +I+EMR++T+A+IR++ +D P + +
Sbjct: 1 GVITTKLLIPSNQTGCLLGKGGAIISEMRKQTRANIRILPK----EDLPPCALDSDEMVQ 56
Query: 532 CIVDIRGSSEHLISAHGTYQSFM 554
+ DIR + L+ +SF+
Sbjct: 57 IVGDIRAARAALVQVTSRLRSFI 79
>gi|56566054|gb|AAV98363.1| poly(rC) binding protein 3 [Homo sapiens]
Length = 361
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 97/402 (24%), Positives = 163/402 (40%), Gaps = 107/402 (26%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLV 246
DA+ K I EED+ M++ +T RL+V
Sbjct: 66 ---------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + +
Sbjct: 105 PASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHS----------------PPAP---- 340
++ ++ ++P K +P P+S P + G + PP P
Sbjct: 161 QICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTI 220
Query: 341 ----------MADMH----------PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRM 378
+ +H PLG N ++P LH + G
Sbjct: 221 QGQYAIPHPDLTKLHQLAMQQTPLPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ------- 273
Query: 379 GSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT 438
S +++ PP E++ + IG +IG+ G + +++Q +GA I + +A
Sbjct: 274 -SSGLDASPPASTHELTIPNDL--------IGCIIGRQGTKINEIRQMSGAQIKIANATE 324
Query: 439 DSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
S ER I + + I+A L TSE + GT+
Sbjct: 325 GSSERQITITGTPANISLAQYLINARL-----TSEVTGMGTL 361
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 47.0 bits (110), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAI 155
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 49
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 337
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 338 ANISLAQYLINARLTS 353
>gi|170036665|ref|XP_001846183.1| igf2 mRNA binding protein [Culex quinquefasciatus]
gi|167879496|gb|EDS42879.1| igf2 mRNA binding protein [Culex quinquefasciatus]
Length = 520
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 101/401 (25%), Positives = 177/401 (44%), Gaps = 72/401 (17%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIYSSPTKI 184
D R+L S +G +IG+ G+ ++ + + ++A++ V D + GS E+ I IY +P
Sbjct: 125 DFPLRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNV-GSLEKAITIYGNP--- 180
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS-TITAR 243
E+ C RI+E M + +N N I +
Sbjct: 181 ----------------ENCTSAC----------KRILEV-----MQQEANNTNKGEICLK 209
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G + R
Sbjct: 210 ILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN--SFNLERIITVKGSIDNMSR 267
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA-PMADMHPLGNSSWPARNSSLHGM 362
++S L Q+ D QA Q+ P PMA M GN A S ++
Sbjct: 268 GESQISAKLRQSYENDL------QALAPQSIMFPGLHPMAMMSTAGNGMGFAGRSGMYPG 321
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
S P QP + PPG +V + I +A +G +IG G +++
Sbjct: 322 SSYPMY-----QPP-----TAPGVPPGS-SDVQETTYLYIPNNA--VGAIIGTKGSHIRN 368
Query: 423 LQQETGASIHVEDAPTDSD----ERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG 478
+ + +GAS+ + AP ++D ++ R G P +Q L + E G
Sbjct: 369 IIRFSGASVKI--APLEADKPLEQQTERKVTIVG--TPEAQWKAQYLIFEKMREEGFVSG 424
Query: 479 T----ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
T +T +LVPS++VG I+G+GG + E++R T + I++
Sbjct: 425 TDDVRLTVEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKL 465
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 92/222 (41%), Gaps = 34/222 (15%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEER 173
+Q N+ + +IL + IG +IGK+GN +K + ++T KITV+ D + ER
Sbjct: 195 QQEANNTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNLER 254
Query: 174 VIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM---- 229
+I + S +++ +++ ++ + ++ +H + GM
Sbjct: 255 IITVKGSIDNMSRGESQISAKLRQSYENDLQALAPQSIMFPGLHPMAMMSTAGNGMGFAG 314
Query: 230 -----------------------ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLR 266
S D E T L +PNN VG ++G +G I+ +
Sbjct: 315 RSGMYPGSSYPMYQPPTAPGVPPGSSDVQE----TTYLYIPNNAVGAIIGTKGSHIRNII 370
Query: 267 SETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+GA++++ P + P T+ V I G P +A Y +
Sbjct: 371 RFSGASVKIAPLEADKPLEQQTERKVTIVGTPEAQWKAQYLI 412
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+F +++L ++ +G +IG+ G ++Q+ Q + A + V D+ + +A G NP
Sbjct: 125 DFPLRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRK--DNVGSLEKAITIYG--NP 180
Query: 457 RSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ T IL++ + + + KG I ++L ++ +G I+G+ G+ I + + T I
Sbjct: 181 ENCTSACKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 240
Query: 515 VVGARVKLQDPHPGSSECIVDIRGSSEHL 543
V + D + + E I+ ++GS +++
Sbjct: 241 VSS----INDINSFNLERIITVKGSIDNM 265
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 48/110 (43%), Gaps = 13/110 (11%)
Query: 339 APMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF 398
AP+ PL + R ++ G P W Y G ++ G
Sbjct: 380 APLEADKPLEQQT--ERKVTIVGTPEAQWKAQYLIFEKMREEGFVS-------GTDDVRL 430
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASI----HVEDAPTDSDERV 444
+++IL + ++G +IGKGG NV++LQ+ TG+ I H P D + V
Sbjct: 431 TVEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKLPEHTAATPVDEETTV 480
>gi|426218395|ref|XP_004003432.1| PREDICTED: poly(rC)-binding protein 3 isoform 1 [Ovis aries]
Length = 345
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 142/331 (42%), Gaps = 80/331 (24%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAP-MADMH----------PLG--NSSWPA 354
+ ++ +AY Q ++ P P + +H PLG N ++P
Sbjct: 194 ICVVML-------------EAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPG 240
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
LH + G S +++ PP E++ + IG +IG
Sbjct: 241 EKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL--------IGCIIG 284
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+ G + +++Q +GA I + +A S ER I
Sbjct: 285 RQGTKINEIRQMSGAQIKIANATEGSSERQI 315
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 40/245 (16%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAET---KKESMEPHCAAQDAL 213
A++ VA D +P S ER + I +P I + + E + + PH L
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPH----PDL 215
Query: 214 LKVHDRIIEEDLF--------------------------GGMASDDDNENSTITARLLVP 247
K+H +++ F G +S D T L +P
Sbjct: 216 TKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIP 275
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
N+++GC++G++G I +R +GA I++ A +++ + I+G P A Y
Sbjct: 276 NDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYL 330
Query: 308 VSTLL 312
++ L
Sbjct: 331 INARL 335
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 95
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 269 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 321
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 322 ANISLAQYLINARLTS 337
>gi|307189125|gb|EFN73581.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Camponotus
floridanus]
Length = 587
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 109/438 (24%), Positives = 189/438 (43%), Gaps = 91/438 (20%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G+ + D RIL S +G +IG+ G+ ++ + + ++A++ V D + GS E+ I IY
Sbjct: 140 GSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRKDNV-GSLEKAITIY 198
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P +C +A K+ D + +E AS + E
Sbjct: 199 GNP-----------------------ENCT--NACKKILDVMQQE-----AASTNKGE-- 226
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
IT ++L NN++G ++GK G+ I+R+ +T + I V + + + N + ++ + G
Sbjct: 227 -ITLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITVSSINDI--NSFNLERIITVKGTI 283
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS 358
+A +S+ L Q+ D QA Q+ P +HP+
Sbjct: 284 ENMSKAESMISSKLRQSYENDL------QAMAPQSMMFP-----GLHPMA---------- 322
Query: 359 LHGMPSTPWMGGYGDQPSRMGSGS----INSCPPGQMGEVSAEF--SMKILCSAGKIGGV 412
M ST MG P GSG S P Q G +++ + + +G +
Sbjct: 323 ---MMSTAGMGYSSRGPGLYGSGPAPYPYQSSLPTQQGVPASDTQETTFLYIPNNSVGAI 379
Query: 413 IGKGGFNVKQLQQETGASIHVEDAPTDSD----ERVIRASAFEGLWNPRSQTIDAILQLQ 468
IG G +++ + + +GAS+ + AP + D ++ R G +P SQ L +
Sbjct: 380 IGTKGSHIRNIIRFSGASVKI--APLEQDKPAEQQTERKVTIIG--SPESQWKAQYLIFE 435
Query: 469 NKTSEFSEKGT----ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQD 524
E GT +T +LVPS++VG I+G+GG + E++ RV G+ +KL +
Sbjct: 436 KMREEGYVAGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQ-------RVTGSVIKLSE 488
Query: 525 ----PHPGSSECIVDIRG 538
P E V I G
Sbjct: 489 QQATPPSAEEETTVHIIG 506
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 98/222 (44%), Gaps = 34/222 (15%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEER 173
+Q ++ + +IL + IG +IGK GN +K + ++T +KITV+ D + ER
Sbjct: 216 QQEAASTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITVSSINDINSFNLER 275
Query: 174 VIIIYSSPTKIAKT---------QNKDDDSAAETKKESMEP--HCAAQDALLKVHDRIIE 222
+I + + ++K Q+ ++D A + M P H A + +
Sbjct: 276 IITVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFPGLHPMAMMSTAGMGYSSRG 335
Query: 223 EDLFG----------------GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLR 266
L+G G+ + D E T L +PNN VG ++G +G I+ +
Sbjct: 336 PGLYGSGPAPYPYQSSLPTQQGVPASDTQE----TTFLYIPNNSVGAIIGTKGSHIRNII 391
Query: 267 SETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+GA++++ P ++ P T+ V I G P +A Y +
Sbjct: 392 RFSGASVKIAPLEQDKPAEQQTERKVTIIGSPESQWKAQYLI 433
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 90/183 (49%), Gaps = 15/183 (8%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+F ++IL + +G +IG+ G ++Q+ Q + A + V D+ + +A G NP
Sbjct: 146 DFPLRILVQSDMVGAIIGRQGSTIRQITQVSRARVDVHRK--DNVGSLEKAITIYG--NP 201
Query: 457 RSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ T IL + + + + KG IT ++L ++ +G I+G+GG+ I + + T + I
Sbjct: 202 ENCTNACKKILDVMQQEAASTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKIT 261
Query: 515 VVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSYQN 569
V + D + + E I+ ++G+ E++ A QS+ Q+M Q +
Sbjct: 262 V----SSINDINSFNLERIITVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFPG 317
Query: 570 INP 572
++P
Sbjct: 318 LHP 320
>gi|17530887|ref|NP_511111.1| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|24641108|ref|NP_727456.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|24641110|ref|NP_727457.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|7533029|gb|AAF63331.1|AF241237_1 IGF-II mRNA-binding protein [Drosophila melanogaster]
gi|17862978|gb|AAL39966.1| SD07045p [Drosophila melanogaster]
gi|22832057|gb|AAF47958.2| IGF-II mRNA-binding protein, isoform A [Drosophila melanogaster]
gi|22832058|gb|AAN09274.1| IGF-II mRNA-binding protein, isoform B [Drosophila melanogaster]
gi|22832059|gb|AAN09275.1| IGF-II mRNA-binding protein, isoform C [Drosophila melanogaster]
gi|220947510|gb|ACL86298.1| Imp-PA [synthetic construct]
gi|220956906|gb|ACL90996.1| Imp-PA [synthetic construct]
Length = 566
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 108/448 (24%), Positives = 194/448 (43%), Gaps = 74/448 (16%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
G + AD RIL S +G +IG+ G+ ++++ ++++A++ V GS E+ I IY
Sbjct: 71 GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG 130
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P ++ +A + E M+ Q+A+ S + E
Sbjct: 131 NP--------ENCTNACKRILEVMQ-----QEAI-----------------STNKGE--- 157
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
I ++L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G
Sbjct: 158 ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--NSFNLERIITVKGLIE 215
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA ++ST L Q+ D QA Q+ P +HP+ S P
Sbjct: 216 NMSRAENQISTKLRQSYENDL------QAMAPQSLMFP-----GLHPMAMMSTPG----- 259
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+GM M Q M + PP ++ + I +A +G +IG G +
Sbjct: 260 NGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNA--VGAIIGTRGSH 317
Query: 420 VKQLQQETGASIHVEDAPTDSDE--------RVIRASAFEGLWNPRSQTIDAILQLQNKT 471
++ + + + AS+ + AP D+D+ +V EG W + + + +
Sbjct: 318 IRSIMRFSNASLKI--APLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKM-----RE 370
Query: 472 SEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPG 528
F ++ +T LLV SS+VG I+G+GG + E++R T + I++ L P G
Sbjct: 371 EGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL--PEHALAPPSGG 428
Query: 529 SSECIVDIRGSSEHLISAHGTYQSFMTS 556
E V I G + SA ++ M S
Sbjct: 429 DEETPVHIIGLFYSVQSAQRRIRAMMLS 456
Score = 47.8 bits (112), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP-TDSDERVIRASAFEGLW 454
A+F ++IL + +G +IG+ G ++ + Q++ A + V S E+ I
Sbjct: 76 ADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG----- 130
Query: 455 NPRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
NP + T IL++ + + + KG I ++L ++ +G I+G+ G+ I + + T
Sbjct: 131 NPENCTNACKRILEVMQQEAISTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 190
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSY 567
I V + D + + E I+ ++G E++ A QS+ Q+M Q +
Sbjct: 191 ITVSS----INDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMF 246
Query: 568 QNINP 572
++P
Sbjct: 247 PGLHP 251
>gi|301771920|ref|XP_002921378.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 2 [Ailuropoda melanoleuca]
Length = 582
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 102/411 (24%), Positives = 176/411 (42%), Gaps = 72/411 (17%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M P S ++ + A +
Sbjct: 375 -LFPPTS----GMP--PPTSG---PPSAMTP----PYPHNSFTRSSETETVHLFIPALSV 420
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 421 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 475
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 476 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 526
>gi|157114471|ref|XP_001652287.1| igf2 mRNA binding protein, putative [Aedes aegypti]
gi|108877277|gb|EAT41502.1| AAEL006876-PA [Aedes aegypti]
Length = 541
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 99/401 (24%), Positives = 177/401 (44%), Gaps = 72/401 (17%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIYSSPTKI 184
D R+L S +G +IG+ G+ ++ + + ++A++ V D + GS E+ I IY +P
Sbjct: 126 DFPLRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRKDNV-GSLEKAITIYGNP--- 181
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS-TITAR 243
E+ C RI+E M + +N N I +
Sbjct: 182 ----------------ENCTSAC----------KRILEV-----MQQEANNTNKGEICLK 210
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G + R
Sbjct: 211 ILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--NSFNLERIITVKGSIDNMSR 268
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA-PMADMHPLGNSSWPARNSSLHGM 362
++S L Q+ D QA Q+ P PMA M GN + ++
Sbjct: 269 GESQISAKLRQSYENDL------QALAPQSIMFPGLHPMAMMSTAGNGMGFTGRTGMYPG 322
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
S P QP ++ PPG +V + I +A +G +IG G +++
Sbjct: 323 TSYPMY-----QPP-----TVPGAPPGS-SDVQETTYLYIPNNA--VGAIIGTKGSHIRN 369
Query: 423 LQQETGASIHVEDAPTDSD----ERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG 478
+ + +GAS+ + AP ++D ++ R G P +Q L + E G
Sbjct: 370 IIRFSGASVKI--APLEADKPLEQQTERKVTIVG--TPEAQWKAQYLIFEKMREEGFVSG 425
Query: 479 T----ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
T +T +LVPS++VG I+G+GG + E++R T + I++
Sbjct: 426 TDDVRLTVEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKL 466
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/222 (22%), Positives = 92/222 (41%), Gaps = 34/222 (15%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEER 173
+Q N+ + +IL + IG +IGK+GN +K + ++T KITV+ D + ER
Sbjct: 196 QQEANNTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDINSFNLER 255
Query: 174 VIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM---- 229
+I + S +++ +++ ++ + ++ +H + GM
Sbjct: 256 IITVKGSIDNMSRGESQISAKLRQSYENDLQALAPQSIMFPGLHPMAMMSTAGNGMGFTG 315
Query: 230 -----------------------ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLR 266
S D E T L +PNN VG ++G +G I+ +
Sbjct: 316 RTGMYPGTSYPMYQPPTVPGAPPGSSDVQE----TTYLYIPNNAVGAIIGTKGSHIRNII 371
Query: 267 SETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+GA++++ P + P T+ V I G P +A Y +
Sbjct: 372 RFSGASVKIAPLEADKPLEQQTERKVTIVGTPEAQWKAQYLI 413
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 77/149 (51%), Gaps = 10/149 (6%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+F +++L ++ +G +IG+ G ++Q+ Q + A + V D+ + +A G NP
Sbjct: 126 DFPLRLLVASEMVGAIIGRQGSTIRQITQNSRARVDVHRK--DNVGSLEKAITIYG--NP 181
Query: 457 RSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ T IL++ + + + KG I ++L ++ +G I+G+ G+ I + + T I
Sbjct: 182 ENCTSACKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 241
Query: 515 VVGARVKLQDPHPGSSECIVDIRGSSEHL 543
V + D + + E I+ ++GS +++
Sbjct: 242 V----SSINDINSFNLERIITVKGSIDNM 266
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 49/110 (44%), Gaps = 13/110 (11%)
Query: 339 APMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF 398
AP+ PL + R ++ G P W Y G ++ G
Sbjct: 381 APLEADKPLEQQT--ERKVTIVGTPEAQWKAQYLIFEKMREEGFVS-------GTDDVRL 431
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASI----HVEDAPTDSDERV 444
+++IL + ++G +IGKGG NV++LQ+ TG+ I H + P D + V
Sbjct: 432 TVEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKLPEHTTNTPVDEETTV 481
>gi|357449597|ref|XP_003595075.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355484123|gb|AES65326.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 470
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 101/191 (52%), Gaps = 34/191 (17%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P K+GG+IG+ G+++K L +ET+A++ V D G +R+I+I
Sbjct: 67 PGDCVFRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILI------- 119
Query: 185 AKTQNKDDDSAAETKKESMEPHCA-AQDALLKVHDRIIEEDLFGGMASDDDNEN------ 237
+ KE +E + A DA++++ R+ G+ S+ D+EN
Sbjct: 120 -------------SGKEELEAAISPAMDAVIRIFKRV------SGL-SETDSENKGPAGV 159
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
+ + RLLV + L+GK+G +I+ ++ +GA++RVL D + A + +V + G+
Sbjct: 160 TLCSIRLLVASTQAISLIGKQGTIIRSIQESSGASVRVLSGDEVQYFATAEERIVDLQGE 219
Query: 298 PNVAKRALYEV 308
+ +AL V
Sbjct: 220 ALMVLKALEAV 230
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 94/190 (49%), Gaps = 18/190 (9%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ GK+GG+IG+ G +K+L ET A + V DA +R+I S E L S
Sbjct: 72 FRLIVPVGKVGGIIGRKGDLIKKLCDETKARVRVLDADLGIPDRIILISGKEELEAAISP 131
Query: 460 TIDAILQLQNKTSEFSE-----KG-----TITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
+DA++++ + S SE KG + RLLV S++ ++G+ G +I ++ +
Sbjct: 132 AMDAVIRIFKRVSGLSETDSENKGPAGVTLCSIRLLVASTQAISLIGKQGTIIRSIQESS 191
Query: 510 QADIRVV-GARVKLQDPHPGSSECIVDIRGSSEHLISAH----GTYQSFMTSGQSMKVQP 564
A +RV+ G V+ + E IVD++G + ++ A G + F+ + V
Sbjct: 192 GASVRVLSGDEVQY---FATAEERIVDLQGEALMVLKALEAVIGHLRKFLVDHSILPVYE 248
Query: 565 SSYQNINPQQ 574
+Y PQQ
Sbjct: 249 KTYNASLPQQ 258
>gi|194762728|ref|XP_001963486.1| GF20264 [Drosophila ananassae]
gi|190629145|gb|EDV44562.1| GF20264 [Drosophila ananassae]
Length = 590
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 109/449 (24%), Positives = 196/449 (43%), Gaps = 76/449 (16%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G + AD RIL S +G +IG+ G+ ++++ ++++A++ V + + GS E+ I IY
Sbjct: 78 GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV-GSVEKSITIY 136
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P ++ +A + E M+ Q+AL S + E
Sbjct: 137 GNP--------ENCTNACKRILEVMQ-----QEAL-----------------STNKGE-- 164
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
I ++L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G
Sbjct: 165 -ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--NSFNLERIITVKGLI 221
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS 358
RA ++ST L Q+ D QA Q+ P +HP+ S P
Sbjct: 222 ENMSRAENQISTKLRQSYENDL------QAMAPQSLMFP-----GLHPMAMMSTPG---- 266
Query: 359 LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
+GM M Q M + PP ++ + I +A +G +IG G
Sbjct: 267 -NGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTFLYIPNNA--VGAIIGTKGS 323
Query: 419 NVKQLQQETGASIHVEDAPTDSDE--------RVIRASAFEGLWNPRSQTIDAILQLQNK 470
+++ + + + AS+ + AP D+D+ +V EG W + + + +
Sbjct: 324 HIRSIMRFSNASLKI--APLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKM-----R 376
Query: 471 TSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP 527
F ++ +T LLV SS+VG I+G+GG + E++R T + I++ L P
Sbjct: 377 EEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL--PEHALAPPSG 434
Query: 528 GSSECIVDIRGSSEHLISAHGTYQSFMTS 556
G E V I G + SA ++ M S
Sbjct: 435 GDEETPVHIIGPFYSVQSAQRRIRAMMLS 463
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP-TDSDERVIRASAFEGLW 454
A+F ++IL + +G +IG+ G ++ + Q++ A + V S E+ I
Sbjct: 83 ADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSVEKSITIYG----- 137
Query: 455 NPRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
NP + T IL++ + + + KG I ++L ++ +G I+G+ G+ I + + T
Sbjct: 138 NPENCTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 197
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSY 567
I V + D + + E I+ ++G E++ A QS+ Q+M Q +
Sbjct: 198 ITV----SSINDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMF 253
Query: 568 QNINP 572
++P
Sbjct: 254 PGLHP 258
>gi|348519763|ref|XP_003447399.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 4 [Oreochromis niloticus]
Length = 584
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 95/403 (23%), Positives = 174/403 (43%), Gaps = 70/403 (17%)
Query: 120 FGNSQPA--DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVII 176
+G+ +P D R+L P++ +G +IGK GN +K + ++TQ+K+ + G+ E+ I
Sbjct: 189 YGSPRPRQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPIT 248
Query: 177 IYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE 236
I+S+P E AA +L + + +++
Sbjct: 249 IHSTP----------------------EGCSAACRMILDIMQK----------EANETKT 276
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
I ++L N++VG L+GK G ++++ +TG I + L N + + + G
Sbjct: 277 TEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITISSLQDL--TIYNPERTITVKG 334
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN 356
+ +A E++ L + ++ N + P +++ LG S
Sbjct: 335 SIDACCKAEVEITKKLRE---------AYENDIAAINQQANLIPGLNLNALGIFS----- 380
Query: 357 SSLHGMPSTPWMGGYGDQPSRM--GSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
G+P P G P+R+ S ++ P Q EV + + +G +IG
Sbjct: 381 ---SGLPVLPPAAG---PPTRIPPSSPEMSQSAPEQ--EV-----VYLFIPTQAVGALIG 427
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF 474
K G ++KQL GASI + AP +S + R G + + I + + F
Sbjct: 428 KKGQHIKQLAHFAGASIKI--APAESPDVTERMVIITGTPEAQFKAQGRIFGKLKEENFF 485
Query: 475 S--EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
S E+ + T + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 486 SAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIV 528
>gi|345309017|ref|XP_001516066.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Ornithorhynchus anatinus]
Length = 679
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 104/445 (23%), Positives = 182/445 (40%), Gaps = 93/445 (20%)
Query: 97 QFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREE 156
Q R+G ++G + SS + +P D RIL P++ +G +IGK G +K+L ++
Sbjct: 246 QRTRRGGHSREQGQYPGSSTQ-----PKPLDFPLRILVPTQFVGAIIGKEGLTIKNLTKQ 300
Query: 157 TQAKITV-ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLK 215
TQ+K+ + G+ E+ I I+++P E A +L+
Sbjct: 301 TQSKVDIHRKENAGAAEKPITIHATP----------------------EGSSEACRLILE 338
Query: 216 VHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
+ + +D+ I ++L N++VG L+GK G ++++ +TG I +
Sbjct: 339 IMQK----------EADETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITI 388
Query: 276 LPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFH 335
P L N + + + G A E+ L + D N
Sbjct: 389 SPLQDL--TIYNPERTITVKGSIEACSNAEVEIMKKLREAYEND---------VVAVNQQ 437
Query: 336 SPPAPMADMHPLGNSSWPARNSSLHGMPST-------------------PWMGG-YGDQP 375
+ P ++ LG S + L +PST P++ G YG
Sbjct: 438 ANLIPGLNLSALGIFS-----TGLSMLPSTAGPHGATAASPYNPFASHSPYLSGLYG--A 490
Query: 376 SRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-- 433
SR+G+ P Q EV + + +G +IGK G ++KQL + GASI +
Sbjct: 491 SRVGAFPHQHSVPEQ--EV-----VNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAP 543
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSK 490
+ P S+ VI E + + + + K F E+ + + VPSS
Sbjct: 544 AEGPDASERMVIITGPPEAQFKAQGRIFGKL-----KEENFFNPKEEVKLEAHIKVPSSA 598
Query: 491 VGCILGQGGHVINEMRRRTQADIRV 515
G ++G+GG +NE++ T A++ V
Sbjct: 599 AGRVIGKGGKTVNELQNLTSAEVIV 623
>gi|390478281|ref|XP_002761548.2| PREDICTED: poly(rC)-binding protein 3 [Callithrix jacchus]
Length = 393
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 150/366 (40%), Gaps = 102/366 (27%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHS----------------PPAP----- 340
+ ++ ++P K +P P+S P + G + PP P
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQ 253
Query: 341 ---------MADMH----------PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMG 379
+ +H PLG N ++P LH + G
Sbjct: 254 GQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ-------- 305
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
S +++ PP E++ + IG +IG+ G + +++Q +GA I + +A
Sbjct: 306 SSGLDASPPASTHELTIPNDL--------IGCIIGRQGTKINEIRQMSGAQIKIANATEG 357
Query: 440 SDERVI 445
S ER I
Sbjct: 358 SSERQI 363
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 111/289 (38%), Gaps = 80/289 (27%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVAD-----------TIPGSEERVI-------------------IIY-----SSPT 182
A++ VA TI G+ + +I I Y S+P
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 219
Query: 183 KIAKTQNKDDDSAAETKKESM---EPHCAAQDA----------LLKVHDRIIEEDLF--- 226
A Q + D AA T S+ P A L K+H +++ F
Sbjct: 220 IFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPL 279
Query: 227 -----------------------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
G +S D T L +PN+++GC++G++G I
Sbjct: 280 GQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 339
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+R +GA I++ A +++ + I+G P A Y ++ L
Sbjct: 340 EIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 383
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 81
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 317 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 369
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 370 ANISLAQYLINARLTS 385
>gi|301604860|ref|XP_002932078.1| PREDICTED: poly(rC)-binding protein 3-like [Xenopus (Silurana)
tropicalis]
Length = 339
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 90/344 (26%), Positives = 150/344 (43%), Gaps = 80/344 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASAPVIFAGGQAYSIQGQYAIPHPDQLTKLHQLAMQQTP 221
Query: 346 --PLGNSS--WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG ++ +P LH + G Q + M + S S + +
Sbjct: 222 FTPLGQTTPAFPGEKLPLHSSEEAQNLMG---QSAGMDASSQAS-------------THE 265
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+ IG +IG+ G + +++Q +GA I + A S ER I
Sbjct: 266 LTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIASAMEGSAERQI 309
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++ +
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT 65
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + D I + N T+ + K +T RL+VP+S+ G ++G+GG I
Sbjct: 66 DAIFKAFAMIAYKFEE--DIINSMSNSTA--TSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 122 EIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 60/270 (22%), Positives = 107/270 (39%), Gaps = 64/270 (23%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASAPV 187
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG--------------------- 227
A + + PH D L K+H +++ F
Sbjct: 188 IFAGGQAYSIQGQYAIPH---PDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEE 244
Query: 228 -----GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
G ++ D + T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 245 AQNLMGQSAGMDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIASA---- 300
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+ + + I+G P A Y ++ L
Sbjct: 301 -MEGSAERQITITGSPANISLAQYLINARL 329
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 49
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 13/77 (16%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS- 539
T L +P+ +GCI+G+ G INE+R+ + GA++K+ GS+E + I GS
Sbjct: 263 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIASAMEGSAERQITITGSP 315
Query: 540 -----SEHLISAHGTYQ 551
+++LI+A T +
Sbjct: 316 ANISLAQYLINARLTSE 332
>gi|345497208|ref|XP_001599286.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Nasonia vitripennis]
Length = 643
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 114/467 (24%), Positives = 194/467 (41%), Gaps = 100/467 (21%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G + D RIL S +G +IG+ G+ ++ + + T+A++ V D + GS E+ I IY
Sbjct: 181 GAGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNL-GSLEKAITIY 239
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN- 237
+P E+ C +I+E M + N N
Sbjct: 240 GNP-------------------ENCTNAC----------KKILEV-----MHQEASNTNK 265
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
IT ++L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G
Sbjct: 266 GEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDI--NSFNLERIITVKGS 323
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
+A +S L Q+ D QA Q+ P +HP+
Sbjct: 324 IENMSKAEAMISNKLRQSYENDL------QAMAPQSMMFP-----GLHPMA--------- 363
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSI------NSCPPGQMGEVSAEFSMKILCSAGKIGG 411
M ST MG P+ G+G N P + A+ + + +G
Sbjct: 364 ----MMSTASMGYNSRGPALYGTGPAPYPYQSNLTPQQGVLTSDAQETTFLYIPNNSVGA 419
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTDSD----ERVIRASAFEGLWNPRSQTIDAILQL 467
+IG G +++ + + +GAS+ + AP +SD ++ R G +P SQ L
Sbjct: 420 IIGTKGSHIRNIIRFSGASVKI--APLESDKPAEQQTERKVTIVG--SPESQWKAQYLIF 475
Query: 468 QNKTSEFSEKGT----ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ 523
+ E GT +T +LVPS++VG I+G+GG + E++ RV G+ +KL
Sbjct: 476 EKMREEGFVSGTEDVRLTVEILVPSAQVGRIIGKGGQNVRELQ-------RVTGSVIKLS 528
Query: 524 D----PHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSS 566
+ P E V H+I + QS ++M VQP +
Sbjct: 529 EQQATPPTADEETTV-------HIIGPFFSVQSAQRRIRAMVVQPGA 568
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 107/226 (47%), Gaps = 23/226 (10%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+F ++IL + +G +IG+ G ++Q+ Q T A + V D+ + +A G NP
Sbjct: 187 DFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRK--DNLGSLEKAITIYG--NP 242
Query: 457 RSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ T IL++ ++ + + KG IT ++L ++ +G I+G+GG+ I + + T I
Sbjct: 243 ENCTNACKKILEVMHQEASNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKIT 302
Query: 515 VVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSYQN 569
V + D + + E I+ ++GS E++ A QS+ Q+M Q +
Sbjct: 303 V----SSINDINSFNLERIITVKGSIENMSKAEAMISNKLRQSYENDLQAMAPQSMMFPG 358
Query: 570 INPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQ-NINPQQ 614
++P M+ ++ N++ + PYQ N+ PQQ
Sbjct: 359 LHP-------MAMMSTASMGYNSRGPALYGTGPAPYPYQSNLTPQQ 397
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 95/221 (42%), Gaps = 34/221 (15%)
Query: 118 QSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERV 174
Q N+ + +IL + IG +IGK GN +K + ++T KITV+ D + ER+
Sbjct: 258 QEASNTNKGEITLKILAHNNLIGRIIGKGGNTIKRIMQDTDTKITVSSINDINSFNLERI 317
Query: 175 IIIYSSPTKIAKT---------QNKDDDSAAETKKESMEP--HCAAQDALLKVHDRIIEE 223
I + S ++K Q+ ++D A + M P H A + +
Sbjct: 318 ITVKGSIENMSKAEAMISNKLRQSYENDLQAMAPQSMMFPGLHPMAMMSTASMGYNSRGP 377
Query: 224 DLFG----------------GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRS 267
L+G G+ + D E T L +PNN VG ++G +G I+ +
Sbjct: 378 ALYGTGPAPYPYQSNLTPQQGVLTSDAQE----TTFLYIPNNSVGAIIGTKGSHIRNIIR 433
Query: 268 ETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+GA++++ P + P T+ V I G P +A Y +
Sbjct: 434 FSGASVKIAPLESDKPAEQQTERKVTIVGSPESQWKAQYLI 474
Score = 39.7 bits (91), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 79/190 (41%), Gaps = 38/190 (20%)
Query: 112 SNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIP 168
SN + +Q S +T + + P+ +G +IG G+ ++++ + A + +A P
Sbjct: 391 SNLTPQQGVLTSDAQETTF-LYIPNNSVGAIIGTKGSHIRNIIRFSGASVKIAPLESDKP 449
Query: 169 GSE--ERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
+ ER + I SP K Q + +++ EE
Sbjct: 450 AEQQTERKVTIVGSPESQWKAQ-------------------------YLIFEKMREEGFV 484
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
G E+ +T +LVP+ VG ++GK G ++ L+ TG+ I++ PP A
Sbjct: 485 SG------TEDVRLTVEILVPSAQVGRIIGKGGQNVRELQRVTGSVIKLSEQQATPPTA- 537
Query: 287 NTDEMVQISG 296
+ + V I G
Sbjct: 538 DEETTVHIIG 547
>gi|395851184|ref|XP_003798146.1| PREDICTED: poly(rC)-binding protein 3 [Otolemur garnettii]
Length = 361
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 150/366 (40%), Gaps = 102/366 (27%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIVNSMSNSPATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHS----------------PPAP----- 340
+ ++ ++P K +P P+S P + G + PP P
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQ 221
Query: 341 ---------MADMH----------PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMG 379
+ +H PLG N ++P LH + G
Sbjct: 222 GQYAIPHPDLTKLHQLAMQQTPFPPLGQANPAFPGEKLPLHSSEEAQNLMGQ-------- 273
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
S +++ PP E++ + IG +IG+ G + +++Q +GA I + +A
Sbjct: 274 SSGLDASPPASTHELTIPNDL--------IGCIIGRQGTKINEIRQMSGAQIKIANATEG 325
Query: 440 SDERVI 445
S ER I
Sbjct: 326 SSERQI 331
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDIVNSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 111/289 (38%), Gaps = 80/289 (27%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIVNSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVAD-----------TIPGSEERVI-------------------IIY-----SSPT 182
A++ VA TI G+ + +I I Y S+P
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 187
Query: 183 KIAKTQNKDDDSAAETKKESM---EPHCAAQDA----------LLKVHDRIIEEDLF--- 226
A Q + D AA T S+ P A L K+H +++ F
Sbjct: 188 IFAGGQVRADPLAASTANLSLLLQHPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPL 247
Query: 227 -----------------------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
G +S D T L +PN+++GC++G++G I
Sbjct: 248 GQANPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 307
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+R +GA I++ A +++ + I+G P A Y ++ L
Sbjct: 308 EIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 351
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 49
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 337
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 338 ANISLAQYLINARLTS 353
>gi|354490712|ref|XP_003507500.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Cricetulus griseus]
Length = 731
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 176/411 (42%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 331 SSRQASPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTG 390
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD ++ EE
Sbjct: 391 AAEKPITILSTP--------EGASAACKSILEIM--HKEAQDT------KLTEE------ 428
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
+ ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 429 ----------VPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 476
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G RA E+ + + S+ N + P +++ LG
Sbjct: 477 RTITVKGNVETCARAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 526
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P P++ PS M PP E S ++ + A +
Sbjct: 527 -LFP---------PTSGMPPPTSGPPSTM-------TPPYPQFEQSETETVHLFIPALSV 569
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 570 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 624
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 625 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 675
>gi|357147442|ref|XP_003574345.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 1-like
[Brachypodium distachyon]
Length = 447
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/196 (32%), Positives = 100/196 (51%), Gaps = 28/196 (14%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D+V+R++ P K+G +IG+ G ++K L EET+A++ V D G+ ERV+++
Sbjct: 44 PGDSVFRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLV------- 96
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS----TI 240
S E + P A DAL++V R+ + +A+D + +
Sbjct: 97 ---------SGKEEPGLDLPP---AMDALIRVFKRV---NGITDVAADSTTQTAAPPGVC 141
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD-RLPPCAMNTDE-MVQISGKP 298
ARLLVP L+GK+G I+ ++ TGA IRV+ D R P + DE +V+I G+
Sbjct: 142 AARLLVPGAQAINLIGKQGASIKAIQEGTGATIRVISIDERERPFYVTDDERIVEIQGET 201
Query: 299 NVAKRALYEVSTLLHQ 314
+AL VS L +
Sbjct: 202 EKVLKALQAVSNHLRK 217
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 82/161 (50%), Gaps = 16/161 (9%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE--GLWNPR 457
+++ K+G +IG+ G +K+L +ET A + V D P + ERV+ S E GL P
Sbjct: 49 FRMVVPVXKVGSIIGRKGELIKRLVEETKARVRVLDGPVGATERVVLVSGKEEPGLDLPP 108
Query: 458 SQTIDAILQLQNKTSEFSEK------------GTITTRLLVPSSKVGCILGQGGHVINEM 505
+ +DA++++ + + ++ G RLLVP ++ ++G+ G I +
Sbjct: 109 A--MDALIRVFKRVNGITDVAADSTTQTAAPPGVCAARLLVPGAQAINLIGKQGASIKAI 166
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
+ T A IRV+ + + + E IV+I+G +E ++ A
Sbjct: 167 QEGTGATIRVISIDERERPFYVTDDERIVEIQGETEKVLKA 207
>gi|348519759|ref|XP_003447397.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Oreochromis niloticus]
Length = 581
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 91/401 (22%), Positives = 170/401 (42%), Gaps = 69/401 (17%)
Query: 120 FGNSQPA--DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVII 176
+G+ +P D R+L P++ +G +IGK GN +K + ++TQ+K+ + G+ E+ I
Sbjct: 189 YGSPRPRQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPIT 248
Query: 177 IYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE 236
I+S+P E AA +L + + +++
Sbjct: 249 IHSTP----------------------EGCSAACRMILDIMQK----------EANETKT 276
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
I ++L N++VG L+GK G ++++ +TG I + L N + + + G
Sbjct: 277 TEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITISSLQDL--TIYNPERTITVKG 334
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN 356
+ +A E++ L + ++ N + P +++ LG S
Sbjct: 335 SIDACCKAEVEITKKLRE---------AYENDIAAINQQANLIPGLNLNALGIFS----- 380
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
G+P P P+ ++ + P Q E + + +G +IGK
Sbjct: 381 ---SGLPVLP--------PAAGPRSAVPAVAPQQAPEQEVVY---LFIPTQAVGALIGKK 426
Query: 417 GFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS- 475
G ++KQL GASI + AP +S + R G + + I + + FS
Sbjct: 427 GQHIKQLAHFAGASIKI--APAESPDVTERMVIITGTPEAQFKAQGRIFGKLKEENFFSA 484
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 485 KEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIV 525
>gi|355560757|gb|EHH17443.1| hypothetical protein EGK_13854 [Macaca mulatta]
gi|355747773|gb|EHH52270.1| hypothetical protein EGM_12689 [Macaca fascicularis]
Length = 583
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 104/413 (25%), Positives = 178/413 (43%), Gaps = 77/413 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ + A +
Sbjct: 375 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSV 417
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 472
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHV--INEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 473 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTAKVNELQNLSSAEVVV 525
>gi|348518109|ref|XP_003446574.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 349
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 87/341 (25%), Positives = 149/341 (43%), Gaps = 72/341 (21%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +RE++ A+I +++ ER++ I + PT
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIVTI-TGPT-------- 67
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 68 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 107
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P + + +
Sbjct: 108 ASQCGSLIGKGGSKIKEMRESTGAQVQV-AGDMLP---NSTERAVTISGAPEAIIQCVKQ 163
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL-- 359
+ +L ++P K +P P+S P + G + PLG S+ N SL
Sbjct: 164 ICVVLLESPPKGATIPYRPKPASTPVIFSGGQVRA--------DPLGASTA---NLSLLL 212
Query: 360 --HGMPSTPWMGGYG---DQPSRMGSGSINSCPPGQMGEVSAEF----------SMKILC 404
+P+ G Y S++ ++ P +G+ + F + ++
Sbjct: 213 QHQPLPAYTIQGQYAIPHPDLSKLHQLAMQQTPFTPLGQTTPAFPGLDASNQASTHELTI 272
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 273 PNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQI 313
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++++GA I++ + + ER++
Sbjct: 10 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIVT----- 62
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 63 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 121
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I EMR T A ++V G D P S+E V I G+ E +I
Sbjct: 122 IKEMRESTGAQVQVAG------DMLPNSTERAVTISGAPEAII 158
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 60/266 (22%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEMREST 129
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKT----------------------------- 187
A++ VA D +P S ER + I +P I +
Sbjct: 130 GAQVQVAGDMLPNSTERAVTISGAPEAIIQCVKQICVVLLESPPKGATIPYRPKPASTPV 189
Query: 188 -----QNKDDDSAAETKKESM----EP---------HCAAQDALLKVHDRIIEEDLFGGM 229
Q + D A T S+ +P + L K+H +++ F +
Sbjct: 190 IFSGGQVRADPLGASTANLSLLLQHQPLPAYTIQGQYAIPHPDLSKLHQLAMQQTPFTPL 249
Query: 230 ASDD------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP 283
D N T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 250 GQTTPAFPGLDASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANA----- 304
Query: 284 CAMNTDEMVQISGKPNVAKRALYEVS 309
+++ + I+G P A Y ++
Sbjct: 305 MEGSSERQITITGTPANISLAQYLIN 330
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 7/87 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 267 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANAMEGSSERQITITGTP 319
Query: 541 EHLISAHGTYQSFMTSGQSMKVQPSSY 567
++ A + +M PSS
Sbjct: 320 ANISLAQYLINARFRDVAAMWTDPSSM 346
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R ++GA I +
Sbjct: 13 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINI 51
>gi|24641097|ref|NP_727451.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|24641099|ref|NP_727452.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|24641101|ref|NP_727453.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|24641103|ref|NP_727454.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|24641105|ref|NP_727455.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
gi|22832052|gb|AAN09269.1| IGF-II mRNA-binding protein, isoform D [Drosophila melanogaster]
gi|22832053|gb|AAN09270.1| IGF-II mRNA-binding protein, isoform E [Drosophila melanogaster]
gi|22832054|gb|AAN09271.1| IGF-II mRNA-binding protein, isoform F [Drosophila melanogaster]
gi|22832055|gb|AAN09272.1| IGF-II mRNA-binding protein, isoform G [Drosophila melanogaster]
gi|22832056|gb|AAN09273.1| IGF-II mRNA-binding protein, isoform H [Drosophila melanogaster]
Length = 573
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 108/449 (24%), Positives = 196/449 (43%), Gaps = 76/449 (16%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G + AD RIL S +G +IG+ G+ ++++ ++++A++ V + + GS E+ I IY
Sbjct: 78 GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENV-GSLEKSITIY 136
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P ++ +A + E M+ Q+A+ S + E
Sbjct: 137 GNP--------ENCTNACKRILEVMQ-----QEAI-----------------STNKGE-- 164
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
I ++L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G
Sbjct: 165 -ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--NSFNLERIITVKGLI 221
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS 358
RA ++ST L Q+ D QA Q+ P +HP+ S P
Sbjct: 222 ENMSRAENQISTKLRQSYENDL------QAMAPQSLMFP-----GLHPMAMMSTPG---- 266
Query: 359 LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
+GM M Q M + PP ++ + I +A +G +IG G
Sbjct: 267 -NGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNA--VGAIIGTRGS 323
Query: 419 NVKQLQQETGASIHVEDAPTDSDE--------RVIRASAFEGLWNPRSQTIDAILQLQNK 470
+++ + + + AS+ + AP D+D+ +V EG W + + + +
Sbjct: 324 HIRSIMRFSNASLKI--APLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKM-----R 376
Query: 471 TSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP 527
F ++ +T LLV SS+VG I+G+GG + E++R T + I++ L P
Sbjct: 377 EEGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL--PEHALAPPSG 434
Query: 528 GSSECIVDIRGSSEHLISAHGTYQSFMTS 556
G E V I G + SA ++ M S
Sbjct: 435 GDEETPVHIIGLFYSVQSAQRRIRAMMLS 463
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP-TDSDERVIRASAFEGLW 454
A+F ++IL + +G +IG+ G ++ + Q++ A + V S E+ I
Sbjct: 83 ADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG----- 137
Query: 455 NPRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
NP + T IL++ + + + KG I ++L ++ +G I+G+ G+ I + + T
Sbjct: 138 NPENCTNACKRILEVMQQEAISTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 197
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSY 567
I V + D + + E I+ ++G E++ A QS+ Q+M Q +
Sbjct: 198 ITVSS----INDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMF 253
Query: 568 QNINP 572
++P
Sbjct: 254 PGLHP 258
>gi|326922311|ref|XP_003207393.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 313
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/332 (25%), Positives = 142/332 (42%), Gaps = 80/332 (24%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLV 246
DA+ K I EED+ M++ +T RL+V
Sbjct: 66 ---------------------DAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + +
Sbjct: 105 PASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLPN---STERAVTISGTPDAIIQCVK 160
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAP-MADMH----------PLGNSS--WP 353
++ ++ +AY Q ++ P P + +H PLG ++ +P
Sbjct: 161 QICVVML-------------EAYTIQGQYAIPHPDLTKLHQLAMQQTPFTPLGQTTPAFP 207
Query: 354 ARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVI 413
LH + G S +++ PP E++ + IG +I
Sbjct: 208 GEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL--------IGCII 251
Query: 414 GKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
G+ G + +++Q +GA I + +A S ER I
Sbjct: 252 GRQGTKINEIRQMSGAQIKIANATEGSSERQI 283
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 40/245 (16%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDITNSMSNSTATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAET---KKESMEPHCAAQDAL 213
A++ VA D +P S ER + I +P I + + E + + PH L
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLEAYTIQGQYAIPH----PDL 183
Query: 214 LKVHDRIIEEDLFG--------------------------GMASDDDNENSTITARLLVP 247
K+H +++ F G +S D T L +P
Sbjct: 184 TKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIP 243
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
N+++GC++G++G I +R +GA I++ A +++ + I+G P A Y
Sbjct: 244 NDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYL 298
Query: 308 VSTLL 312
++ L
Sbjct: 299 INARL 303
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 49
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 44/77 (57%), Gaps = 13/77 (16%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS- 539
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 237 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 289
Query: 540 -----SEHLISAHGTYQ 551
+++LI+A T +
Sbjct: 290 ANISLAQYLINARLTSE 306
>gi|308080276|ref|NP_001183239.1| hypothetical protein [Zea mays]
gi|238010240|gb|ACR36155.1| unknown [Zea mays]
gi|414884425|tpg|DAA60439.1| TPA: hypothetical protein ZEAMMB73_126154 [Zea mays]
Length = 647
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 118/454 (25%), Positives = 194/454 (42%), Gaps = 86/454 (18%)
Query: 122 NSQPADT---VYRILCPSRKIGGVIGKAGNIVKSLREETQA-KITVADTIPGSEE-RVII 176
++ PADT V+R+L PS + V LR T ++ V P S RV+
Sbjct: 20 DAGPADTGFAVFRLLLPSSFSDADTMRLYAAVNPLRRRTATLQVRVEPLDPASAGGRVVA 79
Query: 177 IYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE 236
PT + + + S++ + ++ P AQ+AL+ V D E L + + +
Sbjct: 80 AIVGPTVPVR---RVEASSSSAEPLALSP---AQEALVAVIDT--EGALCCAVEKEARGK 131
Query: 237 N--STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR--LPPCAMNTDEMV 292
IT LLV + + G+ V++R+ E GA++RV + PP +E+V
Sbjct: 132 ARPGCITCLLLVDADRLEASTGR--GVMERIALEAGADVRVAMWEEGAQPPRGQPLEEVV 189
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSS- 351
+I+G ++AL +S+ L D+ P+GNS+
Sbjct: 190 EITGDRTAVRKALVALSSFLQ----------------------------GDL-PIGNSTT 220
Query: 352 WPARNSSLHGMPST----PWMGGYGDQPSR---MGSGSINSCPPGQMGEVSA----EFSM 400
+ + S+ S+ P MG + S GS + CP G G+ + + S
Sbjct: 221 YVKKEGSILPWASSEVPGPNMGASCSEASTEFAQGSVAKTHCPEGNTGDAQSKTLQQVSF 280
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ- 459
++L GG+IGK G +K ++ ETGA I V ERVI A E +P S+
Sbjct: 281 RLLLPTYLAGGLIGKKGLIIKGIEVETGACIDVGAPVAGCKERVITICALE---SPDSEY 337
Query: 460 ---------TIDAILQLQNKT-SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
D +++++ T S F + R+LV ++ GC++G GG +I EM
Sbjct: 338 HIVQSALLLIFDRMMEMETNTHSTFEKASQFLVRVLVLKNQFGCLVGLGGSIIKEM---- 393
Query: 510 QADIRVVGARVKLQD----PHPGSS-ECIVDIRG 538
+ GAR+++ D P S+ E +V I G
Sbjct: 394 ---VNTTGARIQILDDTEIPACASTFELVVQITG 424
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/185 (31%), Positives = 89/185 (48%), Gaps = 34/185 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+L P+ GG+IGK G I+K + ET A I V + G +ERVI I ++
Sbjct: 280 FRLLLPTYLAGGLIGKKGLIIKGIEVETGACIDVGAPVAGCKERVI-------TICALES 332
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI------TAR 243
D + + Q ALL + DR++E + N +ST R
Sbjct: 333 PDSE------------YHIVQSALLLIFDRMMEME---------TNTHSTFEKASQFLVR 371
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+LV N GCL+G G +I+ + + TGA I++L +P CA + +VQI+G+ +
Sbjct: 372 VLVLKNQFGCLVGLGGSIIKEMVNTTGARIQILDDTEIPACASTFELVVQITGELMNIRN 431
Query: 304 ALYEV 308
AL V
Sbjct: 432 ALSLV 436
>gi|222613081|gb|EEE51213.1| hypothetical protein OsJ_32035 [Oryza sativa Japonica Group]
Length = 861
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/123 (45%), Positives = 79/123 (64%), Gaps = 6/123 (4%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNV-KQLQQETGASIHVEDAPTD-SDERVIRASAFEG 452
+ +F + IL S I G G F+V + +TGA V++ + S+ER+I S+ E
Sbjct: 502 ALKFCVGILFSYSPIRG----GIFSVCVNSEVQTGACGQVKEVGKNASEERLIVVSSQEI 557
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+P S TI+A++ L +K S +E +TTRL+VPS+KVGCILG+GG VI EMRRRT A+
Sbjct: 558 PDDPVSPTIEALILLHSKASTLAENHQLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAE 617
Query: 513 IRV 515
IRV
Sbjct: 618 IRV 620
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
EN +T RL+VP+N VGC+LG+ G VI +R TGA IRV P +E+VQ S
Sbjct: 581 ENHQLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQAS 640
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 515 VVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSS 566
+ GARVKL + HPGSSE IV+I+G + + +A Q F+ + + + P S
Sbjct: 803 ISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQSLLQGFIGASSNSRQAPQS 854
>gi|350424346|ref|XP_003493765.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Bombus impatiens]
Length = 626
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 181/407 (44%), Gaps = 72/407 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G+ + AD RIL S +G +IG+ G+ ++ + + T+A++ V D++ G+ E+ I IY
Sbjct: 180 GSGRQADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL-GAAEKAITIY 238
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P ++ K+ ME + +++ +G +
Sbjct: 239 GNP-----------ENCTNACKKIME---------------VTQQEAYGLSKGE------ 266
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
I+ R+L NN++G ++GK G I+++ +T I V + + N + ++ + G
Sbjct: 267 -ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINN--FNLERIITVKGSI 323
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA-PMADMHPLGNSSWPARNS 357
+ +A +S+ L Q+ D QA Q+ P PMA M G + +R
Sbjct: 324 DNMSKAESMISSKLRQSYEND------LQAMAPQSLMFPGLHPMAMMSTAG-MGYSSRGP 376
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
L+G P+ P + + P G E + + +G +IG G
Sbjct: 377 GLYGTGPAPY-------PYQTSLPTQQGIPIGDTQETAFLY-----IPNTSVGAIIGSKG 424
Query: 418 FNVKQLQQETGASIHV----EDAPTD--SDERVIRASAFEGLWNPRSQTIDAILQLQNKT 471
+++ + + +GAS+ + +D P + +D +V + E W + + + +
Sbjct: 425 SHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLIFEKM-----RE 479
Query: 472 SEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
F +E +T +LVPS++VG I+G+GG + E++R T + I++
Sbjct: 480 EGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKL 526
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 135/356 (37%), Gaps = 107/356 (30%)
Query: 115 SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSE 171
++++++G S+ + RIL + IG +IGK G +K + ++T KITV+ D +
Sbjct: 255 TQQEAYGLSK-GEISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFNL 313
Query: 172 ERVIIIYSSPTKIAKT---------QNKDDDSAAETKKESMEP--HCAAQDALLKVHDRI 220
ER+I + S ++K Q+ ++D A + M P H A + +
Sbjct: 314 ERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTAGMGYSS 373
Query: 221 IEEDLFG----------------GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQR 264
L+G G+ D E TA L +PN VG ++G +G I+
Sbjct: 374 RGPGLYGTGPAPYPYQTSLPTQQGIPIGDTQE----TAFLYIPNTSVGAIIGSKGSHIRN 429
Query: 265 LRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSS 324
+ +GA++++ P ++ P D V I G P
Sbjct: 430 IIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPE------------------------- 464
Query: 325 FPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSIN 384
S W A+ M ++GG D
Sbjct: 465 -------------------------SQWKAQYLIFEKMREEGFVGGTED----------- 488
Query: 385 SCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS 440
+++IL + ++G +IGKGG NV++LQ+ TG+ I + + + S
Sbjct: 489 -----------VRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTS 533
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
A+F ++IL + +G +IG+ G ++Q+ Q T A + V DS +A G N
Sbjct: 185 ADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRK--DSLGAAEKAITIYG--N 240
Query: 456 PRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
P + T I+++ + + KG I+ R+L ++ +G I+G+GG I ++ + T I
Sbjct: 241 PENCTNACKKIMEVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKI 300
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGS------SEHLISAHGTYQSFMTSGQSMKVQPSSY 567
V + D + + E I+ ++GS +E +IS+ QS+ Q+M Q +
Sbjct: 301 TV----SSINDINNFNLERIITVKGSIDNMSKAESMISSK-LRQSYENDLQAMAPQSLMF 355
Query: 568 QNINPQQSSCQTMSSHQSSYQN-----MNTQQSPYHRVNAQQSPYQNINPQQSSYPMHTH 622
++P MS+ Y + T +PY PYQ P Q P+
Sbjct: 356 PGLHP----MAMMSTAGMGYSSRGPGLYGTGPAPY--------PYQTSLPTQQGIPIGDT 403
Query: 623 Q 623
Q
Sbjct: 404 Q 404
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 40/182 (21%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT-----IPGSEERV 174
G++Q +Y P+ +G +IG G+ ++++ + A + +A + +R
Sbjct: 400 IGDTQETAFLY---IPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRK 456
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD 234
+ I SP K Q + +++ EE GG
Sbjct: 457 VTIVGSPESQWKAQ-------------------------YLIFEKMREEGFVGG------ 485
Query: 235 NENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
E+ +T +LVP+ VG ++GK G ++ L+ TG+ I++ P A + + VQI
Sbjct: 486 TEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSA-DEEATVQI 544
Query: 295 SG 296
G
Sbjct: 545 IG 546
>gi|449266969|gb|EMC77947.1| Insulin-like growth factor 2 mRNA-binding protein 2, partial
[Columba livia]
Length = 522
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 179/425 (42%), Gaps = 75/425 (17%)
Query: 113 NSSREQSF---GNSQPADTVY--RILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSRE+ G+SQP + R+L P++ +G +IGK G +K+L ++TQ+K+ +
Sbjct: 95 HSSRERGSSPGGSSQPKQLEFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKE 154
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ I I+++P C+ +A + D + +E
Sbjct: 155 NAGAAEKPITIHATPEG-----------------------CS--EACRMILDIMQKE--- 186
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N++VG L+GK G ++++ +TG I + P L
Sbjct: 187 ----ADETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDL--TIY 240
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G +A E+ L + D N + P +++
Sbjct: 241 NPERTITVKGSTEACSKAQVEIMKKLREAYEND---------VVAVNQQANLIPGLNLNA 291
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGD----QPSRMGSGSIN---SCPPG----QMGEVS 395
LG S + L +PSTP G P S ++ PPG +
Sbjct: 292 LGIFS-----TGLSMLPSTPGARGAAAATPYHPFASSSAYLSGLYGAPPGSAFPHQHPLP 346
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV--EDAPTDSDERVIRASAFEGL 453
+ + + +G +IGK G ++KQL + GASI + + P S+ VI E
Sbjct: 347 EQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASERMVIITGPPEAQ 406
Query: 454 WNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
+ + + + K F E+ + + VPS G ++G+GG +NE++ T
Sbjct: 407 FKAQGRIFGKL-----KEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTS 461
Query: 511 ADIRV 515
A++ V
Sbjct: 462 AEVIV 466
Score = 42.4 bits (98), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 385 SCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL--QQETGASIHVEDAPTDSDE 442
S P G EF +++L +G +IGK G +K L Q ++ IH ++ +++
Sbjct: 102 SSPGGSSQPKQLEFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEK 161
Query: 443 RVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVI 502
+ + EG +D +Q + E I ++L +S VG ++G+ G +
Sbjct: 162 PITIHATPEGCSEACRMILDI---MQKEADETKSAEEIPLKILAHNSLVGRLIGKEGRNL 218
Query: 503 NEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSE 541
++ + T I + LQD + E + ++GS+E
Sbjct: 219 KKIEQDTGTKITI----SPLQDLTIYNPERTITVKGSTE 253
>gi|218184819|gb|EEC67246.1| hypothetical protein OsI_34185 [Oryza sativa Indica Group]
Length = 470
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 66/93 (70%), Gaps = 1/93 (1%)
Query: 424 QQETGASIHVEDAPTD-SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITT 482
+ +TGA V++ + S+ER+I S+ E +P S TI+A++ L +K S +E +TT
Sbjct: 205 EVQTGACGQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKVSTLAENHQLTT 264
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
RL+VPS+KVGCILG+GG VI EMRRRT A+IRV
Sbjct: 265 RLVVPSNKVGCILGEGGKVITEMRRRTGAEIRV 297
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 36/60 (60%)
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
EN +T RL+VP+N VGC+LG+ G VI +R TGA IRV P +E+VQ S
Sbjct: 258 ENHQLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQAS 317
>gi|340722697|ref|XP_003399740.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 1 [Bombus terrestris]
Length = 627
Score = 85.9 bits (211), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 92/407 (22%), Positives = 181/407 (44%), Gaps = 72/407 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G+ + AD RIL S +G +IG+ G+ ++ + + T+A++ V D++ G+ E+ I IY
Sbjct: 180 GSGRQADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL-GAAEKAITIY 238
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P ++ K+ ME + +++ +G +
Sbjct: 239 GNP-----------ENCTNACKKIME---------------VTQQEAYGLSKGE------ 266
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
I+ R+L NN++G ++GK G I+++ +T I V + + N + ++ + G
Sbjct: 267 -ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINN--FNLERIITVKGSI 323
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA-PMADMHPLGNSSWPARNS 357
+ +A +S+ L Q+ D QA Q+ P PMA M G + +R
Sbjct: 324 DNMSKAESMISSKLRQSYEND------LQAMAPQSLMFPGLHPMAMMSTAG-MGYSSRGP 376
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
L+G P+ P + + P G E + + +G +IG G
Sbjct: 377 GLYGSGPAPY-------PYQTSLPTQQGIPIGDTQETAFLY-----IPNTSVGAIIGSKG 424
Query: 418 FNVKQLQQETGASIHV----EDAPTD--SDERVIRASAFEGLWNPRSQTIDAILQLQNKT 471
+++ + + +GAS+ + +D P + +D +V + E W + + + +
Sbjct: 425 SHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLIFEKM-----RE 479
Query: 472 SEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
F +E +T +LVPS++VG I+G+GG + E++R T + I++
Sbjct: 480 EGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKL 526
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 35/224 (15%)
Query: 115 SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSE 171
++++++G S+ + RIL + IG +IGK G +K + ++T KITV+ D +
Sbjct: 255 TQQEAYGLSK-GEISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFNL 313
Query: 172 ERVIIIYSSPTKIAKT---------QNKDDDSAAETKKESMEP--HCAAQDALLKVHDRI 220
ER+I + S ++K Q+ ++D A + M P H A + +
Sbjct: 314 ERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTAGMGYSS 373
Query: 221 IEEDLFG----------------GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQR 264
L+G G+ D E TA L +PN VG ++G +G I+
Sbjct: 374 RGPGLYGSGPAPYPYQTSLPTQQGIPIGDTQE----TAFLYIPNTSVGAIIGSKGSHIRN 429
Query: 265 LRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ +GA++++ P ++ P D V I G P +A Y +
Sbjct: 430 IIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQYLI 473
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 17/185 (9%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
A+F ++IL + +G +IG+ G ++Q+ Q T A + V DS +A G N
Sbjct: 185 ADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRK--DSLGAAEKAITIYG--N 240
Query: 456 PRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
P + T I+++ + + KG I+ R+L ++ +G I+G+GG I ++ + T I
Sbjct: 241 PENCTNACKKIMEVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKI 300
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGS------SEHLISAHGTYQSFMTSGQSMKVQPSSY 567
V + D + + E I+ ++GS +E +IS+ QS+ Q+M Q +
Sbjct: 301 TV----SSINDINNFNLERIITVKGSIDNMSKAESMISSK-LRQSYENDLQAMAPQSLMF 355
Query: 568 QNINP 572
++P
Sbjct: 356 PGLHP 360
Score = 39.7 bits (91), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 40/182 (21%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-----DTIPGSEERV 174
G++Q +Y P+ +G +IG G+ ++++ + A + +A + +R
Sbjct: 400 IGDTQETAFLY---IPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRK 456
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD 234
+ I SP K Q + +++ EE GG
Sbjct: 457 VTIVGSPESQWKAQ-------------------------YLIFEKMREEGFVGG------ 485
Query: 235 NENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
E+ +T +LVP+ VG ++GK G ++ L+ TG+ I++ P A + + VQI
Sbjct: 486 TEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSA-DEEATVQI 544
Query: 295 SG 296
G
Sbjct: 545 IG 546
>gi|18071423|gb|AAL58282.1|AC068923_24 putative membrane-associated protein [Oryza sativa Japonica Group]
Length = 952
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 1/91 (1%)
Query: 426 ETGASIHVEDAPTD-SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRL 484
+TGA V++ + S+ER+I S+ E +P S TI+A++ L +K S +E +TTRL
Sbjct: 548 QTGACGQVKEVGKNASEERLIVVSSQEIPDDPVSPTIEALILLHSKASTLAENHQLTTRL 607
Query: 485 LVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+VPS+KVGCILG+GG VI EMRRRT A+IRV
Sbjct: 608 VVPSNKVGCILGEGGKVITEMRRRTGAEIRV 638
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%)
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
EN +T RL+VP+N VGC+LG+ G VI +R TGA IRV P +E+VQ
Sbjct: 599 ENHQLTTRLVVPSNKVGCILGEGGKVITEMRRRTGAEIRVYSKADKPKYLSFDEELVQ 656
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 515 VVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSS 566
+ GARVKL + HPGSSE IV+I+G + + +A Q F+ + + + P S
Sbjct: 894 ISGARVKLHEAHPGSSESIVEIQGIPDQVKAAQSLLQGFIGASSNSRQAPQS 945
>gi|147767494|emb|CAN60206.1| hypothetical protein VITISV_036062 [Vitis vinifera]
Length = 242
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 65/99 (65%), Gaps = 4/99 (4%)
Query: 210 QDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSET 269
+DAL +VHD+++ E + S+D E S +T +LLV ++ +GC++GK G +IQ + SE+
Sbjct: 56 EDALFRVHDKVVSEK----VHSEDFEEASQVTVQLLVTSDQIGCVIGKGGQIIQNIYSES 111
Query: 270 GANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
GA I +L D L CA++ DE+VQISG+ + R ++
Sbjct: 112 GAQIYILKNDHLLSCALSFDELVQISGERPLLGRLFIKL 150
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/76 (25%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 448 SAFEGLWNPRSQTIDAILQLQNK-------TSEFSEKGTITTRLLVPSSKVGCILGQGGH 500
+ + L+ + + DA+ ++ +K + +F E +T +LLV S ++GC++G+GG
Sbjct: 43 TVYIDLYALKERLEDALFRVHDKVVSEKVHSEDFEEASQVTVQLLVTSDQIGCVIGKGGQ 102
Query: 501 VINEMRRRTQADIRVV 516
+I + + A I ++
Sbjct: 103 IIQNIYSESGAQIYIL 118
>gi|189237154|ref|XP_973939.2| PREDICTED: similar to igf2 mRNA binding protein, putative
[Tribolium castaneum]
Length = 1116
Score = 85.5 bits (210), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 107/439 (24%), Positives = 183/439 (41%), Gaps = 93/439 (21%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G S+ D RIL S +G +IG+ G+ ++ + ++T+A++ V D + GS E+ I IY
Sbjct: 123 GQSRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNV-GSLEKAITIY 181
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P E+ C RI+E M + +N N
Sbjct: 182 GNP-------------------ENCTNAC----------KRILEV-----MQQEANNTNK 207
Query: 239 --------TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE 290
I ++L NN++G ++GK G+ I+R+ ET I V + + + N +
Sbjct: 208 GYAKKYYYEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDIN--SFNLER 265
Query: 291 MVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNS 350
++ + G + RA ++S L Q+ D QA Q P +HP+
Sbjct: 266 IITVKGAIDNMSRAEAQISAKLRQSYENDL------QAMAPQTMMFP-----GLHPMA-- 312
Query: 351 SWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPG---QMGEVSAEFSMKILCSAG 407
M +T +G YG + G P Q G S E + +
Sbjct: 313 -----------MMATAGIG-YGSRGLYTGQAPYPGMYPAGAAQGGGDSQE-TTYLYIPNN 359
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHV----EDAP--TDSDERVIRASAFEGLWNPRSQTI 461
+G +IG G +++ + + +GAS+ + E P T ++ RV + E W +
Sbjct: 360 AVGAIIGTKGSHIRNIIRFSGASVKIAPIDETKPQETQNERRVTIVGSPEAQWKAQYLIF 419
Query: 462 DAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVK 521
+ + + S+ +T ++VPSS+VG I+G+GG + E++ RV G+ +K
Sbjct: 420 EKMRE--EGFVAGSDDVRLTVEIMVPSSQVGRIIGKGGQNVRELQ-------RVTGSVIK 470
Query: 522 L--QDPHPGSSECIVDIRG 538
L Q P E V I G
Sbjct: 471 LPEQGASPQEDETTVHIIG 489
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 101/220 (45%), Gaps = 18/220 (8%)
Query: 388 PGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGA--SIHVEDAPTDSDERVI 445
PGQ + +F ++IL + +G +IG+ G ++Q+ Q+T A +H +D ++ +
Sbjct: 122 PGQSRQ--TDFPLRILVQSDMVGAIIGRQGSTIRQITQQTRARVDVHRKDNVGSLEKAIT 179
Query: 446 RASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG---TITTRLLVPSSKVGCILGQGGHVI 502
E N + ++ + Q N T++ K I ++L ++ +G I+G+GG+ I
Sbjct: 180 IYGNPENCTNACKRILEVMQQEANNTNKGYAKKYYYEICLKILAHNNLIGRIIGKGGNTI 239
Query: 503 NEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSG 557
+ + T I V + D + + E I+ ++G+ +++ A QS+
Sbjct: 240 KRIMQETDTKITV----SSINDINSFNLERIITVKGAIDNMSRAEAQISAKLRQSYENDL 295
Query: 558 QSMKVQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPY 597
Q+M Q + ++P + S + + T Q+PY
Sbjct: 296 QAMAPQTMMFPGLHPMAMMATAGIGYGS--RGLYTGQAPY 333
>gi|7671433|emb|CAB89374.1| putative protein [Arabidopsis thaliana]
Length = 567
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 116/440 (26%), Positives = 193/440 (43%), Gaps = 86/440 (19%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT-IPGSEERVIIIYS-----SPTK 183
+RILC + G VIGK G +VK L + T++ I V T + S R+I I+ S K
Sbjct: 32 FRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIKIFGHVGSVSRVK 91
Query: 184 IAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR 243
+ N + + +++ +E AQ AL+ R+ E FG D +ST++
Sbjct: 92 LGVIVNNVSNREKKEQEQEVEVS-RAQYALI----RVFEALNFG------DCTSSTVSCN 140
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGAN--IRVL----PADRLPPCAMNTDEMVQISG- 296
LL+ + V ++GK G+++QR+ ETG N I+ L + R+ D +I G
Sbjct: 141 LLMEGSHVVTVIGKNGELMQRILEETGCNSLIKALLFGSSSCRIIHGTYARD---KIEGN 197
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN 356
+ + +AL +S+ L P P S+ + H+ P A P+ S R
Sbjct: 198 RLSAVMKALVSISSRLQACP----PIST-------ASLHAEAVPDALRRPMEYRSQQYRE 246
Query: 357 SSLHG-----------------------MPSTPWMGGYGDQPSRMGSGSINSCPPGQMGE 393
HG P ++ + S S N PP + +
Sbjct: 247 VDPHGSLHRHVEISQEDALVRPFFRTITQPRIDYLPHPSYDHRLITSASKN--PPVTIKQ 304
Query: 394 -VSA------EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
+ A + +KILCS VI + + T ASI V D D DER++
Sbjct: 305 PLQASKDDIRQVDLKILCSNESASVVI--------KTRSVTDASISVGDRHPDCDERLVT 356
Query: 447 ASAFEGLWNPRSQTIDAILQL-----QNKTSEFSEKG---TITTRLLVPSSKVGCILGQG 498
+AFE + S++ A++ + +N T++ + G +IT RL+V S+++ C+LG+
Sbjct: 357 ITAFEKTKDITSESQRALVLVFSNMYENATAKVLDSGLTSSITARLVVRSNQINCLLGEE 416
Query: 499 GHVINEMRRRTQADIRVVGA 518
G + +++RT A I V+
Sbjct: 417 GRIKTTIQQRTGAFITVLNV 436
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 104/214 (48%), Gaps = 41/214 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
+ILC + ++ ++V R T A I+V D P +ER++ I T KT++
Sbjct: 319 KILCSN--------ESASVVIKTRSVTDASISVGDRHPDCDERLVTI----TAFEKTKDI 366
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+S Q AL+ V + E + D S+ITARL+V +N
Sbjct: 367 TSES---------------QRALVLVFSNMYENATAKVL---DSGLTSSITARLVVRSNQ 408
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK-PNVAKRALYEVS 309
+ CLLG+ G + ++ TGA I VL ++ P C +++VQISG+ PNV + A+ +V+
Sbjct: 409 INCLLGEEGRIKTTIQQRTGAFITVLNVEQNPKCVSENNQVVQISGEFPNV-REAINQVT 467
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQ---NFHSPPAP 340
++L R+D SF + G Q N+ P P
Sbjct: 468 SML----REDLINQSFQR--GSQYAVNYSEDPFP 495
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT-DSDERVIR 446
+ +ILC+ + G VIGK G VK+L + T +SI VE P DS R+I+
Sbjct: 31 TFRILCNVSQAGHVIGKHGGMVKKLHKSTESSIWVEKTPLDDSPYRIIK 79
>gi|326917277|ref|XP_003204927.1| PREDICTED: poly(rC)-binding protein 3-like [Meleagris gallopavo]
Length = 448
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 145/333 (43%), Gaps = 60/333 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ GS I+ + PT
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSCPERIVTITGPT-------- 68
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M + +T RL+VP
Sbjct: 69 --------------------DAIFKAFSMIALKFEEDINASMTNSSVTSKPPVTLRLVVP 108
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 109 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 164
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
+ ++ ++P K +P P+S P + GGQ A H + PA ++
Sbjct: 165 ICVVMLESPPKGATIPYRPKPASAPIIFAGGQVRADTILASAGNHTVLAQPQPAPAFTIQ 224
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF----------SMKILCSAGKIG 410
G + P +++ ++ P +G+ + F S ++ IG
Sbjct: 225 GQYAIPH-----PDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATSPTSSHELTIPNDLIG 279
Query: 411 GVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+IG+ G + +++Q +GA I + +A S ER
Sbjct: 280 CIIGRQGSKINEIRQMSGAQIKIANATEGSAER 312
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + ER++ +
Sbjct: 11 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT 68
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + I+A + S + K +T RL+VP+S+ G ++G+GG I
Sbjct: 69 DAIFKAFSMIALKFEEDINASM----TNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIK 124
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 125 EIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 159
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ +K N+S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 72 FKAFSMIALKFEEDINASMTNSSVTSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 130
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 131 GAQVQVAGDMLPNSTERAVTISGTPDAI 158
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 15/103 (14%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
L +P+ +GCI+G+ G INE+R+ + GA++K+ + GS+E V I GS
Sbjct: 270 ELTIPNDLIGCIIGRQGSKINEIRQMS-------GAQIKIANATEGSAERQVTITGSPAN 322
Query: 540 ---SEHLISAHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQT 579
+++LI+A + + S Q+ V N+N QS+ T
Sbjct: 323 ISLAQYLINA--SLEMAKVSTQTASVTTPVDLNMNLSQSATPT 363
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 14 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 52
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ 188
+ + P+ IG +IG+ G+ + +R+ + A+I +A+ GS ER + I SP I+ Q
Sbjct: 269 HELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITGSPANISLAQ 327
>gi|242040159|ref|XP_002467474.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
gi|241921328|gb|EER94472.1| hypothetical protein SORBIDRAFT_01g028800 [Sorghum bicolor]
Length = 452
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 94/192 (48%), Gaps = 21/192 (10%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D+V+R++ P K+G +IG+ G ++K L EET+A++ + + G+ ER++++
Sbjct: 47 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLV------- 99
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
S E + P A DAL++V R+I + ARL
Sbjct: 100 ---------SGKEDPGLELPP---AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARL 147
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD-RLPPCAMNTDE-MVQISGKPNVAK 302
LVP L+GK+G I+ ++ TGA IRV+ D R P + DE +++I G
Sbjct: 148 LVPGAQAINLIGKQGATIKAIQESTGATIRVISVDERERPFYVTDDERIIEIQGDTEKVL 207
Query: 303 RALYEVSTLLHQ 314
+AL VS L +
Sbjct: 208 KALQAVSNHLRK 219
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 81/160 (50%), Gaps = 15/160 (9%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE--GLWNPR 457
+++ K+G +IG+ G +K+L +ET A + + + P + ER++ S E GL P
Sbjct: 52 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPGLELPP 111
Query: 458 SQTIDAILQLQNK-----------TSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMR 506
+ +DA++++ + T + G RLLVP ++ ++G+ G I ++
Sbjct: 112 A--MDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQ 169
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
T A IRV+ + + + E I++I+G +E ++ A
Sbjct: 170 ESTGATIRVISVDERERPFYVTDDERIIEIQGDTEKVLKA 209
>gi|118086587|ref|XP_419049.2| PREDICTED: poly(rC)-binding protein 3 [Gallus gallus]
Length = 448
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/333 (25%), Positives = 145/333 (43%), Gaps = 60/333 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ GS I+ + PT
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSCPERIVTITGPT-------- 68
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M + +T RL+VP
Sbjct: 69 --------------------DAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVP 108
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 109 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 164
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
+ ++ ++P K +P P+S P + GGQ A H + PA ++
Sbjct: 165 ICVVMLESPPKGATIPYRPKPASAPIIFAGGQVRADTILASAGNHTVLAQPQPAPAFTIQ 224
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF----------SMKILCSAGKIG 410
G + P +++ ++ P +G+ + F S ++ IG
Sbjct: 225 GQYAIPH-----PDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATSPTSSHELTIPNDLIG 279
Query: 411 GVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+IG+ G + +++Q +GA I + +A S ER
Sbjct: 280 CIIGRQGSKINEIRQMSGAQIKIANATEGSAER 312
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + ER++ +
Sbjct: 11 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT 68
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + I+A + S + K +T RL+VP+S+ G ++G+GG I
Sbjct: 69 DAIFKAFSMIALKFEEDINASM----TNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIK 124
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 125 EIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 159
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ +K N+S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 130
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 131 GAQVQVAGDMLPNSTERAVTISGTPDAI 158
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 15/103 (14%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
L +P+ +GCI+G+ G INE+R+ + GA++K+ + GS+E V I GS
Sbjct: 270 ELTIPNDLIGCIIGRQGSKINEIRQMS-------GAQIKIANATEGSAERQVTITGSPAN 322
Query: 540 ---SEHLISAHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQT 579
+++LI+A + + S Q+ V N+N QS+ T
Sbjct: 323 ISLAQYLINA--SLEMAKVSTQTASVTTPVDLNMNLSQSATPT 363
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 14 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 52
Score = 39.3 bits (90), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ 188
+ + P+ IG +IG+ G+ + +R+ + A+I +A+ GS ER + I SP I+ Q
Sbjct: 269 HELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITGSPANISLAQ 327
>gi|225543383|ref|NP_076159.3| insulin-like growth factor 2 mRNA-binding protein 3 [Mus musculus]
gi|81916748|sp|Q9CPN8.1|IF2B3_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3;
Short=mIMP-3; AltName: Full=IGF-II mRNA-binding protein
3; AltName: Full=VICKZ family member 3
gi|11933384|dbj|BAB19755.1| igf2 mRNA-binding protein 3 [Mus musculus]
gi|12847973|dbj|BAB27779.1| unnamed protein product [Mus musculus]
gi|28175449|gb|AAH45138.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|29145081|gb|AAH49082.1| Insulin-like growth factor 2 mRNA binding protein 3 [Mus musculus]
gi|148666183|gb|EDK98599.1| insulin-like growth factor 2 mRNA binding protein 3, isoform CRA_b
[Mus musculus]
Length = 579
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 175/411 (42%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQASPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGSVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P P++ PS + PP E S ++ + A +
Sbjct: 375 -LFP---------PTSGMPPPTSGPPSTL-------TPPYPQFEQSETETVHLFIPALSV 417
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 472
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 473 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVV 523
>gi|26353480|dbj|BAC40370.1| unnamed protein product [Mus musculus]
Length = 579
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 175/411 (42%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQASPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGSVETCAKAEEEIMKKIRE---------SYENDIASMNLQANLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P P++ PS + PP E S ++ + A +
Sbjct: 375 -LFP---------PTSGMPPPTSGPPSTL-------TPPYPQFEQSETETVHLFIPALSV 417
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 472
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 473 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVV 523
>gi|291394537|ref|XP_002713869.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Oryctolagus cuniculus]
Length = 517
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 96/411 (23%), Positives = 171/411 (41%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGNS---QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G++ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 117 SSRQGSPGSASKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 176
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 177 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDT------KFTEE------ 214
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 215 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 262
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 263 RTITVKGSVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALGL 313
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
P + Y PP + E ++ + A +
Sbjct: 314 FPPTPGMPPPTPGPPSAMAPPY---------------PPLEQSETE---TVHLFIPALSV 355
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 356 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 410
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 411 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 461
>gi|74151175|dbj|BAE27710.1| unnamed protein product [Mus musculus]
Length = 579
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 175/411 (42%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQASPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGSVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P P++ PS + PP E S ++ + A +
Sbjct: 375 -LFP---------PTSGMPPPTSGPPSTL-------TPPYPQFEQSETETVHLFIPALSV 417
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 472
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 473 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVV 523
>gi|351705765|gb|EHB08684.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Heterocephalus
glaber]
Length = 546
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 104/418 (24%), Positives = 178/418 (42%), Gaps = 82/418 (19%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 96 SSRQGSPGSVSRQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 155
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 156 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 193
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 194 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 241
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 242 RTITVKGSVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 291
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ + A +
Sbjct: 292 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPAPSV 334
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 335 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 389
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHV-------INEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 390 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTASTSAKPVNELQNLSSAEVVV 447
>gi|115495373|ref|NP_001069752.1| poly(rC)-binding protein 3 [Bos taurus]
gi|301767382|ref|XP_002919105.1| PREDICTED: poly(rC)-binding protein 3-like [Ailuropoda melanoleuca]
gi|359323604|ref|XP_848733.3| PREDICTED: poly(rC)-binding protein 3 [Canis lupus familiaris]
gi|109659150|gb|AAI18167.1| Poly(rC) binding protein 3 [Bos taurus]
gi|296490840|tpg|DAA32953.1| TPA: poly(rC) binding protein 3 [Bos taurus]
Length = 361
Score = 84.7 bits (208), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 151/366 (41%), Gaps = 102/366 (27%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGG-----------------------------Q 332
+ ++ ++P K +P P+S P + G Q
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQ 221
Query: 333 NFHSPPAP-MADMH----------PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMG 379
++ P P + +H PLG N ++P LH + G
Sbjct: 222 GQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ-------- 273
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
S +++ PP E++ + IG +IG+ G + +++Q +GA I + +A
Sbjct: 274 SSGLDASPPASTHELTIPNDL--------IGCIIGRQGTKINEIRQMSGAQIKIANATEG 325
Query: 440 SDERVI 445
S ER I
Sbjct: 326 SSERQI 331
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 110/289 (38%), Gaps = 80/289 (27%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVAD-----------TIPGSEERVI-------------------IIY-----SSPT 182
A++ VA TI G+ + +I I Y S+P
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 187
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDA-------------LLKVHDRIIEEDLF--- 226
A Q + D AA T S+ A L K+H +++ F
Sbjct: 188 IFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPL 247
Query: 227 -----------------------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
G +S D T L +PN+++GC++G++G I
Sbjct: 248 GQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 307
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+R +GA I++ A +++ + I+G P A Y ++ L
Sbjct: 308 EIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 351
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 63
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 64 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 100
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 337
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 338 ANISLAQYLINARLTS 353
>gi|449509689|ref|XP_002192903.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Taeniopygia guttata]
Length = 531
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/437 (22%), Positives = 179/437 (40%), Gaps = 81/437 (18%)
Query: 107 KKGNWSNSSREQSFGNS-QPA--DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
++G S+ R S G S QP D R+L P++ +G +IGK G +K+L ++TQ+K+ +
Sbjct: 93 RRGGHSSRERGSSPGGSWQPKQLDFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDI 152
Query: 164 -ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIE 222
G+ E+ I I+++P C+ +A + D + +
Sbjct: 153 HRKENAGAAEKPITIHATPEG-----------------------CS--EACRMILDIMQK 187
Query: 223 EDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
E +D+ + ++L N++VG L+GK G ++++ +TG I + P L
Sbjct: 188 E-------ADETKSAEEVPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDL- 239
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMA 342
N + + + G A E+ L + D N + P
Sbjct: 240 -TIYNPERTITVKGSTEACSNAEVEIMKKLREAYEND---------VVAVNQQANLIPGL 289
Query: 343 DMHPLGNSSWPARNSSLHGMPSTPWMGG---------YGDQPSRMGSG------SINSCP 387
++ LG S + L +PSTP G + Q R +G S+ P
Sbjct: 290 NLSALGIFS-----TGLSMLPSTPGARGAAAATPYHPFAQQSGRRRTGSSAYLSSLYGAP 344
Query: 388 PG----QMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV--EDAPTDSD 441
P + + + + +G +IGK G ++KQL + GASI + + P S+
Sbjct: 345 PAGAFPHQHPLPEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDASE 404
Query: 442 ERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQG 498
VI E + + + + K F E+ + + VPS G ++G+G
Sbjct: 405 RMVIITGPPEAQFKAQGRIFGKL-----KEENFFNPKEEVKLEAHIKVPSFAAGRVIGKG 459
Query: 499 GHVINEMRRRTQADIRV 515
G +NE++ T A++ V
Sbjct: 460 GKTVNELQNLTSAEVIV 476
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 71/159 (44%), Gaps = 9/159 (5%)
Query: 385 SCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL--QQETGASIHVEDAPTDSDE 442
S P G +F +++L +G +IGK G +K L Q ++ IH ++ +++
Sbjct: 104 SSPGGSWQPKQLDFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEK 163
Query: 443 RVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVI 502
+ + EG +D +Q + E + ++L +S VG ++G+ G +
Sbjct: 164 PITIHATPEGCSEACRMILDI---MQKEADETKSAEEVPLKILAHNSLVGRLIGKEGRNL 220
Query: 503 NEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSE 541
++ + T I + LQD + E + ++GS+E
Sbjct: 221 KKIEQDTGTKITI----SPLQDLTIYNPERTITVKGSTE 255
>gi|340722699|ref|XP_003399741.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
isoform 2 [Bombus terrestris]
Length = 577
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 94/408 (23%), Positives = 181/408 (44%), Gaps = 74/408 (18%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G+ + AD RIL S +G +IG+ G+ ++ + + T+A++ V D++ G+ E+ I IY
Sbjct: 130 GSGRQADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRKDSL-GAAEKAITIY 188
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P +C +A K+ + + +++ +G +
Sbjct: 189 GNP-----------------------ENCT--NACKKIME-VTQQEAYGLSKGE------ 216
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
I+ R+L NN++G ++GK G I+++ +T I V + + N + ++ + G
Sbjct: 217 -ISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINN--FNLERIITVKGSI 273
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA-PMADMHPLGNSSWPARNS 357
+ +A +S+ L Q+ D QA Q+ P PMA M G + +R
Sbjct: 274 DNMSKAESMISSKLRQSYEND------LQAMAPQSLMFPGLHPMAMMSTAG-MGYSSRGP 326
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
L+G P+ P + + P G E + + +G +IG G
Sbjct: 327 GLYGSGPAPY-------PYQTSLPTQQGIPIGDTQETAFLY-----IPNTSVGAIIGSKG 374
Query: 418 FNVKQLQQETGASIHV----EDAPTD--SDERVIRASAFEGLWNPRSQTIDAILQLQNKT 471
+++ + + +GAS+ + +D P + +D +V + E W + L +
Sbjct: 375 SHIRNIIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPESQWKAQ------YLIFEKMR 428
Query: 472 SEFSEKGT----ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E GT +T +LVPS++VG I+G+GG + E++R T + I++
Sbjct: 429 EEGFVGGTEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKL 476
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 77/356 (21%), Positives = 135/356 (37%), Gaps = 107/356 (30%)
Query: 115 SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSE 171
++++++G S+ + RIL + IG +IGK G +K + ++T KITV+ D +
Sbjct: 205 TQQEAYGLSK-GEISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKITVSSINDINNFNL 263
Query: 172 ERVIIIYSSPTKIAKT---------QNKDDDSAAETKKESMEP--HCAAQDALLKVHDRI 220
ER+I + S ++K Q+ ++D A + M P H A + +
Sbjct: 264 ERIITVKGSIDNMSKAESMISSKLRQSYENDLQAMAPQSLMFPGLHPMAMMSTAGMGYSS 323
Query: 221 IEEDLFG----------------GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQR 264
L+G G+ D E TA L +PN VG ++G +G I+
Sbjct: 324 RGPGLYGSGPAPYPYQTSLPTQQGIPIGDTQE----TAFLYIPNTSVGAIIGSKGSHIRN 379
Query: 265 LRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSS 324
+ +GA++++ P ++ P D V I G P
Sbjct: 380 IIRFSGASVKIAPIEQDKPVEQQNDRKVTIVGSPE------------------------- 414
Query: 325 FPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSIN 384
S W A+ M ++GG D
Sbjct: 415 -------------------------SQWKAQYLIFEKMREEGFVGGTED----------- 438
Query: 385 SCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS 440
+++IL + ++G +IGKGG NV++LQ+ TG+ I + + + S
Sbjct: 439 -----------VRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTS 483
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 91/185 (49%), Gaps = 17/185 (9%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
A+F ++IL + +G +IG+ G ++Q+ Q T A + V DS +A G N
Sbjct: 135 ADFPLRILVQSEMVGAIIGRQGSTIRQITQMTRARVDVHRK--DSLGAAEKAITIYG--N 190
Query: 456 PRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
P + T I+++ + + KG I+ R+L ++ +G I+G+GG I ++ + T I
Sbjct: 191 PENCTNACKKIMEVTQQEAYGLSKGEISLRILAHNNLIGRIIGKGGTTIKKIMQDTDTKI 250
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGS------SEHLISAHGTYQSFMTSGQSMKVQPSSY 567
V + D + + E I+ ++GS +E +IS+ QS+ Q+M Q +
Sbjct: 251 TV----SSINDINNFNLERIITVKGSIDNMSKAESMISSK-LRQSYENDLQAMAPQSLMF 305
Query: 568 QNINP 572
++P
Sbjct: 306 PGLHP 310
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 40/182 (21%), Positives = 75/182 (41%), Gaps = 40/182 (21%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-----DTIPGSEERV 174
G++Q +Y P+ +G +IG G+ ++++ + A + +A + +R
Sbjct: 350 IGDTQETAFLY---IPNTSVGAIIGSKGSHIRNIIRFSGASVKIAPIEQDKPVEQQNDRK 406
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD 234
+ I SP K Q + +++ EE GG
Sbjct: 407 VTIVGSPESQWKAQ-------------------------YLIFEKMREEGFVGG------ 435
Query: 235 NENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
E+ +T +LVP+ VG ++GK G ++ L+ TG+ I++ P A + + VQI
Sbjct: 436 TEDVRLTIEILVPSTQVGRIIGKGGQNVRELQRVTGSIIKLSEQQSTSPSA-DEEATVQI 494
Query: 295 SG 296
G
Sbjct: 495 IG 496
>gi|449493846|ref|XP_002188887.2| PREDICTED: poly(rC)-binding protein 3-like [Taeniopygia guttata]
Length = 352
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 86/335 (25%), Positives = 148/335 (44%), Gaps = 62/335 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVAD-TIPGSEERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +REE+ A+I +++ T P ER++ I + PT
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGTCP---ERIVTI-TGPT------ 68
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLL 245
DA+ K I EED+ M + +T RL+
Sbjct: 69 ----------------------DAIFKAFSMIALKFEEDINASMTNSSVTSKPPVTLRLV 106
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP + G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + +
Sbjct: 107 VPASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCV 162
Query: 306 YEVSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHSPPAPMADMHPLGNSSWPARNSS 358
++ ++ ++P K +P P+S P + GGQ A H + PA +
Sbjct: 163 KQICVVMLESPPKGATIPYRPKPASAPIIFAGGQVRADTILASAGNHTVLAQPQPAPAFT 222
Query: 359 LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF----------SMKILCSAGK 408
+ G + P +++ ++ P +G+ + F S ++
Sbjct: 223 IQGQYAIPH-----PDLTKLHQLAMQHPPFTPLGQTTPGFPGLDATTPTSSHELTIPNDL 277
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
IG +IG+ G + +++Q +GA I + +A S ER
Sbjct: 278 IGCIIGRQGSKINEIRQMSGAQIKIANATEGSAER 312
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + ER++ +
Sbjct: 11 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--TCPERIVTITGPT 68
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + I+A + S + K +T RL+VP+S+ G ++G+GG I
Sbjct: 69 DAIFKAFSMIALKFEEDINASM----TNSSVTSKPPVTLRLVVPASQCGSLIGKGGSKIK 124
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 125 EIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 159
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ +K N+S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 72 FKAFSMIALKFEEDINASMTNSSVTSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 130
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 131 GAQVQVAGDMLPNSTERAVTISGTPDAI 158
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 14 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 52
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 39/74 (52%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+ + P+ IG +IG+ G+ + +R+ + A+I +A+ GS ER + I SP I+ Q
Sbjct: 269 HELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITGSPANISLAQY 328
Query: 190 KDDDSAAETKKESM 203
+ S K E +
Sbjct: 329 LINASIYFLKSECL 342
Score = 39.7 bits (91), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 41/70 (58%), Gaps = 13/70 (18%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
L +P+ +GCI+G+ G INE+R+ + GA++K+ + GS+E V I GS
Sbjct: 270 ELTIPNDLIGCIIGRQGSKINEIRQMS-------GAQIKIANATEGSAERQVTITGSPAN 322
Query: 540 ---SEHLISA 546
+++LI+A
Sbjct: 323 ISLAQYLINA 332
>gi|348519757|ref|XP_003447396.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Oreochromis niloticus]
Length = 611
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 174/412 (42%), Gaps = 61/412 (14%)
Query: 120 FGNSQPA--DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVII 176
+G+ +P D R+L P++ +G +IGK GN +K + ++TQ+K+ + G+ E+ I
Sbjct: 189 YGSPRPRQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPIT 248
Query: 177 IYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE 236
I+S+P E AA +L + + +++
Sbjct: 249 IHSTP----------------------EGCSAACRMILDIMQK----------EANETKT 276
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
I ++L N++VG L+GK G ++++ +TG I + L N + + + G
Sbjct: 277 TEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITISSLQDL--TIYNPERTITVKG 334
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG--NSSWPA 354
+ +A E++ L + D N + P +++ LG +S P
Sbjct: 335 SIDACCKAEVEITKKLREAYEND---------IAAINQQANLIPGLNLNALGIFSSGLPV 385
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSIN--------SCPPGQMGEVSAEFSMKIL-CS 405
+ + P + G P S ++ S P Q + + E + L
Sbjct: 386 LPPAAGPRSAVPAVAPAGYNPFLSHSSHLSGLYGVPPASAIPHQHSQQAPEQEVVYLFIP 445
Query: 406 AGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAIL 465
+G +IGK G ++KQL GASI + AP +S + R G + + I
Sbjct: 446 TQAVGALIGKKGQHIKQLAHFAGASIKI--APAESPDVTERMVIITGTPEAQFKAQGRIF 503
Query: 466 QLQNKTSEFS--EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ + FS E+ + T + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 504 GKLKEENFFSAKEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIV 555
>gi|338720838|ref|XP_001488421.3| PREDICTED: poly(rC)-binding protein 3 [Equus caballus]
Length = 393
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 151/366 (41%), Gaps = 102/366 (27%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGG-----------------------------Q 332
+ ++ ++P K +P P+S P + G Q
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQ 253
Query: 333 NFHSPPAP-MADMH----------PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMG 379
++ P P + +H PLG N ++P LH + G
Sbjct: 254 GQYAIPHPELTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ-------- 305
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
S +++ PP E++ + IG +IG+ G + +++Q +GA I + +A
Sbjct: 306 SSGLDASPPASTHELTIPNDL--------IGCIIGRQGTKINEIRQMSGAQIKIANATEG 357
Query: 440 SDERVI 445
S ER I
Sbjct: 358 SSERQI 363
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 110/289 (38%), Gaps = 80/289 (27%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVAD-----------TIPGSEERVI-------------------IIY-----SSPT 182
A++ VA TI G+ + +I I Y S+P
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 219
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDA-------------LLKVHDRIIEEDLF--- 226
A Q + D AA T S+ A L K+H +++ F
Sbjct: 220 IFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPELTKLHQLAMQQTPFPPL 279
Query: 227 -----------------------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
G +S D T L +PN+++GC++G++G I
Sbjct: 280 GQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 339
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+R +GA I++ A +++ + I+G P A Y ++ L
Sbjct: 340 EIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 383
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 95
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 317 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 369
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 370 ANISLAQYLINARLTS 385
>gi|383858850|ref|XP_003704912.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Megachile rotundata]
Length = 624
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 100/411 (24%), Positives = 179/411 (43%), Gaps = 80/411 (19%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIY 178
G+ + D RIL S +G +IG+ G+ ++ + + T+A++ V D + GS E+ I IY
Sbjct: 180 GSGRQTDFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRKDNV-GSLEKAITIY 238
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P +C +A K+ + + +E ++ N+
Sbjct: 239 GNP-----------------------ENCT--NACKKILEVMQQE-------ANSINKGE 266
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
IT ++L NN++G ++GK G I+R+ +T I V + + + N + ++ + G
Sbjct: 267 -ITLKILAHNNLIGRIIGKGGTTIKRIMQDTDTKITVSSINDIN--SFNLERIITVKGTI 323
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS 358
+A +S+ L Q+ D QA Q+ P +HP+
Sbjct: 324 ENMSKAESMISSKLRQSYENDL------QAMAPQSMMFP-----GLHPMA---------- 362
Query: 359 LHGMPSTPWMGGYGDQPSRMGSGSI-----NSCPPGQ-MGEVSAEFSMKILCSAGKIGGV 412
M ST MG P GSG S PP Q + + + + +G +
Sbjct: 363 ---MMSTAGMGYSSRGPGLYGSGPAPYPYQASLPPQQGVPATDTQETAFLYIPNSSVGAI 419
Query: 413 IGKGGFNVKQLQQETGASIHVEDAPTDSD----ERVIRASAFEGLWNPRSQTIDAILQLQ 468
IG G +++ + + +GAS+ + AP + D ++ R G +P SQ L +
Sbjct: 420 IGTKGSHIRNIIRFSGASVKI--APIEQDKPAEQQTERKVTIVG--SPESQWKAQYLIFE 475
Query: 469 NKTSEFSEKGT----ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E GT +T +LVPS++VG I+G+GG + E++R T + I++
Sbjct: 476 KMREEGFVAGTDDVRLTIEILVPSAQVGRIIGKGGQNVRELQRVTGSIIKL 526
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 88/183 (48%), Gaps = 15/183 (8%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+F ++IL + +G +IG+ G ++Q+ Q T A + V D+ + +A G NP
Sbjct: 186 DFPLRILVQSDMVGAIIGRQGSTIRQITQMTRARVDVHRK--DNVGSLEKAITIYG--NP 241
Query: 457 RSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ T IL++ + + KG IT ++L ++ +G I+G+GG I + + T I
Sbjct: 242 ENCTNACKKILEVMQQEANSINKGEITLKILAHNNLIGRIIGKGGTTIKRIMQDTDTKIT 301
Query: 515 VVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSYQN 569
V + D + + E I+ ++G+ E++ A QS+ Q+M Q +
Sbjct: 302 V----SSINDINSFNLERIITVKGTIENMSKAESMISSKLRQSYENDLQAMAPQSMMFPG 357
Query: 570 INP 572
++P
Sbjct: 358 LHP 360
>gi|395536909|ref|XP_003770451.1| PREDICTED: poly(rC)-binding protein 3 isoform 2 [Sarcophilus
harrisii]
Length = 361
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 91/358 (25%), Positives = 156/358 (43%), Gaps = 86/358 (24%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPP--APMADM------HPL------ 347
+ ++ ++P K +P P+S P + G + P A A++ PL
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQHQPLPAYTIQ 221
Query: 348 GNSSWPARN-SSLH--GMPSTPW----------------MGGYGDQPSRMG-SGSINSCP 387
G + P + + LH M TP+ + + + MG S +++ P
Sbjct: 222 GQYAIPHPDLTKLHQLAMQQTPFPPLGQTTPAFPGEKLPLHSSEEAQNLMGQSPGLDASP 281
Query: 388 PGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
P E++ + IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 282 PASTHELTIPNDL--------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 331
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++ +
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT 65
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + D I + N T+ + K +T RL+VP+S+ G ++G+GG I
Sbjct: 66 DAIFKAFAMIAYKFEE--DIINSMSNSTA--TSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 122 EIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/289 (22%), Positives = 111/289 (38%), Gaps = 80/289 (27%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVAD-----------TIPGSEERVI-------------------IIY-----SSPT 182
A++ VA TI G+ + +I I Y S+P
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 187
Query: 183 KIAKTQNKDDDSAAETKKESM----EP---------HCAAQDALLKVHDRIIEEDLF--- 226
A Q + D AA T S+ +P + L K+H +++ F
Sbjct: 188 IFAGGQVRADPLAASTANLSLLLQHQPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPL 247
Query: 227 -----------------------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
G + D T L +PN+++GC++G++G I
Sbjct: 248 GQTTPAFPGEKLPLHSSEEAQNLMGQSPGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 307
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+R +GA I++ A +++ + I+G P A Y ++ L
Sbjct: 308 EIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 351
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 49
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 337
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 338 ANISLAQYLINARLTS 353
>gi|348519761|ref|XP_003447398.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 3 [Oreochromis niloticus]
Length = 588
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 89/401 (22%), Positives = 168/401 (41%), Gaps = 62/401 (15%)
Query: 120 FGNSQPA--DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVII 176
+G+ +P D R+L P++ +G +IGK GN +K + ++TQ+K+ + G+ E+ I
Sbjct: 189 YGSPRPRQHDFPLRMLVPTQFVGAIIGKEGNTIKDVTKQTQSKVDIHRKENAGAAEKPIT 248
Query: 177 IYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE 236
I+S+P E AA +L + + +++
Sbjct: 249 IHSTP----------------------EGCSAACRMILDIMQK----------EANETKT 276
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
I ++L N++VG L+GK G ++++ +TG I + L N + + + G
Sbjct: 277 TEDIPLKILAHNSLVGRLIGKEGRNLKKIEEDTGTKITISSLQDL--TIYNPERTITVKG 334
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN 356
+ +A E++ L + ++ N + P +++ LG S
Sbjct: 335 SIDACCKAEVEITKKLRE---------AYENDIAAINQQANLIPGLNLNALGIFS----- 380
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
G+P P G + N + + + + + +G +IGK
Sbjct: 381 ---SGLPVLPPAAGPRSAVPAVAPAGYNPF----LQQAPEQEVVYLFIPTQAVGALIGKK 433
Query: 417 GFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS- 475
G ++KQL GASI + AP +S + R G + + I + + FS
Sbjct: 434 GQHIKQLAHFAGASIKI--APAESPDVTERMVIITGTPEAQFKAQGRIFGKLKEENFFSA 491
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 492 KEEVKLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIV 532
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 83/203 (40%), Gaps = 38/203 (18%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT-IPGSEERVIIIY 178
F P V + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 407 FLQQAPEQEVVYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAESPDVTERMVIIT 466
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+P K Q + + ++ EE+ F E
Sbjct: 467 GTPEAQFKAQGR-------------------------IFGKLKEENFFSA------KEEV 495
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-- 296
+ + VP++ G ++GK G + L++ T A + ++P D+ P N + V+ISG
Sbjct: 496 KLETHIKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENDEVFVKISGHF 552
Query: 297 -KPNVAKRALYEVSTLLHQNPRK 318
A+R + E+ + Q +K
Sbjct: 553 FASQTAQRKIREIIQQVKQQEQK 575
>gi|431908994|gb|ELK12585.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Pteropus
alecto]
Length = 613
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 101/418 (24%), Positives = 177/418 (42%), Gaps = 81/418 (19%)
Query: 114 SSREQSFGNS---QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQGSPGSVSKPKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGSVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G S + P Q + S ++ + A +
Sbjct: 375 -LFPPTS----GMP-----------PPTSGPPSAMTPPYPQFEQQSETETVHLFIPALSV 418
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 419 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 473
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHV-------INEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 474 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTASTSAKPVNELQNLSSAEVVV 531
>gi|224097170|ref|XP_002310862.1| predicted protein [Populus trichocarpa]
gi|222853765|gb|EEE91312.1| predicted protein [Populus trichocarpa]
Length = 245
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 77/131 (58%), Gaps = 10/131 (7%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
++ +++CS G G +IG GG V+ LQ +TGASI T+SD+R++ SA E L +
Sbjct: 80 SQVQFRMICSHGAAGRIIGTGGSVVRALQNQTGASIIFARPITNSDDRLVTVSALENLES 139
Query: 456 PRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
S +A+L + ++ E E+ T+T LL+PS+KV C++G+GG V +EM
Sbjct: 140 SHSPAQNALLLVFARSIEHDIERARSLGLIEEITVTATLLLPSNKVYCLIGRGGRVDSEM 199
Query: 506 RRRTQADIRVV 516
T ADI+++
Sbjct: 200 IETTGADIQIM 210
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 86/170 (50%), Gaps = 30/170 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R++C G +IG G++V++L+ +T A I A I S++R++ +
Sbjct: 84 FRMICSHGAAGRIIGTGGSVVRALQNQTGASIIFARPITNSDDRLVTV------------ 131
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL-----FGGMASDDDNENSTITARL 244
SA E + S P AQ+ALL V R IE D+ G + E T+TA L
Sbjct: 132 ----SALENLESSHSP---AQNALLLVFARSIEHDIERARSLGLI------EEITVTATL 178
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
L+P+N V CL+G+ G V + TGA+I+++ D+ A D +VQ+
Sbjct: 179 LLPSNKVYCLIGRGGRVDSEMIETTGADIQIMQGDQFFDLASKNDAVVQV 228
>gi|118792630|ref|XP_320427.3| AGAP012103-PA [Anopheles gambiae str. PEST]
gi|116116989|gb|EAA00333.3| AGAP012103-PA [Anopheles gambiae str. PEST]
Length = 494
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 94/398 (23%), Positives = 170/398 (42%), Gaps = 73/398 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIYSSPTKIAKT 187
R+L S +G +IG+ G+ ++ + ++++A++ V D + GS E+ I IY +P
Sbjct: 67 LRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNV-GSVEKAITIYGNP------ 119
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS-TITARLLV 246
E A +L+V M + ++ N I ++L
Sbjct: 120 ----------------ENCTMACKKILEV------------MQQEANSTNKGEICLKILA 151
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G +
Sbjct: 152 HNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--SSFNLERIITVKGSIENMSKGES 209
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA-PMADMHPLGNSSWPARNSSLHGMPST 365
++S L Q+ D QA Q P PMA M GN GM T
Sbjct: 210 QISAKLRQSYEND------LQALAPQTIMFPGLHPMAMMSTAGN-----------GMGFT 252
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
G S GSG+ PG + + + + +G +IG G +++ + +
Sbjct: 253 GRTAGATASAS--GSGA-TGMYPGSNFPIEVQETTYLYIPNNAVGAIIGTKGLHIRNIIR 309
Query: 426 ETGASIHVEDAPTDSD----ERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT-- 479
+GAS+ + AP ++D ++ R G P +Q L + E GT
Sbjct: 310 FSGASVKI--APLEADKPQEQQTERKVTIIG--TPEAQWKAQYLIFEKMREEGFVSGTDD 365
Query: 480 --ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+T + VPS++VG I+G+GG + E++R T + I++
Sbjct: 366 VRLTVEIFVPSAQVGRIIGKGGQNVRELQRVTGSIIKL 403
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEER 173
+Q ++ + +IL + IG +IGK+GN +K + ++T KITV+ D + ER
Sbjct: 134 QQEANSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDISSFNLER 193
Query: 174 VIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD 233
+I + S ++K +++ ++ + ++ +H + GM
Sbjct: 194 IITVKGSIENMSKGESQISAKLRQSYENDLQALAPQTIMFPGLHPMAMMSTAGNGMGFTG 253
Query: 234 DNENSTITAR----------------------LLVPNNMVGCLLGKRGDVIQRLRSETGA 271
+T +A L +PNN VG ++G +G I+ + +GA
Sbjct: 254 RTAGATASASGSGATGMYPGSNFPIEVQETTYLYIPNNAVGAIIGTKGLHIRNIIRFSGA 313
Query: 272 NIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
++++ P + P T+ V I G P +A Y +
Sbjct: 314 SVKIAPLEADKPQEQQTERKVTIIGTPEAQWKAQYLI 350
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 76/149 (51%), Gaps = 10/149 (6%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+F +++L + +G +IG+ G ++ + Q++ A + V D+ V +A G NP
Sbjct: 64 DFPLRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRK--DNVGSVEKAITIYG--NP 119
Query: 457 RSQTI--DAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ T+ IL++ + + + KG I ++L ++ +G I+G+ G+ I + + T I
Sbjct: 120 ENCTMACKKILEVMQQEANSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 179
Query: 515 VVGARVKLQDPHPGSSECIVDIRGSSEHL 543
V + D + E I+ ++GS E++
Sbjct: 180 V----SSINDISSFNLERIITVKGSIENM 204
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 42/94 (44%), Gaps = 11/94 (11%)
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
R ++ G P W Y G ++ G +++I + ++G +IG
Sbjct: 332 RKVTIIGTPEAQWKAQYLIFEKMREEGFVS-------GTDDVRLTVEIFVPSAQVGRIIG 384
Query: 415 KGGFNVKQLQQETGASI----HVEDAPTDSDERV 444
KGG NV++LQ+ TG+ I H AP D + V
Sbjct: 385 KGGQNVRELQRVTGSIIKLPEHTASAPVDEETTV 418
>gi|357479529|ref|XP_003610050.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355511105|gb|AES92247.1| Poly(rC)-binding protein [Medicago truncatula]
Length = 431
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 93/190 (48%), Gaps = 32/190 (16%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P V+R++ P K+G +IG+ G ++K EET A+I V D G+ +R+++I
Sbjct: 41 PGHCVFRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVLDAPVGTPDRIVLI------- 93
Query: 185 AKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST---- 239
+ KE +E P A DA+L++ R+ G++ D+N +
Sbjct: 94 -------------SGKEDLEAPLSPAMDAILRIFKRV------SGLSETDNNNTAAAGVA 134
Query: 240 -ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+ RLLV + L+GK+G I+ ++ TGA IRVL D LP A + ++ + G+
Sbjct: 135 LCSIRLLVASTQAINLIGKQGSSIKAIQENTGAVIRVLSGDELPSYAGADERIIDLQGET 194
Query: 299 NVAKRALYEV 308
+AL V
Sbjct: 195 LKVLKALEAV 204
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 81/160 (50%), Gaps = 18/160 (11%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G +K+ +ET A I V DAP + +R++ S E L P S
Sbjct: 46 FRLIVPVVKVGIIIGRKGELIKKTCEETHARIRVLDAPVGTPDRIVLISGKEDLEAPLSP 105
Query: 460 TIDAILQLQNKTSEFSEK----------GTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
+DAIL++ + S SE + RLLV S++ ++G+ G I ++ T
Sbjct: 106 AMDAILRIFKRVSGLSETDNNNTAAAGVALCSIRLLVASTQAINLIGKQGSSIKAIQENT 165
Query: 510 QADIRVVGARVKLQDPHP---GSSECIVDIRGSSEHLISA 546
A IRV+ D P G+ E I+D++G + ++ A
Sbjct: 166 GAVIRVLSG-----DELPSYAGADERIIDLQGETLKVLKA 200
>gi|148223740|ref|NP_001083021.1| poly(rC)-binding protein 3 [Danio rerio]
gi|134025331|gb|AAI35089.1| Zgc:162999 protein [Danio rerio]
Length = 350
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/352 (24%), Positives = 152/352 (43%), Gaps = 62/352 (17%)
Query: 115 SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
S+ QS G T+ R+L +++G +IGK G VK +REE+ A+I V++ ER+
Sbjct: 4 SKVQSEGGLNVTLTI-RLLMHGKEVGSIIGKKGETVKKMREESSARINVSEG--NCPERI 60
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMAS 231
+ I + PT DA+ K I EED+ M++
Sbjct: 61 VTI-TGPT----------------------------DAIFKAFAMIAYKFEEDIINSMSN 91
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
+T RL+VP + G L+GK G I+ +R TGA ++V D LP +T+
Sbjct: 92 SQATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV-AGDMLPN---STERA 147
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSP--PAPMAD 343
V ISG P + + ++ ++ ++P K +P P++ P + G + AP
Sbjct: 148 VTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPATAPVIFSGGQVRADTLTAPATA 207
Query: 344 MHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF----- 398
L P ++ G + P +++ ++ P +G+ + F
Sbjct: 208 NLSLLLQHQPLPAYTIQGQYAIPH-----PDLTKLHQLAMQQTPFTSLGQTTPAFPGVDA 262
Query: 399 -----SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+ ++ IG +IG+ G + +++Q +GA I + +A S +R I
Sbjct: 263 SSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSDRQI 314
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 86/161 (53%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+ A I+V + + ER++ +
Sbjct: 10 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESSARINVSEG--NCPERIVTITGPT 67
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + D I + N S+ + K +T RL+VP+S+ G ++G+GG I
Sbjct: 68 DAIFKAFAMIAYKFEE--DIINSMSN--SQATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
EMR T A ++V G D P S+E V I G+ E +I
Sbjct: 124 EMRESTGAQVQVAG------DMLPNSTERAVTISGTPEAII 158
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/266 (21%), Positives = 107/266 (40%), Gaps = 61/266 (22%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSQATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEMREST 129
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDD----------------------- 193
A++ VA D +P S ER + I +P I + +
Sbjct: 130 GAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPATAPV 189
Query: 194 --SAAETKKESMEPHCAAQDALL-----------------------KVHDRIIEEDLFGG 228
S + + +++ A +LL K+H +++ F
Sbjct: 190 IFSGGQVRADTLTAPATANLSLLLQHQPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFTS 249
Query: 229 MASDD------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
+ D + T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 250 LGQTTPAFPGVDASSQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANA---- 305
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEV 308
++D + I+G P A Y +
Sbjct: 306 -MEGSSDRQITITGTPANISLAQYLI 330
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 42/73 (57%), Gaps = 13/73 (17%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS- 539
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSS+ + I G+
Sbjct: 268 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANAMEGSSDRQITITGTP 320
Query: 540 -----SEHLISAH 547
+++LI+A
Sbjct: 321 ANISLAQYLINAR 333
>gi|12597878|gb|AAG60186.1|AC084763_6 putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|31433543|gb|AAP55041.1| KH domain-containing protein, putative, expressed [Oryza sativa
Japonica Group]
gi|125532979|gb|EAY79544.1| hypothetical protein OsI_34673 [Oryza sativa Indica Group]
gi|125575714|gb|EAZ16998.1| hypothetical protein OsJ_32483 [Oryza sativa Japonica Group]
gi|215769329|dbj|BAH01558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 458
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 100/194 (51%), Gaps = 25/194 (12%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D+V+R++ P K+G +IG+ G ++K L EET+AK+ V + G+ ER++++
Sbjct: 53 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLV------- 105
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS--TITA 242
+ +D A E + P A DAL++V R+ + G A + A
Sbjct: 106 ----SGKEDPALE-----LPP---AMDALMRVFKRV--SGITDGAAEGTQAATAPGVCAA 151
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD-RLPPCAMNTDE-MVQISGKPNV 300
RLLVP L+GK+G I+ ++ TGA IRV+ D R P + DE +V+I G+
Sbjct: 152 RLLVPGAQAINLIGKQGASIKAIQEGTGATIRVISIDERERPFYVIEDERIVEIQGETEK 211
Query: 301 AKRALYEVSTLLHQ 314
+AL VS L +
Sbjct: 212 VLKALQAVSNHLRK 225
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G +K+L +ET A + V + P + ER++ S E
Sbjct: 58 FRLVVPVLKVGSIIGRKGELIKRLVEETKAKVRVLEGPVGATERIVLVSGKEDPALELPP 117
Query: 460 TIDAILQLQNKTSEFSEK-----------GTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+DA++++ + S ++ G RLLVP ++ ++G+ G I ++
Sbjct: 118 AMDALMRVFKRVSGITDGAAEGTQAATAPGVCAARLLVPGAQAINLIGKQGASIKAIQEG 177
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
T A IRV+ + + + E IV+I+G +E ++ A
Sbjct: 178 TGATIRVISIDERERPFYVIEDERIVEIQGETEKVLKA 215
>gi|410969851|ref|XP_003991405.1| PREDICTED: poly(rC)-binding protein 3 [Felis catus]
Length = 361
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 89/366 (24%), Positives = 150/366 (40%), Gaps = 102/366 (27%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGG-----------------------------Q 332
+ ++ ++P K +P P+S P + G Q
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQ 221
Query: 333 NFHSPPAP-MADMH----------PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMG 379
++ P P + +H PLG N ++P LH + G
Sbjct: 222 GQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ-------- 273
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
S ++ PP E++ + IG +IG+ G + +++Q +GA I + +A
Sbjct: 274 SSGLDVSPPASTHELTIPNDL--------IGCIIGRQGTKINEIRQMSGAQIKIANATEG 325
Query: 440 SDERVI 445
S ER I
Sbjct: 326 SSERQI 331
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 110/289 (38%), Gaps = 80/289 (27%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVAD-----------TIPGSEERVI-------------------IIY-----SSPT 182
A++ VA TI G+ + +I I Y S+P
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 187
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDA-------------LLKVHDRIIEEDLF--- 226
A Q + D AA T S+ A L K+H +++ F
Sbjct: 188 IFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPL 247
Query: 227 -----------------------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
G +S D T L +PN+++GC++G++G I
Sbjct: 248 GQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDVSPPASTHELTIPNDLIGCIIGRQGTKIN 307
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+R +GA I++ A +++ + I+G P A Y ++ L
Sbjct: 308 EIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLINARL 351
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 49
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 285 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 337
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 338 ANISLAQYLINARLTS 353
>gi|255574127|ref|XP_002527979.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223532605|gb|EEF34391.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 416
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 87/357 (24%), Positives = 153/357 (42%), Gaps = 78/357 (21%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D VYR++ P K+G +IG+ G ++K + ET+A+I + D P +R+++I
Sbjct: 24 PGDNVYRLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLI------- 76
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI---- 240
S E + ++ P A DA+L+V R+ G A + D S +
Sbjct: 77 ---------SGKEEPEAALSP---AMDAVLRVFKRV-----SGLSAGEADAMGSAVAGAA 119
Query: 241 --TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+ +LLV ++ L+GK+G I+ ++ T A +RVL + P A + + +V+I G+
Sbjct: 120 FSSVKLLVASSQAINLIGKQGSTIKSIQESTAATVRVLAEEEAPSYATSDERIVEIHGEA 179
Query: 299 NVAKRALYEVSTLLHQ-------------------------NPRKDKPPSSFPQAYGGQN 333
+ +AL V L + + R DK S P
Sbjct: 180 SKVLKALEGVIGQLRKFLVDHTVVPIFEKTHNAIISQDRSADARADKTQPSIPSLTA--- 236
Query: 334 FHSPPAPMADM---HPLGNSSWPA---RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCP 387
HS PAP + + L P+ R S L + +G Q S +G
Sbjct: 237 LHSAPAPQVGIGSEYSLSLKRDPSIYDRESHLDQKIPQSGLLLFG-QDSSLG-----GLR 290
Query: 388 PGQMGEVSAEF------SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT 438
P +G +A +M++ S + +IG GG N+ +++ +GA + ++++ T
Sbjct: 291 PTGLGRAAAPIVTQMTQTMQVPLSYAE--DIIGVGGSNIAYIRRTSGAILTIQESRT 345
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQT 460
+++ K+G +IG+ G +K++ ET A I + D P +R++ S E S
Sbjct: 30 RLIVPVAKVGSIIGRKGELIKKMCVETRARIRILDGPPSISDRIVLISGKEEPEAALSPA 89
Query: 461 IDAILQLQNKTSEFS--EKGTI----------TTRLLVPSSKVGCILGQGGHVINEMRRR 508
+DA+L++ + S S E + + +LLV SS+ ++G+ G I ++
Sbjct: 90 MDAVLRVFKRVSGLSAGEADAMGSAVAGAAFSSVKLLVASSQAINLIGKQGSTIKSIQES 149
Query: 509 TQADIRVVGARVKLQDP-HPGSSECIVDIRGSSEHLISA 546
T A +RV+ + P + S E IV+I G + ++ A
Sbjct: 150 TAATVRVLAEE---EAPSYATSDERIVEIHGEASKVLKA 185
>gi|302816563|ref|XP_002989960.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
gi|300142271|gb|EFJ08973.1| hypothetical protein SELMODRAFT_428421 [Selaginella moellendorffii]
Length = 393
Score = 83.6 bits (205), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 81/355 (22%), Positives = 145/355 (40%), Gaps = 86/355 (24%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P K+G +IG+ G VK + EET+++I + D +PG+ ER++++
Sbjct: 46 PGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLV------- 98
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE-------- 236
SA E + ++ P A D LL+VH R+ E S D E
Sbjct: 99 ---------SAKEDPEATISP---AMDGLLRVHRRVTE-------GSSGDGEPVEHIILP 139
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
+ + +RLLV G L+G++ + LP CA+ D MV++ G
Sbjct: 140 SGLVQSRLLVTATQAGSLIGRQ--------------------EELPLCALADDRMVEVQG 179
Query: 297 KPNVAKRALYEVSTLLHQ--NPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPA 354
+ ++A+ V + L + R F ++ G ++ +S
Sbjct: 180 EILKVQKAMELVVSHLRKFLVDRSVLQLFEFNVSFAGSRSIGYKVHNGELQRAMSSQVQG 239
Query: 355 RNSSLHGMP-STPWMGG---------YGDQ--------------PSRMGSGSINSCPPGQ 390
+ ++ +TP + Y DQ P R+ S PP +
Sbjct: 240 QQAAAIATSWATPTVAATTPYSSTDYYADQAQSQHYAVSMYGGDPGRVDVTSTTPAPPAE 299
Query: 391 MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
VS + + +L + +IG G N+ +++ +GA+I +++ P E I
Sbjct: 300 --SVSQQLQVPLLYA----DAIIGTAGANINYMRRTSGATISIQETPNAPGEMTI 348
Score = 47.0 bits (110), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
Query: 380 SGSINSCPPGQMGEVS--AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP 437
+GS PPG+ + +++ K+G +IG+ G VK++ +ET + I + D
Sbjct: 29 AGSQEETPPGERKWPGWPGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGV 88
Query: 438 TDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSE------------KGTITTRLL 485
+ ER++ SA E S +D +L++ + +E S G + +RLL
Sbjct: 89 PGTLERIVLVSAKEDPEATISPAMDGLLRVHRRVTEGSSGDGEPVEHIILPSGLVQSRLL 148
Query: 486 VPSSKVGCILGQ 497
V +++ G ++G+
Sbjct: 149 VTATQAGSLIGR 160
>gi|387915508|gb|AFK11363.1| alphaCP-3 [Callorhinchus milii]
Length = 349
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 95/381 (24%), Positives = 158/381 (41%), Gaps = 77/381 (20%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLV 246
DA+ K I EED+ M + +T RL+V
Sbjct: 66 ---------------------DAIFKAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + +
Sbjct: 105 PASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGMPDAIIQCVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
++ ++ ++P K +P P+S P + G ++ A HP A +
Sbjct: 161 QICVVMLESPPKGATIPYRPKPASAPVIFAGGQAYTIQGQCAIPHPDDACLLSAEYKT-- 218
Query: 361 GMPSTPWMGGYGDQPSRM------------GSGSINSCPPGQMGEVSAEFSM-------- 400
+ ST W PS G + +C E S + M
Sbjct: 219 ALTSTLWRSPQLAHPSSQLKEAAWRPESLRGKMELKNC-----NEESENWGMDANPQAST 273
Query: 401 -KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
++ IG +IG+ G + +++Q +GA I + +A S ER I + +P +
Sbjct: 274 HELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTERQITITG-----SPANI 328
Query: 460 TIDAILQLQNKTSEFSEKGTI 480
++ L TSE S G+I
Sbjct: 329 SLAQYLINARLTSEVSGMGSI 349
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 81/163 (49%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++ +
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITG-- 63
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 64 ----PTDAIFKAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGMPDAII 156
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K N+S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAFKFEEDINNSMTNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I P I
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGMPDAI 155
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Query: 451 EGLWNPRSQTIDAILQLQNKTSEFSEKG------TITTRLLVPSSKVGCILGQGGHVINE 504
E W P S + ++L+N E G T L +P+ +GCI+G+ G INE
Sbjct: 239 EAAWRPES--LRGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINE 296
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS 556
+R+ + GA++K+ + GS+E + I GS ++ A + +TS
Sbjct: 297 IRQMS-------GAQIKIANATEGSTERQITITGSPANISLAQYLINARLTS 341
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEE 172
N E ++ P + + + P+ IG +IG+ G + +R+ + A+I +A+ GS E
Sbjct: 257 NEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTE 316
Query: 173 RVIIIYSSPTKIAKTQ 188
R I I SP I+ Q
Sbjct: 317 RQITITGSPANISLAQ 332
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 63
Query: 297 KPNVAKRALY--------EVSTLLHQNPRKDKPPSSF 325
+ +A +++ + +P KPP +
Sbjct: 64 PTDAIFKAFAMIAFKFEEDINNSMTNSPATSKPPVTL 100
>gi|198469242|ref|XP_001354960.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
gi|198146781|gb|EAL32016.2| GA14212 [Drosophila pseudoobscura pseudoobscura]
Length = 521
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 98/407 (24%), Positives = 180/407 (44%), Gaps = 72/407 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
G + AD RIL S +G +IG+ G+ ++++ ++++A++ V GS E+ I IY
Sbjct: 78 GPGRQADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG 137
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P ++ +A + E M+ Q+AL S + E
Sbjct: 138 NP--------ENCTNACKRILEVMQ-----QEAL-----------------STNKGE--- 164
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
I ++L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G
Sbjct: 165 ICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDIN--SFNLERIITVKGLIE 222
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA ++ST L Q+ D QA Q+ P +HP+ S P
Sbjct: 223 NMSRAENQISTKLRQSYENDL------QAMAPQSLMFP-----GLHPMAMMSTPG----- 266
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+GM M Q M + PP ++ + I +A +G +IG G +
Sbjct: 267 NGMVFNTSMPFPSCQSFAMSKTPASVVPPVFPNDLQETTYLYIPNNA--VGAIIGTKGSH 324
Query: 420 VKQLQQETGASIHVEDAPTDSDE--------RVIRASAFEGLWNPRSQTIDAILQLQNKT 471
++ + + + AS+ + AP D+D+ +V EG W + + + +
Sbjct: 325 IRSIMRFSNASLKI--APLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKM-----RE 377
Query: 472 SEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
F ++ +T LLV SS+VG I+G+GG + E++R T + I++
Sbjct: 378 EGFMCGTDDVRLTVELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL 424
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 86/185 (46%), Gaps = 17/185 (9%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERVIRASAFEGLW 454
A+F ++IL + +G +IG+ G ++ + Q++ A + V S E+ I
Sbjct: 83 ADFPLRILVQSEMVGAIIGRQGSTIRTITQQSRARVDVHRKENVGSLEKSITIYG----- 137
Query: 455 NPRSQT--IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
NP + T IL++ + + + KG I ++L ++ +G I+G+ G+ I + + T
Sbjct: 138 NPENCTNACKRILEVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTK 197
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSY 567
I V + D + + E I+ ++G E++ A QS+ Q+M Q +
Sbjct: 198 ITV----SSINDINSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMF 253
Query: 568 QNINP 572
++P
Sbjct: 254 PGLHP 258
>gi|327275834|ref|XP_003222677.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Anolis carolinensis]
Length = 576
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 169/399 (42%), Gaps = 75/399 (18%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPT 182
QP D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I I+S+P
Sbjct: 192 QPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTP- 250
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
E AA +L++ + + D +
Sbjct: 251 ---------------------EGCSAACKMILEIMQK----------EAKDTKTADEVPL 279
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGSIENCC 337
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
RA E+ + + ++ + S P ++ +G +PA ++++
Sbjct: 338 RAEQEIMKKVRE---------AYENDVAAMSLQSHLIPGLNLAAVG--LFPASSNAVPPP 386
Query: 363 PSTPWMGGYGDQPSRMGSGSINS-CPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVK 421
PS S G+ +S PP Q ++ + A +G +IGK G ++K
Sbjct: 387 PS-----------SVSGAAPYSSFLPPEQE-------TVHVFIPAQAVGAIIGKKGQHIK 428
Query: 422 QLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----E 476
QL + ASI + AP ++ + +R G P A ++ K E + E
Sbjct: 429 QLSRFASASIKI--APAETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGPKE 483
Query: 477 KGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 484 EVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 522
>gi|449524744|ref|XP_004169381.1| PREDICTED: poly(rC)-binding protein 3-like [Cucumis sativus]
Length = 224
Score = 83.2 bits (204), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 84/157 (53%), Gaps = 24/157 (15%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P K+G +IG+ G+++K + EET+A+I V D G+ +RV++I
Sbjct: 78 PGDCVFRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISG----- 132
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
K+E P A DA+++V R+ G ++D+ + S + RL
Sbjct: 133 --------------KEELESPLSPAMDAVIRVFKRV-----SGLSENEDEAKASFCSIRL 173
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRL 281
LV + L+GK+G +I+ ++ TGA++RVL L
Sbjct: 174 LVASTQAINLIGKQGSLIKSIQESTGASVRVLSGGML 210
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G +K++ +ET A I V D + +RV+ S E L +P S
Sbjct: 83 FRLIVPVVKVGSIIGRKGDLIKKMCEETRARIRVLDGAVGTPDRVVLISGKEELESPLSP 142
Query: 460 TIDAILQLQNKTSEFSEK------GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+DA++++ + S SE + RLLV S++ ++G+ G +I ++ T A +
Sbjct: 143 AMDAVIRVFKRVSGLSENEDEAKASFCSIRLLVASTQAINLIGKQGSLIKSIQESTGASV 202
Query: 514 RVV 516
RV+
Sbjct: 203 RVL 205
>gi|357117002|ref|XP_003560265.1| PREDICTED: uncharacterized protein LOC100827626 [Brachypodium
distachyon]
Length = 656
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/193 (31%), Positives = 87/193 (45%), Gaps = 30/193 (15%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+LC GG+IGK G I+K ET A I V + G ERVI I
Sbjct: 283 FRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITI------------ 330
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRI--IEEDLFGGMASDDDNENSTITARLLVP 247
+ ES H Q A+L + DR+ +E +L G +AR+LVP
Sbjct: 331 --------SALESPGKHSKVQSAILCIFDRMEEVERNLMFG--------KPECSARVLVP 374
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ L+G G +I+ + TGA I +L +P CA N + ++QI+G + AL+
Sbjct: 375 KSQFSSLVGLGGAIIKEMVKSTGARIEILDEMDVPACASNCERVLQITGNLVNVRDALFV 434
Query: 308 VSTLLHQNPRKDK 320
VS L + K
Sbjct: 435 VSEKLRNHAFSSK 447
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 121/279 (43%), Gaps = 51/279 (18%)
Query: 262 IQRLRSETGANIRVLP-ADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK 320
++ + SET A +RV A+ P + E+++I+G ++A+ +S+ L +
Sbjct: 161 LEAIASETNAELRVTSLAEGATPSVHSPKEVIEITGDRTTIRKAIVALSSYLQGDLHACS 220
Query: 321 PPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGS 380
+S + P+PM P +S P N YGD S + +
Sbjct: 221 LTTSV----------TTPSPM---FPWKSSEVPEPN--------------YGDLHSGVST 253
Query: 381 GSIN------SCPPGQMGEVSAE----FSMKILCSAGKIGGVIGKGGFNVKQLQQETGAS 430
N CP G V E S ++LC GG+IGK G +K + ETGAS
Sbjct: 254 KCANINVPWIDCPQDVAGNVETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETETGAS 313
Query: 431 IHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSE-----KGTITTRLL 485
I V + + ERVI SA E S+ AIL + ++ E K + R+L
Sbjct: 314 IDVGNPFSGCMERVITISALES-PGKHSKVQSAILCIFDRMEEVERNLMFGKPECSARVL 372
Query: 486 VPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQD 524
VP S+ ++G GG +I EM + T GAR+++ D
Sbjct: 373 VPKSQFSSLVGLGGAIIKEMVKST-------GARIEILD 404
>gi|410911650|ref|XP_003969303.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Takifugu rubripes]
Length = 581
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 93/398 (23%), Positives = 162/398 (40%), Gaps = 74/398 (18%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKI 184
+D R+L P++ +G +IGK G+ +++L ++T +KI + G+ E+ I I+S+P
Sbjct: 193 SDIPLRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHSTP--- 249
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
+ +A T E M+ + + EE I ++
Sbjct: 250 -----EGSSNACRTIMEIMQKEA--------IDTKFTEE----------------IPLKI 280
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LV NN VG L+GK G ++++ +TG I + L N + + + G RA
Sbjct: 281 LVHNNFVGRLIGKEGRNLKKIEQDTGTKITISSLQDL--TVYNPERTITVKGAIENCGRA 338
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG--NSSWPARNSSLHGM 362
EV + + ++ N S P +++ LG S P S+ +
Sbjct: 339 EEEVMKKIRE---------AYESDVAAMNLQSNLIPGLNLNALGLFPSGTPGMGPSMSSL 389
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
P GGY S P + ++ + +G +IGK G ++KQ
Sbjct: 390 PPPGAHGGY----------SFGGNPESE--------TVHLFIPTLAVGAIIGKQGQHIKQ 431
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EK 477
L GASI + AP + + R G P A ++ K E + E+
Sbjct: 432 LSHFAGASIKI--APAEGMDPKHRMVIIVG---PPEAQFKAQCRIFGKLKEENFFGPKEE 486
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ + VPS G ++G+GG +NE++ T A++ V
Sbjct: 487 VKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEVVV 524
>gi|308798891|ref|XP_003074225.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
gi|116000397|emb|CAL50077.1| putative nucleic acid binding protein (ISS) [Ostreococcus tauri]
Length = 402
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 92/358 (25%), Positives = 147/358 (41%), Gaps = 80/358 (22%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
V+R+LC ++GG+IG+ G V+ + ET A++ V + ER ++I++ +
Sbjct: 16 AVFRVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAPRAR---- 71
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKV-----HDRIIEEDLFGGM------------- 229
D +T CAA++ +V R + ED G
Sbjct: 72 -----DGPGDT--------CAAREGARRVVRYLTRARAVTEDECDGARDESEDESDDDDD 118
Query: 230 --------ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSET-GANIRVLPADR 280
D + +T RLLVP G L+GK G+ IQ +R GA++ V +
Sbjct: 119 GRRGDGVGGQDLGRSTAHVTLRLLVPAGQAGHLIGKGGENIQEVRKRANGAHVAVQEVGQ 178
Query: 281 LPPCAMNTDEMVQISGKPN---VAKRALYE--------VSTLLHQNPRKDKPPSSFPQAY 329
+PPCA + D +V+I GKP VA A++E S L H P P +
Sbjct: 179 VPPCATSEDRVVEIHGKPKDVRVAADAVFESLKDYLVDSSVLGHYQPTVAAPAGANVGDV 238
Query: 330 G----GQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGY--GDQPSRMGSGSI 383
G G H APM M P+G + ++ +P P M G QP+ M
Sbjct: 239 GATAMGIGNHPMSAPMG-MAPVGMAPVGMAPGTMM-IPVMPMMTQMQPGMQPAGM----- 291
Query: 384 NSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD 441
PP S++I K+ V+G+ G N+ + Q +G + + + D++
Sbjct: 292 ---PP-------VHDSVEI--DGEKVANVLGEHGANISTIAQISGCQVSLIETNPDTN 337
Score = 48.5 bits (114), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/198 (22%), Positives = 81/198 (40%), Gaps = 51/198 (25%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI-----RASAFEGLWN 455
++LC+ ++GG+IG+ G V+ + ETGA + V + ER + RA G
Sbjct: 19 RVLCAETRVGGLIGRQGKRVRGIVTETGAQVKVLASTARCHERAVLIFAPRARDGPGDTC 78
Query: 456 PRSQTIDAILQLQNKTSEFSEK----------------------------------GTIT 481
+ +++ + +E +T
Sbjct: 79 AAREGARRVVRYLTRARAVTEDECDGARDESEDESDDDDDGRRGDGVGGQDLGRSTAHVT 138
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQD-----PHPGSSECIVDI 536
RLLVP+ + G ++G+GG I E+R+R GA V +Q+ P S + +V+I
Sbjct: 139 LRLLVPAGQAGHLIGKGGENIQEVRKRAN------GAHVAVQEVGQVPPCATSEDRVVEI 192
Query: 537 RGSSEHL-ISAHGTYQSF 553
G + + ++A ++S
Sbjct: 193 HGKPKDVRVAADAVFESL 210
>gi|313245372|emb|CBY40123.1| unnamed protein product [Oikopleura dioica]
Length = 412
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 95/423 (22%), Positives = 177/423 (41%), Gaps = 79/423 (18%)
Query: 105 GIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLRE--ETQAKIT 162
GI +W + FG DT ++L P+ +G +IGK G+ V+ + + +++A++
Sbjct: 15 GIFCAHWIKNPSPFGFGARGSPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVD 74
Query: 163 VADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIE 222
V ++V IY +P C A A +++ + + +
Sbjct: 75 VHRREGPGSDKVATIYGAPEA-----------------------CGA--AAIRILEIVRK 109
Query: 223 EDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
E+ DNE + ++L N ++G L+G+ G ++ ++ +TG I + L
Sbjct: 110 EE--------KDNE---LPLKVLAHNALIGRLIGRDGRNLKHVQDKTGTRIAISSMHELS 158
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQN--------- 333
P N D + I G+ A +++ L Q D S Y G N
Sbjct: 159 P--YNMDRTISIHGEVKGISEAEQQITEKLRQF-ETDMAAMSQQSLYPGLNSQQMQMFPG 215
Query: 334 FHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGE 393
SP AP PA N S G + + G+ S N+
Sbjct: 216 LQSPTAP------------PAYNVSYQG---SYFFKNVSQSVFFSGNSSSNNT------- 253
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE-DAPTDSDERVIRASAFEG 452
+ ++ +L +G +G +IG G +++ + + GASI + +A D+ RV E
Sbjct: 254 ---QETVTLLIPSGAVGAIIGSRGTHIRNISRIAGASIRIHVNADRDAKARVTIVGVPES 310
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
W + D +L+ + +E+G +TT++ +P VG I+G+GG + E++R T ++
Sbjct: 311 QWKAQFCIFD---KLKQEGWFGNEEGRLTTQITIPGKLVGRIIGKGGVNVRELQRITSSE 367
Query: 513 IRV 515
+ +
Sbjct: 368 VTI 370
>gi|297803502|ref|XP_002869635.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
gi|297315471|gb|EFH45894.1| hypothetical protein ARALYDRAFT_492216 [Arabidopsis lyrata subsp.
lyrata]
Length = 495
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 30/186 (16%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P K+G +IG+ G+ +K + EET+A+I V D + +R+++I
Sbjct: 71 PGDCVFRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI------- 123
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE-----NST 239
S E + M P A DA+L+V R+ G+ +DD++ ++
Sbjct: 124 ---------SGKEEPEAYMSP---AMDAVLRVFRRV------SGLPDNDDDDVQNAGSAF 165
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ RLLV + L+GK+G +I+ + +GA++R+L + P A + +V + G+
Sbjct: 166 CSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEAL 225
Query: 300 VAKRAL 305
+AL
Sbjct: 226 KILKAL 231
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G +K++ +ET A I V D P ++ +R++ S E S
Sbjct: 76 FRMIVPVSKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSP 135
Query: 460 TIDAILQL--------QNKTSEFSEKGTI--TTRLLVPSSKVGCILGQGGHVINEMRRRT 509
+DA+L++ N + G+ + RLLV S++ ++G+ G +I + +
Sbjct: 136 AMDAVLRVFRRVSGLPDNDDDDVQNAGSAFCSVRLLVASTQAINLIGKQGSLIKSIVENS 195
Query: 510 QADIRVVGARVKLQDP-HPGSSECIVDIRGSSEHLISA 546
A +R++ + P + E IVD++G + ++ A
Sbjct: 196 GASVRILSEE---ETPFYAAQDERIVDLQGEALKILKA 230
>gi|432931639|ref|XP_004081713.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Oryzias
latipes]
Length = 343
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 99/394 (25%), Positives = 167/394 (42%), Gaps = 78/394 (19%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEE 172
S++ QS G T+ R+L +++G +IGK G VK +REE+ A+I +++ E
Sbjct: 2 ESTKVQSEGGLNVTLTI-RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPE 58
Query: 173 RVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGM 229
R++ I + PT D + K I EED+ M
Sbjct: 59 RIVTI-TGPT----------------------------DTIFKAFAMIAYKFEEDIINSM 89
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
++ +T RL+VP + G L+GK G I+ +R TGA ++V D LP +T+
Sbjct: 90 SNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVA-GDMLP---NSTE 145
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSP------ 337
V ISG P + + ++ ++ ++P K +P P+S P + G +
Sbjct: 146 RAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQVSAELLKTTL 205
Query: 338 ----PAPMADMHPL----GNSSWPARN-SSLH--GMPSTPWMGGYGDQPSRMGSGSINSC 386
M P G + P + + LH M TP+ P+ G +++
Sbjct: 206 TPNLTLLMQQKCPAYTIQGQYAIPHPDLTKLHQLAMQQTPFTPLGQTTPAFPG---LDAA 262
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
PP E++ + IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 263 PPASTHELTIPNDL--------IGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQIT 314
Query: 447 ASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ + I+A L TSE + GT+
Sbjct: 315 ITGTPANISLAQYLINARL-----TSEVTGMGTL 343
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 86/161 (53%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++ +
Sbjct: 10 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT 67
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + D I + N S + K +T RL+VP+S+ G ++G+GG I
Sbjct: 68 DTIFKAFAMIAYKFEE--DIINSMSN--SPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
EMR T A ++V G D P S+E V I G+ E +I
Sbjct: 124 EMRESTGAQVQVAG------DMLPNSTERAVTISGTPEAII 158
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEMREST 129
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 130 GAQVQVAGDMLPNSTERAVTISGTPEAI 157
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 267 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANAMEGSSERQITITGTP 319
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 320 ANISLAQYLINARLTS 335
>gi|328720738|ref|XP_001949210.2| PREDICTED: poly(rC)-binding protein 3-like [Acyrthosiphon pisum]
Length = 436
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 89/338 (26%), Positives = 156/338 (46%), Gaps = 56/338 (16%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
N SS SF + + RIL R++G VIGK G VK++R+++ A++ ++D
Sbjct: 3 NVQQSSNGSSFNDYNDVNLTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLISD--GS 60
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDAL-LKVHDRIIEEDLFGG 228
+ ER++ I + I C A + + LKV E+ F
Sbjct: 61 TPERIVTITGTTNAI----------------------CKATELIGLKV------EEFFER 92
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
D + + +T +L+VP + G ++GK G I+ +R +GA I+V +D LP +T
Sbjct: 93 QNGDWNGPKAPLTFKLIVPASQCGFIIGKGGCKIKEIRESSGAAIQV-ASDMLPN---ST 148
Query: 289 DEMVQISGKPNVAKRALYEV-STLLHQNPRKDKPP-------SSFPQAYGGQNF----HS 336
+ +V I+G + +Y+V + LL PR P S F + G +F +
Sbjct: 149 ERLVSITGTTGTISQCVYQVCNVLLDSPPRSATIPYDPRSKTSGFASSAVGNDFGRQRTN 208
Query: 337 PPAPMADMHPLGNSSWPARN-SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVS 395
P A +A + LG +S N ++L + + G++ +R GSG + Q +
Sbjct: 209 PLASLAALG-LGTASTGGINPAALAALAGSQLR--TGNRQNRNGSGEHKN----QNSNSN 261
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
E ++ + IG VIG+ G + +++Q +GA +H+
Sbjct: 262 TE-TISMTVPNDLIGCVIGRRGSKIAEIRQISGALVHI 298
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 77/152 (50%), Gaps = 23/152 (15%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPR 457
+++IL ++G VIGKGG VK ++ ++GA + + D T ER++ G N
Sbjct: 21 LTIRILFHGREVGNVIGKGGETVKNIRDQSGARVLISDGST--PERIV---TITGTTNAI 75
Query: 458 SQTIDAILQLQNKTSEFSE---------KGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+ + I K EF E K +T +L+VP+S+ G I+G+GG I E+R
Sbjct: 76 CKATELI---GLKVEEFFERQNGDWNGPKAPLTFKLIVPASQCGFIIGKGGCKIKEIRES 132
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
+ A I+V D P S+E +V I G++
Sbjct: 133 SGAAIQVA------SDMLPNSTERLVSITGTT 158
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 40/77 (51%), Gaps = 1/77 (1%)
Query: 233 DDNENS-TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
+ N NS T T + VPN+++GC++G+RG I +R +GA + + + N D
Sbjct: 255 NQNSNSNTETISMTVPNDLIGCVIGRRGSKIAEIRQISGALVHIAKGEGTHENGENEDRH 314
Query: 292 VQISGKPNVAKRALYEV 308
+ I+G + A Y +
Sbjct: 315 ITITGNKDSISVAKYLI 331
>gi|45384194|ref|NP_990402.1| insulin-like growth factor 2 mRNA-binding protein 1 [Gallus gallus]
gi|82227598|sp|O42254.1|IF2B1_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1; AltName: Full=Zip code-binding protein
1; Short=ZBP-1; Short=Zipcode-binding protein 1
gi|2570921|gb|AAB82295.1| zipcode-binding protein [Gallus gallus]
Length = 576
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 169/398 (42%), Gaps = 73/398 (18%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPT 182
QP D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I I+S+P
Sbjct: 192 QPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTP- 250
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
E AA +L++ + + D +
Sbjct: 251 ---------------------EGCSAACKMILEIMQK----------EAKDTKTADEVPL 279
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGSIENCC 337
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
+A E+ + + ++ + S P ++ +G +PA ++++
Sbjct: 338 KAEQEIMKKVRE---------AYENDVAAMSLQSHLIPGLNLAAVG--LFPASSNAVPPP 386
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS+ + G S M PP Q ++ + A +G +IGK G ++KQ
Sbjct: 387 PSS--VSGAAPYSSFM--------PPEQE-------TVHVFIPAQAVGAIIGKKGQHIKQ 429
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EK 477
L + ASI + AP ++ + +R G P A ++ K E + E+
Sbjct: 430 LSRFASASIKI--APPETPDSKVRMVVITG---PPEAQFKAQGRIYGKLKEENFFGPKEE 484
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 485 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 522
>gi|356530338|ref|XP_003533739.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 443
Score = 82.8 bits (203), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 88/339 (25%), Positives = 157/339 (46%), Gaps = 57/339 (16%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P K+G +IG+ G ++K + EET+++I V D G+ +R++++
Sbjct: 50 PGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLV------- 102
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI---- 240
K+D AA + P A DA++++ R+ G +D +N+ S
Sbjct: 103 ---SGKEDPEAA------LSP---AMDAVVRIFKRV-----SGFSETDAENQESAAGLAF 145
Query: 241 -TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ RLLV + L+GK+G +I+ ++ T A++RVL D + A + +V+I G+
Sbjct: 146 SSIRLLVASTQAINLIGKQGSLIKSIQENTSASVRVLSGDEVQFYATANERIVEIQGEAL 205
Query: 300 VAKRALYEV-----------STLLHQNPRKDKPPSSFPQAYGGQN---FH--SPPAPMAD 343
+AL V S L + P S QA + H S + AD
Sbjct: 206 KVLKALEAVVGHLRKFLVDHSVLPLFEKTYNAPTSQDRQAETWSDKSLLHTSSRTSIFAD 265
Query: 344 MHPLG---NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGE---VSAE 397
+ PL +S R S L + M YG S G ++S G++G +
Sbjct: 266 I-PLSTKRDSVLADRESQLDLFLPSSTMSLYGQDSSLSG---VHSSALGRVGAPIVTTVI 321
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 436
+M+I S + +IG G N++ +++ +GA + V+++
Sbjct: 322 QTMQIPLSYAE--DIIGIQGTNIEYIRRTSGAILTVQES 358
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 97/198 (48%), Gaps = 19/198 (9%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ GK+G +IG+ G +K++ +ET + I V DAP + +R++ S E S
Sbjct: 55 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEDPEAALSP 114
Query: 460 TIDAILQLQNKTSEFSEKGT-----------ITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+DA++++ + S FSE + RLLV S++ ++G+ G +I ++
Sbjct: 115 AMDAVVRIFKRVSGFSETDAENQESAAGLAFSSIRLLVASTQAINLIGKQGSLIKSIQEN 174
Query: 509 TQADIRVV-GARVKLQDPHPGSSECIVDIRGSSEHLISAH----GTYQSFMTSGQSMKVQ 563
T A +RV+ G V+ + ++E IV+I+G + ++ A G + F+ + +
Sbjct: 175 TSASVRVLSGDEVQF---YATANERIVEIQGEALKVLKALEAVVGHLRKFLVDHSVLPLF 231
Query: 564 PSSYQNINPQQSSCQTMS 581
+Y Q +T S
Sbjct: 232 EKTYNAPTSQDRQAETWS 249
>gi|326511144|dbj|BAJ87586.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 450
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 97/194 (50%), Gaps = 25/194 (12%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P K+G +IG+ G ++K L EET+A++ V + G+ ER++++
Sbjct: 48 PGDNVFRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVLV------- 100
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS--TITA 242
SA E + P A DAL++V R+ + G A + A
Sbjct: 101 ---------SAKEDPGLELPP---AMDALIRVFKRV--NGISDGAAEGTQTSAAPGVCAA 146
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD-RLPPCAMNTDE-MVQISGKPNV 300
RL+VP L+GK+G I+ ++ TGA IRV+ D R P + DE +V+I G+
Sbjct: 147 RLVVPGAQAINLIGKQGASIKAIQEGTGATIRVISVDERDRPFYVTDDERIVEIQGETEK 206
Query: 301 AKRALYEVSTLLHQ 314
+AL VS L +
Sbjct: 207 VLKALQAVSNHLRK 220
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 87/160 (54%), Gaps = 15/160 (9%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE--GLWNPR 457
+++ K+G +IG+ G +K+L +ET A + V + P + ER++ SA E GL P
Sbjct: 53 FRMVVPVLKVGSIIGRKGELIKRLVEETKARVRVLEGPVGATERIVLVSAKEDPGLELPP 112
Query: 458 SQTIDAILQL---QNKTSEFSEKGTITT--------RLLVPSSKVGCILGQGGHVINEMR 506
+ +DA++++ N S+ + +GT T+ RL+VP ++ ++G+ G I ++
Sbjct: 113 A--MDALIRVFKRVNGISDGAAEGTQTSAAPGVCAARLVVPGAQAINLIGKQGASIKAIQ 170
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
T A IRV+ + + + E IV+I+G +E ++ A
Sbjct: 171 EGTGATIRVISVDERDRPFYVTDDERIVEIQGETEKVLKA 210
>gi|224121400|ref|XP_002330818.1| predicted protein [Populus trichocarpa]
gi|222872620|gb|EEF09751.1| predicted protein [Populus trichocarpa]
Length = 405
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 94/192 (48%), Gaps = 32/192 (16%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P K+G +IG+ G +VK + +ET+A+I + + G +R+++I
Sbjct: 8 PGDNVFRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLI------- 60
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI---- 240
K+E P A DA+++V R+ G + DN S
Sbjct: 61 ------------SGKEEPEAPQSPAMDAVMRVFKRV-----SGLSPGEGDNTGSAAAAAG 103
Query: 241 ----TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
+ RLLV ++ L+GK+G +I+ ++ TGA + V+ D LP A + + +V+I G
Sbjct: 104 SAFCSIRLLVASSQAINLIGKQGSIIKSIQENTGAAVHVMAEDELPSYATSDERIVEIHG 163
Query: 297 KPNVAKRALYEV 308
+ +AL V
Sbjct: 164 EAMKVFKALEAV 175
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 76/164 (46%), Gaps = 22/164 (13%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G VK++ ET A I + + P +R++ S E P+S
Sbjct: 13 FRLIVPLSKVGSIIGRRGELVKKMCDETRARIRILEGPLGISDRIVLISGKEEPEAPQSP 72
Query: 460 TIDAILQLQNKTSEFS--------------EKGTITTRLLVPSSKVGCILGQGGHVINEM 505
+DA++++ + S S + RLLV SS+ ++G+ G +I +
Sbjct: 73 AMDAVMRVFKRVSGLSPGEGDNTGSAAAAAGSAFCSIRLLVASSQAINLIGKQGSIIKSI 132
Query: 506 RRRTQADIRVVGARVKLQDPHPG---SSECIVDIRGSSEHLISA 546
+ T A + V+ +D P S E IV+I G + + A
Sbjct: 133 QENTGAAVHVMA-----EDELPSYATSDERIVEIHGEAMKVFKA 171
>gi|348537598|ref|XP_003456280.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 593
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 94/386 (24%), Positives = 160/386 (41%), Gaps = 70/386 (18%)
Query: 117 EQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVI 175
EQ FG+ T+ R+L +++G +IGK G VK +REE+ A+I +++ GS I
Sbjct: 116 EQEFGDGAMGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISE---GSCPERI 172
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASD 232
I + PT D + + I +EEDL +A+
Sbjct: 173 ITITGPT----------------------------DCVFRAFTMITFKLEEDLMALVANG 204
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
+T RL++P + G L+GK G I+ +R TGA ++V D LP +T+ V
Sbjct: 205 TVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIRETTGAQVQV-AGDLLP---NSTEREV 260
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKDKP----PSSFP--------QAYGGQNFHSPPAP 340
ISG + + + + T++ ++P K PS P Q + +F S
Sbjct: 261 TISGSQDAIIQCVKLICTVILESPPKGATIPYRPSPTPGTVLLAGNQVFEASDFGS---- 316
Query: 341 MADMHPLGNSSWPARN-------SSLHGMPSTPWMGGYGDQPSRMG----SGSINSCPPG 389
HPL + + + S +G+P + + + G S S PG
Sbjct: 317 ----HPLFSVAQGGVDLQQTYAVQSHYGIPHSELAKLHQLSMQQQGLAPISQSATQVLPG 372
Query: 390 QMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA 449
+ S S ++L IG +IG+ G + +++Q +GA I + + +R + S
Sbjct: 373 GVEANSQTTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQIDSTSDRHVTISG 432
Query: 450 FEGLWNPRSQTIDAILQLQNKTSEFS 475
N I + L+ T++ S
Sbjct: 433 TPIAINLAQYLITSCLETAKSTAQSS 458
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 83/161 (51%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G + ++++L ++G +IGK G VK++++E+ A I++ + ER+I +
Sbjct: 122 GAMGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEG--SCPERIITITGPT 179
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + + A++ TS K +T RL++P+S+ G ++G+GG I
Sbjct: 180 DCVFRAFTMITFKLEEDLMALVANGTVTS----KPPVTLRLVIPASQCGSLIGKGGSKIK 235
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I GS + +I
Sbjct: 236 EIRETTGAQVQVAG------DLLPNSTEREVTISGSQDAII 270
>gi|427796273|gb|JAA63588.1| Putative polyc-binding alphacp-1, partial [Rhipicephalus
pulchellus]
Length = 510
Score = 82.4 bits (202), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 91/364 (25%), Positives = 163/364 (44%), Gaps = 48/364 (13%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQN 189
R++ +++G +IGK G+ +K REE+ AKI ++D GS ER++ + S I K
Sbjct: 77 RLIMQGKEVGSIIGKKGDNIKKFREESGAKINISD---GSCPERIVTVTGSTEAILKA-- 131
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
S K E M +LL + + + L ++ +T RL+VP +
Sbjct: 132 ---FSLIARKFEEML-------SLLCLPVQTVGPTLQELQSNGSHLPKPPVTLRLIVPAS 181
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R TGA+I+V ++ LP +T+ V +SG + +Y++
Sbjct: 182 QCGSLIGKGGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTVSGTAEAITKCIYQIC 237
Query: 310 TLLHQNPRKDK----------PPSSFP--QAYGGQNFHSPPAP-MADMHPLGNSSWPARN 356
++ ++P K PP F QAY Q ++ P P + +H L
Sbjct: 238 CVMMESPPKGATIPYRPKPAMPPVIFAGGQAYTVQGQYAIPHPDLTKLHQL--------- 288
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGS-GSINSCPPG---QMGEVSAEFSMKILCSAGKIGGV 412
+L P P P + + + N+ P ++ + ++ IG +
Sbjct: 289 -ALQHAPLLPGHSVGAINPQALAALATTNNLRPNTAAAAIATASTTTTEMTIPNDLIGCI 347
Query: 413 IGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL-QNKT 471
IGKGG + +++Q +GA+I + ++ S +R + S N I+ ++L +N T
Sbjct: 348 IGKGGSKINEIRQLSGATIKISNSEEGSKDRTVTISGTPEAINLAQYLINTSMELHKNLT 407
Query: 472 SEFS 475
+ S
Sbjct: 408 LDLS 411
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 84/165 (50%), Gaps = 22/165 (13%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP--------TDSDERVIR 446
S +++++ ++G +IGK G N+K+ ++E+GA I++ D T S E +++
Sbjct: 71 SVTLTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINISDGSCPERIVTVTGSTEAILK 130
Query: 447 ASA-----FEGLWNPRS---QTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQG 498
A + FE + + QT+ LQ K +T RL+VP+S+ G ++G+G
Sbjct: 131 AFSLIARKFEEMLSLLCLPVQTVGPTLQELQSNGSHLPKPPVTLRLIVPASQCGSLIGKG 190
Query: 499 GHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
G I E+R T A I+V + P S+E V + G++E +
Sbjct: 191 GSKIKEIREVTGASIQVASEML------PNSTERAVTVSGTAEAI 229
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 105/254 (41%), Gaps = 57/254 (22%)
Query: 118 QSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVAD----------- 165
QS G+ P V R++ P+ + G +IGK G+ +K +RE T A I VA
Sbjct: 161 QSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAV 220
Query: 166 TIPGSEERVI--------IIYSSPTKIAKTQNKDDDS----------AAETKKESMEPH- 206
T+ G+ E + ++ SP K A + + A + + PH
Sbjct: 221 TVSGTAEAITKCIYQICCVMMESPPKGATIPYRPKPAMPPVIFAGGQAYTVQGQYAIPHP 280
Query: 207 -------CAAQDA-LLKVHDR-IIEEDLFGGMASDDD----------NENSTITARLLVP 247
A Q A LL H I +A+ ++ ST T + +P
Sbjct: 281 DLTKLHQLALQHAPLLPGHSVGAINPQALAALATTNNLRPNTAAAAIATASTTTTEMTIP 340
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
N+++GC++GK G I +R +GA I++ ++ + D V ISG P A Y
Sbjct: 341 NDLIGCIIGKGGSKINEIRQLSGATIKISNSEE-----GSKDRTVTISGTPEAINLAQYL 395
Query: 308 VSTL--LHQNPRKD 319
++T LH+N D
Sbjct: 396 INTSMELHKNLTLD 409
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 28/42 (66%)
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
D + T+T RL++ VG ++GK+GD I++ R E+GA I +
Sbjct: 68 DGPSVTLTVRLIMQGKEVGSIIGKKGDNIKKFREESGAKINI 109
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%), Gaps = 7/61 (11%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEH 542
+ +P+ +GCI+G+GG INE+R+ + GA +K+ + GS + V I G+ E
Sbjct: 336 EMTIPNDLIGCIIGKGGSKINEIRQLS-------GATIKISNSEEGSKDRTVTISGTPEA 388
Query: 543 L 543
+
Sbjct: 389 I 389
>gi|334188353|ref|NP_001190526.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|332008916|gb|AED96299.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 198
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 73/140 (52%), Gaps = 24/140 (17%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A T YRILC K GGVIGK+G I+KS+R+ T A I V + +PG ER+I +I+
Sbjct: 66 ATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERII-------EIS 118
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL---FGGMASDDDNE------ 236
+ +D D M AQ+AL VHDRI+E + +GG +++ +
Sbjct: 119 DNRRRDPDG-------RMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRP 171
Query: 237 -NSTITARLLVPNNMVGCLL 255
+ RL+V VGCLL
Sbjct: 172 GGGRVVTRLVVSRMHVGCLL 191
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 56/129 (43%), Gaps = 26/129 (20%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS---- 448
E A + +ILC K GGVIGK G +K ++Q TGA I+V + ER+I S
Sbjct: 63 ETMATTTYRILCHDAKAGGVIGKSGTIIKSIRQHTGAWINVHELVPGDAERIIEISDNRR 122
Query: 449 ------------AFEGLWNPRSQTIDAILQL----------QNKTSEFSEKGTITTRLLV 486
A E L++ + +++ Q ++ G + TRL+V
Sbjct: 123 RDPDGRMPSFSPAQEALFSVHDRILESEAQFGYGGPPPEEEEDYGGVRPGGGRVVTRLVV 182
Query: 487 PSSKVGCIL 495
VGC+L
Sbjct: 183 SRMHVGCLL 191
>gi|302770987|ref|XP_002968912.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
gi|300163417|gb|EFJ30028.1| hypothetical protein SELMODRAFT_409630 [Selaginella moellendorffii]
Length = 393
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 92/198 (46%), Gaps = 54/198 (27%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P K+G +IG+ G VK + EET+++I + D +PG+ ER++++
Sbjct: 46 PGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGVPGTLERIVLV------- 98
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE-------- 236
SA E + ++ P A D LL+VH R+ E S D E
Sbjct: 99 ---------SAKEDPEATISP---AMDGLLRVHRRVTE-------GSSGDGEPVEHIILP 139
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
+ + +RLLV G L+G++ + LP CA+ D MV++ G
Sbjct: 140 SGLVQSRLLVTATQAGSLIGRQ--------------------EELPLCALADDRMVEVQG 179
Query: 297 KPNVAKRALYEVSTLLHQ 314
+ ++A+ V + L +
Sbjct: 180 EILKVQKAMELVVSHLRK 197
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 64/132 (48%), Gaps = 14/132 (10%)
Query: 380 SGSINSCPPGQMGEVS--AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP 437
+GS PPG+ + +++ K+G +IG+ G VK++ +ET + I + D
Sbjct: 29 AGSQEETPPGERKWPGWPGDNVFRLIVPLHKVGAIIGRKGEFVKRMCEETRSRIKILDGV 88
Query: 438 TDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSE------------KGTITTRLL 485
+ ER++ SA E S +D +L++ + +E S G + +RLL
Sbjct: 89 PGTLERIVLVSAKEDPEATISPAMDGLLRVHRRVTEGSSGDGEPVEHIILPSGLVQSRLL 148
Query: 486 VPSSKVGCILGQ 497
V +++ G ++G+
Sbjct: 149 VTATQAGSLIGR 160
>gi|356556240|ref|XP_003546434.1| PREDICTED: KH domain-containing protein At4g18375-like [Glycine
max]
Length = 442
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 80/338 (23%), Positives = 149/338 (44%), Gaps = 55/338 (16%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P K+G +IG+ G ++K + EET+++I V D G+ +R++++
Sbjct: 49 PGDCVFRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLV------- 101
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI---- 240
S E + ++ P A DA++++ R+ G +D +N+ S
Sbjct: 102 ---------SGKEEPEAALSP---AMDAVVRIFKRV-----SGLSETDAENKESAAGLAF 144
Query: 241 -TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ RLLV + L+GK+G +I+ ++ T A++RVL D + A + +V+I G+
Sbjct: 145 CSIRLLVASTQAINLIGKQGSLIKSIQENTSASVRVLSGDEVQSYATVDERIVEIQGEAL 204
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPM----ADMHPLGNSSWPA- 354
+AL V L + F + Y A + +H +S A
Sbjct: 205 KVLKALEAVVGHLRKFLVDHSVLPLFEKTYNASTSQDRQAETWSDKSLLHTTSRTSIFAD 264
Query: 355 -------------RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGE---VSAEF 398
R S L + M YG S G + S G++G +
Sbjct: 265 IPYSTKRDSVLADRESQLDSFLPSSTMSLYGQDSSLSG---VRSSALGRVGAPIVTTVIQ 321
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 436
+M+I S + +IG G N++ +++ +GA + V+++
Sbjct: 322 TMQIPLSYAE--DIIGIQGTNIEYIRRTSGAILTVQES 357
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/198 (24%), Positives = 94/198 (47%), Gaps = 19/198 (9%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ GK+G +IG+ G +K++ +ET + I V DAP + +R++ S E S
Sbjct: 54 FRLIVPVGKVGSIIGRKGELIKKMCEETRSRIRVLDAPLGTPDRIVLVSGKEEPEAALSP 113
Query: 460 TIDAILQLQNKTSEFSEKGT-----------ITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+DA++++ + S SE + RLLV S++ ++G+ G +I ++
Sbjct: 114 AMDAVVRIFKRVSGLSETDAENKESAAGLAFCSIRLLVASTQAINLIGKQGSLIKSIQEN 173
Query: 509 TQADIRVV-GARVKLQDPHPGSSECIVDIRGSSEHLISAH----GTYQSFMTSGQSMKVQ 563
T A +RV+ G V+ + E IV+I+G + ++ A G + F+ + +
Sbjct: 174 TSASVRVLSGDEVQ---SYATVDERIVEIQGEALKVLKALEAVVGHLRKFLVDHSVLPLF 230
Query: 564 PSSYQNINPQQSSCQTMS 581
+Y Q +T S
Sbjct: 231 EKTYNASTSQDRQAETWS 248
>gi|410897014|ref|XP_003961994.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Takifugu rubripes]
Length = 607
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 106/473 (22%), Positives = 197/473 (41%), Gaps = 72/473 (15%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIY 178
FG + RI+ P++ +G +IGK G +K++ ++TQ+K+ + G+ E+ I I+
Sbjct: 189 FGAPRTTQQDLRIIVPTQYVGAIIGKEGLTIKNVTKQTQSKVDIHRKENAGAAEKPITIH 248
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
S+P C+A ++ I++++ A +D
Sbjct: 249 STPEG-----------------------CSAACRMIM---EIMQKEANETKAMED----- 277
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
I +++ NN +G L+GK+G ++++ ETG I + L N + + + G
Sbjct: 278 -IPLKIIASNNYIGRLIGKQGRNLKKIEEETGTKITISSLQDL--NIYNNERTITVKGSL 334
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG--NSSWPARN 356
A E+ L + ++ N + P +++ LG +S+ P +
Sbjct: 335 EACCNAEVEIMKKLRE---------AYENDIAAINQQTSLIPGLNLNALGIFSSTLPVLS 385
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINS---CPPG-----QMGEVSAEFSMKILCSAGK 408
+ + P +G G P S ++S PP Q E + +
Sbjct: 386 PAAGPRSTMPPVGPAGYNPFLGHSSHLSSLYGVPPASAIPHQHAAQEQEVAY-LFIPTQA 444
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVEDA--PTDSDERVIRASAFEGLWNPRSQTIDAILQ 466
+G +IGK G ++KQL GASI V A P ++ VI E + + + + +
Sbjct: 445 VGALIGKKGQHIKQLAHFAGASIKVAPAEMPDATERMVIITGTPEAQFKAQGRIFGKLKE 504
Query: 467 LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPH 526
T + E+ + T + VPS+ G ++G+GG +NE++ T A++ V +D
Sbjct: 505 ENIFTGK--EEVRLETHIKVPSTAAGRVIGKGGKTVNELQSLTSAEVIVP------RDQT 556
Query: 527 PGS-SECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQN---INPQQS 575
P +E +V I G H + + Q +K Q +Q ++PQ S
Sbjct: 557 PDEKNEVVVKICG---HFFANQTAQRKIREIIQQVKQQEQKHQQGAAVSPQHS 606
>gi|440901500|gb|ELR52431.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Bos grunniens
mutus]
Length = 600
Score = 82.0 bits (201), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 101/424 (23%), Positives = 177/424 (41%), Gaps = 87/424 (20%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G S + P Q + S ++ + A +
Sbjct: 375 -LFPPTS----GMP-----------PPTSGPPSAITPPYPQFEQQSETETVHLFIPALSV 418
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 419 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 473
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHV-------------INEMRRRTQA 511
K E + E+ + + VPS G ++G+GG +NE++ + A
Sbjct: 474 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTAIPLNVISVYLLQVNELQNLSSA 533
Query: 512 DIRV 515
++ V
Sbjct: 534 EVVV 537
>gi|327267261|ref|XP_003218421.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Anolis carolinensis]
Length = 576
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 98/411 (23%), Positives = 170/411 (41%), Gaps = 70/411 (17%)
Query: 113 NSSREQS---FGNSQPA--DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQP D RIL P++ +G +IGK G +K+L ++TQ+K+ +
Sbjct: 173 HSSREQGPSPGGSSQPKQLDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKE 232
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ I I+++P +A + D + +E
Sbjct: 233 NAGAAEKPITIHATPE-------------------------GCSEACRMILDIMQKE--- 264
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+++ I ++L N++VG L+GK G ++++ +TG I + P L
Sbjct: 265 ----AEETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDL--TIY 318
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + D + ++
Sbjct: 319 NPERTITVKGSIEACSNAEAEIMNKLREAYEND---------------------IVTVNQ 357
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
N P N + G+ ST G PS G P V + + +
Sbjct: 358 QANL-IPGLNLNALGIFST----GLSMLPSGTGVRRPAVSTPYNPFAVPEQEVVNLFIPT 412
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQ 466
+G +IGK G ++KQL + GASI + AP +S E R G + + I
Sbjct: 413 QAVGAIIGKKGQHIKQLARFAGASIKI--APAESPEASERMVIITGPPEAQFKAQGRIFG 470
Query: 467 LQNKTSEFS--EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ + F+ E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 471 KLKEENFFNPKEEVKLEAHIKVPSSAAGRVIGKGGKTVNELQNLTSAEVIV 521
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 80/188 (42%), Gaps = 38/188 (20%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT-IPGSEERVIIIYSSPTK 183
P V + P++ +G +IGK G +K L A I +A P + ER++II P
Sbjct: 401 PEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAESPEASERMVIITGPPEA 460
Query: 184 IAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR 243
K Q + + ++ EE+ F + E + A
Sbjct: 461 QFKAQGR-------------------------IFGKLKEENFF------NPKEEVKLEAH 489
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---KPNV 300
+ VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 490 IKVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVVVKIIGHFFASQT 546
Query: 301 AKRALYEV 308
A+R + E+
Sbjct: 547 AQRKIREI 554
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 71/148 (47%), Gaps = 11/148 (7%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQL--QQETGASIHVEDAPTDSDERVIRASAFEGLW 454
+F ++IL +G +IGK G +K L Q ++ IH ++ +++ + + EG
Sbjct: 192 DFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKENAGAAEKPITIHATPEGC- 250
Query: 455 NPRSQTIDAILQLQNKTSEFSEKG-TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
S+ IL + K +E ++ I ++L +S VG ++G+ G + ++ + T I
Sbjct: 251 ---SEACRMILDIMQKEAEETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKI 307
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSE 541
+ LQD + E + ++GS E
Sbjct: 308 TI----SPLQDLTIYNPERTITVKGSIE 331
>gi|47222225|emb|CAG11104.1| unnamed protein product [Tetraodon nigroviridis]
Length = 580
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 91/403 (22%), Positives = 162/403 (40%), Gaps = 62/403 (15%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKI 184
+D R+L P++ +G +IGK G+ +++L ++T +KI + G+ E+ I I+S+P
Sbjct: 165 SDIPLRMLVPTQFVGAIIGKQGDTIRNLTKQTHSKIDIHRKENAGAAEKPITIHSTPE-- 222
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
+ +A + D + +E + D I ++
Sbjct: 223 -----------------------GSSNACRTIMDIMQKEAI-------DTKFTEEIPLKI 252
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LV NN VG L+GK G ++++ +TG I + L N + + + G RA
Sbjct: 253 LVHNNFVGRLIGKEGRNLKKIEQDTGTKITISSLQDL--TLYNPERTITVKGSIEACGRA 310
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN--SSWPARNSSLHGM 362
EV + + D N S P +++ LG S P S+ +
Sbjct: 311 EEEVMKKIREAYESD---------VAAMNLQSNLIPGLNLNALGLFPSGSPGMGPSMSSV 361
Query: 363 PSTPWMGG--YGDQPSRMGS---GSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
P GG +G P + S+ S + ++ + +G +IGK G
Sbjct: 362 PPPGAHGGCSFGCSPYGVEGPLWASMMSASGQTLAGSPESETVHLFIPTLAVGAIIGKQG 421
Query: 418 FNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-- 475
++KQL GASI D R++ + P A ++ K E +
Sbjct: 422 QHIKQLSHFAGASIKASRKGMDPKHRMVI------IVGPPEAQFKAQCRIFGKLKEENFF 475
Query: 476 ---EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + + VPS G ++G+GG +NE++ T A++ V
Sbjct: 476 GPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEVVV 518
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 76/180 (42%), Gaps = 35/180 (19%)
Query: 105 GIKKGNWSN--SSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKIT 162
G++ W++ S+ Q+ S ++TV+ + P+ +G +IGK G +K L A I
Sbjct: 378 GVEGPLWASMMSASGQTLAGSPESETVH-LFIPTLAVGAIIGKQGQHIKQLSHFAGASIK 436
Query: 163 VADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIE 222
+ + R++II P K Q ++ ++ E
Sbjct: 437 ASRKGMDPKHRMVIIVGPPEAQFKAQ-------------------------CRIFGKLKE 471
Query: 223 EDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
E+ FG E + A + VP+ G ++GK G + L++ T A + V+P D+ P
Sbjct: 472 ENFFG------PKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEV-VVPRDQTP 524
>gi|15236094|ref|NP_194330.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
gi|4538929|emb|CAB39665.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|7269451|emb|CAB79455.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|15810499|gb|AAL07137.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|20466386|gb|AAM20510.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|21280915|gb|AAM45112.1| putative nucleic acid binding protein [Arabidopsis thaliana]
gi|332659742|gb|AEE85142.1| RNA-binding KH domain-containing protein [Arabidopsis thaliana]
Length = 495
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 93/186 (50%), Gaps = 30/186 (16%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P K+G +IG+ G+ +K + EET+A+I V D + +R+++I
Sbjct: 71 PGDCVFRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLI------- 123
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI---- 240
S E + M P A DA+L+V R+ G+ +DD++
Sbjct: 124 ---------SGKEEPEAYMSP---AMDAVLRVFRRV------SGLPDNDDDDVQNAGSVF 165
Query: 241 -TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ RLLV + L+GK+G +I+ + +GA++R+L + P A + +V + G+
Sbjct: 166 SSVRLLVASTQAINLIGKQGSLIKSIVENSGASVRILSEEETPFYAAQDERIVDLQGEAL 225
Query: 300 VAKRAL 305
+AL
Sbjct: 226 KILKAL 231
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G +K++ +ET A I V D P ++ +R++ S E S
Sbjct: 76 FRMIVPVTKVGAIIGRKGDFIKKMCEETRARIKVLDGPVNTPDRIVLISGKEEPEAYMSP 135
Query: 460 TIDAILQL--------QNKTSEFSEKGTI--TTRLLVPSSKVGCILGQGGHVINEMRRRT 509
+DA+L++ N + G++ + RLLV S++ ++G+ G +I + +
Sbjct: 136 AMDAVLRVFRRVSGLPDNDDDDVQNAGSVFSSVRLLVASTQAINLIGKQGSLIKSIVENS 195
Query: 510 QADIRVVGARVKLQDP-HPGSSECIVDIRGSSEHLISA 546
A +R++ + P + E IVD++G + ++ A
Sbjct: 196 GASVRILSEE---ETPFYAAQDERIVDLQGEALKILKA 230
>gi|281353861|gb|EFB29445.1| hypothetical protein PANDA_010268 [Ailuropoda melanoleuca]
Length = 596
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 100/395 (25%), Positives = 168/395 (42%), Gaps = 75/395 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ + A +
Sbjct: 375 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSV 417
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 472
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGG 499
K E + E+ + + VPS G ++G+GG
Sbjct: 473 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGG 507
>gi|226502036|ref|NP_001148766.1| nucleic acid binding protein [Zea mays]
gi|195621990|gb|ACG32825.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D+V+R++ P K+G +IG+ G ++K L E T+A++ + + G+ ER++++
Sbjct: 37 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLV------- 89
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
S E + P A DAL++V R+I + ARL
Sbjct: 90 ---------SGKEDPGLELSP---AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARL 137
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD--RLPPCAMNTDEMVQISGKPNVAK 302
LVP L+GK+G I+ ++ TGA IRV+ D P + + +V+I G
Sbjct: 138 LVPGAQAINLIGKQGATIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVL 197
Query: 303 RALYEVSTLLHQ 314
+AL VS L +
Sbjct: 198 KALQAVSNHLRK 209
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G +K+L + T A + + + P + ER++ S E S
Sbjct: 42 FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELSP 101
Query: 460 TIDAILQLQNK-----------TSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+DA++++ + T + G RLLVP ++ ++G+ G I ++
Sbjct: 102 AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQES 161
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
T A IRV+ + + E IV+I+G +E ++ A
Sbjct: 162 TGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKA 199
>gi|413955216|gb|AFW87865.1| nucleic acid binding protein [Zea mays]
Length = 441
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D+V+R++ P K+G +IG+ G ++K L E T+A++ + + G+ ER++++
Sbjct: 37 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLV------- 89
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
S E + P A DAL++V R+I + ARL
Sbjct: 90 ---------SGKEDPGLELSP---AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARL 137
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD--RLPPCAMNTDEMVQISGKPNVAK 302
LVP L+GK+G I+ ++ TGA IRV+ D P + + +V+I G
Sbjct: 138 LVPGAQAINLIGKQGATIKAIQESTGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVL 197
Query: 303 RALYEVSTLLHQ 314
+AL VS L +
Sbjct: 198 KALQAVSNHLRK 209
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 76/158 (48%), Gaps = 11/158 (6%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G +K+L + T A + + + P + ER++ S E S
Sbjct: 42 FRLVVPVLKVGSIIGRKGELIKRLVEGTKARVRILEGPVGATERIVLVSGKEDPGLELSP 101
Query: 460 TIDAILQLQNK-----------TSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+DA++++ + T + G RLLVP ++ ++G+ G I ++
Sbjct: 102 AMDALMRVFKRVIGITDGAAEGTQAAATPGVCAARLLVPGAQAINLIGKQGATIKAIQES 161
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
T A IRV+ + + E IV+I+G +E ++ A
Sbjct: 162 TGATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKA 199
>gi|395839825|ref|XP_003792776.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Otolemur garnettii]
Length = 597
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 105/434 (24%), Positives = 173/434 (39%), Gaps = 95/434 (21%)
Query: 113 NSSREQSFGNSQPA---DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIP 168
+SSREQ G S A D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS 233
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
G+ E+ + I+++P E C R+I E +
Sbjct: 234 GAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM--Q 261
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+D+ I ++L N +VG L+GK G ++++ ETG I + L N
Sbjct: 262 KEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNP 319
Query: 289 DEMVQISGKPNVAKRALYEV---------STLLHQNPRKDKPPSSFPQAYG----GQNFH 335
+ + + G A E+ + +L N + + P A G G +
Sbjct: 320 ERTITVKGTVEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVL 379
Query: 336 SPPA------PMADMHPLGNSSWPARNSSL---HGMPSTPWMGGYGDQPSRMGSGSINSC 386
PP+ P A HP S SSL H P Y +Q +N
Sbjct: 380 PPPSGPRGAPPAAPYHPFATHS--GYFSSLYPHHQFSPFPHHHSYPEQEI------VNLF 431
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERV 444
P Q +G +IGK G ++KQL + GASI + + P S+ V
Sbjct: 432 IPTQA-----------------VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMV 474
Query: 445 IRASAFEGLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHV 501
I E + + + + K F E+ + + VPSS G ++G+GG
Sbjct: 475 IITGPPEAQFKAQGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKT 529
Query: 502 INEMRRRTQADIRV 515
+NE++ T A++ V
Sbjct: 530 VNELQNLTSAEVIV 543
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 420 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 479
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 480 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 508
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 509 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 565
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 566 SQTAQRKIREI 576
>gi|395839829|ref|XP_003792778.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Otolemur garnettii]
Length = 575
Score = 81.3 bits (199), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/412 (22%), Positives = 168/412 (40%), Gaps = 73/412 (17%)
Query: 113 NSSREQSFGNSQPA---DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIP 168
+SSREQ G S A D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS 233
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
G+ E+ + I+++P E A +L++ +
Sbjct: 234 GAAEKPVTIHATP----------------------EGTSEACRMILEIMQK--------- 262
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+D+ I ++L N +VG L+GK G ++++ ETG I + L N
Sbjct: 263 -EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNP 319
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG 348
+ + + G A E+ L + +F N + P ++ LG
Sbjct: 320 ERTITVKGTVEACANAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSALG 370
Query: 349 NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGK 408
S + L +P P G G P+ P + + + +
Sbjct: 371 IFS-----TGLSVLP--PPSGPRGAPPA---------APYHPFAQYPEQEIVNLFIPTQA 414
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAILQ 466
+G +IGK G ++KQL + GASI + + P S+ VI E + + + +
Sbjct: 415 VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKL-- 472
Query: 467 LQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 473 ---KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 521
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 38/188 (20%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSSPTK 183
P + + P++ +G +IGK G +K L A I +A P ER++II P
Sbjct: 401 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 460
Query: 184 IAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR 243
K Q + + ++ EE+ F + E + A
Sbjct: 461 QFKAQGR-------------------------IFGKLKEENFF------NPKEEVKLEAH 489
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---KPNV 300
+ VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 490 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQT 546
Query: 301 AKRALYEV 308
A+R + E+
Sbjct: 547 AQRKIREI 554
>gi|255554418|ref|XP_002518248.1| Poly(rC)-binding protein, putative [Ricinus communis]
gi|223542595|gb|EEF44134.1| Poly(rC)-binding protein, putative [Ricinus communis]
Length = 451
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 53/183 (28%), Positives = 94/183 (51%), Gaps = 24/183 (13%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P K+G +IG+ G+++K + +ET+A+I V D G+ +RV++I
Sbjct: 58 PGDCVFRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLI------- 110
Query: 185 AKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA- 242
+ KE +E P A DA+++V R+ L G A + ++
Sbjct: 111 -------------SGKEDVEAPLSPAMDAVIRVFKRV--SGLPEGNAQELGAAGIAFSSI 155
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
RLLV + L+GK+G +I+ ++ TGA++RVL + +P + +V + G+
Sbjct: 156 RLLVASTQAINLIGKQGSIIKSIQESTGASVRVLSENEVPFYVATDERIVDLQGEAMKVL 215
Query: 303 RAL 305
AL
Sbjct: 216 EAL 218
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/261 (22%), Positives = 120/261 (45%), Gaps = 20/261 (7%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G +K++ ET A I V DAP + +RV+ S E + P S
Sbjct: 63 FRLIVPVLKVGSIIGRKGDLIKKMCDETRARIRVLDAPIGTPDRVVLISGKEDVEAPLSP 122
Query: 460 TIDAILQLQNKTS--------EFSEKGTI--TTRLLVPSSKVGCILGQGGHVINEMRRRT 509
+DA++++ + S E G + RLLV S++ ++G+ G +I ++ T
Sbjct: 123 AMDAVIRVFKRVSGLPEGNAQELGAAGIAFSSIRLLVASTQAINLIGKQGSIIKSIQEST 182
Query: 510 QADIRVVGARVKLQDP-HPGSSECIVDIRGSSEHLISAH----GTYQSFMTSGQSMKVQP 564
A +RV+ + P + + E IVD++G + ++ A G + F+ + +
Sbjct: 183 GASVRVLSEN---EVPFYVATDERIVDLQGEAMKVLEALEAIVGHLRKFLVDHSVLPLFE 239
Query: 565 SSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSP--YQNINPQQSSYPMHTH 622
+Y + +T S S + + + ++ ++ + P +S P+
Sbjct: 240 KNYNALISLDRQAETWSDRSSFHTTSQGRIDIDYPLSGKRDALLLERETPFESQVPLSRI 299
Query: 623 QGAGTNPHITPTQSSYYSSSA 643
G +P I+ +SS ++ S+
Sbjct: 300 SLYGQDPAISSVRSSVFNRSS 320
>gi|224115590|ref|XP_002332094.1| predicted protein [Populus trichocarpa]
gi|222874914|gb|EEF12045.1| predicted protein [Populus trichocarpa]
Length = 460
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 24/189 (12%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D V+R++ P K+G +IG+ G +VK + +ET+A+I + + G +R+++I
Sbjct: 50 PGDNVFRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISG----- 104
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRII-----EEDLFGGMASDDDNENST 239
K+E P A DA+L+V R+ E D G A+ ++
Sbjct: 105 --------------KEEPEAPLSPAMDAVLRVFKRVSGLSPGEGDNTGSAAAAAAAGSAF 150
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ RLLV ++ L+GK+G +I+ ++ TG +RV+ D +P A + + +V+I G+
Sbjct: 151 CSIRLLVASSQAINLIGKQGSIIKSIQENTGVVVRVMAEDDIPTYATSDERIVEIHGEAM 210
Query: 300 VAKRALYEV 308
+AL V
Sbjct: 211 KVFKALEAV 219
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 75/166 (45%), Gaps = 24/166 (14%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G VK++ ET A I + + P +R++ S E P S
Sbjct: 55 FRLIVPVSKVGSIIGRKGELVKKMCDETRARIRILEGPLGITDRIVLISGKEEPEAPLSP 114
Query: 460 TIDAILQLQNKTSEFS----------------EKGTITTRLLVPSSKVGCILGQGGHVIN 503
+DA+L++ + S S + RLLV SS+ ++G+ G +I
Sbjct: 115 AMDAVLRVFKRVSGLSPGEGDNTGSAAAAAAAGSAFCSIRLLVASSQAINLIGKQGSIIK 174
Query: 504 EMRRRTQADIRVVGARVKLQDPHP---GSSECIVDIRGSSEHLISA 546
++ T +RV+ +D P S E IV+I G + + A
Sbjct: 175 SIQENTGVVVRVMA-----EDDIPTYATSDERIVEIHGEAMKVFKA 215
>gi|348522861|ref|XP_003448942.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Oreochromis niloticus]
Length = 588
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 91/399 (22%), Positives = 166/399 (41%), Gaps = 75/399 (18%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKI 184
+D R+L P++ +G +IGK G ++++ ++T +KI + G+ E+ I I+S+P
Sbjct: 193 SDIPLRMLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITIHSTPD-- 250
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
+A + D + +E L D I ++
Sbjct: 251 -----------------------GCSNACKTIMDIMQKEAL-------DTKFTEEIPLKI 280
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L N+ VG L+GK G ++++ ETG I + P L N + + + G +A
Sbjct: 281 LAHNSFVGRLIGKEGRNLKKIEQETGTKITISPLQDL--TLYNPERTITVKGSIEACAKA 338
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG--NSSWPARNSSLHGM 362
EV + + S+ N S P +++ LG ++ P S+ +
Sbjct: 339 EEEVMKKIRE---------SYESDMAAMNLQSNLIPGLNLNALGLFPTTAPGMGPSMSSI 389
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
TP G +G GS S P + ++ + A +G +IGK G ++KQ
Sbjct: 390 --TPP-GAHG------GSSSFGGHPESE--------TVHLFIPALAVGAIIGKQGQHIKQ 432
Query: 423 LQQETGASIHVEDAP-TDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----E 476
L GASI + A D+ +R++ + P A ++ K E + E
Sbjct: 433 LSHFAGASIKIAPAEGMDAKQRMVI------IVGPPEAQFKAQCRIFGKLKEENFFGPKE 486
Query: 477 KGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ + + VP+ G ++G+GG +NE++ T A++ V
Sbjct: 487 EVKLEAHIKVPAFAAGRVIGKGGKTVNELQNLTCAEVVV 525
>gi|148223980|ref|NP_001082843.1| uncharacterized protein LOC557028 [Danio rerio]
gi|94732695|emb|CAK10813.1| novel protein similar to human IGF-II mRNA-binding protein 2
(IMP-2) [Danio rerio]
gi|167614340|gb|ABZ89742.1| IGF-II mRNA-binding protein 2b variant 1 [Danio rerio]
gi|167614342|gb|ABZ89743.1| IGF-II mRNA-binding protein 2b variant 2 [Danio rerio]
Length = 436
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 104/427 (24%), Positives = 183/427 (42%), Gaps = 77/427 (18%)
Query: 115 SREQSFGNSQPA-------------DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKI 161
SREQ FG QP + RIL P++ +G +IGK G +K++ ++TQ+K+
Sbjct: 5 SREQEFG--QPGAMGGPQGPRQRQQELPLRILVPTQFVGAIIGKEGLTIKNITKQTQSKV 62
Query: 162 TV-ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI 220
+ G+ E+ I I+SS KE C +L++ ++
Sbjct: 63 DIHRKENAGATEKAITIHSS-------------------KEGCSQAC---RMILEIMEK- 99
Query: 221 IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
++D + ++L N++VG L+GK G ++++ +TG I +
Sbjct: 100 ---------EANDTKIVEEVPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISALQD 150
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQ---AYGGQNFHSP 337
L N + + + G +A E+ L + D +S Q G N +
Sbjct: 151 L--TVYNQERTISVRGGVEECCKAEGEIMKKLREAHEND--VASVNQQTNMMAGLNLSAL 206
Query: 338 PAPMADMHPL-------GNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQ 390
+ M L G+ S PA S L G PS MGG PS SG+++ G
Sbjct: 207 GIFSSGMSVLPPASGLRGSLSTPANYSPLLG-PS--IMGGLYGVPS---SGALSLQQAGG 260
Query: 391 MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRAS 448
EV + + +G +IGK G ++K+L GASI + ++P + + VI
Sbjct: 261 EQEV-----VYLFIPTPAVGALIGKKGQHIKELAHFAGASIKIAAPESPDEPERMVIITG 315
Query: 449 AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
E + + + + + T++ E+ + + VPS+ G ++G+GG +NE++
Sbjct: 316 PPEAQFKAQGRIYGKLKEENFFTAK--EEVKLEAHIKVPSTAAGRVIGKGGKTVNELQNL 373
Query: 509 TQADIRV 515
T A++ V
Sbjct: 374 TSAEVIV 380
>gi|313240346|emb|CBY32688.1| unnamed protein product [Oikopleura dioica]
Length = 568
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 92/408 (22%), Positives = 172/408 (42%), Gaps = 79/408 (19%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLRE--ETQAKITVADTIPGSEERVIII 177
FG DT ++L P+ +G +IGK G+ V+ + + +++A++ V ++V I
Sbjct: 186 FGARGSPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSDKVATI 245
Query: 178 YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN 237
Y +P C A A +++ + + +E+ DNE
Sbjct: 246 YGAPEA-----------------------CGA--AAIRILEIVRKEE--------KDNE- 271
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
+ ++L N ++G L+G+ G ++ ++ +TG I + L P N D + I G+
Sbjct: 272 --LPLKVLAHNALIGRLIGRDGRNLKHVQDKTGTRIAISSMHELSP--YNMDRTISIHGE 327
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQN---------FHSPPAPMADMHPLG 348
A +++ L Q D S Y G N SP AP
Sbjct: 328 VKGISEAEQQITEKLRQF-ETDMAAMSQQSLYPGLNSQQMQMFPGLQSPTAP-------- 378
Query: 349 NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGK 408
PA N S G + + G+ S N+ + ++ +L +G
Sbjct: 379 ----PAYNVSYQG---SYFFKNVSQSVFFSGNSSSNNT----------QETVTLLIPSGA 421
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVE-DAPTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
+G +IG G +++ + + GASI + +A D+ RV E W + D +L
Sbjct: 422 VGAIIGSRGTHIRNISRIAGASIRIHVNADRDAKARVTIVGVPESQWKAQFCIFD---KL 478
Query: 468 QNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ + +E+G +TT++ +P VG I+G+GG + E++R T +++ +
Sbjct: 479 KQEGWFGNEEGRLTTQITIPGKLVGRIIGKGGVNVRELQRITSSEVTI 526
>gi|392884376|gb|AFM91020.1| poly(rC) binding protein 3, isoform CRAb [Callorhinchus milii]
Length = 349
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/380 (24%), Positives = 157/380 (41%), Gaps = 77/380 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +R E+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMRVESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M + +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGMPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHG 361
+ ++ ++P K +P P+S P + G ++ A HP A +
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASAPVIFAGGQAYTIQGQYAIPHPDDACLLSAEYKT--A 219
Query: 362 MPSTPWMGGYGDQPSRM------------GSGSINSCPPGQMGEVSAEFSM--------- 400
+ ST W PS G + +C E S + M
Sbjct: 220 LTSTLWRSPQLAHPSSQLKEAAWRPESLRGKMELKNC-----NEESENWGMDANPQASTH 274
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQT 460
++ IG +IG+ G + +++Q +GA I + +A S ER I + +P + +
Sbjct: 275 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTERQITITG-----SPANIS 329
Query: 461 IDAILQLQNKTSEFSEKGTI 480
+ L TSE S G+I
Sbjct: 330 LAQYLINARLTSEVSGMGSI 349
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 80/163 (49%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK+++ E+GA I++ + + ER++ +
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEG--NCPERIVTITG-- 63
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 64 ----PTDAIFKAFAMIAFKFEEDINNSMTNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGMPDAII 156
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K N+S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAFKFEEDINNSMTNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I P I
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGMPDAI 155
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 54/112 (48%), Gaps = 15/112 (13%)
Query: 451 EGLWNPRSQTIDAILQLQNKTSEFSEKG------TITTRLLVPSSKVGCILGQGGHVINE 504
E W P S + ++L+N E G T L +P+ +GCI+G+ G INE
Sbjct: 239 EAAWRPES--LRGKMELKNCNEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINE 296
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS 556
+R+ + GA++K+ + GS+E + I GS ++ A + +TS
Sbjct: 297 IRQMS-------GAQIKIANATEGSTERQITITGSPANISLAQYLINARLTS 341
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 39/76 (51%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEE 172
N E ++ P + + + P+ IG +IG+ G + +R+ + A+I +A+ GS E
Sbjct: 257 NEESENWGMDANPQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATEGSTE 316
Query: 173 RVIIIYSSPTKIAKTQ 188
R I I SP I+ Q
Sbjct: 317 RQITITGSPANISLAQ 332
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 49/97 (50%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMRVESGARINISEGN----CP---ERIVTITG 63
Query: 297 KPNVAKRALY--------EVSTLLHQNPRKDKPPSSF 325
+ +A +++ + +P KPP +
Sbjct: 64 PTDAIFKAFAMIAFKFEEDINNSMTNSPATSKPPVTL 100
>gi|413944062|gb|AFW76711.1| hypothetical protein ZEAMMB73_249479 [Zea mays]
Length = 426
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 120/252 (47%), Gaps = 27/252 (10%)
Query: 209 AQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV--IQRLR 266
AQ+A+L + I++ + D DN IT RLLVP + + C G+ G + IQR
Sbjct: 163 AQEAVLHIQTHIVD------LGPDMDN---IITTRLLVPASEIACFDGREGSLSDIQR-- 211
Query: 267 SETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFP 326
+T AN+++LP + LP CA+ +DE++QI G+ A+ AL +V+T L ++ P P
Sbjct: 212 -QTSANVQILPREDLPSCALESDELIQIVGEIKAARNALIQVTTKLRSFLYREMPD---P 267
Query: 327 QAYGGQNFHSPPAPMA---------DMHPLGNSSWPAR-NSSLHGMPSTPWMGGYGDQPS 376
G N H +P+A + P+G ++ +S H S G +Q S
Sbjct: 268 IQVGNINLHGAISPVAGSPRGPYQGNDIPMGAYHQASQLATSWHSKDSGGSASGSFEQGS 327
Query: 377 RMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 436
+ S + +++I+ + + + G + Q+ + +GA++ + +
Sbjct: 328 NINDDIRQSATKRFAVPLVTRSTLEIVIPNSAVASLTMRAGSKLAQISEISGAAVTLAED 387
Query: 437 PTDSDERVIRAS 448
+D ++V+R S
Sbjct: 388 RSDILQKVVRIS 399
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 67/145 (46%), Gaps = 10/145 (6%)
Query: 462 DAILQLQNKTSEF--SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGAR 519
+A+L +Q + ITTRLLVP+S++ C G+ G +++++R+T A+++++ R
Sbjct: 165 EAVLHIQTHIVDLGPDMDNIITTRLLVPASEIACFDGREGS-LSDIQRQTSANVQIL-PR 222
Query: 520 VKLQDPHPGSSECIV---DIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQNINPQQSS 576
L S E I +I+ + LI +SF+ +Q NIN +
Sbjct: 223 EDLPSCALESDELIQIVGEIKAARNALIQVTTKLRSFLYREMPDPIQ---VGNINLHGAI 279
Query: 577 CQTMSSHQSSYQNMNTQQSPYHRVN 601
S + YQ + YH+ +
Sbjct: 280 SPVAGSPRGPYQGNDIPMGAYHQAS 304
>gi|326934067|ref|XP_003213117.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Meleagris gallopavo]
Length = 553
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 169/398 (42%), Gaps = 73/398 (18%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPT 182
QP D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I I+S+P
Sbjct: 169 QPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTP- 227
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
E AA +L++ + + D +
Sbjct: 228 ---------------------EGCSAACKMILEIMQK----------EAKDTKTADEVPL 256
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 257 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGSIENCC 314
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
+A E+ + + ++ + S P ++ +G +PA ++++
Sbjct: 315 KAEQEIMKKVRE---------AYENDVAAMSLQSHLIPGLNLAAVG--LFPASSNAVPPP 363
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS+ + G S M PP Q ++ + A +G +IGK G ++KQ
Sbjct: 364 PSS--VSGAAPYSSFM--------PPEQE-------TVHVFIPAQAVGAIIGKKGQHIKQ 406
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EK 477
L + ASI + AP ++ + +R G P A ++ K E + E+
Sbjct: 407 LSRFASASIKI--APPETPDSKVRMVVITG---PPEAQFKAQGRIYGKLKEENFFGPKEE 461
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 462 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 499
>gi|426217760|ref|XP_004003120.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Ovis aries]
Length = 599
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 102/422 (24%), Positives = 173/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 320 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAANQQANLIPGLNLSA 370
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINS-CPPGQMGEVSAEFS----- 399
LG S+ + G P Y P SG +S CPP Q G S
Sbjct: 371 LGIFSTGLSVLPPPAGPRGAPPAPPY--HPFATHSGYFSSLCPPHQFGPFPHHHSYPEQE 428
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 429 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 488
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 489 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 543
Query: 514 RV 515
V
Sbjct: 544 IV 545
>gi|410900550|ref|XP_003963759.1| PREDICTED: poly(rC)-binding protein 3-like [Takifugu rubripes]
Length = 434
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 89/373 (23%), Positives = 152/373 (40%), Gaps = 56/373 (15%)
Query: 116 REQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVI 175
E S S R+L +++G +IGK G VK +REE+ A+I +++ S ER++
Sbjct: 5 EEMSSDGSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIV 62
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASD 232
I A +A+ + I EED+ M++
Sbjct: 63 TI-----------------------------TGATEAIFRAFAMIAQKFEEDISAAMSNS 93
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
+T RL+ P + G L+GK G I+ +R TGA ++V D LP +T+ V
Sbjct: 94 SVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVA-GDMLPD---STERAV 149
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPL---GN 349
ISG P + + + +++ ++P K P+A H+ AP H G
Sbjct: 150 TISGTPQAITQCVRHICSVMLESPPKGATIPYRPKAV-TVGVHAVLAPQQSAHAFAIPGQ 208
Query: 350 SSWPARN-SSLH--GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
++ ++ + LH M P PS G N PG + + S ++
Sbjct: 209 YTFAHQDLTKLHQLAMQHIPL-------PSL---GQSNPTFPG-LDPSAPTSSQEMAIPN 257
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQ 466
IG +IG+ G + +++Q +GA I + S R + + N I+A L+
Sbjct: 258 DFIGCIIGRQGSKINEIRQVSGAHIKIASTTDGSAVRQVTITGSPASINVAQYLINASLE 317
Query: 467 LQNKTSEFSEKGT 479
+ T + + T
Sbjct: 318 MAKYTMQAASSAT 330
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AF 450
G ++ ++++L ++G +IGK G VK++++E+GA I++ + S ER++ + A
Sbjct: 11 GSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTITGAT 68
Query: 451 EGLWNP---RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
E ++ +Q + + S + K +T RL+ P S+ G ++G+GG I E+R
Sbjct: 69 EAIFRAFAMIAQKFEEDISAAMSNSSVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRE 128
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
T A ++V G D P S+E V I G+ + +
Sbjct: 129 TTGAQVQVAG------DMLPDSTERAVTISGTPQAI 158
>gi|326925691|ref|XP_003209044.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Meleagris gallopavo]
Length = 502
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 95/413 (23%), Positives = 171/413 (41%), Gaps = 75/413 (18%)
Query: 113 NSSREQ--SFGNSQPA--DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTI 167
++SREQ S G SQP D R+L P++ +G +IGK G +K+L ++TQ+K+ +
Sbjct: 100 HASREQGSSPGGSQPKQLDFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKEN 159
Query: 168 PGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
G+ E+ I I+++P +A + D + +E
Sbjct: 160 AGAAEKPITIHATPE-------------------------GCSEACRMILDIMQKE---- 190
Query: 228 GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMN 287
+D+ I ++L N++VG L+GK G ++++ +TG I + P L N
Sbjct: 191 ---ADETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDL--TIYN 245
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPL 347
+ + + G A E+ L + D + ++
Sbjct: 246 PERTITVKGSTEACSNAEVEIMKKLREAYEND---------------------IVAVNQQ 284
Query: 348 GNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAG 407
N P N S G+ ST G PS +G+ + P + + + +
Sbjct: 285 ANL-IPGLNLSALGIFST----GLSMLPSSVGARGAAAAAPYHPFALPEQEVVNLFIPTQ 339
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAIL 465
+G +IGK G ++KQL + GASI + + P ++ VI E + + + +
Sbjct: 340 AVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMVIITGPPEAQFKAQGRIFGKL- 398
Query: 466 QLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPS G ++G+GG +NE++ T A++ V
Sbjct: 399 ----KEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVIV 447
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 38/188 (20%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSSPTK 183
P V + P++ +G +IGK G +K L A I +A P + ER++II P
Sbjct: 327 PEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMVIITGPPEA 386
Query: 184 IAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR 243
K Q + + ++ EE+ F + E + A
Sbjct: 387 QFKAQGR-------------------------IFGKLKEENFF------NPKEEVKLEAH 415
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---KPNV 300
+ VP+ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 416 IKVPSFAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVKIIGHFFASQT 472
Query: 301 AKRALYEV 308
A+R + E+
Sbjct: 473 AQRKIREI 480
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 77/181 (42%), Gaps = 14/181 (7%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
P P G SR S P Q+ +F +++L +G +IGK G +K
Sbjct: 89 PPPPQRSRRGGHASREQGSSPGGSQPKQL-----DFPLRMLVPTQFVGAIIGKEGLTIKN 143
Query: 423 L--QQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
L Q ++ IH ++ +++ + + EG +D +Q + E I
Sbjct: 144 LTKQTQSKVDIHRKENAGAAEKPITIHATPEGCSEACRMILDI---MQKEADETKSAEEI 200
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L +S VG ++G+ G + ++ + T I + LQD + E + ++GS+
Sbjct: 201 PLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITI----SPLQDLTIYNPERTITVKGST 256
Query: 541 E 541
E
Sbjct: 257 E 257
>gi|18858571|ref|NP_571566.1| insulin-like growth factor 2 mRNA-binding protein 3 [Danio rerio]
gi|82248267|sp|Q9PW80.1|IF2B3_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=Decapentaplegic and Vg-related 1 RNA-binding
protein; AltName: Full=IGF-II mRNA-binding protein 3;
AltName: Full=VICKZ family member 3; AltName: Full=Vg1
RNA-binding protein; Short=Vg1-RBP
gi|5596632|gb|AAD45610.1|AF161270_1 Vg1 RNA binding protein [Danio rerio]
gi|28278436|gb|AAH45873.1| Insulin-like growth factor 2 mRNA binding protein 3 [Danio rerio]
gi|182889884|gb|AAI65768.1| Igf2bp3 protein [Danio rerio]
Length = 582
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 166/399 (41%), Gaps = 74/399 (18%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKI 184
+D R+L P++ +G +IGK G ++++ ++T +KI + G+ E+ I ++S+P
Sbjct: 193 SDVPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVHSTPEGC 252
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
+ SA E M+ + +I EE I ++
Sbjct: 253 S--------SACRNIMEIMQKEA--------IDTKITEE----------------IPLKI 280
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L NN VG L+GK G ++++ +T I + P L N + + + G + +A
Sbjct: 281 LAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGTLDACAKA 338
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPS 364
E+ + ++ D +A MH L ++ P N L+ +
Sbjct: 339 EEEIMKKVRESYEND---------------------VAAMH-LQSNLIPGLN--LNALGL 374
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPG-QMGEVSAEFSMK-----ILCSAGKIGGVIGKGGF 418
P G PS ++ PPG Q G S M+ + A +G +IGK G
Sbjct: 375 FPGAASGGISPS-----VVSGPPPGAQAGYQSFGAQMESETVHLFIPALAVGAIIGKQGQ 429
Query: 419 NVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF--SE 476
++KQL + GASI + AP D + R G + + I + + F E
Sbjct: 430 HIKQLSRFAGASIKI--APADGIDAKQRMVIISGPPEAQFKAQGRIFGKLKEENFFGPKE 487
Query: 477 KGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ + + VPS G ++G+GG +NE++ T A++ V
Sbjct: 488 EVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVV 526
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 38/209 (18%)
Query: 118 QSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVI 175
QSFG ++TV+ + P+ +G +IGK G +K L A I + AD I +++R++
Sbjct: 400 QSFGAQMESETVH-LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADGI-DAKQRMV 457
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN 235
II P K Q ++ ++ EE+ FG
Sbjct: 458 IISGPPEAQFKAQG-------------------------RIFGKLKEENFFG------PK 486
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
E + A + VP+ G ++GK G + L++ T A + V+P D+ P N +V+I+
Sbjct: 487 EEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKIT 543
Query: 296 GKPNVAKRALYEVSTLLHQNPRKDKPPSS 324
G ++ A ++ ++ Q R+ +P S
Sbjct: 544 GHFYASQLAQRKIQEIISQVRRQQQPKPS 572
>gi|90081810|dbj|BAE90186.1| unnamed protein product [Macaca fascicularis]
Length = 300
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 132/298 (44%), Gaps = 53/298 (17%)
Query: 211 DALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRS 267
DA+ K I EED+ M++ +T RL+VP + G L+GK G I+ +R
Sbjct: 28 DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 87
Query: 268 ETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKD-----KP- 321
TGA ++V D LP +T+ V ISG P+ + + ++ ++ ++P K +P
Sbjct: 88 STGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK 143
Query: 322 PSSFP------QAYGGQNFHSPPAP-MADMH----------PLG--NSSWPARNSSLHGM 362
P+S P QAY Q ++ P P + +H PLG N ++P LH
Sbjct: 144 PASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSS 203
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+ G S +++ PP E++ + IG +IG+ G + +
Sbjct: 204 EEAQNLMGQ--------SSGLDASPPASTHELTIPNDL--------IGCIIGRQGTKINE 247
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
++Q +GA I + +A S ER I + + I+A L TSE + GT+
Sbjct: 248 IRQMSGAQIKIANATEGSSERQITITGTPANISLAQYLINARL-----TSEVTGMGTL 300
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 63/132 (47%), Gaps = 24/132 (18%)
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSE--------- 473
+++E+GA I++ + + ER++ + P A + K E
Sbjct: 1 MREESGARINISEG--NCPERIVT------ITGPTDAIFKAFAMIAYKFEEDIINSMSNS 52
Query: 474 -FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSEC 532
+ K +T RL+VP+S+ G ++G+GG I E+R T A ++V G D P S+E
Sbjct: 53 PATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG------DMLPNSTER 106
Query: 533 IVDIRGSSEHLI 544
V I G+ + +I
Sbjct: 107 AVTISGTPDAII 118
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 31 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 89
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 90 GAQVQVAGDMLPNSTERAVTISGTPDAI 117
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 224 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 276
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 277 ANISLAQYLINARLTS 292
>gi|193848519|gb|ACF22709.1| hypothetical protein-2 [Brachypodium distachyon]
Length = 429
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 118/271 (43%), Gaps = 44/271 (16%)
Query: 262 IQRLRSETGANIRVLP-ADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK 320
++ + SET A +RV A+ P + E+++I+G ++A+ +S+ L +
Sbjct: 161 LEAIASETNAELRVTSLAEGATPSVHSPKEVIEITGDRTTIRKAIVALSSYLQGDLHACS 220
Query: 321 PPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGS 380
+S + P+PM P +S P N YGD S + +
Sbjct: 221 LTTSV----------TTPSPM---FPWKSSEVPEPN--------------YGDLHSGVST 253
Query: 381 GSIN------SCPPGQMGEVSAE----FSMKILCSAGKIGGVIGKGGFNVKQLQQETGAS 430
N CP G V E S ++LC GG+IGK G +K + ETGAS
Sbjct: 254 KCANINVPWIDCPQDVAGNVETENLQQISFRLLCHVNLAGGLIGKKGMIIKGFETETGAS 313
Query: 431 IHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSE-----KGTITTRLL 485
I V + + ERVI SA E S+ AIL + ++ E K + R+L
Sbjct: 314 IDVGNPFSGCMERVITISALES-PGKHSKVQSAILCIFDRMEEVERNLMFGKPECSARVL 372
Query: 486 VPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
VP S+ ++G GG +I EM + T A I ++
Sbjct: 373 VPKSQFSSLVGLGGAIIKEMVKSTGARIEIL 403
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 76/168 (45%), Gaps = 30/168 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+LC GG+IGK G I+K ET A I V + G ERVI I
Sbjct: 283 FRLLCHVNLAGGLIGKKGMIIKGFETETGASIDVGNPFSGCMERVITI------------ 330
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRI--IEEDLFGGMASDDDNENSTITARLLVP 247
+ ES H Q A+L + DR+ +E +L G +AR+LVP
Sbjct: 331 --------SALESPGKHSKVQSAILCIFDRMEEVERNLMFG--------KPECSARVLVP 374
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
+ L+G G +I+ + TGA I +L +P CA N + ++Q S
Sbjct: 375 KSQFSSLVGLGGAIIKEMVKSTGARIEILDEMDVPACASNCERVLQAS 422
>gi|402862114|ref|XP_003895414.1| PREDICTED: poly(rC)-binding protein 3-like, partial [Papio anubis]
Length = 327
Score = 80.1 bits (196), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 65/230 (28%), Positives = 107/230 (46%), Gaps = 50/230 (21%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAPMADMH 345
+ ++ ++P K +P P+S P QAY Q ++ P P +H
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDVSLH 243
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++ +
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT--- 94
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 95 ---GPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 115 SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEER 173
S S S+P T+ R++ P+ + G +IGK G+ +K +RE T A++ VA D +P S ER
Sbjct: 118 SMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTER 176
Query: 174 VIIIYSSPTKI 184
+ I +P I
Sbjct: 177 AVTISGTPDAI 187
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 95
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
>gi|195131533|ref|XP_002010205.1| GI15803 [Drosophila mojavensis]
gi|193908655|gb|EDW07522.1| GI15803 [Drosophila mojavensis]
Length = 596
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 103/434 (23%), Positives = 188/434 (43%), Gaps = 76/434 (17%)
Query: 136 SRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
S +G +IG+ G ++++ ++++A++ V + + GS E+ I IY +P ++
Sbjct: 84 SEMVGAIIGRQGTTIRTITQQSRARVDVHRKENV-GSLEKSITIYGNP--------ENCT 134
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
+A + E M+ Q+AL S + E I ++L NN++G
Sbjct: 135 NACKRILEVMQ-----QEAL-----------------STNKGE---ICLKILAHNNLIGR 169
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I+R+ +T I V + + + N + ++ + G RA ++ST L
Sbjct: 170 IIGKSGNTIKRIMQDTDTKITVSSINDI--NSFNLERIITVKGLIENMSRAENQISTKLR 227
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
Q+ D QA Q+ P +HP+ S P +GM M
Sbjct: 228 QSYENDL------QAMAPQSLMFP-----GLHPMAMMSTPG-----NGMVFNTSMPFPSC 271
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
Q M + PP ++ + I +A +G +IG G +++ + + + AS+ +
Sbjct: 272 QSFAMSKTPASVVPPAFPNDMQETTFLYIPNNA--VGAIIGTKGSHIRSIMRFSSASLKI 329
Query: 434 EDAPTDSDE--------RVIRASAFEGLWNPRSQTIDAILQLQNKTSEF---SEKGTITT 482
AP D+D+ +V EG W + + + + F ++ +T
Sbjct: 330 --APLDADKPLDQQTERKVTIVGTPEGQWKAQYMIFEKM-----REEGFMCGTDDVRLTV 382
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEH 542
LLV SS+VG I+G+GG + E++R T + I++ L P G E V I G
Sbjct: 383 ELLVASSQVGRIIGKGGQNVRELQRVTGSVIKL--PEHALAPPSGGDEETPVHIIGPFYS 440
Query: 543 LISAHGTYQSFMTS 556
+ SA ++ M S
Sbjct: 441 VQSAQRRIRAMMLS 454
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 78/172 (45%), Gaps = 17/172 (9%)
Query: 409 IGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERVIRASAFEGLWNPRSQT--IDAIL 465
+G +IG+ G ++ + Q++ A + V S E+ I NP + T IL
Sbjct: 87 VGAIIGRQGTTIRTITQQSRARVDVHRKENVGSLEKSITI-----YGNPENCTNACKRIL 141
Query: 466 QLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDP 525
++ + + + KG I ++L ++ +G I+G+ G+ I + + T I V + D
Sbjct: 142 EVMQQEALSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSS----INDI 197
Query: 526 HPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSYQNINP 572
+ + E I+ ++G E++ A QS+ Q+M Q + ++P
Sbjct: 198 NSFNLERIITVKGLIENMSRAENQISTKLRQSYENDLQAMAPQSLMFPGLHP 249
>gi|432848574|ref|XP_004066413.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 349
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 145/338 (42%), Gaps = 66/338 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +RE++ A+I +++ ER++ I K
Sbjct: 19 RLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIVTXXXXXXXIFK---- 72
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
A + + EED+ M++ +T RL+VP +
Sbjct: 73 ---------------------AFAMIAYKF-EEDIINSMSNSPATSKPPVTLRLVVPASQ 110
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
G L+GK G I+ +R TGA ++V D LP +T+ V ISG P + + ++
Sbjct: 111 CGSLIGKGGSKIKEMRESTGAQVQV-AGDMLP---NSTERAVTISGAPEAIIQCVKQICV 166
Query: 311 LLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL----H 360
++ ++P K +P P+S P + G + PLG S+ N SL
Sbjct: 167 VMLESPPKGATIPYRPKPASTPVIFSGGQVRA--------DPLGASTA---NLSLLLQHQ 215
Query: 361 GMPSTPWMGGYG---DQPSRMGSGSINSCPPGQMGEVSAEF----------SMKILCSAG 407
+P+ G Y S++ ++ P +G+ + F + ++
Sbjct: 216 PLPAYTIQGQYAIPHPDLSKLHQLAMQQTPFTPLGQTTPAFPGLDASNQASTHELTIPND 275
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 276 LIGCIIGRQGTKINEIRQMSGAQIKIANAMEGSSERQI 313
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++++GA I++ + + ER++
Sbjct: 10 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINISEG--NCPERIVTXXXXX 67
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + D I + N S + K +T RL+VP+S+ G ++G+GG I
Sbjct: 68 XXIFKAFAMIAYKFEE--DIINSMSN--SPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 123
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
EMR T A ++V G D P S+E V I G+ E +I
Sbjct: 124 EMRESTGAQVQVAG------DMLPNSTERAVTISGAPEAII 158
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 108/266 (40%), Gaps = 60/266 (22%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEMREST 129
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKT----------------------------- 187
A++ VA D +P S ER + I +P I +
Sbjct: 130 GAQVQVAGDMLPNSTERAVTISGAPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 189
Query: 188 -----QNKDDDSAAETKKESM----EP---------HCAAQDALLKVHDRIIEEDLFGGM 229
Q + D A T S+ +P + L K+H +++ F +
Sbjct: 190 IFSGGQVRADPLGASTANLSLLLQHQPLPAYTIQGQYAIPHPDLSKLHQLAMQQTPFTPL 249
Query: 230 ASDD------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP 283
D N T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 250 GQTTPAFPGLDASNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANA----- 304
Query: 284 CAMNTDEMVQISGKPNVAKRALYEVS 309
+++ + I+G P A Y ++
Sbjct: 305 MEGSSERQITITGTPANISLAQYLIN 330
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 13/73 (17%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS- 539
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 267 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANAMEGSSERQITITGTP 319
Query: 540 -----SEHLISAH 547
+++LI+A
Sbjct: 320 ANISLAQYLINAR 332
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R ++GA I +
Sbjct: 13 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREDSGARINI 51
>gi|255719726|ref|XP_002556143.1| KLTH0H06050p [Lachancea thermotolerans]
gi|238942109|emb|CAR30281.1| KLTH0H06050p [Lachancea thermotolerans CBS 6340]
Length = 392
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 164/402 (40%), Gaps = 64/402 (15%)
Query: 88 NFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVY-RILCPSRKIGGVIGKA 146
N K++ + + IK+ ++ GN D ++ R+LC ++ ++G
Sbjct: 15 NVLKRKKEDCQEELLEAEIKRVALDDTEETNDPGNEINKDYIHLRMLCLVKQASMIVGPG 74
Query: 147 GNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPH 206
G + ++EET +I V+D I G ERVI I +AK
Sbjct: 75 GEKISRMKEETNTRINVSDNIRGVPERVIFIRGRCEDVAKVFG----------------- 117
Query: 207 CAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLR 266
++ + G + +++T+T +L+P++M+GC++G++G ++ +
Sbjct: 118 -------------MVVRAINGETDGESSEQSATLTLNILIPHHMMGCVIGRQGSRLREIE 164
Query: 267 SETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV--STLLHQNPRKDKP--- 321
+ A + P LP M+ D ++ +SG + A Y V + L H+ K
Sbjct: 165 ELSAAKLMAGP-QTLP---MSNDRILCVSGVADAIHIATYYVGQTILNHKATFASKKCIF 220
Query: 322 ------PSSFPQAYG-----GQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGG 370
S +YG Q P S+ P + G+PS P M
Sbjct: 221 YLPSLLHSVLVNSYGVSLQHQQQHQYRPGENGKKRLHRYSASPDFGYAYPGVPSAPHMAV 280
Query: 371 YGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGAS 430
+ + + + + + PP ++S ++ +G VIGKGG ++ +++ TG S
Sbjct: 281 HNVRVADTLAAA--TIPPALAPQLSL-IQQEVYIDDNYVGNVIGKGGKHINSIKETTGCS 337
Query: 431 IHVEDAPTDSDER--VIRASAFEGLWNPRSQTIDAILQLQNK 470
I ++D ER +IR + SQT AIL + NK
Sbjct: 338 IQIDDHVEGCSERKILIRGTPI------GSQT--AILLINNK 371
Score = 46.6 bits (109), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 64/125 (51%), Gaps = 7/125 (5%)
Query: 393 EVSAEF-SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
E++ ++ +++LC + ++G GG + ++++ET I+V D ERVI
Sbjct: 50 EINKDYIHLRMLCLVKQASMIVGPGGEKISRMKEETNTRINVSDNIRGVPERVI---FIR 106
Query: 452 GLWNPRSQTIDAILQLQNKTS--EFSEK-GTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
G ++ +++ N + E SE+ T+T +L+P +GC++G+ G + E+
Sbjct: 107 GRCEDVAKVFGMVVRAINGETDGESSEQSATLTLNILIPHHMMGCVIGRQGSRLREIEEL 166
Query: 509 TQADI 513
+ A +
Sbjct: 167 SAAKL 171
>gi|149641305|ref|XP_001512362.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
isoform 1 [Ornithorhynchus anatinus]
Length = 584
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 88/398 (22%), Positives = 163/398 (40%), Gaps = 73/398 (18%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKI 184
+D R+L P++ +G +IGK G ++++ ++TQ+KI + G+ E+ I I+S+P
Sbjct: 195 SDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTP--- 251
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
E C K+ I++++ + D I ++
Sbjct: 252 ----------------EGCSTAC-------KIIMEIMQKE------AQDTKFTEEIPLKI 282
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L NN VG L+GK G ++++ +T I + P L N + + + G +A
Sbjct: 283 LAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIETCAKA 340
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG--NSSWPARNSSLHGM 362
E+ + + S+ N + P +++ LG S G+
Sbjct: 341 EEEIMKKIRE---------SYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPTVGV 391
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
S + + S PP G+ ++ + A +G +IGK G ++KQ
Sbjct: 392 AS---------------AAAATSYPP--FGQQPESETVHLFIPALAVGAIIGKQGQHIKQ 434
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EK 477
L + GASI + AP + + +R G P A ++ K E + E+
Sbjct: 435 LSRFAGASIKI--APAEGPDAKLRVVIITG---PPEAQFKAQGRIYGKLKEENFFGPKEE 489
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ + VPS G ++G+GG +NE++ T A++ V
Sbjct: 490 VKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVV 527
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 85/193 (44%), Gaps = 39/193 (20%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIY 178
FG ++TV+ + P+ +G +IGK G +K L A I +A P ++ RV+II
Sbjct: 403 FGQQPESETVH-LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRVVIIT 461
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
P K Q +++ ++ EE+ FG E
Sbjct: 462 GPPEAQFKAQG-------------------------RIYGKLKEENFFG------PKEEV 490
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-- 296
+ A + VP+ G ++GK G + L++ T A + V+P D+ P N +V+I+G
Sbjct: 491 KLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 547
Query: 297 -KPNVAKRALYEV 308
+A+R + E+
Sbjct: 548 YACQLAQRKIQEI 560
>gi|194222666|ref|XP_001498933.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Equus caballus]
Length = 620
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 101/427 (23%), Positives = 174/427 (40%), Gaps = 79/427 (18%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 195 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 254
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E A +L++ +
Sbjct: 255 NSGAAEKPVTIHATP----------------------EGTSEACRMILEIMQK------- 285
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 286 ---EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 340
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 341 NPERTITVKGTVEACANAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 391
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPS------RMGSGSINSC-PPGQMGEVSAEFS 399
LG S + L +P P G G P+ SG +S PP Q S
Sbjct: 392 LGIFS-----TGLSMLP--PPAGPRGVPPAPPYHPFATHSGYFSSLYPPHQFSPFPHHHS 444
Query: 400 ------MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA--PTDSDERVIRASAFE 451
+ + +G +IGK G ++KQL + GASI + A P S+ VI E
Sbjct: 445 YPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPE 504
Query: 452 GLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+ + + + K F E+ + + VPSS G ++G+GG +NE++
Sbjct: 505 AQFKAQGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNL 559
Query: 509 TQADIRV 515
T A++ V
Sbjct: 560 TSAEVIV 566
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 443 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 502
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 503 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 531
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 532 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP--DENEEVIVRIIGHFFA 588
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 589 SQTAQRKIREI 599
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 80/181 (44%), Gaps = 13/181 (7%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
P P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 184 PPPPQRAQRGDHSSR----EQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 239
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 240 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT-SEACRMILEIMQKEADETKLAEE--I 296
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 297 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 352
Query: 541 E 541
E
Sbjct: 353 E 353
>gi|308321889|gb|ADO28082.1| poly(rc)-binding protein 2 [Ictalurus furcatus]
Length = 318
Score = 79.7 bits (195), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 138/327 (42%), Gaps = 69/327 (21%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ ER+I + T I K
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTAIFK--- 70
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
A + D++ EED+ M++ +T R++VP +
Sbjct: 71 ----------------------AFSMIIDKL-EEDISSSMSNSTATSKPPVTLRIVVPAS 107
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + ++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGTPLSIIECVKQIC 163
Query: 310 TLLHQNPRKD-------KP---PSSFP--QAYGGQNFHSPPAP-MADMHPLGNSSWPARN 356
++ ++P K KP P +F QAY Q H+ P P + +H L P
Sbjct: 164 VVMLESPPKGVTIPYRPKPSGSPVTFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP--- 220
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
P P G+ M + S ++ IG +IG+
Sbjct: 221 -----FPLAPSSQGF----------------TAGMDATTQTGSHELTIPNDLIGCIIGRQ 259
Query: 417 GFNVKQLQQETGASIHVEDAPTDSDER 443
G + +++Q +GA I + + S++R
Sbjct: 260 GAKINEIRQMSGAQIKIANPVEGSNDR 286
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 37/231 (16%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSE 171
+SS S S+P T+ RI+ P+ + G +IGK G +K +RE T A++ VA D +P S
Sbjct: 84 SSSMSNSTATSKPPVTL-RIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST 142
Query: 172 ERVIIIYSSPTKIAKTQNKDDDSAAET----------KKESMEP--------------HC 207
ER I I +P I + + E+ K S P H
Sbjct: 143 ERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVTFAGGQAYAVQGQHA 202
Query: 208 AAQDALLKVHDRIIEEDLF------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV 261
Q L K+H +++ F G + D T + L +PN+++GC++G++G
Sbjct: 203 IPQPDLTKLHQLAMQQSPFPLAPSSQGFTAGMDATTQTGSHELTIPNDLIGCIIGRQGAK 262
Query: 262 IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
I +R +GA I++ P + D V I+G P A Y ++ L
Sbjct: 263 INEIRQMSGAQIKI-----ANPVEGSNDRQVTITGSPASISLAEYLINARL 308
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S ID + + + N T+ + K +T R++VP+S+ G ++G+GG I E+
Sbjct: 66 TAIFKAFSMIIDKLEEDISSSMSNSTA--TSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G+ +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGTPLSII 156
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 13/71 (18%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS
Sbjct: 244 ELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSNDRQVTITGSPAS 296
Query: 540 ---SEHLISAH 547
+E+LI+A
Sbjct: 297 ISLAEYLINAR 307
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|449274935|gb|EMC83962.1| Poly(rC)-binding protein 4 [Columba livia]
Length = 324
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 142/337 (42%), Gaps = 81/337 (24%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L ++IG +IGK G VK +RE++ A+IT+++ GS ER+ I S
Sbjct: 25 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGS-------- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNEN-STITARL 244
DA+ + I +EEDL G SD S +T RL
Sbjct: 74 ---------------------TDAVFRAVSMIAFKLEEDL--GAGSDGAAVGRSPVTLRL 110
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
++P + G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+
Sbjct: 111 VIPASQCGSLIGKAGAKIREIRESTGAQVQV-AGDLLP---NSTERAVTVSGVPDTIIHC 166
Query: 305 LYEVSTLLHQNPRKD--KPPSSFPQAYGGQ--------------NFHSPPAPMAD--MHP 346
+ ++ ++ + P + + +FP +G SPP P HP
Sbjct: 167 VRQICAVILEVPTESPTQAWGAFPHQHGYLPPKMTLSLISWSPCTHQSPPNPAVGKHWHP 226
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
+ ++ + P+TP + S PPG + S S + L
Sbjct: 227 IMTDAYS------YWRPTTPLLTSL-------------SLPPG-LDTSSQNSSQEFLVPN 266
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
IG +IG+ G + +++Q +GA I + + S ER
Sbjct: 267 DLIGCIIGRHGSKISEIRQMSGAHIKIGNQTEGSSER 303
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 87/172 (50%), Gaps = 19/172 (11%)
Query: 379 GSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT 438
G+ S++ P + E+S ++++L +IG +IGK G VK++++++ A I + +
Sbjct: 6 GASSVSGSP--EDTELSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG-- 61
Query: 439 DSDERVIRASAFEGLWNPRSQTIDAI-LQLQNKTSEFSE-----KGTITTRLLVPSSKVG 492
ER+ + G + + + I +L+ S+ + +T RL++P+S+ G
Sbjct: 62 SCPERI---TTITGSTDAVFRAVSMIAFKLEEDLGAGSDGAAVGRSPVTLRLVIPASQCG 118
Query: 493 CILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
++G+ G I E+R T A ++V G D P S+E V + G + +I
Sbjct: 119 SLIGKAGAKIREIRESTGAQVQVAG------DLLPNSTERAVTVSGVPDTII 164
>gi|260829253|ref|XP_002609576.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
gi|229294938|gb|EEN65586.1| hypothetical protein BRAFLDRAFT_87781 [Branchiostoma floridae]
Length = 408
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/329 (23%), Positives = 138/329 (41%), Gaps = 56/329 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
G + R++ + +G +IGK G+ +K REE+ A+I ++D S ER++ I S
Sbjct: 13 GEAPSVTLTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISDG--SSPERIVTITGS 70
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
I K N + + EED+ + +
Sbjct: 71 TENILKAFN--------------------------MIGKKFEEDMKAAHV-NSSVPVPPV 103
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T RL+VP + G L+GK G I+ +R TGA+I+V D LP +T+ V +SG P+
Sbjct: 104 TLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA-GDMLP---NSTERAVTVSGTPDA 159
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPP----APMADMHPLGNSSWPARN 356
+ +Y + ++ ++P K P+ G + P + +H L
Sbjct: 160 ISQCVYHICCVMLESPPKGATIPYKPRPASGTSTSGPVVFAGGQLTKLHQL--------- 210
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGS--GSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
+ TP++ P+ + + G + PG + E ++ IG +IG
Sbjct: 211 ----ALQQTPYITPGTTLPAALATQFGVQTASQPGNPSSQTHELTIP----NELIGCIIG 262
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDER 443
KGG + +++Q +GA+I + S +R
Sbjct: 263 KGGCKINEIRQCSGATIKIAGMQEGSTDR 291
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 90/219 (41%), Gaps = 36/219 (16%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYSSPTKIA--- 185
R++ P+ + G +IGK G+ +K +RE T A I VA D +P S ER + + +P I+
Sbjct: 105 LRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVAGDMLPNSTERAVTVSGTPDAISQCV 164
Query: 186 ------------KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED--------- 224
K + + P A L K+H +++
Sbjct: 165 YHICCVMLESPPKGATIPYKPRPASGTSTSGPVVFAGGQLTKLHQLALQQTPYITPGTTL 224
Query: 225 ------LFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA 278
FG + S+ T L +PN ++GC++GK G I +R +GA I++
Sbjct: 225 PAALATQFGVQTASQPGNPSSQTHELTIPNELIGCIIGKGGCKINEIRQCSGATIKIAGM 284
Query: 279 DRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPR 317
+TD V I+G P A + ++T L R
Sbjct: 285 QE-----GSTDRQVTITGTPESISMAQFLINTSLELAKR 318
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 77/159 (48%), Gaps = 25/159 (15%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ +G +IGK G +K+ ++E+GA I++ D S ER++ +
Sbjct: 17 SVTLTIRLIMQGKDVGSIIGKKGDTIKRFREESGARINISDG--SSPERIVTITG----- 69
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGT----------ITTRLLVPSSKVGCILGQGGHVINE 504
++ I + K E K +T RL+VP+S+ G ++G+GG I E
Sbjct: 70 --STENILKAFNMIGKKFEEDMKAAHVNSSVPVPPVTLRLIVPASQCGSLIGKGGSKIKE 127
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+R T A I+V G D P S+E V + G+ + +
Sbjct: 128 IREVTGASIQVAG------DMLPNSTERAVTVSGTPDAI 160
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 45/87 (51%), Gaps = 11/87 (12%)
Query: 461 IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARV 520
+D L +NK + T+T RL++ VG I+G+ G I R + GAR+
Sbjct: 1 MDISLTTENKVPGEAPSVTLTIRLIMQGKDVGSIIGKKGDTIKRFREES-------GARI 53
Query: 521 KLQDPHPGSS-ECIVDIRGSSEHLISA 546
+ D GSS E IV I GS+E+++ A
Sbjct: 54 NISD---GSSPERIVTITGSTENILKA 77
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+GG INE+R+ + A I++ G +Q+ GS++ V I G+
Sbjct: 247 THELTIPNELIGCIIGKGGCKINEIRQCSGATIKIAG----MQE---GSTDRQVTITGTP 299
Query: 541 EHL 543
E +
Sbjct: 300 ESI 302
>gi|348503027|ref|XP_003439068.1| PREDICTED: poly(rC)-binding protein 4-like [Oreochromis niloticus]
Length = 446
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 103/431 (23%), Positives = 182/431 (42%), Gaps = 124/431 (28%)
Query: 117 EQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERV 174
EQ FG+ T+ R+L +++G +IGK G VK +REE+ A++ +++ GS ER+
Sbjct: 4 EQDFGDGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE---GSCPERI 60
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMAS 231
I I S D++ + I +EEDL +A+
Sbjct: 61 ITITGS-----------------------------TDSVFRAFTMITYKLEEDLTALVAN 91
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
+ +T RL++P + G L+GK G I+ +R TGA I+V D LP +T+
Sbjct: 92 GTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQV-AGDLLPN---STERG 147
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSS 351
V ISG + + + + T++ ++P K ++ P + P+P A + GN
Sbjct: 148 VTISGNQDSVIQCVKLICTVILESPPKG---ATIP-------YRPSPSPAALLIA-GNQV 196
Query: 352 WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGG 411
+ A + H + S
Sbjct: 197 FEASEFAPHPLYS----------------------------------------------- 209
Query: 412 VIGKGGFNVKQ---LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQ 468
+ +GG +++Q LQ + G P ++ + S +GL +P +Q A++
Sbjct: 210 -VAQGGLDLQQAYTLQNQYGI-------PHSELAKLHQLSVQQGL-SPIAQPASAVIPGM 260
Query: 469 NKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPG 528
+ S+ S++ LL+P+ +G I+G+ G INE+R +V GA++K+ G
Sbjct: 261 DSNSQTSQE------LLIPNDLIGSIIGRQGTKINEIR-------QVSGAQIKIGSQLDG 307
Query: 529 SSECIVDIRGS 539
+S+ V I G+
Sbjct: 308 TSDRHVTITGT 318
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP--------TDSDER 443
G + ++++L ++G +IGK G VK++++E+ A +++ + T S +
Sbjct: 10 GGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCPERIITITGSTDS 69
Query: 444 VIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
V RA F + + + A++ N T S K +T RL++P+S+ G ++G+GG I
Sbjct: 70 VFRA--FTMITYKLEEDLTALVA--NGT--ISSKPPVTLRLVIPASQCGSLIGKGGAKIK 123
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A I+V G D P S+E V I G+ + +I
Sbjct: 124 EIRESTGAQIQVAG------DLLPNSTERGVTISGNQDSVI 158
>gi|219888687|gb|ACL54718.1| unknown [Zea mays]
Length = 448
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 21/192 (10%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D+V+R++ P K+G +IG+ G ++K L EET+A++ + + G+ ER++++
Sbjct: 43 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLV------- 95
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
S E + P A DAL++V R+ + ARL
Sbjct: 96 ---------SGKEDPDLELPP---AMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARL 143
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD--RLPPCAMNTDEMVQISGKPNVAK 302
LVP L+GK+G I+ ++ T A IRV+ D P + + +V+I G
Sbjct: 144 LVPGAQAINLIGKQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVL 203
Query: 303 RALYEVSTLLHQ 314
+AL VS L +
Sbjct: 204 KALQAVSNHLRK 215
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G +K+L +ET A + + + P + ER++ S E
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELPP 107
Query: 460 TIDAILQLQNKTSEFSE---KGT--------ITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+DA++++ + + ++ +GT RLLVP ++ ++G+ G I ++
Sbjct: 108 AMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQES 167
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
T A IRV+ + + E IV+I+G +E ++ A
Sbjct: 168 TSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKA 205
>gi|410970839|ref|XP_003991884.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Felis catus]
Length = 542
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 171/425 (40%), Gaps = 75/425 (17%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 117 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 176
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 177 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 205
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 206 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 262
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 263 NPERTITVKGTVEACANAEVEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 313
Query: 347 LGNSSWPARNSSLHGMP----STPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS-- 399
LG S + L +P P SG +S PP Q G S
Sbjct: 314 LGIFS-----TGLSVLPPPTGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYP 368
Query: 400 ----MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGL 453
+ + +G +IGK G ++KQL + GASI + + P S+ VI E
Sbjct: 369 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 428
Query: 454 WNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
+ + + + K F E+ + + VPSS G ++G+GG +NE++ T
Sbjct: 429 FKAQGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTS 483
Query: 511 ADIRV 515
A++ V
Sbjct: 484 AEVIV 488
>gi|218184511|gb|EEC66938.1| hypothetical protein OsI_33565 [Oryza sativa Indica Group]
Length = 800
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 104/235 (44%), Gaps = 57/235 (24%)
Query: 112 SNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE 171
+N S ++ P +V+R+L P+ K+G VIG +G ++ L EET+A + V +
Sbjct: 224 TNCSAGENRDPGWPGTSVFRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAA 283
Query: 172 ERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMAS 231
ER +II++ K++ EP A DALL+V++ I +D G+
Sbjct: 284 ERAVIIFA-------------------KEQPDEPKPPAIDALLRVYECTINDD---GL-- 319
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVL--------------- 276
D N+ + AR+L P+ L+G +G VI ++ + NI V+
Sbjct: 320 -DVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASKTNIHVIGNFLTLMHLLEPLVP 378
Query: 277 ----------------PAD-RLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQ 314
AD LPP A+ D +++I G P +AL V+ L +
Sbjct: 379 SIDKFDISGLQLSIYTDADGDLPPVALEDDMIIEIWGLPARVHQALELVACHLRK 433
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 64/128 (50%), Gaps = 5/128 (3%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
++L A K+G VIG G +++L +ET A + V + ER + A E P+
Sbjct: 242 FRMLIPATKVGAVIGHSGERLRRLCEETKACVRVIGGHFAAAERAVIIFAKEQPDEPKPP 301
Query: 460 TIDAILQLQNKT-----SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
IDA+L++ T + + R+L PS + ++G G VIN +++ ++ +I
Sbjct: 302 AIDALLRVYECTINDDGLDVRYNNIVVARILTPSEQAASLIGDQGSVINYIKKASKTNIH 361
Query: 515 VVGARVKL 522
V+G + L
Sbjct: 362 VIGNFLTL 369
>gi|449304748|gb|EMD00755.1| hypothetical protein BAUCODRAFT_60994 [Baudoinia compniacensis UAMH
10762]
Length = 333
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 147/327 (44%), Gaps = 53/327 (16%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A R + S++ G +IGKAG V LR++T + V+ +PG +RV+ + T I+
Sbjct: 16 AQITLRAIVTSKEAGVIIGKAGQNVAELRDKTGVRAGVSKVVPGVHDRVLTVTGPLTGIS 75
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
E + D L+K ++ GM N N T RLL
Sbjct: 76 ------------------EAYGLVADGLVKGAPQM-------GMGGVVANPN-THPIRLL 109
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+ +N +G ++G++G I++++ +G +R++ + P +T+ +V+I G P+ ++A+
Sbjct: 110 ISHNQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLP--QSTERIVEIQGTPDGVQKAV 165
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP-- 363
+E+ L + + Y G +SP + P PA N + +G P
Sbjct: 166 WEIGKCLIDDQER---------GY-GTVLYSPAVRVQGAAPT-----PAMNGTGYGAPRG 210
Query: 364 -----STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
+ G G R +G ++ PP + + + I A +G +IG+GG
Sbjct: 211 YNRTGNGADFTGSGAPYQRRSTGPSDTGPPPAVEDGEDIQTQNISIPADMVGCIIGRGGS 270
Query: 419 NVKQLQQETGASIHVEDAP-TDSDERV 444
+ ++++ +GA I + AP D+ ER+
Sbjct: 271 KISEIRKSSGARISIAKAPHDDTGERM 297
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 36/158 (22%), Positives = 76/158 (48%), Gaps = 16/158 (10%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLW 454
A+ +++ + ++ + G +IGK G NV +L+ +TG V +RV+ + G+
Sbjct: 16 AQITLRAIVTSKEAGVIIGKAGQNVAELRDKTGVRAGVSKVVPGVHDRVLTVTGPLTGIS 75
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGTITT------RLLVPSSKVGCILGQGGHVINEMRRR 508
D +++ + G + RLL+ +++G I+G+ G I ++ +
Sbjct: 76 EAYGLVADGLVK---GAPQMGMGGVVANPNTHPIRLLISHNQMGTIIGRQGLKIKQI--Q 130
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
+ +R+V + L P S+E IV+I+G+ + + A
Sbjct: 131 DASGVRMVAQKEML----PQSTERIVEIQGTPDGVQKA 164
>gi|327275209|ref|XP_003222366.1| PREDICTED: poly(rC)-binding protein 3-like [Anolis carolinensis]
Length = 461
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 85/344 (24%), Positives = 146/344 (42%), Gaps = 66/344 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ GS I+ + PT
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSCPERIVTITGPT-------- 68
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M + +T RL++P
Sbjct: 69 --------------------DAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVIP 108
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 109 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 164
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
+ ++ ++P K +P P+S P + GGQ A H + A ++
Sbjct: 165 ICVVMLESPPKGATIPYRPKPASAPIIFAGGQVRADTLLASAGNHAVLAQPQTAPAFTIQ 224
Query: 361 GMPSTP---------WMGGYGDQPS--RMGSGSINSCPPGQMGEVSAEF----------S 399
G + P Y PS ++ ++ P +G+ + F S
Sbjct: 225 GQYAIPHPDVSSMHVLYFLYSLLPSLTKLHQLAMQHPPFTPLGQTTPGFPGLDASTPASS 284
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
++ IG +IG+ G + +++Q +GA I + +A S ER
Sbjct: 285 HELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAER 328
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + ER++ +
Sbjct: 11 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT 68
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + I+A + S + K +T RL++P+S+ G ++G+GG I
Sbjct: 69 DAIFKAFSMIALKFEEDINASM----TNSTVTSKPPVTLRLVIPASQCGSLIGKGGSKIK 124
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 125 EIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 159
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ +K N+S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPPVTL-RLVIPASQCGSLIGKGGSKIKEIREST 130
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 131 GAQVQVAGDMLPNSTERAVTISGTPDAI 158
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 54/103 (52%), Gaps = 15/103 (14%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
L +P+ +GCI+G+ G INE+R+ + GA++K+ + GS+E V I GS
Sbjct: 286 ELTIPNDLIGCIIGRQGSKINEIRQMS-------GAQIKIANATEGSAERQVTITGSPAN 338
Query: 540 ---SEHLISAHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQT 579
+++LI+A + + S Q+ V N+N QS+ T
Sbjct: 339 ISLAQYLINA--SLEMAKVSTQTASVTTPVDLNMNLSQSATPT 379
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 14 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 52
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 37/71 (52%), Gaps = 5/71 (7%)
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
L +PN+++GC++G++G I +R +GA I++ A + + V I+G P
Sbjct: 286 ELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATE-----GSAERQVTITGSPANIS 340
Query: 303 RALYEVSTLLH 313
A Y ++ L
Sbjct: 341 LAQYLINASLE 351
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPT 182
S PA + + + P+ IG +IG+ G+ + +R+ + A+I +A+ GS ER + I SP
Sbjct: 279 STPASS-HELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITGSPA 337
Query: 183 KIAKTQ 188
I+ Q
Sbjct: 338 NISLAQ 343
>gi|414867775|tpg|DAA46332.1| TPA: nucleic acid binding protein [Zea mays]
Length = 448
Score = 79.3 bits (194), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 90/192 (46%), Gaps = 21/192 (10%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D+V+R++ P K+G +IG+ G ++K L EET+A++ + + G+ ER++++
Sbjct: 43 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLV------- 95
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
S E + P A DAL++V R+ + ARL
Sbjct: 96 ---------SGKEDPDLELPP---AMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARL 143
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD--RLPPCAMNTDEMVQISGKPNVAK 302
LVP L+GK+G I+ ++ T A IRV+ D P + + +V+I G
Sbjct: 144 LVPGAQAINLIGKQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVL 203
Query: 303 RALYEVSTLLHQ 314
+AL VS L +
Sbjct: 204 KALQAVSNHLRK 215
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 79/158 (50%), Gaps = 11/158 (6%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G +K+L +ET A + + + P + ER++ S E
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELPP 107
Query: 460 TIDAILQLQNKTSEFSE---KGT--------ITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+DA++++ + + ++ +GT RLLVP ++ ++G+ G I ++
Sbjct: 108 AMDALMRVFKRVTGITDGAAEGTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQES 167
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
T A IRV+ + + E IV+I+G +E ++ A
Sbjct: 168 TSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKA 205
>gi|410970835|ref|XP_003991882.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Felis catus]
Length = 536
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 100/425 (23%), Positives = 171/425 (40%), Gaps = 75/425 (17%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 111 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 170
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 171 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 199
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 200 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 256
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 257 NPERTITVKGTVEACANAEVEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 307
Query: 347 LGNSSWPARNSSLHGMP----STPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS-- 399
LG S + L +P P SG +S PP Q G S
Sbjct: 308 LGIFS-----TGLSVLPPPTGPRGAPPAPPYHPFATHSGYFSSLYPPHQFGPFPHHHSYP 362
Query: 400 ----MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGL 453
+ + +G +IGK G ++KQL + GASI + + P S+ VI E
Sbjct: 363 EQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQ 422
Query: 454 WNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
+ + + + K F E+ + + VPSS G ++G+GG +NE++ T
Sbjct: 423 FKAQGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTS 477
Query: 511 ADIRV 515
A++ V
Sbjct: 478 AEVIV 482
>gi|363737066|ref|XP_003641794.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Gallus gallus]
Length = 564
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 94/414 (22%), Positives = 170/414 (41%), Gaps = 76/414 (18%)
Query: 113 NSSREQSF---GNSQPA--DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
++SREQ G+SQP D R+L P++ +G +IGK G +K+L ++TQ+K+ +
Sbjct: 161 HASREQGSSPGGSSQPKQLDFPLRMLVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRKE 220
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ I I+++P +A + D + +E
Sbjct: 221 NAGAAEKPITIHATPE-------------------------GCSEACRMILDIMQKE--- 252
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N++VG L+GK G ++++ +TG I + P L
Sbjct: 253 ----ADETKSAEEIPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDL--TIY 306
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + D + ++
Sbjct: 307 NPERTITVKGSTEACSNAEVEIMKKLREAYEND---------------------IVAVNQ 345
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
N P N S G+ ST G PS G+ + P + + + +
Sbjct: 346 QANL-IPGLNLSALGIFST----GLSMLPSSAGARGAAAAAPYHPFALPEQEVVNLFIPT 400
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
+G +IGK G ++KQL + GASI + + P ++ VI E + + + +
Sbjct: 401 QAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMVIITGPPEAQFKAQGRIFGKL 460
Query: 465 LQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPS G ++G+GG +NE++ T A++ V
Sbjct: 461 -----KEENFFNPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVIV 509
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 79/188 (42%), Gaps = 38/188 (20%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSSPTK 183
P V + P++ +G +IGK G +K L A I +A P + ER++II P
Sbjct: 389 PEQEVVNLFIPTQAVGAIIGKKGQHIKQLARFAGASIKIAPAEGPDATERMVIITGPPEA 448
Query: 184 IAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR 243
K Q + + ++ EE+ F + E + A
Sbjct: 449 QFKAQGR-------------------------IFGKLKEENFF------NPKEEVKLEAH 477
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---KPNV 300
+ VP+ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 478 IKVPSFAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTP--DENEEVIVKIIGHFFASQT 534
Query: 301 AKRALYEV 308
A+R + E+
Sbjct: 535 AQRKIREI 542
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 79/182 (43%), Gaps = 15/182 (8%)
Query: 363 PSTPWMGGYGDQPSR-MGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVK 421
P P G SR GS S P Q+ +F +++L +G +IGK G +K
Sbjct: 150 PPPPQRSRRGGHASREQGSSPGGSSQPKQL-----DFPLRMLVPTQFVGAIIGKEGLTIK 204
Query: 422 QL--QQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT 479
L Q ++ IH ++ +++ + + EG +D +Q + E
Sbjct: 205 NLTKQTQSKVDIHRKENAGAAEKPITIHATPEGCSEACRMILDI---MQKEADETKSAEE 261
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
I ++L +S VG ++G+ G + ++ + T I + LQD + E + ++GS
Sbjct: 262 IPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITI----SPLQDLTIYNPERTITVKGS 317
Query: 540 SE 541
+E
Sbjct: 318 TE 319
>gi|28317389|tpe|CAD29864.1| TPA: hnRNP-E2 b [Xenopus laevis]
Length = 319
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 84/332 (25%), Positives = 144/332 (43%), Gaps = 78/332 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
+A+ K II EED+ M + + +T RL+V
Sbjct: 66 ---------------------NAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLG--NSS 351
++ ++ ++P K +P PSS P QAY Q ++ P P + +H L S
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSH 220
Query: 352 WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGG 411
+P +S G SG I++ E++ + IG
Sbjct: 221 FPMSHSGNTGF-----------------SGGIDASAQATSHELTIPNDL--------IGC 255
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+IG+ G + +++Q +GA I + + S++R
Sbjct: 256 IIGRQGAKINEIRQMSGAQIKIANPVEGSNDR 287
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S ID + + + N T+ S K +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFSMIIDKLEEDISSSMTNSTA--SSKPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 38/232 (16%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSE 171
+SS S +S+P T+ R++ P+ + G +IGK G +K +RE T A++ VA D +P S
Sbjct: 84 SSSMTNSTASSKPPVTL-RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST 142
Query: 172 ERVIIIYSSPTKIAKTQNKDDDSAAET----------KKESMEP--------------HC 207
ER I I P I + + E+ K S P +
Sbjct: 143 ERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYA 202
Query: 208 AAQDALLKVHDRIIEEDLF-------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGD 260
Q L K+H +++ F G + D + L +PN+++GC++G++G
Sbjct: 203 IPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQATSHELTIPNDLIGCIIGRQGA 262
Query: 261 VIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
I +R +GA I++ P + D V I+G A Y ++ L
Sbjct: 263 KINEIRQMSGAQIKI-----ANPVEGSNDRQVTITGSTASISLAQYLINVRL 309
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEH 542
L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS+
Sbjct: 245 ELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSNDRQVTITGSTAS 297
Query: 543 L 543
+
Sbjct: 298 I 298
>gi|318054596|ref|NP_001188110.1| poly(rC)-binding protein 2 [Ictalurus punctatus]
gi|308322769|gb|ADO28522.1| poly(rc)-binding protein 2 [Ictalurus punctatus]
Length = 318
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 138/327 (42%), Gaps = 69/327 (21%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ ER+I + T I K
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTAIFK--- 70
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
A + D++ EED+ M++ +T R++VP +
Sbjct: 71 ----------------------AFSMIIDKL-EEDISSSMSNSTATSKPPVTLRIVVPAS 107
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + ++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGTPLSIIECVKQIC 163
Query: 310 TLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLGNSSWPARN 356
++ ++P K +P PS P QAY Q H+ P P + +H L P
Sbjct: 164 VVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP--- 220
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
P P G+ M + S ++ IG +IG+
Sbjct: 221 -----FPLAPSSQGF----------------TAGMDATTQTGSHELTIPNDLIGCIIGRQ 259
Query: 417 GFNVKQLQQETGASIHVEDAPTDSDER 443
G + +++Q +GA I + + S++R
Sbjct: 260 GAKINEIRQMSGAQIKIANPVEGSNDR 286
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 102/231 (44%), Gaps = 37/231 (16%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSE 171
+SS S S+P T+ RI+ P+ + G +IGK G +K +RE T A++ VA D +P S
Sbjct: 84 SSSMSNSTATSKPPVTL-RIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST 142
Query: 172 ERVIIIYSSPTKIAKTQNKDDDSAAET----------KKESMEP--------------HC 207
ER I I +P I + + E+ K S P H
Sbjct: 143 ERAITIAGTPLSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHA 202
Query: 208 AAQDALLKVHDRIIEEDLF------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV 261
Q L K+H +++ F G + D T + L +PN+++GC++G++G
Sbjct: 203 IPQPDLTKLHQLAMQQSPFPLAPSSQGFTAGMDATTQTGSHELTIPNDLIGCIIGRQGAK 262
Query: 262 IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
I +R +GA I++ P + D V I+G P A Y ++ L
Sbjct: 263 INEIRQMSGAQIKI-----ANPVEGSNDRQVTITGSPASISLAEYLINARL 308
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S ID + + + N T+ + K +T R++VP+S+ G ++G+GG I E+
Sbjct: 66 TAIFKAFSMIIDKLEEDISSSMSNSTA--TSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G+ +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGTPLSII 156
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 13/71 (18%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS
Sbjct: 244 ELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSNDRQVTITGSPAS 296
Query: 540 ---SEHLISAH 547
+E+LI+A
Sbjct: 297 ISLAEYLINAR 307
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|345320820|ref|XP_001521752.2| PREDICTED: poly(rC)-binding protein 3-like [Ornithorhynchus
anatinus]
Length = 261
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/259 (27%), Positives = 117/259 (45%), Gaps = 64/259 (24%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 221
Query: 346 --PLGNSS--WPARNSSLH 360
PLG ++ +P LH
Sbjct: 222 FTPLGQTTPAFPGEKLPLH 240
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++ +
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT 65
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + D I + N T+ + K +T RL+VP+S+ G ++G+GG I
Sbjct: 66 DAIFKAFAMIAYKFEE--DIINSMSNSTA--TSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 122 EIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAI 155
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 49
>gi|357146019|ref|XP_003573848.1| PREDICTED: KH domain-containing protein At4g18375-like
[Brachypodium distachyon]
Length = 470
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 91/190 (47%), Gaps = 18/190 (9%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +V+R++ K+GG+IG+ G ++ L EET+A++ V D G + I++ S
Sbjct: 84 PGASVFRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLDPADGVAGQQIVLIS----- 138
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
A E + + P A DA +K+ + E + + + +ARL
Sbjct: 139 ----------ATEETQAELAP---AMDAAIKIFKHVNEIEGINASVTFSASAPEICSARL 185
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP L+GK+G +I+ ++ TG+ IR++ D L M + +V+I G A A
Sbjct: 186 LVPKEQAAHLIGKQGIMIKSIQETTGSTIRIIDKDDLLNYRMVDERIVEILGASLKALNA 245
Query: 305 LYEVSTLLHQ 314
L V LL +
Sbjct: 246 LKSVLGLLRK 255
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 82/173 (47%), Gaps = 20/173 (11%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD--SDERVIRASAFEGLWNPR 457
+++ + K+GG+IG+ G +++L +ET A + V D P D + ++++ SA E
Sbjct: 89 FRLVVAGDKVGGLIGRRGETIRRLCEETRARVRVLD-PADGVAGQQIVLISATEETQAEL 147
Query: 458 SQTIDAILQLQNKTSEF-----------SEKGTITTRLLVPSSKVGCILGQGGHVINEMR 506
+ +DA +++ +E S + RLLVP + ++G+ G +I ++
Sbjct: 148 APAMDAAIKIFKHVNEIEGINASVTFSASAPEICSARLLVPKEQAAHLIGKQGIMIKSIQ 207
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS----EHLISAHGTYQSFMT 555
T + IR++ L + E IV+I G+S L S G + F+
Sbjct: 208 ETTGSTIRIIDKDDLLN--YRMVDERIVEILGASLKALNALKSVLGLLRKFLV 258
>gi|313226221|emb|CBY21364.1| unnamed protein product [Oikopleura dioica]
Length = 545
Score = 79.0 bits (193), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 94/415 (22%), Positives = 171/415 (41%), Gaps = 102/415 (24%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLRE--ETQAKITV-ADTIPGSEERVII 176
FG DT ++L P+ +G +IGK G+ V+ + + +++A++ V PGS+ +V
Sbjct: 172 FGARGSPDTPLKMLVPASVVGAIIGKGGSTVRQITQLKDSRARVDVHRREGPGSD-KVAT 230
Query: 177 IYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE 236
IY +P C A A +++ + + +E+ DNE
Sbjct: 231 IYGAPEA-----------------------CGA--AAIRILEIVRKEE--------KDNE 257
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
+ ++L N ++G L+G+ G ++ ++ +TG I + L P N D + I G
Sbjct: 258 ---LPLKVLAHNALIGRLIGRDGRNLKHVQDKTGTRIAISSMHELSP--YNMDRTISIHG 312
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQN---------FHSPPAPMADMHPL 347
+ A +++ L Q D S Y G N SP AP
Sbjct: 313 EVKGISEAEQQITEKLRQF-ETDMAAMSQQSLYPGLNSQQMQMFPGLQSPTAP------- 364
Query: 348 GNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAG 407
PA N S G S+ + + ++ +L +G
Sbjct: 365 -----PAYNVSYQGNSSSN----------------------------NTQETVTLLIPSG 391
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVE-------DAPTDSDERVIRASAFEGLWNPRSQT 460
+G +IG G +++ + + GASI + DA D+ RV E W +
Sbjct: 392 AVGAIIGSRGTHIRNISRIAGASIRIHALEGENADADRDAKARVTIVGVPESQWKAQFCI 451
Query: 461 IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
D +L+ + +E+G +TT++ +P VG I+G+GG + E++R T +++ +
Sbjct: 452 FD---KLKQEGWFGNEEGRLTTQITIPGKLVGRIIGKGGVNVRELQRITSSEVTI 503
>gi|348528761|ref|XP_003451884.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 317
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 135/330 (40%), Gaps = 76/330 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
A+ K II EED+ M + +T R++V
Sbjct: 66 ---------------------TAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGTPQSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLGNSSWP 353
++ ++ ++P K +P PS P QAY Q H+ P P + +H L P
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 354 ARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVI 413
P P G+ + + S P + IG +I
Sbjct: 221 --------FPIAPSNQGFTGMDASAQTSSHEMTIPNDL-----------------IGCII 255
Query: 414 GKGGFNVKQLQQETGASIHVEDAPTDSDER 443
G+ G + +++Q +GA I + + S +R
Sbjct: 256 GRQGAKINEIRQMSGAQIKIANPVDGSTDR 285
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S I+ + + + N T+ + K +T R++VP+S+ G ++G+GG I E+
Sbjct: 66 TAIFKAFSMIIEKLEEDISSSMTNSTA--TSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G+ + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGTPQSII 156
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 13/71 (18%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
+ +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS
Sbjct: 243 EMTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVDGSTDRQVTITGSPAS 295
Query: 540 ---SEHLISAH 547
+E+LI+A
Sbjct: 296 ISLAEYLINAR 306
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|134026176|gb|AAI35317.1| LOC733863 protein [Xenopus (Silurana) tropicalis]
Length = 475
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/352 (23%), Positives = 147/352 (41%), Gaps = 74/352 (21%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ GS I+ + PT
Sbjct: 20 RLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSCPERIVTITGPT-------- 68
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M + +T RL+VP
Sbjct: 69 --------------------DAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVVP 108
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 109 ASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQ 164
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
+ ++ ++P K +P P+S P + GGQ A H + PA ++
Sbjct: 165 ICVVMLESPPKGATIPYRPKPASGPIIFAGGQVRAETILASAGNHTVLAQPQPAPAFAIQ 224
Query: 361 GMPSTP---------------WMGGYGDQ----PSRMGSGSINSCPPGQMGEVSAEF--- 398
G + P +G +++ ++ P +G+ + F
Sbjct: 225 GQYAIPHPDVSSAHANYTLLFLFICFGQHLLSTLTKLHQLAMQHTPFTPLGQTTPGFPGL 284
Query: 399 -------SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
S ++ IG +IG+ G + +++Q +GA I + +A + ER
Sbjct: 285 DATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASEGNGER 336
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + ER++ +
Sbjct: 11 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT 68
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + I+A + S + K +T RL+VP+S+ G ++G+GG I
Sbjct: 69 DAIFKAFSMIALKFEEDINASM----TNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIK 124
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 125 EIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 159
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ +K N+S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 130
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 131 GAQVQVAGDMLPNSTERAVTISGTPDAI 158
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 5/80 (6%)
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
D + T + L +PN+++GC++G++G I +R +GA I++ A N + V
Sbjct: 285 DATSPTSSHELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANASE-----GNGERQVT 339
Query: 294 ISGKPNVAKRALYEVSTLLH 313
I+G P A Y ++ L
Sbjct: 340 ITGSPANISLAQYLINASLE 359
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 14 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 52
>gi|395839831|ref|XP_003792779.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Otolemur garnettii]
Length = 574
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 167/412 (40%), Gaps = 74/412 (17%)
Query: 113 NSSREQSFGNSQPA---DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIP 168
+SSREQ G S A D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS 233
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
G+ E+ + I+++P E A +L++ +
Sbjct: 234 GAAEKPVTIHATP----------------------EGTSEACRMILEIMQK--------- 262
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+D+ I ++L N +VG L+GK G ++++ ETG I + L N
Sbjct: 263 -EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNP 319
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG 348
+ + + G A E+ L + +F N + P ++ LG
Sbjct: 320 ERTITVKGTVEACANAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSALG 370
Query: 349 NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGK 408
S + L +P P G G P+ P E + +
Sbjct: 371 IFS-----TGLSVLP--PPSGPRGAPPA---------APYHPFAYPEQEI-VNLFIPTQA 413
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAILQ 466
+G +IGK G ++KQL + GASI + + P S+ VI E + + + +
Sbjct: 414 VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKL-- 471
Query: 467 LQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 472 ---KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 520
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 79/188 (42%), Gaps = 38/188 (20%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSSPTK 183
P + + P++ +G +IGK G +K L A I +A P ER++II P
Sbjct: 400 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 459
Query: 184 IAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR 243
K Q + + ++ EE+ F + E + A
Sbjct: 460 QFKAQGR-------------------------IFGKLKEENFF------NPKEEVKLEAH 488
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---KPNV 300
+ VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 489 IRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFASQT 545
Query: 301 AKRALYEV 308
A+R + E+
Sbjct: 546 AQRKIREI 553
>gi|148229933|ref|NP_001086212.1| MGC84166 protein [Xenopus laevis]
gi|49256273|gb|AAH74333.1| MGC84166 protein [Xenopus laevis]
Length = 225
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 104/225 (46%), Gaps = 44/225 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHP 346
+ ++ ++P K +P P+S P + G +S A HP
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASAPVIFAGGQAYSIQGQYAIPHP 206
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++ +
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT 65
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + D I + N T+ + K +T RL+VP+S+ G ++G+GG I
Sbjct: 66 DAIFKAFAMIAYKFEE--DIINSMSNSTA--TSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 122 EIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAI 155
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 49
>gi|449281891|gb|EMC88850.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 330
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 145/344 (42%), Gaps = 78/344 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK KSL Q+ + + ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISEGNCPERIVTI-TGPT-------- 67
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 68 --------------------DAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVP 107
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 108 ASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQ 163
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 164 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 223
Query: 346 --PLGNSS--WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG ++ +P LH + G S +++ PP E++ +
Sbjct: 224 FTPLGQTTPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 274
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 275 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 311
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 60/266 (22%), Positives = 105/266 (39%), Gaps = 64/266 (24%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 71 FKAFAMIAYKFEEDITNSMSNSTATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 129
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 130 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 189
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG--------------------- 227
A + + PH D L K+H +++ F
Sbjct: 190 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFTPLGQTTPAFPGEKLPLHSSEE 246
Query: 228 -----GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
G +S D T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 247 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 304
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEV 308
+++ + I+G P A Y +
Sbjct: 305 ---GSSERQITITGTPANISLAQYLI 327
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 78/165 (47%), Gaps = 26/165 (15%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL--QQETGASIHVEDAPTDSDERVIRASA 449
G ++ ++++L ++G +IGK + K L ++GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKVRMSFKSLPFSFQSGARINISEG--NCPERIVT--- 62
Query: 450 FEGLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGG 499
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 63 ---ITGPTDAIFKAFAMIAYKFEEDITNSMSNSTATSKPPVTLRLVVPASQCGSLIGKGG 119
Query: 500 HVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 120 SKIKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 158
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 13/73 (17%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS- 539
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 265 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 317
Query: 540 -----SEHLISAH 547
+++LI+A
Sbjct: 318 ANISLAQYLINAR 330
>gi|349576607|dbj|GAA21778.1| K7_Pbp2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 413
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 161/372 (43%), Gaps = 71/372 (19%)
Query: 104 VGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
V +K + S+S + ++ P+D R+LC + ++G G + ++ ET A+I +
Sbjct: 44 VALKDAD-SHSDNDHDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINI 102
Query: 164 ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE 223
++ I G ER++ + + +AK + ALL+ H
Sbjct: 103 SNNIRGVPERIVYVRGTCDDVAKA------------------YGMIVRALLEEH------ 138
Query: 224 DLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP 283
++D+ E+ I+ LL+P++++GC++GKRG ++ + + A + P L
Sbjct: 139 ------GNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL-- 190
Query: 284 CAMNTDEMVQISGKPNVAKRALYEVS-TLLH---QNPRKDKPPSSFPQAYGGQNF---HS 336
++ D ++ I+G P+ A + +S TLL+ ++P+K+ S + Q + HS
Sbjct: 191 --LSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHS 248
Query: 337 PPAPM-----ADMHPLGN--SSWPARN----SSLHGMPSTPWM-----GGYGDQPS---- 376
P + HP S P +N S+L M + + QP+
Sbjct: 249 QPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQPNFVIP 308
Query: 377 --RMGSGSINSCPPGQ---MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASI 431
+ G + S PG M V E I +G VIGK G ++ +++ TG SI
Sbjct: 309 NVTVLDGPVISPAPGNHLLMNFVQQE----IFIDEKFVGNVIGKDGKHINSVKESTGCSI 364
Query: 432 HVEDAPTDSDER 443
++D S ER
Sbjct: 365 IIQDPVEGSSER 376
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF-EG 452
V ++ +++LC ++G G + +++ ET A I++ + ER++ +
Sbjct: 63 VPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDD 122
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ + A+L+ ++ + E I+ LL+P +GCI+G+ G + E+ + A
Sbjct: 123 VAKAYGMIVRALLE-EHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAK 181
Query: 513 I 513
+
Sbjct: 182 L 182
>gi|417399108|gb|JAA46584.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 333
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 84/338 (24%), Positives = 143/338 (42%), Gaps = 77/338 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKDKP----------PSSFP------QAYGGQNFHSPPAP-MADMHPLG-- 348
+ ++ + + P PSS P QAY Q ++ P P + +H L
Sbjct: 162 ICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQ 221
Query: 349 NSSWPAR--NSSLHGMP-STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCS 405
S +P N+ G+ S+P + GY + S + + ++
Sbjct: 222 QSHFPMTHGNTGFSGIESSSPEVKGYWASL-----------------DASTQTTHELTIP 264
Query: 406 AGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
IG +IG+ G N+ +++Q +GA I + + S R
Sbjct: 265 NNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGR 302
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 123/259 (47%), Gaps = 25/259 (9%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPS 565
R T A ++V G D P S+E + I G + +I Q + +++ P
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSIIEC--VKQICVVMLETLSQSPP 175
Query: 566 SYQNI--NPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSYPM-HTH 622
I P+ SS + + +Y T Q Y + + QQS +PM H +
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQAY----TIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGN 231
Query: 623 QGAGTNPHITPTQSSYYSS 641
G +P Y++S
Sbjct: 232 TGFSGIESSSPEVKGYWAS 250
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 258 THELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSA 310
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 311 ASISLAQYLINARLSSEKGM 330
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|398365639|ref|NP_009792.3| Pbp2p [Saccharomyces cerevisiae S288c]
gi|586350|sp|P38151.1|PBP2_YEAST RecName: Full=PAB1-binding protein 2
gi|536633|emb|CAA85196.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151946618|gb|EDN64840.1| pbp1p binding protein [Saccharomyces cerevisiae YJM789]
gi|190408618|gb|EDV11883.1| PAB1-binding protein 2 [Saccharomyces cerevisiae RM11-1a]
gi|207347516|gb|EDZ73659.1| YBR233Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256272922|gb|EEU07890.1| Pbp2p [Saccharomyces cerevisiae JAY291]
gi|285810563|tpg|DAA07348.1| TPA: Pbp2p [Saccharomyces cerevisiae S288c]
gi|323310022|gb|EGA63217.1| Pbp2p [Saccharomyces cerevisiae FostersO]
gi|323334658|gb|EGA76032.1| Pbp2p [Saccharomyces cerevisiae AWRI796]
gi|323338741|gb|EGA79957.1| Pbp2p [Saccharomyces cerevisiae Vin13]
gi|323349811|gb|EGA84026.1| Pbp2p [Saccharomyces cerevisiae Lalvin QA23]
gi|323356159|gb|EGA87964.1| Pbp2p [Saccharomyces cerevisiae VL3]
gi|392301080|gb|EIW12169.1| Pbp2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 413
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 161/372 (43%), Gaps = 71/372 (19%)
Query: 104 VGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
V +K + S+S + ++ P+D R+LC + ++G G + ++ ET A+I +
Sbjct: 44 VALKDAD-SHSDNDHDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINI 102
Query: 164 ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE 223
++ I G ER++ + + +AK + ALL+ H
Sbjct: 103 SNNIRGVPERIVYVRGTCDDVAKA------------------YGMIVRALLEEH------ 138
Query: 224 DLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP 283
++D+ E+ I+ LL+P++++GC++GKRG ++ + + A + P L
Sbjct: 139 ------GNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL-- 190
Query: 284 CAMNTDEMVQISGKPNVAKRALYEVS-TLLH---QNPRKDKPPSSFPQAYGGQNF---HS 336
++ D ++ I+G P+ A + +S TLL+ ++P+K+ S + Q + HS
Sbjct: 191 --LSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHS 248
Query: 337 PPAPM-----ADMHPLGN--SSWPARN----SSLHGMPSTPWM-----GGYGDQPS---- 376
P + HP S P +N S+L M + + QP+
Sbjct: 249 QPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQPNFVIP 308
Query: 377 --RMGSGSINSCPPGQ---MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASI 431
+ G + S PG M V E I +G VIGK G ++ +++ TG SI
Sbjct: 309 NVTVLDGPVISPAPGNHLLMNFVQQE----IFIDEKFVGNVIGKDGKHINSVKESTGCSI 364
Query: 432 HVEDAPTDSDER 443
++D S ER
Sbjct: 365 IIQDPVEGSSER 376
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF-EG 452
V ++ +++LC ++G G + +++ ET A I++ + ER++ +
Sbjct: 63 VPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDD 122
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ + A+L+ ++ + E I+ LL+P +GCI+G+ G + E+ + A
Sbjct: 123 VAKAYGMIVRALLE-EHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAK 181
Query: 513 I 513
+
Sbjct: 182 L 182
>gi|392347468|ref|XP_003749842.1| PREDICTED: poly(rC)-binding protein 1 [Rattus norvegicus]
Length = 516
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 175/439 (39%), Gaps = 111/439 (25%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 177 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 225
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 226 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 265
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 266 ATQCGSLIGKGGCKIKEIRESTGAQVQVA-GDMLP---NSTERAITIAGVPQSVTECVKQ 321
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST-- 365
+ ++ + + Q+ G+ P PM P+ + R S G P
Sbjct: 322 ICLVMLE---------TLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 372
Query: 366 ----PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVK 421
P + Y Q G +I+ ++ +V+ + S + G GF
Sbjct: 373 DLEGPPLDAYSIQ----GQHTISPLDLAKLNQVARQQSHFAMMHGGT--------GF--- 417
Query: 422 QLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
A DS ++ G W ++DA Q T
Sbjct: 418 --------------AGIDSSSPEVK-----GYW----ASLDASTQ-------------TT 441
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSE 541
L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 442 HELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSAA 494
Query: 542 HLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 495 SISLAQYLINARLSSEKGM 513
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 83/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 170 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 227
Query: 453 LWNPRSQTIDAILQLQNKT---SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 228 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 287
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 288 GAQVQVAG------DMLPNSTERAITIAG 310
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 171 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 209
>gi|148229563|ref|NP_001079932.1| insulin-like growth factor 2 mRNA-binding protein 3-B [Xenopus
laevis]
gi|82227771|sp|O57526.1|IF23B_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-B; Short=IGF2 mRNA-binding protein 3-B; Short=IMP-3-B;
AltName: Full=69 kDa RNA-binding protein B; AltName:
Full=B3.65 protein B; AltName: Full=IGF-II mRNA-binding
protein 3-B; AltName: Full=KH domain-containing
transcription factor B3-B; AltName: Full=RNA-binding
protein Vera-B; AltName: Full=Trans-acting factor B3-B;
AltName: Full=VICKZ family member 3-B; AltName:
Full=VLE-binding protein B; AltName: Full=Vg1
RNA-binding protein B; Short=Vg1 RBP-B; AltName:
Full=Vg1 localization element binding protein B;
AltName: Full=VgLE-binding and ER association protein B
gi|2801766|gb|AAB97457.1| KH domain-containing transcription factor B3 [Xenopus laevis]
gi|3172447|gb|AAC18597.1| Vg1 RNA binding protein variant A [Xenopus laevis]
gi|35505483|gb|AAH57700.1| MGC68429 protein [Xenopus laevis]
Length = 593
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 159/393 (40%), Gaps = 73/393 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L P++ +G +IGK G ++++ ++TQ+KI + G+ E+ I I+S+P
Sbjct: 208 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTP-------- 259
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
E C K+ I++++ + D I ++L NN
Sbjct: 260 -----------EGCSAAC-------KIIMEIMQKE------AQDTKFTEEIPLKILAHNN 295
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VG L+GK G ++++ +T I + P L N + + + G +A EV
Sbjct: 296 FVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIETCAKAEEEVM 353
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG--NSSWPARNSSLHGMPSTPW 367
+ + S+ N + P +++ LG S G+ S
Sbjct: 354 KKIRE---------SYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGMPPPSAGVSSPTT 404
Query: 368 MGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQET 427
Y PP G+ ++ + A +G +IGK G ++KQL +
Sbjct: 405 SASY---------------PP--FGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFA 447
Query: 428 GASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EKGTITT 482
GASI + AP + + +R G P A ++ K E + E+ +
Sbjct: 448 GASIKI--APAEGPDAKLRMVIITG---PPEAQFKAQGRIYGKLKEENFFGPKEEVKLEA 502
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ VPS G ++G+GG +NE++ T A++ V
Sbjct: 503 HIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVV 535
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 39/193 (20%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIY 178
FG ++TV+ + P+ +G +IGK G +K L A I +A P ++ R++II
Sbjct: 411 FGQQPESETVH-LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 469
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
P K Q +++ ++ EE+ FG E
Sbjct: 470 GPPEAQFKAQG-------------------------RIYGKLKEENFFG------PKEEV 498
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-- 296
+ A + VP+ G ++GK G + L++ T A + V+P D+ P N +V+I+G
Sbjct: 499 KLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 555
Query: 297 -KPNVAKRALYEV 308
+A+R + E+
Sbjct: 556 YASQLAQRKIQEI 568
>gi|328778258|ref|XP_391921.3| PREDICTED: poly(rC)-binding protein 3-like [Apis mellifera]
Length = 466
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 148/331 (44%), Gaps = 49/331 (14%)
Query: 122 NSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYS 179
N P+ T+ R++ +++G +IGK G IVK REE+ AKI ++D GS ER++ +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTG 67
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
I K A + E C+ + HD +
Sbjct: 68 PTNSIFK--------AFTLICKKFEEWCS------QFHD----------IQGSGGVPRPP 103
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
IT RL+VP + G L+GK G I+ +R TGA+I+V +D LP +T+ V ISG
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA-SDMLP---NSTERAVTISGTSE 159
Query: 300 VAKRALYEVSTLLHQNPRKD-------KPPSSFP------QAYGGQNFHSPPAPMADMHP 346
+ +Y + ++ ++P K KP P QAY Q ++ PA +DM
Sbjct: 160 AITQCIYHICCVMLESPPKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPA-HSDMGK 218
Query: 347 LGNSSWPARNSSLHGMPSTPW-MGGYGDQPSRMGSGS-INSCPPGQMGEVSAEFSMKILC 404
LG++ + G +TP GG +GS + + + + + ++
Sbjct: 219 LGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMTV 278
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
IG +IGKGG + +++Q +GA I + +
Sbjct: 279 PNELIGCIIGKGGTKIAEIRQISGAMIRISN 309
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 26/161 (16%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G VK+ ++E+GA I++ D ER++ +
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG----- 67
Query: 455 NPRSQTIDAILQLQNKTSEFSE------------KGTITTRLLVPSSKVGCILGQGGHVI 502
P + A + K E+ + IT RL+VP+S+ G ++G+GG I
Sbjct: 68 -PTNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 503 NEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
E+R T A I+V D P S+E V I G+SE +
Sbjct: 127 KEIREVTGASIQVA------SDMLPNSTERAVTISGTSEAI 161
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + VPN ++GC++GK G I +R +GA IR+ + A TD + I+G P+
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 330
Query: 301 AKRALYEVS 309
A Y +S
Sbjct: 331 VSLAQYLIS 339
Score = 42.4 bits (98), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSRE-QSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSL 153
N+ FK ++ K W + + Q G R++ P+ + G +IGK G+ +K +
Sbjct: 70 NSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEI 129
Query: 154 REETQAKITVA-DTIPGSEERVIIIYSSPTKIAK 186
RE T A I VA D +P S ER + I + I +
Sbjct: 130 REVTGASIQVASDMLPNSTERAVTISGTSEAITQ 163
>gi|432857624|ref|XP_004068722.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 317
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 135/330 (40%), Gaps = 76/330 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
A+ K II EED+ M + +T R++V
Sbjct: 66 ---------------------TAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGTPQSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLGNSSWP 353
++ ++ ++P K +P PS P QAY Q H+ P P + +H L P
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 354 ARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVI 413
P P G+ + + S P + IG +I
Sbjct: 221 --------FPIAPSNQGFTGIDASAQTSSHEMTIPNDL-----------------IGCII 255
Query: 414 GKGGFNVKQLQQETGASIHVEDAPTDSDER 443
G+ G + +++Q +GA I + + S +R
Sbjct: 256 GRQGAKINEIRQMSGAQIKIANPVDGSTDR 285
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S I+ + + + N T+ + K +T R++VP+S+ G ++G+GG I E+
Sbjct: 66 TAIFKAFSMIIEKLEEDISSSMTNSTA--TSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G+ + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGTPQSII 156
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 13/71 (18%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
+ +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS
Sbjct: 243 EMTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVDGSTDRQVTITGSPAS 295
Query: 540 ---SEHLISAH 547
+E+LI+A
Sbjct: 296 ISLAEYLINAR 306
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|350405177|ref|XP_003487350.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus impatiens]
Length = 466
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 148/331 (44%), Gaps = 49/331 (14%)
Query: 122 NSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYS 179
N P+ T+ R++ +++G +IGK G IVK REE+ AKI ++D GS ER++ +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTG 67
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
I K A + E C+ + HD +
Sbjct: 68 PTNSIFK--------AFTLICKKFEEWCS------QFHD----------IQGSGGVPRPP 103
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
IT RL+VP + G L+GK G I+ +R TGA+I+V +D LP +T+ V ISG
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA-SDMLP---NSTERAVTISGTSE 159
Query: 300 VAKRALYEVSTLLHQNPRKD-------KPPSSFP------QAYGGQNFHSPPAPMADMHP 346
+ +Y + ++ ++P K KP P QAY Q ++ PA +DM
Sbjct: 160 AITQCIYHICCVMLESPPKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPA-HSDMGK 218
Query: 347 LGNSSWPARNSSLHGMPSTPW-MGGYGDQPSRMGSGS-INSCPPGQMGEVSAEFSMKILC 404
LG++ + G +TP GG +GS + + + + + ++
Sbjct: 219 LGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMTV 278
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
IG +IGKGG + +++Q +GA I + +
Sbjct: 279 PNELIGCIIGKGGTKIAEIRQISGAMIRISN 309
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 26/161 (16%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G VK+ ++E+GA I++ D ER++ +
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG----- 67
Query: 455 NPRSQTIDAILQLQNKTSEFSE------------KGTITTRLLVPSSKVGCILGQGGHVI 502
P + A + K E+ + IT RL+VP+S+ G ++G+GG I
Sbjct: 68 -PTNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 503 NEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
E+R T A I+V D P S+E V I G+SE +
Sbjct: 127 KEIREVTGASIQVA------SDMLPNSTERAVTISGTSEAI 161
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + VPN ++GC++GK G I +R +GA IR+ + A TD + I+G P+
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 330
Query: 301 AKRALYEVS 309
A Y +S
Sbjct: 331 VALAQYLIS 339
>gi|443687982|gb|ELT90806.1| hypothetical protein CAPTEDRAFT_1308 [Capitella teleta]
Length = 333
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 87/350 (24%), Positives = 150/350 (42%), Gaps = 77/350 (22%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R++ ++ G +IGK G+ VK RE++ AKI ++D+ ER++ + + +I K
Sbjct: 4 LRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISDS--SCPERIVTVTGTTDQIFKA-- 59
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST------ITAR 243
+ + EED+ + NST +T R
Sbjct: 60 ------------------------FTMICKKFEEDIV-------NTHNSTTLPKPPVTLR 88
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
L+VP + G L+GK G I+ +R TGA+I+V ++ LP +T+ V +SG+ + +
Sbjct: 89 LIVPASQCGSLIGKGGAKIKEIRELTGASIQVA-SEMLP---NSTERAVTVSGQADAITQ 144
Query: 304 ALYEVSTLLHQNPRKDK----------PPSSFPQAYGGQNF-----------HSPPAPMA 342
+Y + ++ ++P K PP P + GGQ F P A
Sbjct: 145 CIYNICCVMLESPPKGATIPYRPKPCVPPVMLPSSCGGQAFSIQGQQILLPPSHPNATQP 204
Query: 343 DMHPLGNSSWPARNSSL------HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMG---E 393
D+ P P SL H + Y + M +G I P Q G
Sbjct: 205 DVSPHCVPLPPPCFISLRARLQTHSLICIIIRDVYPGMNAAMAAG-IPQFAPRQAGPGAN 263
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+SA+ + ++ IG +IG+GG + +++Q +GA+I + +A S +R
Sbjct: 264 MSAQ-THEMTIPNDLIGCIIGRGGAKINEIRQLSGATIKIANADEGSSDR 312
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 79/151 (52%), Gaps = 15/151 (9%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-----FEG 452
+++++ + G +IGK G NVK+ ++++GA I++ D + ER++ + F+
Sbjct: 2 VTLRMIMQGKEAGSIIGKKGDNVKKFREDSGAKINISD--SSCPERIVTVTGTTDQIFKA 59
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ + I+ N T+ K +T RL+VP+S+ G ++G+GG I E+R T A
Sbjct: 60 FTMICKKFEEDIVNTHNSTT--LPKPPVTLRLIVPASQCGSLIGKGGAKIKEIRELTGAS 117
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
I+V + P S+E V + G ++ +
Sbjct: 118 IQVASEML------PNSTERAVTVSGQADAI 142
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 57/250 (22%), Positives = 92/250 (36%), Gaps = 75/250 (30%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVI------------- 175
R++ P+ + G +IGK G +K +RE T A I VA + +P S ER +
Sbjct: 87 LRLIVPASQCGSLIGKGGAKIKEIRELTGASIQVASEMLPNSTERAVTVSGQADAITQCI 146
Query: 176 -----IIYSSPTK---------------------------IAKTQNKDDDSAAETKKESM 203
++ SP K I Q S + +
Sbjct: 147 YNICCVMLESPPKGATIPYRPKPCVPPVMLPSSCGGQAFSIQGQQILLPPSHPNATQPDV 206
Query: 204 EPHCA--------AQDALLKVHDRI--IEEDLFGGM--------------ASDDDNENST 239
PHC + A L+ H I I D++ GM + S
Sbjct: 207 SPHCVPLPPPCFISLRARLQTHSLICIIIRDVYPGMNAAMAAGIPQFAPRQAGPGANMSA 266
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
T + +PN+++GC++G+ G I +R +GA I++ AD ++D V I G
Sbjct: 267 QTHEMTIPNDLIGCIIGRGGAKINEIRQLSGATIKIANADE-----GSSDRKVTIMGSLE 321
Query: 300 VAKRALYEVS 309
A Y ++
Sbjct: 322 TIHAAQYMIN 331
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +P+ +GCI+G+GG INE+R+ + GA +K+ + GSS+ V I GS
Sbjct: 268 THEMTIPNDLIGCIIGRGGAKINEIRQLS-------GATIKIANADEGSSDRKVTIMGSL 320
Query: 541 EHLISAH 547
E + +A
Sbjct: 321 ETIHAAQ 327
>gi|383862493|ref|XP_003706718.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Megachile
rotundata]
Length = 466
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 149/331 (45%), Gaps = 49/331 (14%)
Query: 122 NSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYS 179
N P+ T+ R++ +++G +IGK G IVK REE+ AKI ++D GS ER++ +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTG 67
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
I K A + E C+ + HD + S
Sbjct: 68 PTNSIFK--------AFTLICKKFEEWCS------QFHD----------IQSGGGVPRPP 103
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
IT RL+VP + G L+GK G I+ +R TGA+I+V ++ LP +T+ V ISG
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTISGTSE 159
Query: 300 VAKRALYEVSTLLHQNPRKD-------KPPSSFP------QAYGGQNFHSPPAPMADMHP 346
+ +Y + ++ ++P K KP P QAY Q ++ PA +DM
Sbjct: 160 AITQCIYHICCVMLESPPKGATIPYRPKPQVGGPLILAGGQAYTIQGNYAVPA-HSDMGK 218
Query: 347 LGNSSWPARNSSLHGMPSTPW-MGGYGDQPSRMGSGS-INSCPPGQMGEVSAEFSMKILC 404
LG++ + G +TP GG +GS + + + + + ++
Sbjct: 219 LGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMTV 278
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
IG +IGKGG + +++Q +GA I + +
Sbjct: 279 PNELIGCIIGKGGTKIAEIRQISGAMIRISN 309
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 26/161 (16%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G VK+ ++E+GA I++ D ER++ +
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG----- 67
Query: 455 NPRSQTIDAILQLQNKTSEFSE------------KGTITTRLLVPSSKVGCILGQGGHVI 502
P + A + K E+ + IT RL+VP+S+ G ++G+GG I
Sbjct: 68 -PTNSIFKAFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 503 NEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
E+R T A I+V + P S+E V I G+SE +
Sbjct: 127 KEIREVTGASIQVASEML------PNSTERAVTISGTSEAI 161
Score = 46.2 bits (108), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 51/118 (43%), Gaps = 13/118 (11%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + VPN ++GC++GK G I +R +GA IR+ + A TD + I+G P+
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 330
Query: 301 AKRALYEVSTLLH-----------QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPL 347
A Y +S + Q P P + + N + +P+A PL
Sbjct: 331 VALAQYLISMSVELQKANLEAQNTQTPGSGTTPGATGASASPSNTTTTASPLASAIPL 388
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSL 153
N+ FK ++ K W + + G P + R++ P+ + G +IGK G+ +K +
Sbjct: 70 NSIFKAFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEI 129
Query: 154 REETQAKITVA-DTIPGSEERVIIIYSSPTKIAK 186
RE T A I VA + +P S ER + I + I +
Sbjct: 130 REVTGASIQVASEMLPNSTERAVTISGTSEAITQ 163
>gi|63115359|gb|AAY33858.1| KH domain-containing protein [Betula platyphylla]
Length = 166
Score = 77.4 bits (189), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/77 (50%), Positives = 50/77 (64%)
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+ T RLLVP + +GCL+GK G ++ +R T ANIR+L + LP A DEMVQISG
Sbjct: 5 SFTTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRILSKENLPKVASEDDEMVQISGDL 64
Query: 299 NVAKRALYEVSTLLHQN 315
+VAK AL +V T L N
Sbjct: 65 DVAKDALMQVVTRLRAN 81
Score = 56.2 bits (134), Expect = 5e-05, Method: Composition-based stats.
Identities = 21/38 (55%), Positives = 34/38 (89%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ TTRLLVP+S++GC++G+GG ++ EMRR T+A+IR++
Sbjct: 5 SFTTRLLVPTSRIGCLIGKGGAIVTEMRRLTKANIRIL 42
>gi|317418810|emb|CBN80848.1| PolyrC-binding protein 2 [Dicentrarchus labrax]
Length = 306
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 81/330 (24%), Positives = 137/330 (41%), Gaps = 76/330 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
A+ K II EED+ M + +T R++V
Sbjct: 66 ---------------------TAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGTPQSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLGNSSWP 353
++ ++ ++P K +P PS P QAY Q H+ P P + +H L P
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 354 ARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVI 413
+ PS G I++ E++ + IG +I
Sbjct: 221 -----------------FPIAPSNQGFTGIDASAQTSSHEMTIPNDL--------IGCII 255
Query: 414 GKGGFNVKQLQQETGASIHVEDAPTDSDER 443
G+ G + +++Q +GA I + + S +R
Sbjct: 256 GRQGAKINEIRQMSGAQIKIANPVDGSTDR 285
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S I+ + + + N T+ + K +T R++VP+S+ G ++G+GG I E+
Sbjct: 66 TAIFKAFSMIIEKLEEDISSSMTNSTA--TSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G+ + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGTPQSII 156
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 13/71 (18%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
+ +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS
Sbjct: 243 EMTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVDGSTDRQVTITGSPAS 295
Query: 540 ---SEHLISAH 547
+E+LI+A
Sbjct: 296 ISLAEYLINAR 306
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|281354032|gb|EFB29616.1| hypothetical protein PANDA_003725 [Ailuropoda melanoleuca]
Length = 434
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 99/422 (23%), Positives = 172/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 39 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 98
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E A +L++ +
Sbjct: 99 NSGAAEKPVTIHATP----------------------EGTSEACRMILEIMQK------- 129
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 130 ---EADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 184
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 185 NPERTITVKGTVEACANAEVEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 235
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + G P Y P SG +S PP Q G S
Sbjct: 236 LGIFSTGLSVLPPPAGPRGAPPAPPY--HPFATHSGYFSSLYPPHQFGPFPHHHSYPEQE 293
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 294 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 353
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 354 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 408
Query: 514 RV 515
V
Sbjct: 409 IV 410
>gi|365761950|gb|EHN03570.1| Pbp2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 416
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 82/368 (22%), Positives = 150/368 (40%), Gaps = 80/368 (21%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEE 172
+S E+ F ++ P+ R+LC + ++G G + ++ ET A+I V++ I G E
Sbjct: 55 HSDNERDFTDNLPSHVHLRMLCLVKHASLIVGHKGATISRIKSETSARINVSNNIRGVPE 114
Query: 173 RVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASD 232
R+I + + +AK +I L ++
Sbjct: 115 RIIYVRGTCDDVAKAYG------------------------------MIVRALLEEHENE 144
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
+ E+ ++ LL+P++++GC++GKRG ++ + + A + P L ++ D ++
Sbjct: 145 SEEEDIEVSINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL----LSNDRIL 200
Query: 293 QISGKPNVAKRALYEV-STLLH---QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG 348
ISG P+ A + V TLL+ ++P+K S F Y F+S + D H
Sbjct: 201 TISGVPDAIHIATFYVGQTLLNFQIESPQKKLKRSIF---YQPTQFNS---VLLD-HSQS 253
Query: 349 NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPP-------------------- 388
N+ RN H P+ + ++ + S ++ PP
Sbjct: 254 NAVLHQRNHQYH--PNDKLLSCRPNRKFSVSSTLLSMAPPQYTTASVANATAFHPNFVIP 311
Query: 389 ------------GQMGEVSAE-FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
G +S F +I +G VIGK G ++ +++ TG SI V+D
Sbjct: 312 NVRILDAPVIDQGPSNHLSMNLFQQEIFIDENFVGNVIGKDGKHINSVKESTGCSIIVQD 371
Query: 436 APTDSDER 443
+ S ER
Sbjct: 372 SAEGSSER 379
>gi|148226749|ref|NP_001081752.1| insulin-like growth factor 2 mRNA-binding protein 3-A [Xenopus
laevis]
gi|82227951|sp|O73932.1|IF23A_XENLA RecName: Full=Insulin-like growth factor 2 mRNA-binding protein
3-A; Short=IGF2 mRNA-binding protein 3-A; Short=IMP-3-A;
AltName: Full=69 kDa RNA-binding protein A; AltName:
Full=IGF-II mRNA-binding protein 3-A; AltName: Full=KH
domain-containing transcription factor B3-A; AltName:
Full=RNA-binding protein Vera-A; AltName:
Full=Trans-acting factor B3-A; AltName: Full=VICKZ
family member 3-A; AltName: Full=VLE-binding protein A;
AltName: Full=Vg1 RNA-binding protein A; Short=Vg1
RBP-A; AltName: Full=Vg1 localization element binding
protein A; AltName: Full=VgLE-binding and ER association
protein A
gi|3136158|gb|AAC41285.1| RNA binding protein Vera [Xenopus laevis]
gi|3172449|gb|AAC18598.1| Vg1 RNA binding protein variant D [Xenopus laevis]
gi|213623978|gb|AAI70477.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213623980|gb|AAI70479.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213625273|gb|AAI70224.1| Vg1 RNA binding protein Vera [Xenopus laevis]
gi|213626044|gb|AAI70196.1| Vg1 RNA binding protein Vera [Xenopus laevis]
Length = 594
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 159/391 (40%), Gaps = 69/391 (17%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L P++ +G +IGK G ++++ ++TQ+KI + G+ E+ I I+S+P
Sbjct: 209 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTP-------- 260
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
E AA ++++ + + D I ++L NN
Sbjct: 261 --------------EGCSAACKIIMEIMQK----------EAQDTKFTEEIPLKILAHNN 296
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VG L+GK G ++++ +T I + P L N + + + G +A E+
Sbjct: 297 FVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIEPCAKAEEEIM 354
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMG 369
+ + S+ N + P +++ LG + + G
Sbjct: 355 KKIRE---------SYENDIAAMNLQAHLIPGLNLNALG-------------LFPSSSSG 392
Query: 370 GYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGA 429
S S PP G+ ++ + A +G +IGK G ++KQL + GA
Sbjct: 393 MPPPSVGVPSPTSSTSYPP--FGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGA 450
Query: 430 SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EKGTITTRL 484
SI + AP + + +R G P A ++ K E + E+ + T +
Sbjct: 451 SIKI--APAEGPDAKLRMVIITG---PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHI 505
Query: 485 LVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
VPS G ++G+GG +NE++ T A++ V
Sbjct: 506 KVPSYAAGRVIGKGGKTVNELQNLTSAEVVV 536
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 39/193 (20%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIY 178
FG ++TV+ + P+ +G +IGK G +K L A I +A P ++ R++II
Sbjct: 412 FGQQPESETVH-LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 470
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
P K Q +++ ++ EE+ FG E
Sbjct: 471 GPPEAQFKAQG-------------------------RIYGKLKEENFFG------PKEEV 499
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-- 296
+ + VP+ G ++GK G + L++ T A + V+P D+ P N + +V+I+G
Sbjct: 500 KLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDEVVVKITGHF 556
Query: 297 -KPNVAKRALYEV 308
+A+R + E+
Sbjct: 557 YASQLAQRKIQEI 569
>gi|392340090|ref|XP_002726454.2| PREDICTED: poly(rC)-binding protein 1, partial [Rattus norvegicus]
Length = 365
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 175/439 (39%), Gaps = 111/439 (25%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 26 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 74
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 75 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 114
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 115 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 170
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST-- 365
+ ++ + + Q+ G+ P PM P+ + R S G P
Sbjct: 171 ICLVMLE---------TLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 221
Query: 366 ----PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVK 421
P + Y Q G +I+ ++ +V+ + S + G GF
Sbjct: 222 DLEGPPLDAYSIQ----GQHTISPLDLAKLNQVARQQSHFAMMHGGT--------GF--- 266
Query: 422 QLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
A DS ++ G W ++DA Q T
Sbjct: 267 --------------AGIDSSSPEVK-----GYW----ASLDASTQ-------------TT 290
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSE 541
L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 291 HELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSAA 343
Query: 542 HLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 344 SISLAQYLINARLSSEKGM 362
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 83/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 19 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 76
Query: 453 LWNPRSQTIDAILQLQNKT---SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 77 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 136
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 137 GAQVQVAG------DMLPNSTERAITIAG 159
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 20 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 58
>gi|390458234|ref|XP_003732080.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
Length = 349
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 170/422 (40%), Gaps = 111/422 (26%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T++ + I+G P + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRKSTGAQVQV-AGDMLPN---STEQAITIAGMPQSVTECVKQ 161
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST-- 365
+ ++ + + Q+ G+ P PM P+ + R S+ G P
Sbjct: 162 ICLVMLE---------TISQSPQGRVMTIPYQPMPASSPVICAGGQDRYSNTAGYPHATH 212
Query: 366 ----PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVK 421
P + Y Q G +I+ + +V+ + S + G GF
Sbjct: 213 DLEGPPLDAYSIQ----GQHTISPLHLANLNQVARQQSHFAMMHGGT--------GF--- 257
Query: 422 QLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
A DS+ ++ G W ++DA Q T
Sbjct: 258 --------------AGIDSNSPEVK-----GYW----ASLDASTQ-------------TT 281
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSE 541
L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 282 HELTIPNNLIGCIIGRQGTNINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSAA 334
Query: 542 HL 543
+
Sbjct: 335 SI 336
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 83/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + +T RL+VP+++ G ++G+GG I E+R+ T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRKST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTEQAITIAG 150
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
>gi|198425067|ref|XP_002127946.1| PREDICTED: similar to insulin-like growth factor 2 mRNA binding
protein 1 [Ciona intestinalis]
Length = 601
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 94/405 (23%), Positives = 168/405 (41%), Gaps = 76/405 (18%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKIA 185
D R+L PS+ +G +IGK G+ ++++ ++T A+I V PG+ E+ I I +P
Sbjct: 193 DLPTRMLVPSQYVGAIIGKGGDSIRAITQKTHARIDVHRKDNPGATEKAITINGTP---- 248
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLK-VHDRIIEEDLFGGMASDDDNENSTITARL 244
E AA A+L V D G +DDD I ++
Sbjct: 249 ------------------EACGAAVGAILDIVRDEDRNARQAAGTWNDDD-----IPLKI 285
Query: 245 LVPNNMVGCLLGKRGDVIQRLR---------SETGANIRVLPADRLPPCAMNTDEMVQIS 295
L N+++G L+GK G ++ ++ S + A+++ A+R + D +
Sbjct: 286 LAHNSLIGRLIGKEGRNLKAIQEKVETKIAISNSMADMQQCNAERTIAIYGDNDRCAEAE 345
Query: 296 GKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPAR 355
R+ YE ++ Q P Y G NF+ + G
Sbjct: 346 VLLMEKLRSCYENDMMIAQQQ---------PHQYPGINFNQ-------LSMFG------- 382
Query: 356 NSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFS--MKILCSAGKIGGVI 413
L G P M YG M N G G+ A+ S + A +G +I
Sbjct: 383 --GLQGGYGHPGMREYG-----MNYQGQNFRGQGYNGDQRAQMSETCTLYIPAESVGAMI 435
Query: 414 GKGGFNVKQLQQETGASIHV---EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNK 470
G G +++ + + ASI + ED + RV + EG W + D +L+ +
Sbjct: 436 GSKGSHIRNISRIANASIKIVPPEDGDDEKQRRVTIMGSPEGQWKSQFCIFD---KLKQE 492
Query: 471 TSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+E +T+ + +P++ VG ++G+GG+ + E++R T +++ +
Sbjct: 493 GFFNAEDERLTSEMTIPAAIVGRVIGKGGNNVRELQRLTSSEVVI 537
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 6/68 (8%)
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSE 541
TR+LVPS VG I+G+GG I + ++T A I V + +PG++E + I G+ E
Sbjct: 196 TRMLVPSQYVGAIIGKGGDSIRAITQKTHARIDV------HRKDNPGATEKAITINGTPE 249
Query: 542 HLISAHGT 549
+A G
Sbjct: 250 ACGAAVGA 257
>gi|124021196|gb|ABM88866.1| IGF2 mRNA-binding protein 1 [Danio rerio]
Length = 598
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 184/443 (41%), Gaps = 97/443 (21%)
Query: 114 SSREQSFGNSQP-----ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTI 167
+SR+ S G+ P AD R+L P++ +G +IGK G ++++ ++TQ+KI V
Sbjct: 180 TSRQMSPGSGIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN 239
Query: 168 PGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
G+ E+ I I+S+P E AA +L++ ++
Sbjct: 240 AGAAEKPISIHSTP----------------------EGCSAACRMILEIMNQ-------- 269
Query: 228 GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMN 287
+ D + ++L NN VG L+GK G ++++ +T I + P L N
Sbjct: 270 --EAKDTKTADEVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQDL--TLYN 325
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPL 347
+ + + G E L Q K +AY
Sbjct: 326 PERTITVKGS--------IEACCLAEQEIMK-----KVREAY------------------ 354
Query: 348 GNSSWPARNSSLHGMPSTPWMGGYG-------DQPSRMGSGSINSCPPGQMGEVSAEFSM 400
++ A N H +P +G G P +G+ S+ P G MG S + ++
Sbjct: 355 -DNDIAAMNQQTHLIPGLN-LGAIGLFPPSSAMPPPALGN-SVPGPPYGPMG-ASEQETV 410
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQT 460
+ A +G +IGK G ++KQL + GASI + AP ++ + +R G P
Sbjct: 411 HVYIPAQAVGALIGKKGQHIKQLSRFAGASIKI--APAEAPDSKMRMVIVTG---PPEAQ 465
Query: 461 IDAILQLQNKTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
A ++ K E + E+ + T + V ++ G ++G+GG +NE++ T A+ V
Sbjct: 466 FKAQGRIYGKLKEENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAE--V 523
Query: 516 VGARVKLQDPHPGSSECIVDIRG 538
V R + D H + IV I G
Sbjct: 524 VVPREQTPDEH---DQVIVKIIG 543
>gi|328702411|ref|XP_003241892.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Acyrthosiphon pisum]
Length = 428
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D R+L PS+ G +IGK G + LR + A +TV D PG E + II S+ +
Sbjct: 22 PDDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPDC-PGPERILTIISSNDNAL 80
Query: 185 ---AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
+ +D + K+ D D +
Sbjct: 81 KVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETD---------------------VD 119
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
R+LV + GC++GK G ++ LR +TG+ I++ + C M+TD +VQI+GKPN
Sbjct: 120 VRMLVHQSQAGCIIGKGGLKVKELREKTGSRIKIYTS----CCPMSTDRVVQITGKPNTC 175
Query: 302 KRALYEVSTLLHQNPRK--DKP--PSSFPQAY 329
+ EV LL P K + P P++F + Y
Sbjct: 176 SDCVREVLDLLKTAPVKGAEDPYDPNNFDEYY 207
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 19/134 (14%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+ +++L + G +IGKGGFN+ +L+ + A++ V D P ER++ + N
Sbjct: 24 DIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPDCP--GPERIL--TIISSNDNA 79
Query: 457 RSQTIDAILQLQNKTSEFSE---------------KGTITTRLLVPSSKVGCILGQGGHV 501
+ + L++ S F + + R+LV S+ GCI+G+GG
Sbjct: 80 LKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCIIGKGGLK 139
Query: 502 INEMRRRTQADIRV 515
+ E+R +T + I++
Sbjct: 140 VKELREKTGSRIKI 153
Score = 42.4 bits (98), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ 188
++ P G +IGKAG ++ +R+++ A IT+ + GS+ER+I I + ++I Q
Sbjct: 350 QVTIPKDLAGAIIGKAGARIRRIRQDSGAGITIGEPTEGSDERIITINGTDSQIQMAQ 407
>gi|27503479|gb|AAH42440.1| Pcbp3 protein [Mus musculus]
Length = 249
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 101/217 (46%), Gaps = 44/217 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPP 338
+ ++ ++P K +P P+S P + G + P
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQVRADP 198
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 61 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 47.0 bits (110), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 128 GAQVQVAGDMLPNSTERAVTISGTPDAI 155
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 49
>gi|449277028|gb|EMC85335.1| Insulin-like growth factor 2 mRNA-binding protein 1, partial
[Columba livia]
Length = 519
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/402 (22%), Positives = 160/402 (39%), Gaps = 75/402 (18%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
QP D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I I+S
Sbjct: 133 AKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHS 192
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E AA +L++ + + D
Sbjct: 193 TP----------------------EGCSAACKMILEIMQK----------EAKDTKTADE 220
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 221 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGSIE 278
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S L + P N +
Sbjct: 279 NCCRAEQEIMKKVREAYENDVAAMS----------------------LQSHLIPGLNLAA 316
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINS-CPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
G+ S G+ +S PP Q ++ + A +G +IGK G
Sbjct: 317 VGLFPASSSAVPPPPSSVSGAAPYSSFMPPEQE-------TVHVFIPAQAVGAIIGKKGQ 369
Query: 419 NVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS--- 475
++KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 370 HIKQLSRFASASIKI--APPETPDSKVRMVVITG---PPEAQFKAQGRIYGKLKEENFFG 424
Query: 476 --EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 425 PKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 466
>gi|340726176|ref|XP_003401437.1| PREDICTED: poly(rC)-binding protein 3-like [Bombus terrestris]
Length = 466
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 147/331 (44%), Gaps = 49/331 (14%)
Query: 122 NSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYS 179
N P+ T+ R++ +++G +IGK G IVK REE+ AKI ++D GS ER++ +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTG 67
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
I K A + E C+ + HD +
Sbjct: 68 PTNSIFK--------AFTLICKKFEEWCS------QFHD----------IQGSGGVPRPP 103
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
IT RL+VP + G L+GK G I+ +R TGA+I+V +D LP +T+ V ISG
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA-SDMLP---NSTERAVTISGTSE 159
Query: 300 VAKRALYEVSTLLHQNPRKD-------KPPSSFP------QAYGGQNFHSPPAPMADMHP 346
+ +Y + ++ ++P K KP P QAY Q ++ PA +DM
Sbjct: 160 AITQCIYHICCVMLESPPKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPA-HSDMGK 218
Query: 347 LGNSSWPARNSSLHGMPSTPW-MGGYGDQPSRMGSGS-INSCPPGQMGEVSAEFSMKILC 404
LG++ + G +TP GG +GS + + + + ++
Sbjct: 219 LGSNPLAGLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAGNNQTHEMTV 278
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
IG +IGKGG + +++Q +GA I + +
Sbjct: 279 PNELIGCIIGKGGTKIAEIRQISGAMIRISN 309
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 26/161 (16%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G VK+ ++E+GA I++ D ER++ +
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG----- 67
Query: 455 NPRSQTIDAILQLQNKTSEFSE------------KGTITTRLLVPSSKVGCILGQGGHVI 502
P + A + K E+ + IT RL+VP+S+ G ++G+GG I
Sbjct: 68 -PTNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 503 NEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
E+R T A I+V D P S+E V I G+SE +
Sbjct: 127 KEIREVTGASIQVA------SDMLPNSTERAVTISGTSEAI 161
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + VPN ++GC++GK G I +R +GA IR+ + A TD + I+G P+
Sbjct: 273 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 330
Query: 301 AKRALYEVS 309
A Y +S
Sbjct: 331 VALAQYLIS 339
>gi|417410101|gb|JAA51528.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 365
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 104/439 (23%), Positives = 175/439 (39%), Gaps = 111/439 (25%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 26 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 74
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 75 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 114
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 115 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 170
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST-- 365
+ ++ + + Q+ G+ P PM P+ + R S G P
Sbjct: 171 ICLVMLE---------TLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 221
Query: 366 ----PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVK 421
P + Y Q G +I+ ++ +V+ + S + G GF
Sbjct: 222 DLEGPPLDAYSIQ----GQHTISPLDLAKLNQVARQQSHFAMMHGGT--------GF--- 266
Query: 422 QLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
A DS ++ G W ++DA Q T
Sbjct: 267 --------------AGIDSSSPEVK-----GYW----ASLDASTQ-------------TT 290
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSE 541
L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 291 HELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSAA 343
Query: 542 HLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 344 SISLAQYLINARLSSEKGM 362
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 83/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 19 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 76
Query: 453 LWNPRSQTIDAILQLQNKT---SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 77 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 136
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 137 GAQVQVAG------DMLPNSTERAITIAG 159
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 20 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 58
>gi|41055221|ref|NP_957486.1| poly(rC)-binding protein 2 [Danio rerio]
gi|28279638|gb|AAH45508.1| Poly(rC) binding protein 2 [Danio rerio]
gi|37681899|gb|AAQ97827.1| poly(rC) binding protein 2 [Danio rerio]
gi|42744604|gb|AAH66603.1| Pcbp2 protein [Danio rerio]
Length = 318
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 83/333 (24%), Positives = 139/333 (41%), Gaps = 81/333 (24%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
A+ K II EED+ M++ +T R++V
Sbjct: 66 ---------------------TAIFKAFSMIIEKLEEDISSSMSNSTATSKPPVTLRIVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGTPLSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLGNSSWP 353
++ ++ ++P K +P PS P QAY Q H+ P P + +H L P
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 354 ARNSSLHGMPSTPWMGGYG---DQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIG 410
P P G+ D ++ GS + P + IG
Sbjct: 221 --------FPLAPSSQGFTAGMDASAQTGSHELTI--PNDL-----------------IG 253
Query: 411 GVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+IG+ G + +++Q +GA I + + S +R
Sbjct: 254 CIIGRQGAKINEIRQMSGAQIKIANPVEGSSDR 286
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S I+ + + + N T+ + K +T R++VP+S+ G ++G+GG I E+
Sbjct: 66 TAIFKAFSMIIEKLEEDISSSMSNSTA--TSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G+ +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGTPLSII 156
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 13/71 (18%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GSS+ V I GS
Sbjct: 244 ELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSSDRQVTITGSPAS 296
Query: 540 ---SEHLISAH 547
+E+LI+A
Sbjct: 297 ISLAEYLINAR 307
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|328702409|ref|XP_001943097.2| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 1
[Acyrthosiphon pisum]
gi|328702413|ref|XP_003241893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 3
[Acyrthosiphon pisum]
Length = 426
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 94/212 (44%), Gaps = 33/212 (15%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D R+L PS+ G +IGK G + LR + A +TV D PG E + II S+ +
Sbjct: 20 PDDIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPDC-PGPERILTIISSNDNAL 78
Query: 185 ---AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
+ +D + K+ D D +
Sbjct: 79 KVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETD---------------------VD 117
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
R+LV + GC++GK G ++ LR +TG+ I++ + C M+TD +VQI+GKPN
Sbjct: 118 VRMLVHQSQAGCIIGKGGLKVKELREKTGSRIKIYTS----CCPMSTDRVVQITGKPNTC 173
Query: 302 KRALYEVSTLLHQNPRK--DKP--PSSFPQAY 329
+ EV LL P K + P P++F + Y
Sbjct: 174 SDCVREVLDLLKTAPVKGAEDPYDPNNFDEYY 205
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 65/134 (48%), Gaps = 19/134 (14%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+ +++L + G +IGKGGFN+ +L+ + A++ V D P ER++ + N
Sbjct: 22 DIELRVLIPSKVAGSIIGKGGFNISRLRTDYNATVTVPDCP--GPERIL--TIISSNDNA 77
Query: 457 RSQTIDAILQLQNKTSEFSE---------------KGTITTRLLVPSSKVGCILGQGGHV 501
+ + L++ S F + + R+LV S+ GCI+G+GG
Sbjct: 78 LKVLGEVMGNLEDGGSRFKRGGAGGGQGNNDNQGGETDVDVRMLVHQSQAGCIIGKGGLK 137
Query: 502 INEMRRRTQADIRV 515
+ E+R +T + I++
Sbjct: 138 VKELREKTGSRIKI 151
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 35/58 (60%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ 188
++ P G +IGKAG ++ +R+++ A IT+ + GS+ER+I I + ++I Q
Sbjct: 348 QVTIPKDLAGAIIGKAGARIRRIRQDSGAGITIGEPTEGSDERIITINGTDSQIQMAQ 405
>gi|90652817|ref|NP_001035073.1| uncharacterized protein LOC664755 [Danio rerio]
gi|68533566|gb|AAH98540.1| Zgc:110045 [Danio rerio]
Length = 222
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 96/211 (45%), Gaps = 34/211 (16%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I ++D S ER++ I + I K
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISDG--SSPERIVTITGASEVIFK--- 73
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
A + ++ EED+ M + +T RL+ P +
Sbjct: 74 ----------------------AFAMIAEK-FEEDILASMINSTVTSRPPVTLRLVFPAS 110
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 111 QCGSLIGKGGSKIKEIRESTGAQVQV-AGDLLPD---STERAVTISGTPHAITQCVKHIC 166
Query: 310 TLLHQNPRKDK--PPSSFPQAYGGQNFHSPP 338
T++ ++P K P P A GG + P
Sbjct: 167 TVMLESPPKGATIPYRPKPSAGGGHTVLTQP 197
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 83/154 (53%), Gaps = 16/154 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AF 450
G ++ ++++L ++G +IGK G VK++++E+GA I++ D S ER++ + A
Sbjct: 11 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISDG--SSPERIVTITGAS 68
Query: 451 EGLWNPRSQTI-----DAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
E ++ + D + + N T + + +T RL+ P+S+ G ++G+GG I E+
Sbjct: 69 EVIFKAFAMIAEKFEEDILASMINST--VTSRPPVTLRLVFPASQCGSLIGKGGSKIKEI 126
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
R T A ++V G D P S+E V I G+
Sbjct: 127 RESTGAQVQVAG------DLLPDSTERAVTISGT 154
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 44/79 (55%), Gaps = 7/79 (8%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + +D P + +V I+G
Sbjct: 14 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI--SDGSSP-----ERIVTITG 66
Query: 297 KPNVAKRALYEVSTLLHQN 315
V +A ++ ++
Sbjct: 67 ASEVIFKAFAMIAEKFEED 85
>gi|294655167|ref|XP_457273.2| DEHA2B07238p [Debaryomyces hansenii CBS767]
gi|199429743|emb|CAG85274.2| DEHA2B07238p [Debaryomyces hansenii CBS767]
Length = 486
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 159/401 (39%), Gaps = 102/401 (25%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P ++R+ CP ++ V+GK G + +R++ +I V++ + ER++ + +
Sbjct: 107 PTYVMFRMYCPVKEASTVVGKKGEKINHIRDKANVRINVSENLKNVPERIVSVRGPAENV 166
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE--DLFGGMASDDDNENSTITA 242
A+ A + I+EE D M S N
Sbjct: 167 AR-------------------------AFGLITRTILEEPEDEPASMLSRQYN------L 195
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
+LL+P+ MVG ++GK+G + + + A ++ P +TD ++ I+G +
Sbjct: 196 KLLIPHPMVGYIIGKQGVKFREIEENSAAKLKAAEQ----PLPYSTDRILSITGVGDAIH 251
Query: 303 RALYEVSTLLHQNP---RKDK----------------------------PPSSFPQAYGG 331
A+Y +S ++ ++ +K+K P +S A GG
Sbjct: 252 IAIYYISQVVIEHKDCLKKNKVVFYNPANYHHTNVNNNMNNNMVNMSMMPSNSNMMAMGG 311
Query: 332 QNFHSPPAPMADMHPLGNSSWPAR-------NSSLHGMPST------------------P 366
N P M M + +++ P N + PS P
Sbjct: 312 AN----PLAMQGMASMKDNANPYTQQPKQPYNFQMMFQPSIHPQHQYVATPAPTSSMTLP 367
Query: 367 WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQE 426
Y D+ G + + PP Q+G + +F+ + + IG VIGKGG N+KQ+++
Sbjct: 368 PQNQYTDEHGNNMIGDVITSPPVQVGSTTDKFNEDVFVANANIGSVIGKGGNNIKQIREN 427
Query: 427 TGASIHVEDAPTDSDER-VIRASAFEGLWNPRSQTIDAILQ 466
+G + +V+ P D+R + +GL N R T+ LQ
Sbjct: 428 SGCT-YVKIEP---DQRQSLMLGGGKGLTNIRKLTLTGSLQ 464
>gi|115496720|ref|NP_001070027.1| insulin-like growth factor 2 mRNA-binding protein 1 [Danio rerio]
gi|123908308|sp|Q08CK7.1|IF2B1_DANRE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=IGF-II mRNA-binding protein 1; AltName: Full=VICKZ
family member 1
gi|115313169|gb|AAI24197.1| Insulin-like growth factor 2 mRNA binding protein 1 [Danio rerio]
gi|182891894|gb|AAI65463.1| Igf2bp1 protein [Danio rerio]
Length = 598
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 184/443 (41%), Gaps = 97/443 (21%)
Query: 114 SSREQSFGNSQP-----ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTI 167
+SR+ S G+ P AD R+L P++ +G +IGK G ++++ ++TQ+KI V
Sbjct: 180 TSRQMSPGSGIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN 239
Query: 168 PGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
G+ E+ I I+S+P E AA +L++ ++
Sbjct: 240 AGAAEKPISIHSTP----------------------EGCSAACRMILEIMNQ-------- 269
Query: 228 GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMN 287
+ D + ++L NN VG L+GK G ++++ +T I + P L N
Sbjct: 270 --EAKDTKTADEVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQDL--TLYN 325
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPL 347
+ + + G E L Q K +AY
Sbjct: 326 PERTITVKGS--------IEACCLAEQEIMK-----KVREAY------------------ 354
Query: 348 GNSSWPARNSSLHGMPSTPWMGGYG-------DQPSRMGSGSINSCPPGQMGEVSAEFSM 400
++ A N H +P +G G P +G+ S+ P G MG S + ++
Sbjct: 355 -DNDIAAMNQQTHLIPGLN-LGAIGLFPPSSAMPPPALGN-SVPGPPYGPMG-ASEQETV 410
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQT 460
+ A +G +IGK G ++KQL + GASI + AP ++ + +R G P
Sbjct: 411 HVYIPAQAVGALIGKKGQHIKQLSRFAGASIKI--APAEAPDSKMRMVIVTG---PPEAQ 465
Query: 461 IDAILQLQNKTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
A ++ K E + E+ + T + V ++ G ++G+GG +NE++ T A+ V
Sbjct: 466 FKAQGRIYGKLKEENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAE--V 523
Query: 516 VGARVKLQDPHPGSSECIVDIRG 538
V R + D H + IV I G
Sbjct: 524 VVPREQTPDEH---DQVIVKIIG 543
>gi|334350022|ref|XP_003342305.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
Length = 320
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 145/334 (43%), Gaps = 72/334 (21%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLG--NSSW 352
+ ++ ++P K +P PSS P QAY Q ++ P P + +H L S +
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHF 221
Query: 353 PAR--NSSLHGMP-STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
P N+ G+ S+P + GY + + S ++ I
Sbjct: 222 PMTHGNTGFSGIESSSPEVKGYW----------------AGLDASAQTTSHELTIPNDLI 265
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
G +IG+ G + +++Q +GA I + + S +R
Sbjct: 266 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 299
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 253 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 305
Query: 539 SSEHL 543
S+ +
Sbjct: 306 SAASI 310
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|363747265|ref|XP_003643961.1| PREDICTED: poly(rC)-binding protein 2-like isoform 3 [Gallus
gallus]
Length = 320
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 145/334 (43%), Gaps = 72/334 (21%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLG--NSSW 352
+ ++ ++P K +P PSS P QAY Q ++ P P + +H L S +
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHF 221
Query: 353 PAR--NSSLHGMP-STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
P N+ G+ S+P + GY + + S ++ I
Sbjct: 222 PMSHGNTGFSGIESSSPEVKGYW----------------AGLDASAQTTSHELTIPNDLI 265
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
G +IG+ G + +++Q +GA I + + S +R
Sbjct: 266 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 299
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 253 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 305
Query: 539 SSEHL 543
S+ +
Sbjct: 306 SAASI 310
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|290878251|emb|CBK39310.1| Pbp2p [Saccharomyces cerevisiae EC1118]
Length = 413
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 84/351 (23%), Positives = 151/351 (43%), Gaps = 70/351 (19%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P+D R+LC + ++G G + ++ ET A+I +++ I G ER++ + + +
Sbjct: 64 PSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDDV 123
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
AK + ALL+ H ++D+ E+ I+ L
Sbjct: 124 AKA------------------YGMIVRALLEEH------------GNEDNGEDIEISINL 153
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L+P++++GC++GKRG ++ + + A + P L ++ D ++ I+G P+ A
Sbjct: 154 LIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL----LSNDRILTINGVPDAIHIA 209
Query: 305 LYEVS-TLLH---QNPRKDKPPSSFPQAYGGQNF---HSPPAPM-----ADMHPLGN--S 350
+ +S TLL+ ++P+K+ S + Q + HS P + HP S
Sbjct: 210 TFYISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHSQPNTIFHQRNHQYHPSDKLLS 269
Query: 351 SWPARN----SSLHGMPSTPWM-----GGYGDQPS------RMGSGSINSCPPGQ---MG 392
P +N S+L M + + QP+ + G + S PG M
Sbjct: 270 YKPNKNLPISSTLLSMATPQYTTASVANATAFQPNFVIPNVTVLDGPVISPAPGNHLLMN 329
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
V E I +G VIGK G ++ +++ TG SI ++D S ER
Sbjct: 330 FVQQE----IFIDEKFVGNVIGKDGKHINSVKESTGCSIIIQDPVEGSSER 376
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF-EG 452
V ++ +++LC ++G G + +++ ET A I++ + ER++ +
Sbjct: 63 VPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDD 122
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ + A+L+ ++ + E I+ LL+P +GCI+G+ G + E+ + A
Sbjct: 123 VAKAYGMIVRALLE-EHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAK 181
Query: 513 I 513
+
Sbjct: 182 L 182
>gi|425769369|gb|EKV07864.1| hypothetical protein PDIP_71440 [Penicillium digitatum Pd1]
gi|425770994|gb|EKV09451.1| hypothetical protein PDIG_62050 [Penicillium digitatum PHI26]
Length = 364
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 140/320 (43%), Gaps = 44/320 (13%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A+ R + S++ G +IGKAG V LR+ET K V+ +PG +RV+ + +A
Sbjct: 43 AELTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGQLRSLA 102
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
+ + LL+ ++ GG+ S+ N T RLL
Sbjct: 103 RA------------------YAIVAKGLLEGAPQM----GMGGIVSN----NGTHPIRLL 136
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+ +N +G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A+
Sbjct: 137 ISHNQMGTIIGRQGLKIKHIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAI 192
Query: 306 YEVSTLLHQNPRKDKP-----PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
+E+ L + ++ P+ G Q +S P P GN NS +
Sbjct: 193 WEIGKCLLDDWQRGTGTVLYNPAVRASLSGSQPLNSNP-------PAGNGYQNNANSRQY 245
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF-SMKILCSAGKIGGVIGKGGFN 419
G R S + N P Q+ E E + I A +G +IG+GG
Sbjct: 246 NRTGNGADFSDGSYNRRSNSDAGNRGYP-QVTEDGEEIQTQNISIPADMVGCIIGRGGTK 304
Query: 420 VKQLQQETGASIHVEDAPTD 439
+ ++++ +GA I + AP D
Sbjct: 305 ITEIRRSSGARISIAKAPHD 324
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLW 454
AE +++ + S+ + G +IGK G NV L+ ETG V +RV+ + L
Sbjct: 43 AELTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGQLRSLA 102
Query: 455 NPRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+ +L+ S GT RLL+ +++G I+G+ G I + + +
Sbjct: 103 RAYAIVAKGLLEGAPQMGMGGIVSNNGTHPIRLLISHNQMGTIIGRQGLKIKHI--QDAS 160
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
+R+V + L P S+E IV+++G+ E + A
Sbjct: 161 GVRMVAQKEML----PQSTERIVEVQGTPEGIEKA 191
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P +MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 284 TQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAKA----PHDETGERMFTIMGSAQA 339
Query: 301 AKRALYEVSTLLHQNPRKDKP-PSSFPQ 327
++ALY LL++N +K S PQ
Sbjct: 340 NEKALY----LLYENLEAEKTRRSQLPQ 363
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +P+ VGCI+G+GG I E+RR + A I + A PH + E + I GS+
Sbjct: 284 TQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAKA------PHDETGERMFTIMGSA 337
Query: 541 E 541
+
Sbjct: 338 Q 338
>gi|311252459|ref|XP_003125105.1| PREDICTED: poly(rC)-binding protein 1-like [Sus scrofa]
Length = 356
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 104/435 (23%), Positives = 175/435 (40%), Gaps = 103/435 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 161
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP--ST 365
+ ++ + + Q+ G+ P PM P+ + R S G P +
Sbjct: 162 ICLVMLE---------TLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 212
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
G D S G +I+ ++ +V+ + S + G GF
Sbjct: 213 DLEGTPLDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGT--------GF------- 257
Query: 426 ETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLL 485
A DS ++ G W ++DA Q T L
Sbjct: 258 ----------AGIDSSSPEVK-----GYW----ASLDASTQ-------------TTHELT 285
Query: 486 VPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLIS 545
+P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+ +
Sbjct: 286 IPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSAASISL 338
Query: 546 AHGTYQSFMTSGQSM 560
A + ++S + M
Sbjct: 339 AQYLINARLSSEKGM 353
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTERAITIAG 150
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
>gi|350591798|ref|XP_003483335.1| PREDICTED: replication factor C (activator 1) 4, 37kDa [Sus scrofa]
Length = 578
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 172/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 153 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 212
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 213 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 241
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 242 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 298
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 299 NPERTITVKGTVEACANAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 349
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + G P Y P SG +S PP Q G S
Sbjct: 350 LGIFSTGLSVLPPPAGPRGAPPAPPY--HPFATHSGYFSSLYPPHQFGPFPHHHSYPEQE 407
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 408 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 467
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 468 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 522
Query: 514 RV 515
V
Sbjct: 523 IV 524
>gi|66472276|ref|NP_001018567.1| poly(rC) binding protein 3 [Danio rerio]
gi|63101380|gb|AAH95089.1| Poly(rC) binding protein 3 [Danio rerio]
gi|182890686|gb|AAI65090.1| Pcbp3 protein [Danio rerio]
Length = 241
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 107/233 (45%), Gaps = 45/233 (19%)
Query: 115 SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
S+ QS G T+ R+L +++G +IGK G VK +REE+ A+I +++ ER+
Sbjct: 4 SKVQSEGGLNVTLTI-RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERI 60
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMAS 231
+ I + PT DA+ K I EED+ M++
Sbjct: 61 VTI-TGPT----------------------------DAIFKAFAMIAYKFEEDIINSMSN 91
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
+T RL+VP + G L+GK G I+ +R TGA ++V D LP +T+
Sbjct: 92 SPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQV-AGDMLP---NSTERA 147
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPP 338
V ISG P + + ++ ++ ++P K +P P+S P + G + P
Sbjct: 148 VTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQVRADP 200
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 10 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 62
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 63 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 121
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I EMR T A ++V G D P S+E V I G+ E +I
Sbjct: 122 IKEMRESTGAQVQVAG------DMLPNSTERAVTISGTPEAII 158
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 71 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEMREST 129
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 130 GAQVQVAGDMLPNSTERAVTISGTPEAI 157
>gi|147903491|ref|NP_001091320.1| poly(rC) binding protein 1 [Xenopus laevis]
gi|124481736|gb|AAI33216.1| LOC100037147 protein [Xenopus laevis]
Length = 221
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 104/225 (46%), Gaps = 44/225 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 66 --------------------DAIFKAFAMIAYKFEEDIINSMSNSTATSKPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TG+ ++V D LP +T+ V ISG P+ + + +
Sbjct: 106 ASQCGSLIGKGGSKIKEIRESTGSQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHP 346
+ ++ ++P K +P P+S P + G +S A HP
Sbjct: 162 ICVVMLESPPKGATIPYRPKPASAPVIFAGGQAYSIQGQYAIPHP 206
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 87/161 (54%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++ +
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTITGPT 65
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + D I + N T+ + K +T RL+VP+S+ G ++G+GG I
Sbjct: 66 DAIFKAFAMIAYKFEE--DIINSMSNSTA--TSKPPVTLRLVVPASQCGSLIGKGGSKIK 121
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T + ++V G D P S+E V I G+ + +I
Sbjct: 122 EIRESTGSQVQVAG------DMLPNSTERAVTISGTPDAII 156
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 69 FKAFAMIAYKFEEDIINSMSNSTATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 127
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
+++ VA D +P S ER + I +P I
Sbjct: 128 GSQVQVAGDMLPNSTERAVTISGTPDAI 155
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 49
>gi|328711755|ref|XP_001946091.2| PREDICTED: hypothetical protein LOC100167988 [Acyrthosiphon pisum]
Length = 1425
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 93/425 (21%), Positives = 169/425 (39%), Gaps = 88/425 (20%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT-IPGSEERVIIIYSSPTKIAKTQNK 190
IL S +G +IG+ G+ +K + E+T A+I V + I GS + I IY +P
Sbjct: 212 ILVHSDIVGVIIGRGGSTIKEIIEQTSARIIVNKSDIVGSLGKPIAIYGTPENCTN---- 267
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
A + L VH ++ + S + R+L+ +N+
Sbjct: 268 -----------------ACRKILEVVHQKVTYTN------------KSNVILRILIQDNL 298
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G+ G+ I+ + SET I V + + +N + + G +A ++ST
Sbjct: 299 IGLIIGEEGNTIRNIVSETETKINVFKINNITIDDINYKSVCAVEGSIENISKAESQIST 358
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGG 370
L Q+ K P + + RN S
Sbjct: 359 KLRQSFEKYLPDVAIHVELVSE---------------------MRNFS------------ 385
Query: 371 YGDQPSRMGSGSINSCPPGQMGEV---SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQET 427
MG + ++C PG + + E + IL + + +IG G +K + Q+T
Sbjct: 386 ----KMEMGLPNFSNCVPGAIPVIRNKQTESMLCILVHSDMVHAIIGNCGSKIKAITQQT 441
Query: 428 GASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT----ITTR 483
+HV+ P D+ + +A +G NP T +A L++ F E T + +
Sbjct: 442 STWVHVQ--PKDNFVNIEQAIIIKG--NPEKCT-NACLKM---LEVFQETNTCSSDVILK 493
Query: 484 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+L+P + +G I+ + G+ I ++ T+ I V D + C+V+ G E++
Sbjct: 494 ILIPDNLIGIIIEEEGYTIKKIMSETETKISVSSITGITIDSFNYNRICMVE--GLIENI 551
Query: 544 ISAHG 548
A G
Sbjct: 552 SKAEG 556
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/280 (20%), Positives = 124/280 (44%), Gaps = 43/280 (15%)
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
S + ++L+P+N++G ++ + G I+++ SET I V + + N + + + G
Sbjct: 488 SDVILKILIPDNLIGIIIEEEGYTIKKIMSETETKISVSSITGITIDSFNYNRICMVEGL 547
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
+A ++S L Q+ F Q+ + P M ++ +G +
Sbjct: 548 IENISKAEGQISAKLRQSIE------HFLQSVDVK--VEPALEMRNLCEIGLT------- 592
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
+ S +G +I P + + EF+++IL + I +IGK G
Sbjct: 593 ----------------RVSHVGPKTI---PAIE----NREFTLRILVQSNMISVIIGKRG 629
Query: 418 FNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS 475
+K++ Q+T A IHV+ D+ + +++ + E N + +D +Q K + +
Sbjct: 630 STIKEITQQTSARIHVDQKDSVSSTEKAITIRGIPENCTNACRKILDV---MQKKNAATT 686
Query: 476 EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ ++LV +++G I+GQ + + ++ T +I V
Sbjct: 687 YNSDVILKILVHDNRIGAIIGQERNTVRKIMSETDTNIIV 726
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 84/421 (19%), Positives = 159/421 (37%), Gaps = 97/421 (23%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T+ IL S + +IG+ + +K + E+T +I V + I G+ E+ I IY +P
Sbjct: 29 TILSILVLSDMVDIIIGRCDSTIKEIMEQTSVRINVNE-IFGNLEKAITIYGTP------ 81
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
+C A K+ + + ++ ++ S + ++L+
Sbjct: 82 -----------------ENCTI--ACRKILEVVQQKAIYTN--------KSDVILKILIH 114
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
N +G +G+ ++I+ + SET I V + +N + + G +A +
Sbjct: 115 ENRIGLAIGEEDNIIRNIMSETETKINVYSNVDITINNINYKSICTVEGSIENVSKAESQ 174
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPA-RNSSLHGMPSTP 366
+S A GQ+ PMA+ P S+ P RN M
Sbjct: 175 IS------------------AKIGQSLEKYLQPMANCVP---SAIPVIRNKQTESM---- 209
Query: 367 WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQE 426
+ IL + +G +IG+GG +K++ ++
Sbjct: 210 ---------------------------------LCILVHSDIVGVIIGRGGSTIKEIIEQ 236
Query: 427 TGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLV 486
T A I V +D + + A G + IL++ ++ ++ K + R+L+
Sbjct: 237 TSARIIVN--KSDIVGSLGKPIAIYGTPENCTNACRKILEVVHQKVTYTNKSNVILRILI 294
Query: 487 PSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
+ +G I+G+ G+ I + T+ I V D S C V+ GS E++ A
Sbjct: 295 QDNLIGLIIGEEGNTIRNIVSETETKINVFKINNITIDDINYKSVCAVE--GSIENISKA 352
Query: 547 H 547
Sbjct: 353 E 353
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 96/208 (46%), Gaps = 26/208 (12%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG------SEERVI 175
N+ +D + +IL P IG +I + G +K + ET+ KI+V+ +I G + R+
Sbjct: 484 NTCSSDVILKILIPDNLIGIIIEEEGYTIKKIMSETETKISVS-SITGITIDSFNYNRIC 542
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL---------F 226
++ I+K + + + ++S+E + D +KV + +L
Sbjct: 543 MVEGLIENISKAEGQ----ISAKLRQSIEHFLQSVD--VKVEPALEMRNLCEIGLTRVSH 596
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
G + EN T R+LV +NM+ ++GKRG I+ + +T A I V D +
Sbjct: 597 VGPKTIPAIENREFTLRILVQSNMISVIIGKRGSTIKEITQQTSARIHVDQKDSVS---- 652
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+T++ + I G P A ++ ++ +
Sbjct: 653 STEKAITIRGIPENCTNACRKILDVMQK 680
Score = 38.9 bits (89), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 37/197 (18%), Positives = 86/197 (43%), Gaps = 25/197 (12%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-----EERVIII 177
+ +D + +IL +IG IG+ NI++++ ET+ KI V + + + + +
Sbjct: 102 TNKSDVILKILIHENRIGLAIGEEDNIIRNIMSETETKINVYSNVDITINNINYKSICTV 161
Query: 178 YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN 237
S ++K +++ ++ ++ ++P + + V N+
Sbjct: 162 EGSIENVSKAESQISAKIGQSLEKYLQPMANCVPSAIPVI----------------RNKQ 205
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
+ +LV +++VG ++G+ G I+ + +T A I V +D + + + I G
Sbjct: 206 TESMLCILVHSDIVGVIIGRGGSTIKEIIEQTSARIIVNKSDIVGSLG----KPIAIYGT 261
Query: 298 PNVAKRALYEVSTLLHQ 314
P A ++ ++HQ
Sbjct: 262 PENCTNACRKILEVVHQ 278
>gi|345796405|ref|XP_535832.3| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 2 [Canis lupus familiaris]
Length = 531
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 172/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 106 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 165
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 166 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 194
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 195 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 251
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 252 NPERTITVKGTVEACANAEVEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 302
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + G P Y P SG +S PP Q G S
Sbjct: 303 LGIFSTGLSVLPPPAGPRGAPPAPPY--HPFATHSGYFSSLYPPHQFGPFPHHHSYPEQE 360
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 361 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 420
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 421 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 475
Query: 514 RV 515
V
Sbjct: 476 IV 477
>gi|225429462|ref|XP_002278761.1| PREDICTED: uncharacterized protein LOC100259454 [Vitis vinifera]
Length = 690
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 112/262 (42%), Gaps = 41/262 (15%)
Query: 70 LSHSRCIRFCCIMDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGN----SQP 125
L+ R + ++ N KRP + G G G+ SS G S P
Sbjct: 66 LAKQRAQEIAARLFSNASNTEAKRPRVE-NGAGAGGFDSGDKGFSSAPSDVGQKPMISTP 124
Query: 126 A---------DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEER 173
+ T +I P+ ++G +IGK G +K L+ ++ AKI V D P S R
Sbjct: 125 SAIPVSYGYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTR 184
Query: 174 VIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD 233
++ + +P +IAK + +D +E + I+ L G S+
Sbjct: 185 LVELMGTPDQIAKAEQLINDVLSEAEAGG---------------SGIVSRRLTGQAGSEQ 229
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
+ VPNN VG ++GK G+ I+ +++ TGA I+V+P LPP + + VQ
Sbjct: 230 --------FVMKVPNNKVGLIIGKGGETIKNMQARTGARIQVIPL-HLPPGDTSMERTVQ 280
Query: 294 ISGKPNVAKRALYEVSTLLHQN 315
I G + A V+ ++ +N
Sbjct: 281 IDGTSEQIESAKQLVNEVISEN 302
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIRASAFEGLWN 455
S KI G++G +IGKGG +K LQ ++GA I V DA +S R++
Sbjct: 137 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQIA 196
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITTRLL-----------VPSSKVGCILGQGGHVINE 504
Q I+ +L +E G ++ RL VP++KVG I+G+GG I
Sbjct: 197 KAEQLINDVL----SEAEAGGSGIVSRRLTGQAGSEQFVMKVPNNKVGLIIGKGGETIKN 252
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
M+ RT A I+V+ + D S E V I G+SE + SA
Sbjct: 253 MQARTGARIQVIPLHLPPGD---TSMERTVQIDGTSEQIESA 291
>gi|189234912|ref|XP_969611.2| PREDICTED: similar to AGAP004942-PA [Tribolium castaneum]
Length = 446
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 91/337 (27%), Positives = 146/337 (43%), Gaps = 54/337 (16%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQN 189
R++ +++G +IGK G IVK REE+ AKI ++D GS ER++ + S I K
Sbjct: 20 RLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTGSTNAIFK--- 73
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIE-EDLFGGMASDDDNENSTITARLLVPN 248
A + + E +D+ G IT RL+VP
Sbjct: 74 ----------------------AFTLICKKFEEFQDINSG---GSGVPRPPITLRLIVPA 108
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA+I+V ++ LP +T+ V ISG + +Y +
Sbjct: 109 SQCGSLIGKGGSKIKEIREVTGASIQV-ASEMLP---NSTERAVTISGTGEAITQCIYHI 164
Query: 309 STLLHQNPRKD-------KPPSSFP------QAYGGQNFHSPPAPMADMHPLGNSSWPAR 355
T++ ++P K KP P QAY Q ++ PA DM LG S
Sbjct: 165 CTVMLESPPKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPA-HTDMSALGKSPLAGL 223
Query: 356 NSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGK 415
+ G + GG +GS + + S + + ++ IG +IGK
Sbjct: 224 AALGLGGLAPTNTGGLNPAALAALAGSQLRTSNSRNQQNSNQQTHEMTVPNELIGCIIGK 283
Query: 416 GGFNVKQLQQETGASIHV---EDAPTDSDERVIRASA 449
GG + +++Q +GA I + +D + +R I S
Sbjct: 284 GGTKIAEIRQISGAMIRISNCDDRESGVTDRTITISG 320
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 78/152 (51%), Gaps = 17/152 (11%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPR 457
+++++ ++G +IGK G VK+ ++E+GA I++ D ER++ + G N
Sbjct: 17 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVT---GSTNAI 71
Query: 458 SQTIDAILQLQNKTSEFSEKGT------ITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+ I + + + + G+ IT RL+VP+S+ G ++G+GG I E+R T A
Sbjct: 72 FKAFTLICKKFEEFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGA 131
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
I+V + P S+E V I G+ E +
Sbjct: 132 SIQVASEML------PNSTERAVTISGTGEAI 157
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 11/80 (13%)
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
+D+ N T+T RL++ VG ++GK+G++++R R E+GA I + +D P + +V
Sbjct: 10 NDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI--SDGSCP-----ERIV 62
Query: 293 QISGKPNVAKRALYEVSTLL 312
++G N A+++ TL+
Sbjct: 63 TVTGSTN----AIFKAFTLI 78
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + VPN ++GC++GK G I +R +GA IR+ D TD + ISG P+
Sbjct: 267 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGV--TDRTITISGNPDA 324
Query: 301 AKRALYEVS 309
A Y ++
Sbjct: 325 VALAQYLIN 333
>gi|148833484|ref|NP_001092090.1| poly(rC)-binding protein 2 isoform c [Homo sapiens]
gi|157042772|ref|NP_001096636.1| poly(rC)-binding protein 2 isoform 3 [Mus musculus]
gi|73996241|ref|XP_857995.1| PREDICTED: poly(rC)-binding protein 2 isoform 20 [Canis lupus
familiaris]
gi|149714839|ref|XP_001504575.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Equus caballus]
gi|291389259|ref|XP_002711066.1| PREDICTED: poly(rC) binding protein 2-like isoform 3 [Oryctolagus
cuniculus]
gi|332206041|ref|XP_003252098.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Nomascus
leucogenys]
gi|348581075|ref|XP_003476303.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cavia porcellus]
gi|410964551|ref|XP_003988817.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Felis catus]
gi|426224372|ref|XP_004006345.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Ovis aries]
gi|426372755|ref|XP_004053283.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Gorilla gorilla
gorilla]
gi|51491472|dbj|BAD36897.1| poly(rC) binding protein 2 [Homo sapiens]
gi|119617112|gb|EAW96706.1| poly(rC) binding protein 2, isoform CRA_a [Homo sapiens]
gi|148672027|gb|EDL03974.1| poly(rC) binding protein 2, isoform CRA_a [Mus musculus]
gi|149031921|gb|EDL86833.1| rCG50739, isoform CRA_b [Rattus norvegicus]
Length = 331
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 145/334 (43%), Gaps = 72/334 (21%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLG--NSSW 352
+ ++ ++P K +P PSS P QAY Q ++ P P + +H L S +
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHF 221
Query: 353 PAR--NSSLHGMP-STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
P N+ G+ S+P + GY + + S ++ I
Sbjct: 222 PMTHGNTGFSGIESSSPEVKGYW----------------AGLDASAQTTSHELTIPNDLI 265
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
G +IG+ G + +++Q +GA I + + S +R
Sbjct: 266 GCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 299
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 253 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 305
Query: 539 SSEHL 543
S+ +
Sbjct: 306 SAASI 310
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|327274617|ref|XP_003222073.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3-like
[Anolis carolinensis]
Length = 584
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 92/393 (23%), Positives = 161/393 (40%), Gaps = 73/393 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L P++ +G +IGK G ++++ ++TQ+KI + G+ E+ I I+S+P +
Sbjct: 200 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTPEGCS---- 255
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
SA + E M+ AQD + EE I ++L NN
Sbjct: 256 ----SACKIIMEIMQKE--AQDT------KFTEE----------------IPLKILAHNN 287
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VG L+GK G ++++ +T I + P L N + + + G +A E+
Sbjct: 288 FVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIETCAKAEEEIM 345
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG--NSSWPARNSSLHGMPSTPW 367
+ + S+ N + P +++ LG S G+ S
Sbjct: 346 KKIRE---------SYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPSVGVASAAS 396
Query: 368 MGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQET 427
Y PP G+ ++ + A +G +IGK G ++KQL +
Sbjct: 397 ASSY---------------PP--FGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFA 439
Query: 428 GASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EKGTITT 482
GASI + AP + E +R G P A ++ K E + E+ +
Sbjct: 440 GASIKI--APAEGPEAKLRMVIITG---PPEAQFKAQGRIYGKLKEENFFGPKEEVKLEA 494
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ VPS G ++G+GG +NE++ T A++ V
Sbjct: 495 HIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVV 527
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 39/193 (20%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIY 178
FG ++TV+ + P+ +G +IGK G +K L A I +A P ++ R++II
Sbjct: 403 FGQQPESETVH-LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPEAKLRMVIIT 461
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
P K Q +++ ++ EE+ FG E
Sbjct: 462 GPPEAQFKAQG-------------------------RIYGKLKEENFFG------PKEEV 490
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-- 296
+ A + VP+ G ++GK G + L++ T A + V+P D+ P N +V+I+G
Sbjct: 491 KLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 547
Query: 297 -KPNVAKRALYEV 308
+A+R + E+
Sbjct: 548 YACQLAQRKIQEI 560
>gi|255943089|ref|XP_002562313.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211587046|emb|CAP94706.1| Pc18g04820 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 366
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 78/323 (24%), Positives = 144/323 (44%), Gaps = 50/323 (15%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
AD R + S++ G +IGKAG V LR+ET K V+ +PG +RV+ + +A
Sbjct: 45 ADLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGQLRSLA 104
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
+ + LL+ ++ GG+ S+ N T RLL
Sbjct: 105 RA------------------YAIVAKGLLEGAPQM----GMGGIVSN----NGTHPVRLL 138
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+ +N +G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A+
Sbjct: 139 ISHNQMGTIIGRQGLKIKHIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAI 194
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPP--APMADMHPLGNSSWPARNSSLHGMP 363
+E+ L + ++ G ++P A ++ PL N+ PA N +
Sbjct: 195 WEIGKCLLDDWQRGT----------GTVLYNPAVRASLSGSQPLNNNP-PAGNGYQNNTS 243
Query: 364 STPW-MGGYGDQPSRMGSGSINSCPPGQMG-----EVSAEF-SMKILCSAGKIGGVIGKG 416
S + G G S G ++ G G E E + I A +G +IG+G
Sbjct: 244 SRQYNRTGNGADFSDGGYNRRSNSDAGNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRG 303
Query: 417 GFNVKQLQQETGASIHVEDAPTD 439
G + ++++ +GA I + AP D
Sbjct: 304 GTKITEIRRSSGARISIAKAPHD 326
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 10/155 (6%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLW 454
A+ +++ + S+ + G +IGK G NV L+ ETG V +RV+ + L
Sbjct: 45 ADLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGQLRSLA 104
Query: 455 NPRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+ +L+ S GT RLL+ +++G I+G+ G I + + +
Sbjct: 105 RAYAIVAKGLLEGAPQMGMGGIVSNNGTHPVRLLISHNQMGTIIGRQGLKIKHI--QDAS 162
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
+R+V + L P S+E IV+++G+ E + A
Sbjct: 163 GVRMVAQKEML----PQSTERIVEVQGTPEGIEKA 193
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P +MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 286 TQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAKA----PHDETGERMFTIMGSAQA 341
Query: 301 AKRALYEVSTLLHQNPRKDKP-PSSFPQ 327
++ALY LL++N +K S PQ
Sbjct: 342 NEKALY----LLYENLEAEKTRRSQLPQ 365
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +P+ VGCI+G+GG I E+RR + A I + A PH + E + I GS+
Sbjct: 286 TQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAKA------PHDETGERMFTIMGSA 339
Query: 541 E 541
+
Sbjct: 340 Q 340
>gi|209156062|gb|ACI34263.1| PolyrC-binding protein 2 [Salmo salar]
Length = 318
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 136/330 (41%), Gaps = 75/330 (22%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
A+ K II EED+ M + +T R++V
Sbjct: 66 ---------------------TAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGTPQSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLGNSSWP 353
++ ++ ++P K +P PS P QAY Q H+ P P + +H L P
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQSP 220
Query: 354 ARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVI 413
P P G+ G M + S ++ IG +I
Sbjct: 221 --------FPMGPNNPGF----------------QGGMDASAQTSSHEMTIPNDLIGCII 256
Query: 414 GKGGFNVKQLQQETGASIHVEDAPTDSDER 443
G+ G + +++Q +GA I + + S +R
Sbjct: 257 GRQGSKINEIRQMSGAQIKIANPVEGSADR 286
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S I+ + + + N T+ + K +T R++VP+S+ G ++G+GG I E+
Sbjct: 66 TAIFKAFSMIIEKLEEDISSSMTNSTA--TSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G+ + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGTPQSII 156
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 13/71 (18%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
+ +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS
Sbjct: 244 EMTIPNDLIGCIIGRQGSKINEIRQMS-------GAQIKIANPVEGSADRQVTITGSAAS 296
Query: 540 ---SEHLISAH 547
+E+LI+A
Sbjct: 297 ISLAEYLINAR 307
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|440899520|gb|ELR50813.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Bos grunniens
mutus]
Length = 597
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 172/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 172 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 231
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 232 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 260
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 261 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 317
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 318 NPERTITVKGTVEACANAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 368
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + G P Y P SG +S PP Q G S
Sbjct: 369 LGIFSTGLSVLPPPAGPRGAPPAPPY--HPFATHSGYFSSLYPPHQFGPFPHHHSYPEQE 426
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 427 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 486
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 487 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 541
Query: 514 RV 515
V
Sbjct: 542 IV 543
>gi|301759723|ref|XP_002915742.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Ailuropoda melanoleuca]
Length = 599
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 172/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 320 NPERTITVKGTVEACANAEVEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 370
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + G P Y P SG +S PP Q G S
Sbjct: 371 LGIFSTGLSVLPPPAGPRGAPPAPPY--HPFATHSGYFSSLYPPHQFGPFPHHHSYPEQE 428
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 429 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 488
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 489 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 543
Query: 514 RV 515
V
Sbjct: 544 IV 545
>gi|257831439|gb|ACV71020.1| UPA21 [Capsicum annuum]
Length = 433
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 75/327 (22%), Positives = 143/327 (43%), Gaps = 42/327 (12%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D VYR++ P K+G +IG+ G +VK + E+T A+I V + G+ +R+++I
Sbjct: 51 PGDNVYRLVVPLVKVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLI------- 103
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
S E + P A DA+ +V R+ L GG + + +L
Sbjct: 104 ---------SGREDPDAQVSP---AMDAVFRVFKRV--AGLEGGDPGAAAAGFAFCSFKL 149
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L+ ++ L+G+ G I+ ++ +GA++RVL D + P A + +V+I G+ A
Sbjct: 150 LMASSQAVHLIGRHGSTIKEIQERSGASLRVLSEDDVVPYATADERIVEIRGEGLKVLDA 209
Query: 305 LYEVST-------------LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSS 351
V + + +D+P S+ A Q+ +S ++D N
Sbjct: 210 FEAVVRQLRKFLVDHSMIPIFEKTCSQDRPLESW--AEKSQSLNSEAGAVSDYSFSMNRD 267
Query: 352 WPARN--SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+ +++ + YG P G G I + G++G V + + +
Sbjct: 268 TYLLDCEAAMDSKLPRSTLSLYGQDP---GHGGIRTS-AGRIGPVVTQMTKVMQVPLLYA 323
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDA 436
+IG GG N+ +++ + A + V+++
Sbjct: 324 EDIIGIGGTNIAYIRRTSKAVLTVQES 350
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 75/148 (50%), Gaps = 11/148 (7%)
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
K+G +IG+ G VK++ ++TGA I V + P + +R++ S E S +DA+ ++
Sbjct: 64 KVGSIIGRKGELVKKMCEQTGARIRVLEGPLGNADRIVLISGREDPDAQVSPAMDAVFRV 123
Query: 468 QNKTSEFS---------EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGA 518
+ + + +LL+ SS+ ++G+ G I E++ R+ A +RV+
Sbjct: 124 FKRVAGLEGGDPGAAAAGFAFCSFKLLMASSQAVHLIGRHGSTIKEIQERSGASLRVLSE 183
Query: 519 RVKLQDPHPGSSECIVDIRGSSEHLISA 546
+ P+ + E IV+IRG ++ A
Sbjct: 184 DDVV--PYATADERIVEIRGEGLKVLDA 209
>gi|395839827|ref|XP_003792777.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Otolemur garnettii]
Length = 554
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 95/412 (23%), Positives = 162/412 (39%), Gaps = 94/412 (22%)
Query: 113 NSSREQSFGNSQPA---DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIP 168
+SSREQ G S A D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS 233
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
G+ E+ + I+++P E C R+I E +
Sbjct: 234 GAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM--Q 261
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+D+ I ++L N +VG L+GK G ++++ ETG I + L N
Sbjct: 262 KEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNP 319
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG 348
+ + + G A E+ L + +F N HS + ++P
Sbjct: 320 ERTITVKGTVEACANAEIEIMKKLRE---------AFENDMLAVNTHS--GYFSSLYPH- 367
Query: 349 NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGK 408
H P Y +Q +N P Q
Sbjct: 368 -----------HQFSPFPHHHSYPEQEI------VNLFIPTQA----------------- 393
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAILQ 466
+G +IGK G ++KQL + GASI + + P S+ VI E + + + +
Sbjct: 394 VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKL-- 451
Query: 467 LQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 452 ---KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 500
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 377 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 436
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 437 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 465
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 466 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 522
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 523 SQTAQRKIREI 533
>gi|300795407|ref|NP_001179433.1| insulin-like growth factor 2 mRNA-binding protein 2 [Bos taurus]
gi|296491332|tpg|DAA33395.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 1
[Bos taurus]
Length = 599
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 172/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 320 NPERTITVKGTVEACANAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 370
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + G P Y P SG +S PP Q G S
Sbjct: 371 LGIFSTGLSVLPPPAGPRGAPPAPPY--HPFATHSGYFSSLYPPHQFGPFPHHHSYPEQE 428
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 429 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 488
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 489 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 543
Query: 514 RV 515
V
Sbjct: 544 IV 545
>gi|432865686|ref|XP_004070563.1| PREDICTED: poly(rC)-binding protein 4-like [Oryzias latipes]
Length = 467
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 86/346 (24%), Positives = 153/346 (44%), Gaps = 67/346 (19%)
Query: 117 EQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERV 174
EQ FG+ T+ R+L +++G +IGK G VK +REE+ A++ +++ GS ER+
Sbjct: 15 EQDFGDGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE---GSCPERI 71
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMAS 231
I I S D++ + I +EEDL +A+
Sbjct: 72 ITITGS-----------------------------TDSVFRAFTMITYKLEEDLTALVAN 102
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
+ +T RL++P + G L+GK G I+ +R TGA I+V D LP +T+
Sbjct: 103 GTISSKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQV-AGDLLP---NSTERG 158
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDKP----PSSFPQAY---GGQNFHS---PPAPM 341
V ISG + + + + T++ ++P K P+ P A G Q F + P P+
Sbjct: 159 VTISGNQDSVIQCVKLICTVILESPPKGATIPYRPTPSPAALLIAGNQVFEASDFAPHPL 218
Query: 342 ADMHPLG---NSSWPARN---------SSLHGMPSTPWMGGYGDQPSRMGSGS--INSCP 387
+ G ++ +N + LH + + S + G ++ P
Sbjct: 219 YSVTQGGLDLQQAYALQNQYGIPHSELAKLHQLSVQQGLSPIAQPASTIMPGKLLLHFLP 278
Query: 388 PGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
G + +++ S ++L IG +IG+ G + +++Q +GA I +
Sbjct: 279 SGM--DSTSQTSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKI 322
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 84/161 (52%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP--------TDSDER 443
G + ++++L ++G +IGK G VK++++E+ A +++ + T S +
Sbjct: 21 GGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEGSCPERIITITGSTDS 80
Query: 444 VIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
V RA F + + + A++ N T S K +T RL++P+S+ G ++G+GG I
Sbjct: 81 VFRA--FTMITYKLEEDLTALVA--NGT--ISSKPPVTLRLVIPASQCGSLIGKGGAKIK 134
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A I+V G D P S+E V I G+ + +I
Sbjct: 135 EIRESTGAQIQVAG------DLLPNSTERGVTISGNQDSVI 169
>gi|225707620|gb|ACO09656.1| PolyrC-binding protein 2 [Osmerus mordax]
Length = 318
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/331 (25%), Positives = 135/331 (40%), Gaps = 77/331 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
A+ K II EED+ M + +T R++V
Sbjct: 66 ---------------------TAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGTPQSIIECVK 160
Query: 307 EVS-TLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLGNSSW 352
++ +L Q+P K +P PS P QAY Q H+ P P + +H L
Sbjct: 161 QICVVMLEQSPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQLAMQQS 220
Query: 353 PARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGV 412
P P P G+ + + S P + IG +
Sbjct: 221 P--------FPIAPNNQGFTGMDASAQTSSHEMTIPNDL-----------------IGCI 255
Query: 413 IGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
IG+ G + +++Q +GA I + + S +R
Sbjct: 256 IGRQGSKINEIRQMSGAQIKIANPVDGSADR 286
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S I+ + + + N T+ + K +T R++VP+S+ G ++G+GG I E+
Sbjct: 66 TAIFKAFSMIIEKLEEDISSSMTNSTA--TSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G+ + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGTPQSII 156
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 13/71 (18%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
+ +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS
Sbjct: 244 EMTIPNDLIGCIIGRQGSKINEIRQMS-------GAQIKIANPVDGSADRQVTITGSPAS 296
Query: 540 ---SEHLISAH 547
+E+LI+A
Sbjct: 297 ISLAEYLINAR 307
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|195972875|ref|NP_001108030.2| insulin-like growth factor 2 mRNA-binding protein 2 [Danio rerio]
gi|124021198|gb|ABM88867.1| IGF2 mRNA-binding protein 2 [Danio rerio]
Length = 607
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 102/440 (23%), Positives = 180/440 (40%), Gaps = 81/440 (18%)
Query: 105 GIKKGNWSNSSREQ---------SFGNSQPA-DTVYRILCPSRKIGGVIGKAGNIVKSLR 154
G + +SREQ S G+ Q D R+L P++ +G +IGK G +K++
Sbjct: 165 GTRNRRGGRTSREQDSQPGTSGSSLGSRQKQPDFPLRMLVPTQFVGAIIGKEGLTIKNIT 224
Query: 155 EETQAKITV-ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDAL 213
++TQ+K+ + G+ E+ I I+S+P E C
Sbjct: 225 KQTQSKVDIHRKENAGAAEKPITIHSTP-------------------EGCSTACHM---- 261
Query: 214 LKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANI 273
+ D I++++ ++D I ++L N++VG L+GK G ++++ +T I
Sbjct: 262 --IMD-IMQKEAVDTKVTED------IPLKILAHNSLVGRLIGKEGRNLKKIEEDTETKI 312
Query: 274 RVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQN 333
+ L N + + + G RA E+ L + ++ N
Sbjct: 313 TISSLQDL--TIYNPERTIIVKGSIEACCRAEVEIMKKLRE---------AYENDVAAIN 361
Query: 334 FHSPPAPMADMHPLGNSSW------PARNSSLHGMPSTPWMG-----GYGDQPSRMGSGS 382
S P + LG S PA + G+P P G G+ Q G
Sbjct: 362 QQSNLIPGLSLSALGIFSTGLSVLPPA--AGPRGIPPVPPTGYNPFLGHSSQ-----LGG 414
Query: 383 INSCPPG-----QMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP 437
+ PP Q + + + + +G +IGK G ++KQL + GASI + AP
Sbjct: 415 LYGVPPASGISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--AP 472
Query: 438 TDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS--EKGTITTRLLVPSSKVGCIL 495
+S + R G + + I + + F+ E+ + T + VPSS G ++
Sbjct: 473 AESPDVTQRMVIITGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETHIKVPSSAAGRVI 532
Query: 496 GQGGHVINEMRRRTQADIRV 515
G+GG +NE++ T A++ V
Sbjct: 533 GKGGKTVNELQNLTSAEVIV 552
>gi|432906521|ref|XP_004077571.1| PREDICTED: poly(rC)-binding protein 3-like [Oryzias latipes]
Length = 434
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 83/359 (23%), Positives = 149/359 (41%), Gaps = 56/359 (15%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ GS I+ + PT
Sbjct: 19 LRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSSPERIVTITGPT------- 68
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLV 246
+ + + I EED+ M + + +T RL+
Sbjct: 69 ---------------------EGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVF 107
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ V ISG P + +
Sbjct: 108 PGSQCGSLIGKGGSKIKEIRETTGAQVQV-AGDMLPD---STERAVTISGTPQAITQCVR 163
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPL---GNSSWPARN-SSLH-- 360
+ +++ ++P K P+ H+ AP H G ++ ++ + LH
Sbjct: 164 HICSVMLESPPKGATIPYRPKILPA-GAHAVLAPQHSAHAFAIPGQYAFAHQDLTKLHQL 222
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNV 420
M P PS G N PG + ++ + ++ IG +IG+ G +
Sbjct: 223 AMQHIPL-------PSL---GQSNPTFPG-LDSSASTSTQELAIPNDLIGCIIGRQGSKI 271
Query: 421 KQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGT 479
+++Q +GA I + A S R + + + I+A L++ T + + T
Sbjct: 272 NEIRQVSGAHIKIASATDGSAVRQVTITGSPASISIAQYLINASLEMARYTMQAAASST 330
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/152 (29%), Positives = 81/152 (53%), Gaps = 12/152 (7%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-F 450
G ++ ++++L ++G +IGK G VK++++E+GA I++ + S ER++ +
Sbjct: 11 GSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTITGPT 68
Query: 451 EGLWNPRS---QTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
EG++ S Q + + S + K +T RL+ P S+ G ++G+GG I E+R
Sbjct: 69 EGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRE 128
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
T A ++V G D P S+E V I G+
Sbjct: 129 TTGAQVQVAG------DMLPDSTERAVTISGT 154
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 87/193 (45%), Gaps = 37/193 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYSS 180
S+P T+ R++ P + G +IGK G+ +K +RE T A++ VA D +P S ER + I +
Sbjct: 96 TSKPPVTL-RLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDSTERAVTISGT 154
Query: 181 PTKIAKTQNKDDDSAAETKKES-----------------MEP-HCA-----------AQD 211
P I + E+ + + P H A A
Sbjct: 155 PQAITQCVRHICSVMLESPPKGATIPYRPKILPAGAHAVLAPQHSAHAFAIPGQYAFAHQ 214
Query: 212 ALLKVHDRIIEEDLFGGMASDD------DNENSTITARLLVPNNMVGCLLGKRGDVIQRL 265
L K+H ++ + + D+ ST T L +PN+++GC++G++G I +
Sbjct: 215 DLTKLHQLAMQHIPLPSLGQSNPTFPGLDSSASTSTQELAIPNDLIGCIIGRQGSKINEI 274
Query: 266 RSETGANIRVLPA 278
R +GA+I++ A
Sbjct: 275 RQVSGAHIKIASA 287
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
MASD + N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 7 MASDG-SLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINI 52
Score = 38.9 bits (89), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 13/78 (16%)
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIV 534
S T T L +P+ +GCI+G+ G INE+R +V GA +K+ GS+ V
Sbjct: 244 SSASTSTQELAIPNDLIGCIIGRQGSKINEIR-------QVSGAHIKIASATDGSAVRQV 296
Query: 535 DIRGS------SEHLISA 546
I GS +++LI+A
Sbjct: 297 TITGSPASISIAQYLINA 314
>gi|327263854|ref|XP_003216732.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Anolis
carolinensis]
Length = 331
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 87/337 (25%), Positives = 146/337 (43%), Gaps = 78/337 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLG--NSSW 352
+ ++ ++P K +P PSS P QAY Q ++ P P + +H L S +
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHF 221
Query: 353 PARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMG-----EVSAE-FSMKILCSA 406
P HG G + S P + G + SA+ S ++
Sbjct: 222 PMS----HG---------------NTGFSGVESSSPDEKGYWAGLDASAQTTSHELTIPN 262
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
IG +IG+ G + +++Q +GA I + + S +R
Sbjct: 263 DLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 299
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ S + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--SSRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 253 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 305
Query: 539 SSEHL 543
S+ +
Sbjct: 306 SAASI 310
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|344282127|ref|XP_003412826.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Loxodonta africana]
Length = 599
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 171/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGASQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 320 NPERTITVKGTVEACATAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 370
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + G P Y P SG +S PP Q G S
Sbjct: 371 LGIFSTGLSVLPPPAGPRGAPPAPPY--HPFATHSGYFSSLYPPHQFGPFPHHHSYPEQE 428
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 429 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 488
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 489 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 543
Query: 514 RV 515
V
Sbjct: 544 IV 545
>gi|126314788|ref|XP_001377551.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2,
partial [Monodelphis domestica]
Length = 504
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 91/428 (21%), Positives = 179/428 (41%), Gaps = 80/428 (18%)
Query: 112 SNSSREQSF-----GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-AD 165
++SSRE+ G ++P D RIL P++ +G +IGK G +K+L ++TQ+K+ +
Sbjct: 74 ASSSRERGRSPGGSGQAKPPDFPLRILVPTQFVGAIIGKEGLTIKNLTKQTQSKVDIHRK 133
Query: 166 TIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL 225
G+ E+ + I++SP + ++E + +E I++++
Sbjct: 134 ENAGASEKPVTIHASP-----------EGSSEACRRILE---------------IMQKE- 166
Query: 226 FGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCA 285
+D+ + ++L N++VG L+GK G ++++ +TG I + P L
Sbjct: 167 -----ADETKAVEEVPLKILAHNSLVGRLIGKEGRNLKKIEQDTGTKITISPLQDL--TI 219
Query: 286 MNTDEMVQISGKPNVAKRALYEV---------STLLHQNPRKDKPPSSFPQAYG----GQ 332
N + + + G A E+ + +L N + P A G G
Sbjct: 220 YNPERTITVKGTIEACSSAEVEIMRKLREAYENDMLTVNQQGSLIPGLNLSALGIFSTGL 279
Query: 333 NFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMG 392
+ A + + + ++ L G+ P +G + Q + P ++
Sbjct: 280 SMLPSAAGPRGAAAASYNPFASHSAYLSGLYGAPQIGVFPHQ---------HPVPEQEV- 329
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV--EDAPTDSDERVIRASAF 450
+ + +G +IGK G ++KQL + ASI + + P + VI
Sbjct: 330 -------VYLFIPTQAVGAIIGKKGHHIKQLARFARASIKIAPAEGPDVGERMVIITGPP 382
Query: 451 EGLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
E + + + + K F E+ + + VPSS G ++G+GG +NE++
Sbjct: 383 EAQFKAQGRIFGKL-----KEENFFNPKEEVKLKAHIRVPSSAAGRVIGKGGKTVNELQN 437
Query: 508 RTQADIRV 515
T A++ V
Sbjct: 438 LTSAEVIV 445
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/206 (23%), Positives = 89/206 (43%), Gaps = 38/206 (18%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSSPTK 183
P V + P++ +G +IGK G+ +K L +A I +A P ER++II P
Sbjct: 325 PEQEVVYLFIPTQAVGAIIGKKGHHIKQLARFARASIKIAPAEGPDVGERMVIITGPPEA 384
Query: 184 IAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR 243
K Q + + ++ EE+ F + E + A
Sbjct: 385 QFKAQGR-------------------------IFGKLKEENFF------NPKEEVKLKAH 413
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---KPNV 300
+ VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 414 IRVPSSAAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVKIIGHFFASQT 470
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFP 326
A+R + E+ ++Q +K ++ P
Sbjct: 471 AQRKIREIVQQVNQQEQKHPQGAALP 496
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 84/183 (45%), Gaps = 16/183 (8%)
Query: 372 GDQPSRMGSGSINSCP----PGQMGEVSA-EFSMKILCSAGKIGGVIGKGGFNVKQL--Q 424
G P R G+ +S PG G+ +F ++IL +G +IGK G +K L Q
Sbjct: 64 GHAPQRFRRGASSSRERGRSPGGSGQAKPPDFPLRILVPTQFVGAIIGKEGLTIKNLTKQ 123
Query: 425 QETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQ-LQNKTSEFSEKGTITTR 483
++ IH ++ S++ V ++ EG S+ IL+ +Q + E + +
Sbjct: 124 TQSKVDIHRKENAGASEKPVTIHASPEG----SSEACRRILEIMQKEADETKAVEEVPLK 179
Query: 484 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+L +S VG ++G+ G + ++ + T I + LQD + E + ++G+ E
Sbjct: 180 ILAHNSLVGRLIGKEGRNLKKIEQDTGTKITI----SPLQDLTIYNPERTITVKGTIEAC 235
Query: 544 ISA 546
SA
Sbjct: 236 SSA 238
>gi|365766932|gb|EHN08421.1| Pbp2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 413
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 160/372 (43%), Gaps = 71/372 (19%)
Query: 104 VGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
V +K + S+S + ++ P+D R+LC + ++G G + ++ ET A+I +
Sbjct: 44 VALKDAD-SHSDNDHDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINI 102
Query: 164 ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE 223
++ I G ER++ + + +AK + ALL+ H
Sbjct: 103 SNNIRGVPERIVYVRGTCDDVAKA------------------YGMIVRALLEEH------ 138
Query: 224 DLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP 283
++D+ E+ I+ LL+P++++GC++GKRG ++ + + A + P L
Sbjct: 139 ------GNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL-- 190
Query: 284 CAMNTDEMVQISGKPNVAKRALYEVS-TLLH---QNPRKDKPPSSFPQAYGGQNF---HS 336
++ D ++ I+G P+ A + +S TLL+ ++P+K+ S + Q + HS
Sbjct: 191 --LSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHS 248
Query: 337 PPAPM-----ADMHPLGN--SSWPARN---SSLHGMPSTPWM------GGYGDQPS---- 376
P + HP S P +N SS +TP QP+
Sbjct: 249 QPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTXLSMATPQYTTASVANATAFQPNFVIP 308
Query: 377 --RMGSGSINSCPPGQ---MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASI 431
+ G + S PG M V E I +G VIGK G ++ +++ TG SI
Sbjct: 309 NVTVLDGPVISPAPGNHLLMNFVQQE----IFIDEKFVGNVIGKDGKHINSVKESTGCSI 364
Query: 432 HVEDAPTDSDER 443
++D S ER
Sbjct: 365 IIQDPVEGSSER 376
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF-EG 452
V ++ +++LC ++G G + +++ ET A I++ + ER++ +
Sbjct: 63 VPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDD 122
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ + A+L+ ++ + E I+ LL+P +GCI+G+ G + E+ + A
Sbjct: 123 VAKAYGMIVRALLE-EHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAK 181
Query: 513 I 513
+
Sbjct: 182 L 182
>gi|167614344|gb|ABZ89744.1| IGF-II mRNA-binding protein 2a [Danio rerio]
Length = 607
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 101/431 (23%), Positives = 178/431 (41%), Gaps = 81/431 (18%)
Query: 114 SSREQ---------SFGNSQPA-DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
+SREQ S G+ Q D R+L P++ +G +IGK G +K++ ++TQ+K+ +
Sbjct: 174 TSREQDSQPGTSGSSLGSRQKQPDFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDI 233
Query: 164 -ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIE 222
G+ E+ I I+S+P E C + D I++
Sbjct: 234 HRKENAGAAEKPITIHSTP-------------------EGCSTACHM------IMD-IMQ 267
Query: 223 EDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
++ ++D I ++L N++VG L+GK G ++++ +T I + L
Sbjct: 268 KEAVDTKVTED------IPLKILAHNSLVGRLIGKEGRNLKKIEEDTETKITISSLQDL- 320
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMA 342
N + + + G RA E+ L + ++ N S P
Sbjct: 321 -TIYNPERTIIVKGSIEACCRAEVEIMKKLRE---------AYENDVAAINQQSNLIPGL 370
Query: 343 DMHPLGNSSW------PARNSSLHGMPSTPWMG-----GYGDQPSRMGSGSINSCPPG-- 389
+ LG S PA + G+P P G G+ Q G + PP
Sbjct: 371 SLSALGIFSTGLSVLPPA--AGPRGIPPVPPTGYNPFLGHSSQ-----LGGLYGVPPASG 423
Query: 390 ---QMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
Q + + + + +G +IGK G ++KQL + GASI + AP +S + R
Sbjct: 424 ISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--APAESPDVTQR 481
Query: 447 ASAFEGLWNPRSQTIDAILQLQNKTSEFS--EKGTITTRLLVPSSKVGCILGQGGHVINE 504
G + + I + + F+ E+ + T + VPSS G ++G+GG +NE
Sbjct: 482 MVIITGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGKGGKTVNE 541
Query: 505 MRRRTQADIRV 515
++ T A++ V
Sbjct: 542 LQNLTSAEVIV 552
>gi|327265639|ref|XP_003217615.1| PREDICTED: poly(rC)-binding protein 4-like [Anolis carolinensis]
Length = 422
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 86/350 (24%), Positives = 142/350 (40%), Gaps = 54/350 (15%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S
Sbjct: 30 LRMLMHGKEVGSIIGKKGETVKRIREQSTARITISE---GSCPERITTITGS-------- 78
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLL 245
DA+ + I +EEDL G + +T RL+
Sbjct: 79 ---------------------TDAVFRAVSMIAFKLEEDLGTGAINGGTVSKPPVTLRLV 117
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+P + G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + +
Sbjct: 118 IPASQCGSLIGKAGAKIKEIRETTGAQVQV-AGDLLP---NSTERAVTVSGVPDAIIQCV 173
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWP--ARNSSLHGMP 363
++ ++ ++P K P G S + G S A+ L G P
Sbjct: 174 RQICAVILESPPKGATIPYHPNLSLGPVLLSANQGFSMQGQYGGISQAEVAKLQQLSGHP 233
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
+ G PS + N S S + L IG +IG+ G + ++
Sbjct: 234 VS--FSSLGQTPSIVAGLDTN----------SQNSSQEFLVPNDLIGCIIGRQGSKISEI 281
Query: 424 QQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSE 473
+Q +GA I + + S ER + + I A L+ TS+
Sbjct: 282 RQMSGAHIKIGNQTEGSAERHVTITGTPVSITLAQYLISACLETAKSTSQ 331
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/311 (23%), Positives = 124/311 (39%), Gaps = 54/311 (17%)
Query: 64 SCAFHLLSHSRCIRFCCIMDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNS 123
S A +S C + S F+ FK + +G N S+
Sbjct: 57 STARITISEGSCPERITTITGSTDAVFRAVSMIAFKLEEDLGTGAINGGTVSK------- 109
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYSSPT 182
P T+ R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + + P
Sbjct: 110 -PPVTL-RLVIPASQCGSLIGKAGAKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPD 167
Query: 183 KIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGGMAS------- 231
I + + E+ + P+ + LL + + +GG++
Sbjct: 168 AIIQCVRQICAVILESPPKGATIPYHPNLSLGPVLLSANQGFSMQGQYGGISQAEVAKLQ 227
Query: 232 ----------------------DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSET 269
D +++NS + LVPN+++GC++G++G I +R +
Sbjct: 228 QLSGHPVSFSSLGQTPSIVAGLDTNSQNS--SQEFLVPNDLIGCIIGRQGSKISEIRQMS 285
Query: 270 GANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAY 329
GA+I++ ++ A + V I+G P A Y +S L K S P
Sbjct: 286 GAHIKI--GNQTEGSA---ERHVTITGTPVSITLAQYLISACLE----TAKSTSQTPPVD 336
Query: 330 GGQNFHSPPAP 340
G F P P
Sbjct: 337 LGMTFSQPLTP 347
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 20/160 (12%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP--------TDSDERV 444
E+S ++++L ++G +IGK G VK++++++ A I + + T S + V
Sbjct: 23 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSTARITISEGSCPERITTITGSTDAV 82
Query: 445 IRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINE 504
RA + AI K +T RL++P+S+ G ++G+ G I E
Sbjct: 83 FRAVSMIAFKLEEDLGTGAI------NGGTVSKPPVTLRLVIPASQCGSLIGKAGAKIKE 136
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
+R T A ++V G D P S+E V + G + +I
Sbjct: 137 IRETTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 170
>gi|449450341|ref|XP_004142921.1| PREDICTED: uncharacterized protein LOC101216803 [Cucumis sativus]
gi|449494409|ref|XP_004159539.1| PREDICTED: uncharacterized LOC101216803 [Cucumis sativus]
Length = 694
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 91/188 (48%), Gaps = 27/188 (14%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
+I P+ ++G +IGK G +K L+ ++ AKI V D P S R++ + +P +IAK
Sbjct: 138 KIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQIAKA 197
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
+ +D +E + I+ L G S+ + +P
Sbjct: 198 EQLINDVLSEAESGG---------------SGIVSRRLTGPSGSEQ--------FVMKIP 234
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
NN VG ++GK G+ I+ +++ TGA I+V+P LPP +T+ +QI G + A
Sbjct: 235 NNKVGLVIGKGGETIKSMQARTGARIQVIPL-HLPPGDTSTERTLQIDGSSEQIESAKQL 293
Query: 308 VSTLLHQN 315
V+ ++ +N
Sbjct: 294 VNEVISEN 301
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 79/162 (48%), Gaps = 21/162 (12%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIRASAFEGLWN 455
S KI G++G +IGKGG +K LQ ++GA I V DA +S R++
Sbjct: 136 SKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSTTRMVELMGTPDQIA 195
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITTRLL-----------VPSSKVGCILGQGGHVINE 504
Q I+ +L +E G ++ RL +P++KVG ++G+GG I
Sbjct: 196 KAEQLINDVL----SEAESGGSGIVSRRLTGPSGSEQFVMKIPNNKVGLVIGKGGETIKS 251
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
M+ RT A I+V+ + D S+E + I GSSE + SA
Sbjct: 252 MQARTGARIQVIPLHLPPGD---TSTERTLQIDGSSEQIESA 290
>gi|147899778|ref|NP_001083390.1| far upstream element (FUSE) binding protein 3 [Xenopus laevis]
gi|38014650|gb|AAH60400.1| MGC68532 protein [Xenopus laevis]
Length = 546
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 82/330 (24%), Positives = 139/330 (42%), Gaps = 86/330 (26%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAK-ITVADT-IPGSEERVIIIYSSPTKIA 185
TV IL P+ K+G VIGK G +K L+E T K I + D +P ++ + I P K+
Sbjct: 164 TVQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDPFKVQ 223
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL--FGGMASDDDNENSTITAR 243
+ A+D +L++ I E+D F G+ SD + +
Sbjct: 224 Q----------------------ARDLVLEI---IREKDQADFRGIRSDFSSRIGGGSVE 258
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ VP VG ++G+ G++I++++++ G I+ P D L P + + Q+ G P+ +
Sbjct: 259 VSVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKPDDGLSP-----ERVAQVMGLPDRCQH 313
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
A + ++ L+ +D +GG + AR
Sbjct: 314 AAHIINELILTAQERD--------GFGGLSL-------------------AR-------- 338
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
G SR G N PG M E++ A K G VIGKGG N+K +
Sbjct: 339 --------GRGRSR---GDWNLSTPGSMQEIN------YTVPADKCGLVIGKGGENIKNI 381
Query: 424 QQETGASIHVEDAPTDSDERVIRASAFEGL 453
Q++GA + ++ P + + +R G+
Sbjct: 382 NQQSGAHVELQRNPPPNTDPAVRIFTIRGV 411
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 93/199 (46%), Gaps = 27/199 (13%)
Query: 353 PARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC--PPGQMGEVSAEFSMK-ILCSAGKI 409
P R L G P + +Q R+ ++ C PG ++ +++ IL A K+
Sbjct: 122 PERPCVLTGTPESI------EQAKRLLGQIVDRCRNGPGFHNDMDGSSTVQEILIPASKV 175
Query: 410 GGVIGKGGFNVKQLQQETGAS-IHVEDA--PTDSDERV-IRASAFEGLWNPRSQTIDAIL 465
G VIGKGG +KQLQ+ TG I ++D PT +D+ + I F+ + R ++ I
Sbjct: 176 GLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDPFK-VQQARDLVLEIIR 234
Query: 466 Q-----LQNKTSEFSEK-GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGAR 519
+ + S+FS + G + + VP VG I+G+ G EM ++ Q D G R
Sbjct: 235 EKDQADFRGIRSDFSSRIGGGSVEVSVPRFAVGIIIGRNG----EMIKKIQND---AGVR 287
Query: 520 VKLQDPHPGSSECIVDIRG 538
++ + S E + + G
Sbjct: 288 IQFKPDDGLSPERVAQVMG 306
Score = 42.4 bits (98), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 9/107 (8%)
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQ 468
+G +IG+GG + ++Q E+G I + AP DS R G Q + Q+
Sbjct: 90 VGFIIGRGGEQISRIQAESGCKIQI--AP-DSGGMPERPCVLTGTPESIEQAKRLLGQIV 146
Query: 469 NKTSEF------SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + + +L+P+SKVG ++G+GG I +++ RT
Sbjct: 147 DRCRNGPGFHNDMDGSSTVQEILIPASKVGLVIGKGGETIKQLQERT 193
>gi|62858479|ref|NP_001017139.1| insulin-like growth factor 2 mRNA binding protein 3 [Xenopus
(Silurana) tropicalis]
gi|89272857|emb|CAJ82142.1| IGF-II mRNA-binding protein 3 (imp-3) [Xenopus (Silurana)
tropicalis]
Length = 594
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 158/391 (40%), Gaps = 69/391 (17%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L P++ +G +IGK G ++++ ++TQ+KI + G+ E+ I I+S+P
Sbjct: 209 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTP-------- 260
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
E C K+ I++++ + D I ++L NN
Sbjct: 261 -----------EGCSAAC-------KIIMEIMQKE------AQDTKFTEEIPLKILAHNN 296
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VG L+GK G ++++ +T I + P L N + + + G +A E+
Sbjct: 297 FVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIEACAKAEEEIM 354
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMG 369
+ + S+ N + P +++ L G+ G
Sbjct: 355 KKIRE---------SYENDIAAMNLQAHLIPGLNLNAL-------------GLFPPSSSG 392
Query: 370 GYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGA 429
+ S PP G+ ++ + A +G +IGK G ++KQL + GA
Sbjct: 393 MPPPSVGVPSPTTSTSYPP--FGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGA 450
Query: 430 SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EKGTITTRL 484
SI + AP + + +R G P A ++ K E + E+ + +
Sbjct: 451 SIKI--APAEGPDAKLRMVIITG---PPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHI 505
Query: 485 LVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
VPS G ++G+GG +NE++ T A++ V
Sbjct: 506 KVPSYAAGRVIGKGGKTVNELQNLTSAEVVV 536
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 39/193 (20%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIY 178
FG ++TV+ + P+ +G +IGK G +K L A I +A P ++ R++II
Sbjct: 412 FGQQPESETVH-LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 470
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
P K Q +++ ++ EE+ FG E
Sbjct: 471 GPPEAQFKAQG-------------------------RIYGKLKEENFFG------PKEEV 499
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-- 296
+ A + VP+ G ++GK G + L++ T A + V+P D+ P N +V+I+G
Sbjct: 500 KLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 556
Query: 297 -KPNVAKRALYEV 308
+A+R + E+
Sbjct: 557 YASQLAQRKIQEI 569
>gi|238836388|gb|ACR61402.1| IGF-II mRNA-binding protein 2a variant C [Danio rerio]
Length = 453
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 102/431 (23%), Positives = 177/431 (41%), Gaps = 81/431 (18%)
Query: 114 SSREQ---------SFGNSQPA-DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
+SREQ S G+ Q D R+L P++ +G +IGK G +K++ ++TQ+K+ +
Sbjct: 20 TSREQDSQPGTSGSSLGSRQKQPDFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDI 79
Query: 164 -ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIE 222
G+ E+ I I+S+P E C + D I++
Sbjct: 80 HRKENAGAAEKPITIHSTP-------------------EGCSTACHM------IMD-IMQ 113
Query: 223 EDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
++ ++D I ++L N++VG L+GK G ++++ +T I + L
Sbjct: 114 KEAVDTKVTED------IPLKILAHNSLVGRLIGKEGRNLKKIEEDTETKITISSLQDL- 166
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMA 342
N + + + G RA E+ L + D N S P
Sbjct: 167 -TIYNPERTIIVKGSIEACCRAEVEIMKKLREAYEND---------VAAINQQSNLIPGL 216
Query: 343 DMHPLGNSSW------PARNSSLHGMPSTPWMG-----GYGDQPSRMGSGSINSCPPG-- 389
+ LG S PA + G+P P G G+ Q G + PP
Sbjct: 217 SLSALGIFSTGLSVLPPA--AGPRGIPPVPPTGYNPFLGHSSQ-----LGGLYGVPPASG 269
Query: 390 ---QMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
Q + + + + +G +IGK G ++KQL + GASI + AP +S + R
Sbjct: 270 ISHQHTQAPEQEVVYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--APAESPDVTQR 327
Query: 447 ASAFEGLWNPRSQTIDAILQLQNKTSEFS--EKGTITTRLLVPSSKVGCILGQGGHVINE 504
G + + I + + F+ E+ + T + VPSS G ++G+GG +NE
Sbjct: 328 MVIITGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGKGGKTVNE 387
Query: 505 MRRRTQADIRV 515
++ T A++ V
Sbjct: 388 LQNLTSAEVIV 398
>gi|72164650|ref|XP_794805.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 341
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 92/161 (57%), Gaps = 21/161 (13%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
++ + ++L S+ K GGVIGKGG N+K+L+ E A++++ D + +RV++ A N
Sbjct: 7 SQVTFRLLVSSNKAGGVIGKGGQNIKRLRSEYNATVNIPD--SSGPDRVLQIVA-----N 59
Query: 456 PRSQTIDAILQL----QNKTSEFSEKG----TITTRLLVPSSKVGCILGQGGHVINEMRR 507
R +D I +L + + S FS+ T T +LV +S+VG I+G+GG I E+R+
Sbjct: 60 SRENGLDIIKELIPLIREEVSPFSDGEADPYTTTLSVLVQTSQVGAIIGRGGSKIKELRQ 119
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHG 548
T+ ++V LQ+ P S+E V I G+ + ++ A G
Sbjct: 120 STETKVKV------LQECLPYSTERRVQINGAPDAVLLAIG 154
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 85/189 (44%), Gaps = 33/189 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+R+L S K GGVIGK G +K LR E A + + D+ S P ++ +
Sbjct: 11 FRLLVSSNKAGGVIGKGGQNIKRLRSEYNATVNIPDS------------SGPDRVLQIVA 58
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
++ + KE + +I E++ SD + + T T +LV +
Sbjct: 59 NSRENGLDIIKELIP---------------LIREEV--SPFSDGEADPYTTTLSVLVQTS 101
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VG ++G+ G I+ LR T ++VL + LP +T+ VQI+G P+ A+ E+
Sbjct: 102 QVGAIIGRGGSKIKELRQSTETKVKVL-QECLP---YSTERRVQINGAPDAVLLAIGEIY 157
Query: 310 TLLHQNPRK 318
+ P K
Sbjct: 158 VTCSEAPIK 166
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 39/61 (63%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T ++ P+ +G VIG+ G ++++R +QA+I +A+ +P +E+RVI I + +++
Sbjct: 266 TTTQVTIPNDLVGAVIGRGGERIRNIRSRSQAEIEIANPLPEAEDRVITIRGTQEQVSHA 325
Query: 188 Q 188
Q
Sbjct: 326 Q 326
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
TT++ +P+ VG ++G+GG I +R R+QA+I + +P P + + ++ IRG+
Sbjct: 267 TTQVTIPNDLVGAVIGRGGERIRNIRSRSQAEIEIA-------NPLPEAEDRVITIRGTQ 319
Query: 541 EHLISAHGTYQSFM 554
E + A Q+ +
Sbjct: 320 EQVSHAQFLLQNCI 333
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIII 177
S G + P T +L + ++G +IG+ G+ +K LR+ T+ K+ V + +P S ER + I
Sbjct: 83 SDGEADPYTTTLSVLVQTSQVGAIIGRGGSKIKELRQSTETKVKVLQECLPYSTERRVQI 142
Query: 178 YSSPTKI 184
+P +
Sbjct: 143 NGAPDAV 149
>gi|395752934|ref|XP_002830848.2| PREDICTED: poly(rC)-binding protein 3 [Pongo abelii]
Length = 432
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 70/251 (27%), Positives = 113/251 (45%), Gaps = 63/251 (25%)
Query: 138 KIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAE 197
++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 54 EVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT--------------- 95
Query: 198 TKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVPNNMVGCL 254
DA+ K I EED+ M++ +T RL+VP + G L
Sbjct: 96 -------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSL 142
Query: 255 LGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + ++ ++ +
Sbjct: 143 IGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLE 198
Query: 315 NPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMH----------PLG--N 349
+P K +P P+S P QAY Q ++ P P + +H PLG N
Sbjct: 199 SPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTN 258
Query: 350 SSWPARNSSLH 360
++P LH
Sbjct: 259 PAFPGEKLPLH 269
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 99/225 (44%), Gaps = 30/225 (13%)
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
++G +IGK G VK++++E+GA I++ + + ER++ + P A +
Sbjct: 54 EVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTIT------GPTDAIFKAFAMI 105
Query: 468 QNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
K E + K +T RL+VP+S+ G ++G+GG I E+R T A ++V G
Sbjct: 106 AYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG 165
Query: 518 ARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS----GQSMKVQPSSYQNINPQ 573
D P S+E V I G+ + +I M G ++ +P P
Sbjct: 166 ------DMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPAS--TPV 217
Query: 574 QSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSYP 618
+ + Q Y + + H++ QQ+P+ + ++P
Sbjct: 218 IFAGGQAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPLGQTNPAFP 262
Score = 47.4 bits (111), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 115 SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEER 173
S S S+P T+ R++ P+ + G +IGK G+ +K +RE T A++ VA D +P S ER
Sbjct: 116 SMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAGDMLPNSTER 174
Query: 174 VIIIYSSPTKI 184
+ I +P I
Sbjct: 175 AVTISGTPDAI 185
>gi|449265657|gb|EMC76819.1| Poly(rC)-binding protein 3 [Columba livia]
Length = 343
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 97/211 (45%), Gaps = 44/211 (20%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ GS I+ + PT
Sbjct: 19 IRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSCPERIVTITGPT------- 68
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLV 246
DA+ K I EED+ M + +T RL+V
Sbjct: 69 ---------------------DAIFKAFSMIALKFEEDINASMTNSTVTSKPPVTLRLVV 107
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + +
Sbjct: 108 PASQCGSLIGKGGSKIKEIRESTGAQVQV-AGDMLP---NSTERAVTISGTPDAIIQCVK 163
Query: 307 EVSTLLHQNPRKD-----KP-PSSFPQAYGG 331
++ ++ ++P K +P P+S P + G
Sbjct: 164 QICVVMLESPPKGATIPYRPKPASAPIIFAG 194
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G ++ ++++L ++G +IGK G VK++++E+GA I++ + ER++ +
Sbjct: 11 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SCPERIVTITGPT 68
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + I+A + S + K +T RL+VP+S+ G ++G+GG I
Sbjct: 69 DAIFKAFSMIALKFEEDINASM----TNSTVTSKPPVTLRLVVPASQCGSLIGKGGSKIK 124
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 125 EIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 159
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ +K N+S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 72 FKAFSMIALKFEEDINASMTNSTVTSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 130
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKI 184
A++ VA D +P S ER + I +P I
Sbjct: 131 GAQVQVAGDMLPNSTERAVTISGTPDAI 158
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 14 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINI 52
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 13/71 (18%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
L +P+ +GCI+G+ G INE+R+ + GA++K+ + GS+E V I GS
Sbjct: 280 ELTIPNDLIGCIIGRQGSKINEIRQMS-------GAQIKIANATEGSAERQVTITGSPAN 332
Query: 540 ---SEHLISAH 547
+++LI+A
Sbjct: 333 ISLAQYLINAR 343
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ 188
+ + P+ IG +IG+ G+ + +R+ + A+I +A+ GS ER + I SP I+ Q
Sbjct: 279 HELTIPNDLIGCIIGRQGSKINEIRQMSGAQIKIANATEGSAERQVTITGSPANISLAQ 337
>gi|410899813|ref|XP_003963391.1| PREDICTED: poly(rC)-binding protein 4-like [Takifugu rubripes]
Length = 447
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/336 (25%), Positives = 149/336 (44%), Gaps = 56/336 (16%)
Query: 117 EQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERV 174
EQ FG T+ R+L +++G +IGK G VK +REE+ A++ +++ GS ER+
Sbjct: 4 EQDFGEGGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISE---GSCPERI 60
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD 234
I I S C + + H +EEDL +A+
Sbjct: 61 ITITGST------------------------DCVFRAFTMITHK--LEEDLAALVANGTI 94
Query: 235 NENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
+ +T RL++P + G L+GK G I+ +R TGA I+V D LP +T+ V I
Sbjct: 95 STKPPVTLRLVIPASQCGSLIGKGGAKIKEIRESTGAQIQV-AGDLLP---NSTERGVTI 150
Query: 295 SGKPNVAKRALYEVSTLLHQNPRKDKP----PSSFPQAY---GGQNFHSPPAPMADMHPL 347
SG + + + + T++ ++P K PS P A G Q F + M+ +
Sbjct: 151 SGNQDSVIQCVKLICTVILESPPKGATIPYRPSPSPAAVLIAGNQLFDASEFATHPMYSV 210
Query: 348 GNSSWPARNS----SLHGMPSTPWMGGY------GDQPSRMGSGSINSCPPGQMGEVSAE 397
+ + + +G+P + + G P + ++ P G + +++
Sbjct: 211 AQGGLDLQQAYTLQNQYGIPHSELAKLHQLSMQQGLNPIAQPASTV--IPAGM--DSNSQ 266
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
S ++L IG +IG+ G + +++Q +GA I +
Sbjct: 267 TSQELLIPNDLIGSIIGRQGTKINEIRQVSGAQIKI 302
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 85/161 (52%), Gaps = 20/161 (12%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS--- 448
G + ++++L ++G +IGK G VK++++E+ A +++ + ER+I +
Sbjct: 10 GGLGVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARVNISEG--SCPERIITITGST 67
Query: 449 -----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
AF + + + + A++ N T S K +T RL++P+S+ G ++G+GG I
Sbjct: 68 DCVFRAFTMITHKLEEDLAALVA--NGT--ISTKPPVTLRLVIPASQCGSLIGKGGAKIK 123
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A I+V G D P S+E V I G+ + +I
Sbjct: 124 EIRESTGAQIQVAG------DLLPNSTERGVTISGNQDSVI 158
>gi|307199010|gb|EFN79734.1| Poly(rC)-binding protein 3 [Harpegnathos saltator]
Length = 469
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 92/331 (27%), Positives = 151/331 (45%), Gaps = 44/331 (13%)
Query: 122 NSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYS 179
N P+ T+ R++ +++G +IGK G IVK REE+ AKI ++D GS ER++ +
Sbjct: 8 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTG 64
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
I K A + E C+ + HD GG S
Sbjct: 65 PTNSIFK--------AFTLICKKFEEWCS------QFHDIQGGGAGGGGGVSRPP----- 105
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
IT RL+VP + G L+GK G I+ +R TGA+I+V ++ LP +T+ V ISG
Sbjct: 106 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTISGTSE 161
Query: 300 VAKRALYEVSTLLHQNPRKD-------KPPSSFP------QAYGGQNFHSPPAPMADMHP 346
+ +Y + ++ ++P K KP P QAY Q ++ PA +DM
Sbjct: 162 AITQCIYHICCVMLESPPKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPA-HSDMGK 220
Query: 347 LGNSSWPARNSSLHGMPSTPW-MGGYGDQPSRMGSGS-INSCPPGQMGEVSAEFSMKILC 404
LG++ + + G +TP GG +GS + + + + + ++
Sbjct: 221 LGSNPLASLAALGLGGLATPANTGGLNPAALAALAGSQLRTSNTNRQQPAANNQTHEMTV 280
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
IG +IGKGG + +++Q +GA I + +
Sbjct: 281 PNELIGCIIGKGGTKIAEIRQISGAMIRISN 311
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 31/166 (18%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G VK+ ++E+GA I++ D ER++ +
Sbjct: 12 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG----- 64
Query: 455 NPRSQTIDAILQLQNKTSEFSE-----------------KGTITTRLLVPSSKVGCILGQ 497
P + A + K E+ + IT RL+VP+S+ G ++G+
Sbjct: 65 -PTNSIFKAFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGK 123
Query: 498 GGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
GG I E+R T A I+V + P S+E V I G+SE +
Sbjct: 124 GGSKIKEIREVTGASIQVASEML------PNSTERAVTISGTSEAI 163
>gi|213511793|ref|NP_001133381.1| poly(rC)-binding protein 2 [Salmo salar]
gi|209152662|gb|ACI33123.1| PolyrC-binding protein 2 [Salmo salar]
Length = 327
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 143/334 (42%), Gaps = 74/334 (22%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
A+ K II EED+ M + +T R++V
Sbjct: 66 ---------------------TAIFKAFSMIIEKLEEDISSSMTNSTATSKPPVTLRIVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGTPQSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAPMADMHPLGNSSWPA 354
++ ++ ++P K +P PS P QAY Q H+ P P + ++S
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDSS-----SASISP 215
Query: 355 RNSSLH--GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF---SMKILCSAGKI 409
+ + LH M +P+ G + PG G + A S ++ I
Sbjct: 216 QLTKLHQLAMQQSPFPMGPNN--------------PGFQGGMDASAQTSSHEMTIPNDLI 261
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
G +IG+ G + +++Q +GA I + + S +R
Sbjct: 262 GCIIGRQGSKINEIRQMSGAQIKIANPVEGSADR 295
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S I+ + + + N T+ + K +T R++VP+S+ G ++G+GG I E+
Sbjct: 66 TAIFKAFSMIIEKLEEDISSSMTNSTA--TSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G+ + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGTPQSII 156
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 13/71 (18%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
+ +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS
Sbjct: 253 EMTIPNDLIGCIIGRQGSKINEIRQMS-------GAQIKIANPVEGSADRQVTITGSAAS 305
Query: 540 ---SEHLISAH 547
+E+LI+A
Sbjct: 306 ISLAEYLINAR 316
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|327263852|ref|XP_003216731.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Anolis
carolinensis]
Length = 360
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 91/357 (25%), Positives = 152/357 (42%), Gaps = 89/357 (24%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHSPPAPMADMHPLGNSSWP------A 354
+ ++ ++P K +P PSS P + GGQ+ +S G++S+P
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSS----------GSASYPHTAPSMC 211
Query: 355 RNSSLHGMPSTPWM--GGYG-DQP-------------------SRMGSGSINSCPPGQMG 392
NS L G P + G Y QP G + S P + G
Sbjct: 212 LNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGVESSSPDEKG 271
Query: 393 -----EVSAE-FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ SA+ S ++ IG +IG+ G + +++Q +GA I + + S +R
Sbjct: 272 YWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 328
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ S + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--SSRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 282 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 334
Query: 539 SSEHL 543
S+ +
Sbjct: 335 SAASI 339
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|410900025|ref|XP_003963497.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 318
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 79/327 (24%), Positives = 139/327 (42%), Gaps = 69/327 (21%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ ER+I + T I K
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTSIFK--- 70
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
A + +++ EED+ M + +T RL+VP +
Sbjct: 71 ----------------------AFSMIIEKL-EEDISTSMTNSTATSKPPVTIRLVVPAS 107
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R GA ++V D LP +T+ + I+G P + ++
Sbjct: 108 QCGSLIGKGGCKIKEIRESAGAQVQV-AGDMLPN---STERAITIAGTPQSIIECVKQIC 163
Query: 310 TLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLGNSSWPARN 356
++ ++P K +P PS P QAY Q H+ P P + +H L
Sbjct: 164 VVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQL--------- 214
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
M +P+ + +Q + G M + S ++ IG +IG+
Sbjct: 215 ----AMQQSPFPIAHSNQGFQAG-----------MDASAQTGSHELTIPNDLIGCIIGRQ 259
Query: 417 GFNVKQLQQETGASIHVEDAPTDSDER 443
G + +++Q +GA I + + S +R
Sbjct: 260 GAKINEIRQMSGAQIKIANPVEGSTDR 286
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 101/231 (43%), Gaps = 37/231 (16%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSE 171
++S S S+P T+ R++ P+ + G +IGK G +K +RE A++ VA D +P S
Sbjct: 84 STSMTNSTATSKPPVTI-RLVVPASQCGSLIGKGGCKIKEIRESAGAQVQVAGDMLPNST 142
Query: 172 ERVIIIYSSPTKIAKTQNKDDDSAAET----------KKESMEP--------------HC 207
ER I I +P I + + E+ K S P H
Sbjct: 143 ERAITIAGTPQSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHA 202
Query: 208 AAQDALLKVHDRIIEEDLF------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV 261
Q L K+H +++ F G + D T + L +PN+++GC++G++G
Sbjct: 203 IPQPDLTKLHQLAMQQSPFPIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCIIGRQGAK 262
Query: 262 IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
I +R +GA I++ P +TD V I+G A Y ++ L
Sbjct: 263 INEIRQMSGAQIKI-----ANPVEGSTDRQVTITGSHASISLAEYLINARL 308
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 85/157 (54%), Gaps = 12/157 (7%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAI---LQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
++ S I+ + + S + K +T RL+VP+S+ G ++G+GG I E+R
Sbjct: 66 TSIFKAFSMIIEKLEEDISTSMTNSTATSKPPVTIRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
A ++V G D P S+E + I G+ + +I
Sbjct: 126 SAGAQVQVAG------DMLPNSTERAITIAGTPQSII 156
Score = 42.0 bits (97), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 13/71 (18%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS
Sbjct: 244 ELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITGSHAS 296
Query: 540 ---SEHLISAH 547
+E+LI+A
Sbjct: 297 ISLAEYLINAR 307
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|378726019|gb|EHY52478.1| hypothetical protein HMPREF1120_00690 [Exophiala dermatitidis
NIH/UT8656]
Length = 365
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 82/333 (24%), Positives = 145/333 (43%), Gaps = 44/333 (13%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVII 176
E+ + SQ R + +++ G +IGKAG V LREET K V+ + G +RV+
Sbjct: 38 EEDYAQSQ---LTLRAIVSTKEAGVIIGKAGKNVADLREETGVKAGVSKVVQGVHDRVLT 94
Query: 177 IYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE 236
+ + IAK + LL+ ++ GM N
Sbjct: 95 VTGPLSGIAKA------------------YSLVAKGLLEGAPQV-------GMGGVVQN- 128
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T RLL+ +N +G ++G++G I+ ++ +G +R++ + P +T+ +V++ G
Sbjct: 129 NGTHPIRLLISHNQMGTIIGRQGLKIKHIQDVSG--VRMVAQKEMLP--QSTERIVEVQG 184
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN 356
P +A++E+ L + ++ + A Q S P P P PA N
Sbjct: 185 TPEGIDKAVWEIGKCLVDDWQRGTGTVLYNPAVRVQ-VGSGPLP-----PAVGGGLPAGN 238
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF----SMKILCSAGKIGGV 412
+ + G S G D G N P G + V+ + + I A +G +
Sbjct: 239 NYIGGGRSYNRTGNGADFSESRGYTRGNDLPRGGIPMVTEDGEEVQTQNISIPADMVGCI 298
Query: 413 IGKGGFNVKQLQQETGASIHVEDAP-TDSDERV 444
IG+GG + ++++ +GA I + AP D+ ER+
Sbjct: 299 IGRGGSKISEIRKTSGARISIAKAPHDDTGERM 331
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 74/155 (47%), Gaps = 10/155 (6%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLW 454
++ +++ + S + G +IGK G NV L++ETG V +RV+ + G+
Sbjct: 44 SQLTLRAIVSTKEAGVIIGKAGKNVADLREETGVKAGVSKVVQGVHDRVLTVTGPLSGIA 103
Query: 455 NPRSQTIDAILQLQNKTSE---FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
S +L+ + GT RLL+ +++G I+G+ G I + + +
Sbjct: 104 KAYSLVAKGLLEGAPQVGMGGVVQNNGTHPIRLLISHNQMGTIIGRQGLKIKHI--QDVS 161
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
+R+V + L P S+E IV+++G+ E + A
Sbjct: 162 GVRMVAQKEML----PQSTERIVEVQGTPEGIDKA 192
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
M ++D E T + +P +MVGC++G+ G I +R +GA I + A P
Sbjct: 275 MVTEDGEE--VQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISIAKA----PHDDTG 328
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNPRKDK 320
+ M I G + +RALY LL++N +K
Sbjct: 329 ERMFTIMGSASANERALY----LLYENLEAEK 356
>gi|196001809|ref|XP_002110772.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
gi|190586723|gb|EDV26776.1| hypothetical protein TRIADDRAFT_54022 [Trichoplax adhaerens]
Length = 560
Score = 75.9 bits (185), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 102/402 (25%), Positives = 179/402 (44%), Gaps = 61/402 (15%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIYSSPTKIAKTQ 188
RIL P+ +G +IG+ GN ++S+ ++TQA++ V +++ GS E+ I I +P
Sbjct: 141 RILVPTEMVGAIIGREGNTIRSITQQTQARVDVHRRESL-GSAEKAITILGTPDSCT--- 196
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
SAA + M+ + + LK + + + I ++L N
Sbjct: 197 -----SAALQIAKIMQSELLSTNPQLK-------------LKVEQGHPIPNIPLKILAHN 238
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
N++G L+GK G+VI+ + ++T + I + + L ++ + + G + RA +
Sbjct: 239 NLIGRLIGKNGNVIKSIMNQTNSKITISKLEDLKSGY--SERTITVIGTVENSSRAEALL 296
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWM 368
S L ++D S PQ G + +PL NS+ + + S
Sbjct: 297 SAKLRSYYKQDM-ASMIPQRQG--QSSANSNSNGSSYPLSNSTTSSVSDS---------- 343
Query: 369 GGYGDQPSRMGSGSINSCPPGQMGEVSAEF------SMKILCSAGKI-----GGVIGKGG 417
G D + + SI + P G S S +I +A I VIG G
Sbjct: 344 GSLIDSAA-ISPLSIPNSPSGLFSNNSVFLENDNVQSDEIETTAIYIPIQTFNYVIGARG 402
Query: 418 FNVKQLQQETGASIH-VEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF-- 474
+ L+Q +GAS+ V+ + ++ER + + N SQ A L + NK E
Sbjct: 403 NQLPALEQISGASLQLVQSMYSGANERKVVVNG-----NASSQW-KAQLSIFNKVGEGLT 456
Query: 475 -SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
SE+ ++ T +LVPS VG I+G+GG + +++ +T A I +
Sbjct: 457 PSEELSLRTEILVPSPLVGRIIGKGGSTVRQLQSQTGAMIEI 498
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 75/156 (48%), Gaps = 14/156 (8%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT-DSDERVI---------R 446
EF ++IL +G +IG+ G ++ + Q+T A + V + S E+ I
Sbjct: 137 EFPLRILVPTEMVGAIIGREGNTIRSITQQTQARVDVHRRESLGSAEKAITILGTPDSCT 196
Query: 447 ASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMR 506
++A + +S+ + QL+ K + I ++L ++ +G ++G+ G+VI +
Sbjct: 197 SAALQIAKIMQSELLSTNPQLKLKVEQGHPIPNIPLKILAHNNLIGRLIGKNGNVIKSIM 256
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEH 542
+T + I + KL+D G SE + + G+ E+
Sbjct: 257 NQTNSKITI----SKLEDLKSGYSERTITVIGTVEN 288
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
Query: 395 SAEFSMK--ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDE 442
S E S++ IL + +G +IGKGG V+QLQ +TGA I + D D+
Sbjct: 458 SEELSLRTEILVPSPLVGRIIGKGGSTVRQLQSQTGAMIEIPRGMADGDK 507
>gi|397470081|ref|XP_003806662.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Pan paniscus]
gi|179479866|gb|ACB86625.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 542
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 171/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 117 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 176
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 177 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 205
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 206 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 262
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 263 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 313
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + S G P Y P SG +S P Q G S
Sbjct: 314 LGIFSTGLSVLSPPAGPRGAPPAAPY--HPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQE 371
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 372 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 431
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 432 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 486
Query: 514 RV 515
V
Sbjct: 487 IV 488
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 365 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 424
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 425 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 453
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 454 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 510
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 511 SQTAQRKIREI 521
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 106 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 161
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 162 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 218
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 219 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 274
Query: 541 EHLISA 546
E SA
Sbjct: 275 EACASA 280
>gi|402860705|ref|XP_003894763.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Papio anubis]
Length = 542
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 171/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 117 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 176
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 177 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 205
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 206 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 262
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 263 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 313
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + S G P Y P SG +S P Q G S
Sbjct: 314 LGIFSTGLSVLSPPAGPRGAPPAAPY--HPFATHSGYFSSLYPHHQFGPFPHHHSYPEQE 371
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 372 VVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 431
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 432 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 486
Query: 514 RV 515
V
Sbjct: 487 IV 488
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P V + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 365 HSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 424
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 425 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 453
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 454 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 510
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 511 SQTAQRKIREI 521
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 106 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 161
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 162 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 218
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 219 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 274
Query: 541 EHLISA 546
E SA
Sbjct: 275 EACASA 280
>gi|401838485|gb|EJT42099.1| PBP2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 416
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 150/368 (40%), Gaps = 80/368 (21%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEE 172
+S E+ F ++ P+ R+LC + ++G G + ++ ET A+I V++ I G E
Sbjct: 55 HSDNERDFTDNLPSHVHLRMLCLVKHASLIVGHKGATISRIKSETSARINVSNNIRGVPE 114
Query: 173 RVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASD 232
R+I + + +AK +I L ++
Sbjct: 115 RIIYVRGTCDDVAKAYG------------------------------MIVRALLEEHENE 144
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
+ E+ ++ LL+P++++GC++GKRG ++ + + A + P L ++ D ++
Sbjct: 145 SEEEDIEVSINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL----LSNDRIL 200
Query: 293 QISGKPNVAKRALYEV-STLLH---QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG 348
I+G P+ A + V TLL+ ++P+K S F Y F+S + D H
Sbjct: 201 TINGVPDAIHIATFYVGQTLLNFQIESPQKKLKRSIF---YQPTQFNS---VLLD-HSQS 253
Query: 349 NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPP-------------------- 388
N+ RN H P+ + ++ + S ++ PP
Sbjct: 254 NAVLHQRNHQYH--PNDKLLSCRPNRKFSVSSTLLSMAPPQYTTASVANATAFHPNFVIP 311
Query: 389 ------------GQMGEVSAE-FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
G +S F +I +G VIGK G ++ +++ TG SI V+D
Sbjct: 312 NVRILDAPVIDQGPSNHLSMNLFQQEIFIDENFVGNVIGKDGKHINSVKESTGCSIIVQD 371
Query: 436 APTDSDER 443
+ S ER
Sbjct: 372 SVEGSSER 379
>gi|74215286|dbj|BAE41861.1| unnamed protein product [Mus musculus]
Length = 530
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 191/493 (38%), Gaps = 102/493 (20%)
Query: 115 SREQSFG-----NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIP 168
+REQ G ++ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 107 AREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS 166
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
G+ E+ + I+++P E A +L++ +
Sbjct: 167 GAAEKPVTIHATP----------------------EGTSEACRMILEIMQK--------- 195
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+D+ + ++L N VG L+GK G ++++ ETG I + L N
Sbjct: 196 -EADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNP 252
Query: 289 DEMVQISGKPNVAKRALYEV---------STLLHQNPRKDKPPSSFPQAYG----GQNFH 335
+ + + G A E+ + +L N + + P A G G +
Sbjct: 253 ERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVL 312
Query: 336 SPPA------PMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPG 389
PPA P HP S SSL+ + P +
Sbjct: 313 PPPAGPRGVPPSPPYHPFATHS--GYFSSLYPHHHFGPFPHHHSYPEQE----------- 359
Query: 390 QMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA--PTDSDERVIRA 447
++ + +G +IGK G ++KQL + GASI + A P S+ VI
Sbjct: 360 ---------TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIIT 410
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINE 504
E + + + + K F E+ + + VPSS G ++G+GG +NE
Sbjct: 411 GPPEAQFKAQGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 465
Query: 505 MRRRTQADIRVVGARVKLQDPHPG-SSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQ 563
++ T A++ V +D P + E IV I G H ++ + Q +K Q
Sbjct: 466 LQNLTSAEVIVP------RDQTPDENEEVIVRIIG---HFFASQTAQRKVREIVQQVKQQ 516
Query: 564 PSSY-QNINPQQS 575
Y Q + PQ+S
Sbjct: 517 EQRYPQGVAPQRS 529
>gi|354490193|ref|XP_003507244.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cricetulus
griseus]
Length = 331
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 85/334 (25%), Positives = 144/334 (43%), Gaps = 72/334 (21%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLG--NSSW 352
+ ++ ++P K +P PSS P QAY Q ++ P P + +H L S +
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHF 221
Query: 353 PAR--NSSLHGMP-STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
P N+ G+ S+P + GY + + S ++ I
Sbjct: 222 PMTHGNTGFSGIESSSPEVKGYW----------------AGLDASAQTTSHELTIPNDLI 265
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
G +IG+ G + +++Q +GA I + S +R
Sbjct: 266 GCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDR 299
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
Score = 39.7 bits (91), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K +P GS++ V I G
Sbjct: 253 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKTANPVEGSTDRQVTITG 305
Query: 539 SSEHL 543
S+ +
Sbjct: 306 SAASI 310
>gi|6753518|ref|NP_034081.1| insulin-like growth factor 2 mRNA-binding protein 1 [Mus musculus]
gi|81908461|sp|O88477.1|IF2B1_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1
gi|3273749|gb|AAC72743.1| coding region determinant binding protein [Mus musculus]
gi|12851514|dbj|BAB29071.1| unnamed protein product [Mus musculus]
gi|148684057|gb|EDL16004.1| insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 160/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
QP D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 389 SVTGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVVITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|355559801|gb|EHH16529.1| hypothetical protein EGK_11818, partial [Macaca mulatta]
Length = 542
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 173/419 (41%), Gaps = 63/419 (15%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 117 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 176
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 177 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 205
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 206 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 262
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 263 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 313
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + S G P Y P SG +S P Q G S
Sbjct: 314 LGIFSTGLSVLSPPAGPRGAPPAAPY--HPFATHSGYFSSLYPHHQFGPFPHHHSYPEQE 371
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 372 VVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 431
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ + + + + T + E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 432 QGRIFGKLKEEKFFTPK--EEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 488
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/176 (24%), Positives = 73/176 (41%), Gaps = 35/176 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P V + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 365 HSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 424
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE F E +
Sbjct: 425 PEAQFKAQGR-------------------------IFGKLKEEKFF------TPKEEVKL 453
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 454 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIG 506
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 106 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 161
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 162 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 218
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 219 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 274
Query: 541 EHLISA 546
E SA
Sbjct: 275 EACASA 280
>gi|356552330|ref|XP_003544521.1| PREDICTED: uncharacterized protein LOC100813135 [Glycine max]
Length = 670
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 91/194 (46%), Gaps = 32/194 (16%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
+I P+ ++G +IGK G +K L+ ++ AKI V D P S R + + SP IA
Sbjct: 125 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPDAIATA 184
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
+ ++ AE + II + G SD+ +P
Sbjct: 185 EKLINEVLAEAETGG---------------SGIIARRVAGQAGSDEYVSK--------IP 221
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
NN VG ++GK G+ I+ +++ TGA I+V+P LPP +T+ ++I G P + A
Sbjct: 222 NNKVGLVIGKGGETIKNMQASTGARIQVIPL-HLPPGDTSTERTLKIEGTPEQIESAKQM 280
Query: 308 VSTLL-----HQNP 316
V+ ++ H+NP
Sbjct: 281 VNQVISGENRHRNP 294
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 75/162 (46%), Gaps = 21/162 (12%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIRASAFEGLWN 455
S KI G++G +IGKGG +K LQ ++GA I V DA +S R +
Sbjct: 123 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPDAIA 182
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITTRLL-----------VPSSKVGCILGQGGHVINE 504
+ I+ +L +E G I R+ +P++KVG ++G+GG I
Sbjct: 183 TAEKLINEVL----AEAETGGSGIIARRVAGQAGSDEYVSKIPNNKVGLVIGKGGETIKN 238
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
M+ T A I+V+ + D S+E + I G+ E + SA
Sbjct: 239 MQASTGARIQVIPLHLPPGD---TSTERTLKIEGTPEQIESA 277
>gi|397470077|ref|XP_003806660.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Pan paniscus]
gi|179479906|gb|ACB86626.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 536
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 171/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 111 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 170
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 171 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 199
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 200 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 256
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 257 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 307
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + S G P Y P SG +S P Q G S
Sbjct: 308 LGIFSTGLSVLSPPAGPRGAPPAAPY--HPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQE 365
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 366 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 425
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 426 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 480
Query: 514 RV 515
V
Sbjct: 481 IV 482
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 359 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 418
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 419 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 447
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 448 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 504
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 505 SQTAQRKIREI 515
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 100 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 155
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 156 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 212
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 213 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 268
Query: 541 EHLISA 546
E SA
Sbjct: 269 EACASA 274
>gi|332215037|ref|XP_003256643.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 6 [Nomascus leucogenys]
Length = 542
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 171/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 117 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 176
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 177 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 205
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 206 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 262
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 263 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 313
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + S G P Y P SG +S P Q G S
Sbjct: 314 LGIFSTGLSVLSPPAGPRGAPPAAPY--HPFATHSGYFSSLYPHHQFGPFPHHHSYPEQE 371
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 372 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 431
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 432 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 486
Query: 514 RV 515
V
Sbjct: 487 IV 488
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 365 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 424
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 425 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 453
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 454 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 510
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 511 SQTAQRKIREI 521
Score = 43.1 bits (100), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 106 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 161
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 162 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 218
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 219 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 274
Query: 541 EHLISA 546
E SA
Sbjct: 275 EACASA 280
>gi|148665206|gb|EDK97622.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Mus musculus]
Length = 543
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 108/493 (21%), Positives = 191/493 (38%), Gaps = 102/493 (20%)
Query: 115 SREQSFG-----NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIP 168
+REQ G ++ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 120 AREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS 179
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
G+ E+ + I+++P E A +L++ +
Sbjct: 180 GAAEKPVTIHATP----------------------EGTSEACRMILEIMQK--------- 208
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+D+ + ++L N VG L+GK G ++++ ETG I + L N
Sbjct: 209 -EADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNP 265
Query: 289 DEMVQISGKPNVAKRALYEV---------STLLHQNPRKDKPPSSFPQAYG----GQNFH 335
+ + + G A E+ + +L N + + P A G G +
Sbjct: 266 ERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVL 325
Query: 336 SPPA------PMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPG 389
PPA P HP S SSL+ + P +
Sbjct: 326 PPPAGPRGVPPSPPYHPFATHS--GYFSSLYPHHHFGPFPHHHSYPEQE----------- 372
Query: 390 QMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRA 447
++ + +G +IGK G ++KQL + GASI + + P S+ VI
Sbjct: 373 ---------TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIIT 423
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINE 504
E + + + + K F E+ + + VPSS G ++G+GG +NE
Sbjct: 424 GPPEAQFKAQGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 478
Query: 505 MRRRTQADIRVVGARVKLQDPHPG-SSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQ 563
++ T A++ V +D P + E IV I G H ++ + Q +K Q
Sbjct: 479 LQNLTSAEVIVP------RDQTPDENEEVIVRIIG---HFFASQTAQRKIREIVQQVKQQ 529
Query: 564 PSSY-QNINPQQS 575
Y Q + PQ+S
Sbjct: 530 EQRYPQGVAPQRS 542
>gi|242093092|ref|XP_002437036.1| hypothetical protein SORBIDRAFT_10g019330 [Sorghum bicolor]
gi|241915259|gb|EER88403.1| hypothetical protein SORBIDRAFT_10g019330 [Sorghum bicolor]
Length = 319
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/173 (33%), Positives = 83/173 (47%), Gaps = 27/173 (15%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
+RILCP K G V +R+E+ A +TV G R+I +
Sbjct: 91 FRILCPECKAYGF---PPGFVAKVRDESGAFVTVHPPFAGDYVRIIETVDGARR------ 141
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIE--------EDLFGGMASDDDNENSTIT 241
A+ + P AQ+ALL VH RI+E + +G D + T T
Sbjct: 142 -----EADGRPPMFSP---AQEALLMVHRRILETDADDGDEDGEYGPRGKDPRDRGKT-T 192
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR-LPPCAMNTDEMVQ 293
RL+VP VGCLLGK G +I+++R ET +IR+LP D+ P C ++E+VQ
Sbjct: 193 TRLIVPKLHVGCLLGKGGKIIEQMRMETKTHIRILPRDQHTPRCVSLSEEVVQ 245
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 30/41 (73%)
Query: 476 EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
++G TTRL+VP VGC+LG+GG +I +MR T+ IR++
Sbjct: 187 DRGKTTTRLIVPKLHVGCLLGKGGKIIEQMRMETKTHIRIL 227
>gi|226528431|ref|NP_001149906.1| nucleic acid binding protein [Zea mays]
gi|195635381|gb|ACG37159.1| nucleic acid binding protein [Zea mays]
Length = 448
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 89/192 (46%), Gaps = 21/192 (10%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P D+V+R++ P K+G +IG+ G ++K L EET+A++ + + G+ ER++++
Sbjct: 43 PGDSVFRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLV------- 95
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
S E + P A DAL++V + + ARL
Sbjct: 96 ---------SGKEDPDLELPP---AMDALMRVFKXVTGITDGAAEXTQAAATPDVCAARL 143
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD--RLPPCAMNTDEMVQISGKPNVAK 302
LVP L+GK+G I+ ++ T A IRV+ D P + + +V+I G
Sbjct: 144 LVPGAQAINLIGKQGATIKAIQESTSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVL 203
Query: 303 RALYEVSTLLHQ 314
+AL VS L +
Sbjct: 204 KALQAVSNHLRK 215
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 11/158 (6%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ K+G +IG+ G +K+L +ET A + + + P + ER++ S E
Sbjct: 48 FRLVVPVLKVGSIIGRKGELIKRLVEETKARVRILEGPVGATERIVLVSGKEDPDLELPP 107
Query: 460 TIDAILQLQNKTSEFSEK-----------GTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+DA++++ + ++ RLLVP ++ ++G+ G I ++
Sbjct: 108 AMDALMRVFKXVTGITDGAAEXTQAAATPDVCAARLLVPGAQAINLIGKQGATIKAIQES 167
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
T A IRV+ + + E IV+I+G +E ++ A
Sbjct: 168 TSATIRVISVDEHERPFYVTDDERIVEIQGDTEKVLKA 205
>gi|166796167|gb|AAI59042.1| igf2bp3 protein [Xenopus (Silurana) tropicalis]
Length = 559
Score = 75.5 bits (184), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 85/391 (21%), Positives = 158/391 (40%), Gaps = 69/391 (17%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L P++ +G +IGK G ++++ ++TQ+KI + G+ E+ I I+S+P
Sbjct: 174 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTP-------- 225
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
E C K+ I++++ + D I ++L NN
Sbjct: 226 -----------EGCSAAC-------KIIMEIMQKE------AQDTKFTEEIPLKILAHNN 261
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VG L+GK G ++++ +T I + P L N + + + G +A E+
Sbjct: 262 FVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIEACAKAEEEIM 319
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMG 369
+ + S+ N + P +++ L G+ G
Sbjct: 320 KKIRE---------SYENDIAAMNLQAHLIPGLNLNAL-------------GLFPPSSSG 357
Query: 370 GYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGA 429
+ S PP G+ ++ + A +G +IGK G ++KQL + GA
Sbjct: 358 MPPPSVGVPSPTTSTSYPP--FGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGA 415
Query: 430 SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EKGTITTRL 484
SI + AP + + +R G P A ++ K E + E+ + +
Sbjct: 416 SIKI--APAEGPDAKLRMVIITG---PPEAQFKAQGRIYGKLKEENFFGPKEEVKLEAHI 470
Query: 485 LVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
VPS G ++G+GG +NE++ T A++ V
Sbjct: 471 KVPSYAAGRVIGKGGKTVNELQNLTSAEVVV 501
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 39/193 (20%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIY 178
FG ++TV+ + P+ +G +IGK G +K L A I +A P ++ R++II
Sbjct: 377 FGQQPESETVH-LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 435
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
P K Q +++ ++ EE+ FG E
Sbjct: 436 GPPEAQFKAQG-------------------------RIYGKLKEENFFG------PKEEV 464
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-- 296
+ A + VP+ G ++GK G + L++ T A + V+P D+ P N +V+I+G
Sbjct: 465 KLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 521
Query: 297 -KPNVAKRALYEV 308
+A+R + E+
Sbjct: 522 YASQLAQRKIQEI 534
>gi|432866565|ref|XP_004070866.1| PREDICTED: poly(rC)-binding protein 2-like [Oryzias latipes]
Length = 318
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/327 (23%), Positives = 139/327 (42%), Gaps = 69/327 (21%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ ER+I + T I K
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTSIFK--- 70
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
A + ++ +EED+ M + +T RL+VP +
Sbjct: 71 ----------------------AFSMIIEK-LEEDISNSMTNSTATSKPPVTMRLVVPAS 107
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R GA ++V D LP +T+ + ++G P + ++
Sbjct: 108 QCGSLIGKGGCKIKEIRESAGAQVQV-AGDMLPN---STERAITVAGTPQSIIECVKQIC 163
Query: 310 TLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLGNSSWPARN 356
++ ++P K +P PS P QAY Q H+ P P + +H L
Sbjct: 164 IVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDLTKLHQL--------- 214
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
M +P+ + +Q + G M + S ++ IG +IG+
Sbjct: 215 ----AMQQSPFPIAHSNQGFQAG-----------MDASAQTGSHELTIPNDLIGCIIGRQ 259
Query: 417 GFNVKQLQQETGASIHVEDAPTDSDER 443
G + +++Q +GA I + + S +R
Sbjct: 260 GAKINEIRQMSGAQIKIANPVEGSTDR 286
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S I+ + + + N T+ + K +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 TSIFKAFSMIIEKLEEDISNSMTNSTA--TSKPPVTMRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R A ++V G D P S+E + + G+ + +I
Sbjct: 124 RESAGAQVQVAG------DMLPNSTERAITVAGTPQSII 156
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 13/71 (18%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS
Sbjct: 244 ELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITGSHAS 296
Query: 540 ---SEHLISAH 547
+E+LI+A
Sbjct: 297 ISLAEYLINAR 307
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|348507477|ref|XP_003441282.1| PREDICTED: poly(rC)-binding protein 3-like [Oreochromis niloticus]
Length = 434
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 77/363 (21%), Positives = 145/363 (39%), Gaps = 64/363 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ GS I+ + PT
Sbjct: 19 LRLLMHGKEVGSIIGKKGETVKKMREESGARINISE---GSSPERIVTITGPT------- 68
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLV 246
+ + + I EED+ M + + +T RL+
Sbjct: 69 ---------------------EGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVF 107
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ V ISG P + +
Sbjct: 108 PGSQCGSLIGKGGSKIKEIRETTGAQVQVA-GDMLPD---STERAVTISGTPQAITQCVR 163
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTP 366
+ +++ ++P K P+ A +A H + P + + H
Sbjct: 164 HICSVMLESPPKGATIPYRPKVIPAGTH----AVLAPQHSAQAFAIPGQYAFAH------ 213
Query: 367 WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF----------SMKILCSAGKIGGVIGKG 416
+++ ++ P +G+ + F S ++ IG +IG+
Sbjct: 214 ------QDLTKLHQLAMQHIPLPSLGQSNPTFPGLDASAPTSSQELAIPNDFIGCIIGRQ 267
Query: 417 GFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSE 476
G + +++Q +GA I + A S R + + + I+A L++ T + +
Sbjct: 268 GSKINEIRQVSGAHIKIASATDGSAMRQVTITGSPASISVAQYLINASLEMAKYTMQAAS 327
Query: 477 KGT 479
T
Sbjct: 328 SAT 330
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 83/156 (53%), Gaps = 12/156 (7%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-F 450
G ++ ++++L ++G +IGK G VK++++E+GA I++ + S ER++ +
Sbjct: 11 GSLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--SSPERIVTITGPT 68
Query: 451 EGLWNPRS---QTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
EG++ S Q + + S + K +T RL+ P S+ G ++G+GG I E+R
Sbjct: 69 EGIFRAFSMIAQKFEEDITAAMTNSNVTSKPPVTLRLVFPGSQCGSLIGKGGSKIKEIRE 128
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
T A ++V G D P S+E V I G+ + +
Sbjct: 129 TTGAQVQVAG------DMLPDSTERAVTISGTPQAI 158
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 96/228 (42%), Gaps = 42/228 (18%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYSS 180
S+P T+ R++ P + G +IGK G+ +K +RE T A++ VA D +P S ER + I +
Sbjct: 96 TSKPPVTL-RLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDSTERAVTISGT 154
Query: 181 PTKIAKTQNKDDDSAAETKKES-----------------MEPHCAAQ------------D 211
P I + E+ + + P +AQ
Sbjct: 155 PQAITQCVRHICSVMLESPPKGATIPYRPKVIPAGTHAVLAPQHSAQAFAIPGQYAFAHQ 214
Query: 212 ALLKVHDRIIEEDLFGGMASDD------DNENSTITARLLVPNNMVGCLLGKRGDVIQRL 265
L K+H ++ + + D T + L +PN+ +GC++G++G I +
Sbjct: 215 DLTKLHQLAMQHIPLPSLGQSNPTFPGLDASAPTSSQELAIPNDFIGCIIGRQGSKINEI 274
Query: 266 RSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
R +GA+I++ A AM V I+G P A Y ++ L
Sbjct: 275 RQVSGAHIKI--ASATDGSAM---RQVTITGSPASISVAQYLINASLE 317
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
MASD + N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 7 MASDG-SLNVTLTLRLLMHGKEVGSIIGKKGETVKKMREESGARINI 52
>gi|145207996|ref|NP_898850.2| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
gi|81889459|sp|Q5SF07.1|IF2B2_MOUSE RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|46577878|gb|AAT01428.1| insulin-like growth factor 2 mRNA-binding protein 2 [Mus musculus]
Length = 592
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 108/493 (21%), Positives = 191/493 (38%), Gaps = 102/493 (20%)
Query: 115 SREQSFG-----NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIP 168
+REQ G ++ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 169 AREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS 228
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
G+ E+ + I+++P E A +L++ +
Sbjct: 229 GAAEKPVTIHATP----------------------EGTSEACRMILEIMQK--------- 257
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+D+ + ++L N VG L+GK G ++++ ETG I + L N
Sbjct: 258 -EADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNP 314
Query: 289 DEMVQISGKPNVAKRALYEV---------STLLHQNPRKDKPPSSFPQAYG----GQNFH 335
+ + + G A E+ + +L N + + P A G G +
Sbjct: 315 ERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVL 374
Query: 336 SPPA------PMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPG 389
PPA P HP S SSL+ + P +
Sbjct: 375 PPPAGPRGVPPSPPYHPFATHS--GYFSSLYPHHHFGPFPHHHSYPEQE----------- 421
Query: 390 QMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRA 447
++ + +G +IGK G ++KQL + GASI + + P S+ VI
Sbjct: 422 ---------TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIIT 472
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINE 504
E + + + + K F E+ + + VPSS G ++G+GG +NE
Sbjct: 473 GPPEAQFKAQGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 527
Query: 505 MRRRTQADIRVVGARVKLQDPHPG-SSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQ 563
++ T A++ V +D P + E IV I G H ++ + Q +K Q
Sbjct: 528 LQNLTSAEVIVP------RDQTPDENEEVIVRIIG---HFFASQTAQRKIREIVQQVKQQ 578
Query: 564 PSSY-QNINPQQS 575
Y Q + PQ+S
Sbjct: 579 EQRYPQGVAPQRS 591
>gi|332215029|ref|XP_003256639.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Nomascus leucogenys]
Length = 536
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 171/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 111 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 170
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 171 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 199
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 200 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 256
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 257 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 307
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + S G P Y P SG +S P Q G S
Sbjct: 308 LGIFSTGLSVLSPPAGPRGAPPAAPY--HPFATHSGYFSSLYPHHQFGPFPHHHSYPEQE 365
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 366 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 425
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 426 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 480
Query: 514 RV 515
V
Sbjct: 481 IV 482
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 359 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 418
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 419 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 447
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 448 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 504
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 505 SQTAQRKIREI 515
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 100 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 155
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 156 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 212
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 213 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 268
Query: 541 EHLISA 546
E SA
Sbjct: 269 EACASA 274
>gi|402860703|ref|XP_003894762.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Papio anubis]
Length = 536
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 171/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 111 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 170
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 171 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 199
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 200 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 256
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 257 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 307
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + S G P Y P SG +S P Q G S
Sbjct: 308 LGIFSTGLSVLSPPAGPRGAPPAAPY--HPFATHSGYFSSLYPHHQFGPFPHHHSYPEQE 365
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 366 VVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 425
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 426 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 480
Query: 514 RV 515
V
Sbjct: 481 IV 482
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P V + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 359 HSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 418
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 419 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 447
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 448 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 504
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 505 SQTAQRKIREI 515
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 100 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 155
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 156 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 212
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 213 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 268
Query: 541 EHLISA 546
E SA
Sbjct: 269 EACASA 274
>gi|296081618|emb|CBI20623.3| unnamed protein product [Vitis vinifera]
Length = 479
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 112/262 (42%), Gaps = 41/262 (15%)
Query: 70 LSHSRCIRFCCIMDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGN----SQP 125
L+ R + ++ N KRP + G G G+ SS G S P
Sbjct: 66 LAKQRAQEIAARLFSNASNTEAKRPRVE-NGAGAGGFDSGDKGFSSAPSDVGQKPMISTP 124
Query: 126 A---------DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEER 173
+ T +I P+ ++G +IGK G +K L+ ++ AKI V D P S R
Sbjct: 125 SAIPVSYGYQGTSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTR 184
Query: 174 VIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD 233
++ + +P +IAK + +D +E + I+ L G S+
Sbjct: 185 LVELMGTPDQIAKAEQLINDVLSEAEAGG---------------SGIVSRRLTGQAGSEQ 229
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
+ VPNN VG ++GK G+ I+ +++ TGA I+V+P LPP + + VQ
Sbjct: 230 --------FVMKVPNNKVGLIIGKGGETIKNMQARTGARIQVIPL-HLPPGDTSMERTVQ 280
Query: 294 ISGKPNVAKRALYEVSTLLHQN 315
I G + A V+ ++ +N
Sbjct: 281 IDGTSEQIESAKQLVNEVISEN 302
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 78/162 (48%), Gaps = 21/162 (12%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIRASAFEGLWN 455
S KI G++G +IGKGG +K LQ ++GA I V DA +S R++
Sbjct: 137 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQIA 196
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITTRLL-----------VPSSKVGCILGQGGHVINE 504
Q I+ +L +E G ++ RL VP++KVG I+G+GG I
Sbjct: 197 KAEQLINDVL----SEAEAGGSGIVSRRLTGQAGSEQFVMKVPNNKVGLIIGKGGETIKN 252
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
M+ RT A I+V+ + D S E V I G+SE + SA
Sbjct: 253 MQARTGARIQVIPLHLPPGD---TSMERTVQIDGTSEQIESA 291
>gi|30354044|gb|AAH51679.1| Insulin-like growth factor 2 mRNA binding protein 1 [Mus musculus]
Length = 577
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 160/398 (40%), Gaps = 72/398 (18%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPT 182
QP D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S+P
Sbjct: 192 QPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTP- 250
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
E +A +L++ + + D +
Sbjct: 251 ---------------------EGCSSACKMILEIMHK----------EAKDTKTADGVPL 279
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIENCC 337
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
RA E+ + + D S Q+ P +A + SS
Sbjct: 338 RAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPSSVT 391
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+ P+ S P +M +++ A +G +IGK G ++KQ
Sbjct: 392 GAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQHIKQ 430
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EK 477
L + ASI + AP ++ + +R G P A ++ K E + E+
Sbjct: 431 LSRFASASIKI--APPETPDSKVRMVVITG---PPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 486 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|148665204|gb|EDK97620.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Mus musculus]
Length = 596
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 108/493 (21%), Positives = 191/493 (38%), Gaps = 102/493 (20%)
Query: 115 SREQSFG-----NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIP 168
+REQ G ++ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 173 AREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS 232
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
G+ E+ + I+++P E A +L++ +
Sbjct: 233 GAAEKPVTIHATP----------------------EGTSEACRMILEIMQK--------- 261
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+D+ + ++L N VG L+GK G ++++ ETG I + L N
Sbjct: 262 -EADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNP 318
Query: 289 DEMVQISGKPNVAKRALYEV---------STLLHQNPRKDKPPSSFPQAYG----GQNFH 335
+ + + G A E+ + +L N + + P A G G +
Sbjct: 319 ERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVL 378
Query: 336 SPPA------PMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPG 389
PPA P HP S SSL+ + P +
Sbjct: 379 PPPAGPRGVPPSPPYHPFATHS--GYFSSLYPHHHFGPFPHHHSYPEQE----------- 425
Query: 390 QMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRA 447
++ + +G +IGK G ++KQL + GASI + + P S+ VI
Sbjct: 426 ---------TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIIT 476
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINE 504
E + + + + K F E+ + + VPSS G ++G+GG +NE
Sbjct: 477 GPPEAQFKAQGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 531
Query: 505 MRRRTQADIRVVGARVKLQDPHPG-SSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQ 563
++ T A++ V +D P + E IV I G H ++ + Q +K Q
Sbjct: 532 LQNLTSAEVIVP------RDQTPDENEEVIVRIIG---HFFASQTAQRKIREIVQQVKQQ 582
Query: 564 PSSY-QNINPQQS 575
Y Q + PQ+S
Sbjct: 583 EQRYPQGVAPQRS 595
>gi|348582424|ref|XP_003476976.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
[Cavia porcellus]
Length = 532
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 104/447 (23%), Positives = 175/447 (39%), Gaps = 105/447 (23%)
Query: 105 GIKKGNWSNSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQA 159
G ++G+ +SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+
Sbjct: 101 GAQRGD--HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQS 158
Query: 160 KITV-ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHD 218
++ + G+ E+ + I+++P E C
Sbjct: 159 RVDIHRKENSGAAEKPVTIHATP-------------------EGTSEAC----------- 188
Query: 219 RIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA 278
R+I E + +D+ I ++L N +VG L+GK G ++++ ETG I +
Sbjct: 189 RMILEIM--QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSL 246
Query: 279 DRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPP 338
L N + + + G A E+ L + D
Sbjct: 247 QDL--SIYNPERTITVKGAVEACASAEVEIMKKLREAFEND------------------- 285
Query: 339 APMADMHPLGNSSWPARNSSLHGMPST------------------PWMGGYGDQPSRMGS 380
M +H N P N S G+ ST P+ P S
Sbjct: 286 --MLAVHQQANL-IPGLNLSALGIFSTGLSVLPPPAGPRGAPPTAPY------HPFATHS 336
Query: 381 GSINSC-PPGQMGEVSAEFS------MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
G +S P Q G S + + +G +IGK G ++KQL + GASI +
Sbjct: 337 GYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKI 396
Query: 434 E--DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPS 488
+ P S+ VI E + + + + K F E+ + + VPS
Sbjct: 397 APAEGPDVSERMVIITGPPEAQFKAQGRIFGKL-----KEENFFNPKEEVKLEAHIRVPS 451
Query: 489 SKVGCILGQGGHVINEMRRRTQADIRV 515
S G ++G+GG +NE++ T A++ V
Sbjct: 452 STAGRVIGKGGKTVNELQNLTSAEVIV 478
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 355 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 414
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 415 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 443
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 444 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 500
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 501 SQTAQRKIREI 511
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 82/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
P P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 96 PPPPQGAQRGDHSSR----EQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 151
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 152 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 208
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 209 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGAV 264
Query: 541 EHLISA 546
E SA
Sbjct: 265 EACASA 270
>gi|448081084|ref|XP_004194801.1| Piso0_005318 [Millerozyma farinosa CBS 7064]
gi|359376223|emb|CCE86805.1| Piso0_005318 [Millerozyma farinosa CBS 7064]
Length = 492
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 88/390 (22%), Positives = 155/390 (39%), Gaps = 88/390 (22%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPT 182
S P +R+ CP ++ ++GK G + +R++ +I V++ + ER+I +
Sbjct: 123 SDPTYVSFRMYCPVKEASTIVGKKGEKINHIRDKANVRINVSENLKNVPERIISVRGPAE 182
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
+AK A + I+EE ++E ++I +
Sbjct: 183 NVAK-------------------------AFGLIARTILEEP---------EDEPASILS 208
Query: 243 R-----LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
R LLVP+ MVG ++GK+G + + + A ++ P +TD ++ I+G
Sbjct: 209 RQYNLKLLVPHPMVGFIIGKQGVKFREIEDSSAAKLKAAEQ----PLPYSTDRILSITGV 264
Query: 298 PNVAKRALYEVSTLL--HQNPRKDKPPSSFPQAYG---------------GQNFHSPPAP 340
+ A+Y +S ++ H++ K + A N + A
Sbjct: 265 GDAIHIAIYYISQVMIEHKDCLKKNKVVYYNPANYHHNNMNMMNVSMMQPNTNMYMGTAN 324
Query: 341 MADMHPLGNSSWPARNS-------------SLH------GMPSTPW----MGGYGDQPSR 377
M L + S P + S+H PS+P Y D+
Sbjct: 325 ALTMQALKDVSNPYAHQVKQPYNFQMMFQPSVHPQHQFSASPSSPMAMPAQTQYTDEHGN 384
Query: 378 MGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP 437
G + PP Q+G + +F + + IG VIGKGG N+KQ+++ +G + +V+ P
Sbjct: 385 NVIGDVIVQPPVQVGGKTDKFYQDVFVANANIGSVIGKGGHNIKQIRENSGCT-YVKIEP 443
Query: 438 TDSDER-VIRASAFEGLWNPRSQTIDAILQ 466
D+R I GL N R T+ LQ
Sbjct: 444 ---DQRQSIMLGGGRGLTNIRKLTLTGSLQ 470
>gi|28212254|ref|NP_783184.1| insulin-like growth factor 2 mRNA-binding protein 1 [Rattus
norvegicus]
gi|81866340|sp|Q8CGX0.1|IF2B1_RAT RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=B-actin zipcode-binding protein 1; Short=rZBP-1;
AltName: Full=IGF-II mRNA-binding protein 1; AltName:
Full=VICKZ family member 1
gi|27464838|gb|AAO16210.1| b-actin zipcode binding protein 1 [Rattus norvegicus]
gi|149053959|gb|EDM05776.1| insulin-like growth factor 2, binding protein 1 [Rattus norvegicus]
gi|171846741|gb|AAI61831.1| Insulin-like growth factor 2 mRNA binding protein 1 [Rattus
norvegicus]
Length = 577
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 160/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ GS P +M +++ A +G +IGK G +
Sbjct: 389 SVTGAAPY-------------GSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVVITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|148665207|gb|EDK97623.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_d
[Mus musculus]
Length = 603
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 109/493 (22%), Positives = 191/493 (38%), Gaps = 102/493 (20%)
Query: 115 SREQSFG-----NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIP 168
+REQ G ++ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 180 AREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS 239
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
G+ E+ + I+++P E A +L++ +
Sbjct: 240 GAAEKPVTIHATP----------------------EGTSEACRMILEIMQK--------- 268
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+D+ + ++L N VG L+GK G ++++ ETG I + L N
Sbjct: 269 -EADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNP 325
Query: 289 DEMVQISGKPNVAKRALYEV---------STLLHQNPRKDKPPSSFPQAYG----GQNFH 335
+ + + G A E+ + +L N + + P A G G +
Sbjct: 326 ERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVL 385
Query: 336 SPPA------PMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPG 389
PPA P HP S SSL+ + P +
Sbjct: 386 PPPAGPRGVPPSPPYHPFATHS--GYFSSLYPHHHFGPFPHHHSYPEQE----------- 432
Query: 390 QMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA--PTDSDERVIRA 447
++ + +G +IGK G ++KQL + GASI + A P S+ VI
Sbjct: 433 ---------TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIIT 483
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINE 504
E + + + + K F E+ + + VPSS G ++G+GG +NE
Sbjct: 484 GPPEAQFKAQGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 538
Query: 505 MRRRTQADIRVVGARVKLQDPHPG-SSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQ 563
++ T A++ V +D P + E IV I G H ++ + Q +K Q
Sbjct: 539 LQNLTSAEVIVP------RDQTPDENEEVIVRIIG---HFFASQTAQRKIREIVQQVKQQ 589
Query: 564 PSSY-QNINPQQS 575
Y Q + PQ+S
Sbjct: 590 EQRYPQGVAPQRS 602
>gi|67536752|ref|XP_662150.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|40741699|gb|EAA60889.1| hypothetical protein AN4546.2 [Aspergillus nidulans FGSC A4]
gi|259482624|tpe|CBF77283.1| TPA: KH domain RNA-binding protein (AFU_orthologue; AFUA_2G02780)
[Aspergillus nidulans FGSC A4]
Length = 542
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 78/312 (25%), Positives = 144/312 (46%), Gaps = 41/312 (13%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ +PG +RV+ + + + A+
Sbjct: 230 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGALSGTAR---- 285
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ A K +E A Q + GG+ S+ N T RLL+ +N
Sbjct: 286 ---AYALVAKGLLE--GAPQMGM-------------GGIVSN----NGTHPIRLLISHNQ 323
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 324 MGTIIGRQGLKIKHIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAIWEIGK 379
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNS-SWPAR--NSSLHGMPSTPW 367
L + ++ + A S + H GNS S+ +R N + +G +
Sbjct: 380 CLIDDWQRGTGTILYNPA-----VRSSVGSGSIQHNGGNSDSYNSRPYNRTGNGADFSDQ 434
Query: 368 MGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQET 427
GGYG R + N P + + I A +G +IG+GG + ++++ +
Sbjct: 435 SGGYG---RRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGTKITEIRRSS 491
Query: 428 GASIHVEDAPTD 439
GA I + AP D
Sbjct: 492 GARISIAKAPHD 503
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 77/170 (45%), Gaps = 10/170 (5%)
Query: 381 GSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS 440
G + P + + +++ + S+ + G +IGK G NV L+ ETG V
Sbjct: 210 GDLEVAPKTEEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGV 269
Query: 441 DERVIRAS-AFEGLWNPRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILG 496
+RV+ + A G + +L+ S GT RLL+ +++G I+G
Sbjct: 270 HDRVLTVTGALSGTARAYALVAKGLLEGAPQMGMGGIVSNNGTHPIRLLISHNQMGTIIG 329
Query: 497 QGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
+ G I + + + +R+V + L P S+E IV+++G+ E + A
Sbjct: 330 RQGLKIKHI--QDASGVRMVAQKEML----PQSTERIVEVQGTPEGIEKA 373
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P +MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 463 TQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAKA----PHDETGERMFTIMGSAQA 518
Query: 301 AKRALYEVSTLLHQNPRKDK 320
++ALY LL++N +K
Sbjct: 519 NEKALY----LLYENLEAEK 534
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +P+ VGCI+G+GG I E+RR + A I + A PH + E + I GS+
Sbjct: 463 TQNISIPADMVGCIIGRGGTKITEIRRSSGARISIAKA------PHDETGERMFTIMGSA 516
Query: 541 E 541
+
Sbjct: 517 Q 517
>gi|291400299|ref|XP_002716509.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 1 [Oryctolagus cuniculus]
Length = 599
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 100/426 (23%), Positives = 171/426 (40%), Gaps = 77/426 (18%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 320 NPERTITVKGTVEACASAEAEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 370
Query: 347 LGN-----SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS- 399
LG S P P+ P+ P SG +S P Q G S
Sbjct: 371 LGIFSTGLSMLPPPAGPRGAPPTAPY------HPFATHSGYFSSLYPHHQFGPFPHHHSY 424
Query: 400 -----MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEG 452
+ + +G +IGK G ++KQL + GASI + + P S+ VI E
Sbjct: 425 PEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEA 484
Query: 453 LWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
+ + + + K F E+ + + VPSS G ++G+GG +NE++ T
Sbjct: 485 QFKAQGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLT 539
Query: 510 QADIRV 515
A++ V
Sbjct: 540 SAEVIV 545
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 422 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 481
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 482 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 510
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 511 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 567
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 568 SQTAQRKIREI 578
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 13/188 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 163 PSPPQRAQRGDHSSR----EQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 218
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 219 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 275
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 276 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 331
Query: 541 EHLISAHG 548
E SA
Sbjct: 332 EACASAEA 339
>gi|444519891|gb|ELV12903.1| Poly(rC)-binding protein 3 [Tupaia chinensis]
Length = 300
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 114/246 (46%), Gaps = 33/246 (13%)
Query: 211 DALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRS 267
DA+ K I EED+ M++ +T RL+VP + G L+GK G I+ +R
Sbjct: 47 DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRE 106
Query: 268 ETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKD-----KP- 321
TGA ++V D LP +T+ V ISG P+ + + ++ ++ ++P K +P
Sbjct: 107 STGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPK 162
Query: 322 PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH--GMPSTPWMGGYGDQPSRMG 379
P+S P + G ++ A H P + + LH M TP+ P+ G
Sbjct: 163 PASTPVIFAGGQAYTIQGQYAIPH-------PDQLTKLHQLAMQQTPFPPLGQTNPAFPG 215
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
+++ PP E++ + IG +IG+ G + +++Q +GA I + +A
Sbjct: 216 ---LDASPPASTHELTIPNDL--------IGCIIGRQGTKINEIRQMSGAQIKIANATEG 264
Query: 440 SDERVI 445
S ER I
Sbjct: 265 SSERQI 270
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/250 (23%), Positives = 106/250 (42%), Gaps = 44/250 (17%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 50 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 108
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 109 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 168
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD------DNENSTITA 242
A + + PH D L K+H +++ F + + D T
Sbjct: 169 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGLDASPPASTH 225
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
L +PN+++GC++G++G I +R +GA I++ A +++ + I+G P
Sbjct: 226 ELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-----GSSERQITITGTPANIS 280
Query: 303 RALYEVSTLL 312
A Y ++ L
Sbjct: 281 LAQYLINARL 290
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 67/147 (45%), Gaps = 29/147 (19%)
Query: 413 IGKGGFNVKQ-----LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
+ +GG NV + ++GA I++ + + ER++ + P A +
Sbjct: 5 VSEGGLNVTLTIRLLMHGKSGARINISEG--NCPERIVT------ITGPTDAIFKAFAMI 56
Query: 468 QNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
K E + K +T RL+VP+S+ G ++G+GG I E+R T A ++V G
Sbjct: 57 AYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG 116
Query: 518 ARVKLQDPHPGSSECIVDIRGSSEHLI 544
D P S+E V I G+ + +I
Sbjct: 117 ------DMLPNSTERAVTISGTPDAII 137
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 224 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 276
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 277 ANISLAQYLINARLTS 292
>gi|326500580|dbj|BAK06379.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 471
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 89/190 (46%), Gaps = 19/190 (10%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +V+R++ K+GG+IG+ G ++K L E T+A++ V D G R+++I
Sbjct: 91 PGASVFRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLDPTDGVSSRIVLI------- 143
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
SA E + + P A DA +++ + + + + + +ARL
Sbjct: 144 ---------SATEETQAELAP---AMDAAVRIFKHVNDIEGINPDFTLPVSGPEICSARL 191
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
LVP L+GK+G IQ ++ TG IR++ D L M + +V+I G A
Sbjct: 192 LVPKAQGRHLIGKQGTTIQLMQESTGTTIRIIDKDELLSNQMVEERIVEIRGASLKVLNA 251
Query: 305 LYEVSTLLHQ 314
L V LL +
Sbjct: 252 LKSVLGLLRR 261
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 78/159 (49%), Gaps = 15/159 (9%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS-DERVIRASAFEGLWNPRS 458
+++ + K+GG+IG+ G +K+L + T A + V D PTD R++ SA E +
Sbjct: 96 FRLVVAGDKVGGLIGRRGEVIKRLCEVTRARVRVLD-PTDGVSSRIVLISATEETQAELA 154
Query: 459 QTIDAILQLQNKTSEF-----------SEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+DA +++ ++ S + RLLVP ++ ++G+ G I M+
Sbjct: 155 PAMDAAVRIFKHVNDIEGINPDFTLPVSGPEICSARLLVPKAQGRHLIGKQGTTIQLMQE 214
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
T IR++ L + E IV+IRG+S +++A
Sbjct: 215 STGTTIRIIDKDELLSNQM--VEERIVEIRGASLKVLNA 251
>gi|332818640|ref|XP_001151234.2| PREDICTED: LOW QUALITY PROTEIN: insulin-like growth factor 2 mRNA
binding protein 2 isoform 7 [Pan troglodytes]
Length = 599
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 171/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 320 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 370
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + S G P Y P SG +S P Q G S
Sbjct: 371 LGIFSTGLSVLSPPAGPRGAPPAAPY--HPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQE 428
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 429 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 488
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 489 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 543
Query: 514 RV 515
V
Sbjct: 544 IV 545
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 422 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 481
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 482 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 510
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 511 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 567
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 568 SQTAQRKIREI 578
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 163 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 218
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 219 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 275
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 276 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 331
Query: 541 EHLISA 546
E SA
Sbjct: 332 EACASA 337
>gi|64085377|ref|NP_006539.3| insulin-like growth factor 2 mRNA-binding protein 2 isoform a [Homo
sapiens]
gi|224471831|sp|Q9Y6M1.2|IF2B2_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=Hepatocellular carcinoma autoantigen p62; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|119598617|gb|EAW78211.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_c
[Homo sapiens]
gi|158254760|dbj|BAF83353.1| unnamed protein product [Homo sapiens]
gi|410223074|gb|JAA08756.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251296|gb|JAA13615.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302886|gb|JAA30043.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342487|gb|JAA40190.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 599
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 171/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 320 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 370
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + S G P Y P SG +S P Q G S
Sbjct: 371 LGIFSTGLSVLSPPAGPRGAPPAAPY--HPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQE 428
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 429 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 488
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 489 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 543
Query: 514 RV 515
V
Sbjct: 544 IV 545
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 422 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 481
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 482 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 510
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 511 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 567
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 568 SQTAQRKIREI 578
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 163 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 218
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 219 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 275
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 276 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 331
Query: 541 EHLISA 546
E SA
Sbjct: 332 EACASA 337
>gi|414867455|tpg|DAA46012.1| TPA: hypothetical protein ZEAMMB73_887859 [Zea mays]
Length = 455
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 34/164 (20%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD-SDERVIRASAFEGLWNPR 457
S++ILC++ IG VIGK G NV++++Q+TGA I V++ D S ER+I S+ E P
Sbjct: 213 SIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPI 272
Query: 458 SQTIDAILQLQNKT-----------------SEFSEKGTITTRLLVPSSKVGCILGQGGH 500
S TI+A++ L +K SE G + R+L S +G ++G+ G
Sbjct: 273 SPTIEALILLHDKVLMAEVKRNHGGGMRCDELPVSENGDKSIRILCASELIGSVIGKSGA 332
Query: 501 VINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
+ + ++T GAR+K+Q+ +D S E LI
Sbjct: 333 NVRRVEQQT-------GARIKVQE---------IDKDASGERLI 360
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 128/282 (45%), Gaps = 51/282 (18%)
Query: 80 CIMDASKRNFFKKR----PNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCP 135
C+ + F K+ P R + +K+ N R S+ D RILC
Sbjct: 161 CVSSSRDLVFSVKKMDATPQCHMARVLMAEVKR-NHGGGMRCDELPVSENGDKSIRILCA 219
Query: 136 SRKIGGVIGKAGNIVKSLREETQAKITVADT-IPGSEERVIIIYSSPTKIAKTQNKDDDS 194
S IG VIGK+G V+ + ++T A+I V + S ER+II+ S+
Sbjct: 220 SELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSN-------------- 265
Query: 195 AAETKKESMEPHCAAQDALLKVHDRIIEEDLF----GGMASDD--DNENSTITARLLVPN 248
E E + P +AL+ +HD+++ ++ GGM D+ +EN + R+L +
Sbjct: 266 --EIPTEPISP---TIEALILLHDKVLMAEVKRNHGGGMRCDELPVSENGDKSIRILCAS 320
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADR--------------LP--PCAMNTDEMV 292
++G ++GK G ++R+ +TGA I+V D+ +P P + + ++
Sbjct: 321 ELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPISPTIEALI 380
Query: 293 ----QISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYG 330
+++G P +A+ AL E+++ L +D ++ P +
Sbjct: 381 LLHDKVAGPPAIARGALTEIASRLRTRTLRDTSTANNPPPFA 422
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 51/75 (68%), Gaps = 1/75 (1%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD-SDERVIRASAFEGLWNPR 457
S++ILC++ IG VIGK G NV++++Q+TGA I V++ D S ER+I S+ E P
Sbjct: 313 SIRILCASELIGSVIGKSGANVRRVEQQTGARIKVQEIDKDASGERLIIVSSNEIPTEPI 372
Query: 458 SQTIDAILQLQNKTS 472
S TI+A++ L +K +
Sbjct: 373 SPTIEALILLHDKVA 387
>gi|156372967|ref|XP_001629306.1| predicted protein [Nematostella vectensis]
gi|156216303|gb|EDO37243.1| predicted protein [Nematostella vectensis]
Length = 419
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 84/146 (57%), Gaps = 16/146 (10%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRS 458
+++IL + GG+IGKGG N+++L+ E A ++V D T+S+ERV+ +A PR
Sbjct: 54 TLRILIQSKDAGGIIGKGGTNIRRLRTEYNAVVNVPD--TNSNERVLTITA------PRQ 105
Query: 459 QTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGA 518
+D + ++ K E I ++LV S+VG I+G+ G+ I E+R + A+++V
Sbjct: 106 SALDILAEVVPKIGEVQYGHEI--QMLVQRSQVGSIIGRAGYKIKEIREGSGANVKV--- 160
Query: 519 RVKLQDPHPGSSECIVDIRGSSEHLI 544
D P S+E +V + GS+E ++
Sbjct: 161 ---FADCLPNSTERVVTMSGSAETIV 183
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 83/193 (43%), Gaps = 44/193 (22%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A T RIL S+ GG+IGK G ++ LR E A + V DT S ERV+ I +
Sbjct: 51 APTTLRILIQSKDAGGIIGKGGTNIRRLRTEYNAVVNVPDT--NSNERVLTITA------ 102
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
P +A D L +V +I E +G ++L
Sbjct: 103 -------------------PRQSALDILAEVVPKIGEVQ-YGH------------EIQML 130
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
V + VG ++G+ G I+ +R +GAN++V AD LP T+ +V +SG + +
Sbjct: 131 VQRSQVGSIIGRAGYKIKEIREGSGANVKVF-ADCLPNS---TERVVTMSGSAETIVKCV 186
Query: 306 YEVSTLLHQNPRK 318
V + P K
Sbjct: 187 ENVLVAIANAPLK 199
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 1/80 (1%)
Query: 110 NWSNSSREQSFGNSQPAD-TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
N N S GN+ D T ++ P G +IGK G +K +R A I + D +P
Sbjct: 325 NQWNQGGASSGGNTAGGDQTSTQVTIPKDLAGSIIGKGGERIKMIRNRCNAVIKIDDPLP 384
Query: 169 GSEERVIIIYSSPTKIAKTQ 188
GS +R+I I + +I Q
Sbjct: 385 GSNDRIITITGNQEQINHAQ 404
>gi|426217762|ref|XP_004003121.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Ovis aries]
Length = 556
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 95/420 (22%), Positives = 161/420 (38%), Gaps = 108/420 (25%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N HS
Sbjct: 320 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAANTHS---------- 360
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFS------M 400
GY + CPP Q G S +
Sbjct: 361 -----------------------GYFS----------SLCPPHQFGPFPHHHSYPEQEIV 387
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRS 458
+ +G +IGK G ++KQL + GASI + + P S+ VI E + +
Sbjct: 388 NLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQG 447
Query: 459 QTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ + K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 448 RIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 502
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 379 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 438
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 439 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 467
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 468 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 524
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 525 SQTAQRKIREI 535
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 163 PSPPQRAQRGDHSSR----EQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 218
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 219 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT-SEACRMILEIMQKEADETKLAEE--I 275
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 276 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 331
Query: 541 EHLISA 546
E SA
Sbjct: 332 EACASA 337
>gi|395532668|ref|XP_003768391.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Sarcophilus harrisii]
Length = 577
Score = 74.7 bits (182), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 160/398 (40%), Gaps = 72/398 (18%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPT 182
QP D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S+P
Sbjct: 192 QPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTP- 250
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
E +A +L++ + + D +
Sbjct: 251 ---------------------EGCSSACKMILEIMQK----------EAKDTKTADEVPL 279
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGSIENCC 337
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
+A E+ + + D S Q+ P +A + SS
Sbjct: 338 KAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPSSVS 391
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+ P+ S P +M +++ A +G +IGK G ++KQ
Sbjct: 392 GAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQHIKQ 430
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EK 477
L + ASI + AP ++ + +R G P A ++ K E + E+
Sbjct: 431 LSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 486 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|449270977|gb|EMC81613.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Columba livia]
Length = 584
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 162/401 (40%), Gaps = 79/401 (19%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKI 184
+D R+L P++ +G +IGK G ++++ ++TQ+KI + G+ E+ I I+S+P
Sbjct: 195 SDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTP--- 251
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
E C K+ I++++ + D I ++
Sbjct: 252 ----------------EGCSTAC-------KIIMEIMQKE------AQDTKFTEEIPLKI 282
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L NN VG L+GK G ++++ +T I + P L N + + + G +A
Sbjct: 283 LAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIETCAKA 340
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG-----NSSWPARNSSL 359
E+ + + S+ N + P +++ LG +S P S+
Sbjct: 341 EEEIMKKIRE---------SYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSV 391
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ +G QP ++ + A +G +IGK G +
Sbjct: 392 ASAAAAASYPPFGQQPESE--------------------TVHLFIPALAVGAIIGKQGQH 431
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + GASI + AP + + +R G P A ++ K E +
Sbjct: 432 IKQLSRFAGASIKI--APAEGPDAKLRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 486
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + + VPS G ++G+GG +NE++ T A++ V
Sbjct: 487 KEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVV 527
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 39/193 (20%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIY 178
FG ++TV+ + P+ +G +IGK G +K L A I +A P ++ R++II
Sbjct: 403 FGQQPESETVH-LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 461
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
P K Q +++ ++ EE+ FG E
Sbjct: 462 GPPEAQFKAQG-------------------------RIYGKLKEENFFG------PKEEV 490
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-- 296
+ A + VP+ G ++GK G + L++ T A + V+P D+ P N +V+I+G
Sbjct: 491 KLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 547
Query: 297 -KPNVAKRALYEV 308
+A+R + E+
Sbjct: 548 YACQLAQRKIQEI 560
>gi|57530702|ref|NP_001006359.1| insulin-like growth factor 2 mRNA-binding protein 3 [Gallus gallus]
gi|82082638|sp|Q5ZLP8.1|IF2B3_CHICK RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 3;
Short=IGF2 mRNA-binding protein 3; Short=IMP-3; AltName:
Full=IGF-II mRNA-binding protein 3; AltName: Full=VICKZ
family member 3
gi|53128909|emb|CAG31345.1| hypothetical protein RCJMB04_5e15 [Gallus gallus]
Length = 584
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 162/401 (40%), Gaps = 79/401 (19%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKI 184
+D R+L P++ +G +IGK G ++++ ++TQ+KI + G+ E+ I I+S+P
Sbjct: 195 SDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTP--- 251
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
E C K+ I++++ + D I ++
Sbjct: 252 ----------------EGCSTAC-------KIIMEIMQKE------AQDTKFTEEIPLKI 282
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L NN VG L+GK G ++++ +T I + P L N + + + G +A
Sbjct: 283 LAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIETCAKA 340
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG-----NSSWPARNSSL 359
E+ + + S+ N + P +++ LG +S P S+
Sbjct: 341 EEEIMKKIRE---------SYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSV 391
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ +G QP ++ + A +G +IGK G +
Sbjct: 392 ASAAAAASYPPFGQQPESE--------------------TVHLFIPALAVGAIIGKQGQH 431
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + GASI + AP + + +R G P A ++ K E +
Sbjct: 432 IKQLSRFAGASIKI--APAEGPDAKLRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 486
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + + VPS G ++G+GG +NE++ T A++ V
Sbjct: 487 KEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVV 527
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 39/193 (20%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIY 178
FG ++TV+ + P+ +G +IGK G +K L A I +A P ++ R++II
Sbjct: 403 FGQQPESETVH-LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 461
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
P K Q +++ ++ EE+ FG E
Sbjct: 462 GPPEAQFKAQG-------------------------RIYGKLKEENFFG------PKEEV 490
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-- 296
+ A + VP+ G ++GK G + L++ T A + V+P D+ P N +V+I+G
Sbjct: 491 KLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 547
Query: 297 -KPNVAKRALYEV 308
+A+R + E+
Sbjct: 548 YACQLAQRKIQEI 560
>gi|332215027|ref|XP_003256638.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Nomascus leucogenys]
Length = 599
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 171/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 320 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 370
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + S G P Y P SG +S P Q G S
Sbjct: 371 LGIFSTGLSVLSPPAGPRGAPPAAPY--HPFATHSGYFSSLYPHHQFGPFPHHHSYPEQE 428
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 429 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 488
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 489 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 543
Query: 514 RV 515
V
Sbjct: 544 IV 545
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 422 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 481
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 482 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 510
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 511 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 567
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 568 SQTAQRKIREI 578
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 163 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 218
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 219 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 275
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 276 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 331
Query: 541 EHLISA 546
E SA
Sbjct: 332 EACASA 337
>gi|4191610|gb|AAD09827.1| IGF-II mRNA-binding protein 2 [Homo sapiens]
gi|18204201|gb|AAH21290.1| Insulin-like growth factor 2 mRNA binding protein 2 [Homo sapiens]
gi|123982692|gb|ABM83087.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
gi|157928388|gb|ABW03490.1| insulin-like growth factor 2 mRNA binding protein 2 [synthetic
construct]
Length = 598
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 171/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 173 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 232
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 233 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 261
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 262 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 318
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 319 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 369
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + S G P Y P SG +S P Q G S
Sbjct: 370 LGIFSTGLSVLSPPAGPRGAPPAAPY--HPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQE 427
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 428 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 487
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 488 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 542
Query: 514 RV 515
V
Sbjct: 543 IV 544
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 421 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 480
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 481 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 509
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 510 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 566
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 567 SQTAQRKIREI 577
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 162 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 217
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 218 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 274
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 275 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 330
Query: 541 EHLISA 546
E SA
Sbjct: 331 EACASA 336
>gi|109042328|ref|XP_001095336.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 5 [Macaca mulatta]
gi|402860699|ref|XP_003894760.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 1 [Papio anubis]
Length = 599
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 171/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 320 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 370
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + S G P Y P SG +S P Q G S
Sbjct: 371 LGIFSTGLSVLSPPAGPRGAPPAAPY--HPFATHSGYFSSLYPHHQFGPFPHHHSYPEQE 428
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 429 VVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 488
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 489 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 543
Query: 514 RV 515
V
Sbjct: 544 IV 545
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P V + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 422 HSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 481
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 482 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 510
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 511 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 567
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 568 SQTAQRKIREI 578
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 163 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 218
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 219 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 275
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 276 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 331
Query: 541 EHLISA 546
E SA
Sbjct: 332 EACASA 337
>gi|431838851|gb|ELK00780.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Pteropus
alecto]
Length = 820
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 97/421 (23%), Positives = 167/421 (39%), Gaps = 67/421 (15%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 395 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 454
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 455 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 483
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 484 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 540
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 541 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 591
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS------ 399
LG S + P SG +S PP Q S
Sbjct: 592 LGIFS-TGLSVLPPPAGPRGAPPAPPYHPFATHSGYFSSLYPPHQFSPFPHHHSYPEQEI 650
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPR 457
+ + +G +IGK G ++KQL + GASI + + P S+ VI E + +
Sbjct: 651 VNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQ 710
Query: 458 SQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 711 GRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVI 765
Query: 515 V 515
V
Sbjct: 766 V 766
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 643 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 702
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 703 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 731
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK--- 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 732 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 788
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 789 SQTAQRKIREI 799
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 384 PSPPQRAQRGDHSSR----EQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 439
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 440 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT-SEACRMILEIMQKEADETKLAEE--I 496
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 497 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 552
Query: 541 EHLISA 546
E SA
Sbjct: 553 EACASA 558
>gi|126308261|ref|XP_001367379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Monodelphis domestica]
Length = 577
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 160/398 (40%), Gaps = 72/398 (18%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPT 182
QP D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S+P
Sbjct: 192 QPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTP- 250
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
E +A +L++ + + D +
Sbjct: 251 ---------------------EGCSSACKMILEIMQK----------EAKDTKTADEVPL 279
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGSIENCC 337
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
+A E+ + + D S Q+ P +A + SS
Sbjct: 338 KAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPSSVS 391
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+ P+ S P +M +++ A +G +IGK G ++KQ
Sbjct: 392 GAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQHIKQ 430
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EK 477
L + ASI + AP ++ + +R G P A ++ K E + E+
Sbjct: 431 LSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 486 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|387017714|gb|AFJ50975.1| Poly(rC)-binding protein 2-like [Crotalus adamanteus]
Length = 347
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 86/344 (25%), Positives = 146/344 (42%), Gaps = 76/344 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTASSRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHSPPAPMADMHPLGNSSWP------A 354
+ ++ ++P K +P PSS P + GGQ+ +S G++S+P
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSS----------GSASYPHTAPSMC 211
Query: 355 RNSSLHGMPSTPWM--GGYGD-------------QPSRMGSGSINSCPPGQMGEVSAEFS 399
NS L G P + G Y Q S N+ + + S
Sbjct: 212 LNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSAGLDASAQTTS 271
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
++ IG +IG+ G + +++Q +GA I + + S +R
Sbjct: 272 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 315
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ S + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--SSRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 269 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 321
Query: 539 SSEHL 543
S+ +
Sbjct: 322 SAASI 326
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|363747261|ref|XP_003643959.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Gallus
gallus]
Length = 348
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/356 (25%), Positives = 150/356 (42%), Gaps = 88/356 (24%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHSPPAPMADMHPLGNSSWP------A 354
+ ++ ++P K +P PSS P + GGQ+ +S G++S+P
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSS----------GSASYPHTAPSMC 211
Query: 355 RNSSLHGMPSTPWM--GGYG-DQP-------------------SRMGSGSINSCPPGQMG 392
NS L G P + G Y QP G I S P G
Sbjct: 212 LNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKG 271
Query: 393 ----EVSAE-FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ SA+ S ++ IG +IG+ G + +++Q +GA I + + S +R
Sbjct: 272 YWGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 327
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 281 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 333
Query: 539 SSEHL 543
S+ +
Sbjct: 334 SAASI 338
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|356564071|ref|XP_003550280.1| PREDICTED: uncharacterized protein LOC100782717 [Glycine max]
Length = 672
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 90/194 (46%), Gaps = 27/194 (13%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
+I P+ ++G +IGK G +K L+ ++ AKI V D P S R + + SP IA
Sbjct: 127 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPDAIATA 186
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
+ ++ AE + I+ + G SD+ +P
Sbjct: 187 EKLINEVLAEAETGG---------------SGIVARRVAGQAGSDEYVSK--------IP 223
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
NN VG ++GK G+ I+ +++ TGA I+V+P LPP +T+ ++I G P + A
Sbjct: 224 NNKVGLVIGKGGETIKNMQASTGARIQVIPL-HLPPGDTSTERTLKIEGTPEQIESAKQM 282
Query: 308 VSTLLHQNPRKDKP 321
V+ ++ R+ P
Sbjct: 283 VNQVISGENRQRNP 296
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 21/162 (12%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIRASAFEGLWN 455
S KI G++G +IGKGG +K LQ ++GA I V DA +S R +
Sbjct: 125 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSATRTVELMGSPDAIA 184
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITTRLL-----------VPSSKVGCILGQGGHVINE 504
+ I+ +L +E G + R+ +P++KVG ++G+GG I
Sbjct: 185 TAEKLINEVL----AEAETGGSGIVARRVAGQAGSDEYVSKIPNNKVGLVIGKGGETIKN 240
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
M+ T A I+V+ + D S+E + I G+ E + SA
Sbjct: 241 MQASTGARIQVIPLHLPPGD---TSTERTLKIEGTPEQIESA 279
>gi|148672030|gb|EDL03977.1| poly(rC) binding protein 2, isoform CRA_d [Mus musculus]
Length = 316
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/328 (24%), Positives = 139/328 (42%), Gaps = 73/328 (22%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
+A+ K II EED+ M + +T RL+V
Sbjct: 66 ---------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLG--NSSWPAR--N 356
++ ++ ++P K +P PSS P + G + +H L S +P N
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSSSPVIFAG-------GQLTKLHQLAMQQSHFPMTHGN 213
Query: 357 SSLHGMP-STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGK 415
+ G+ S+P + GY + + S P + IG +IG+
Sbjct: 214 TGFSGIESSSPEVKGYWGLDASAQTTSHELTIPNDL-----------------IGCIIGR 256
Query: 416 GGFNVKQLQQETGASIHVEDAPTDSDER 443
G + +++Q +GA I + + S +R
Sbjct: 257 QGAKINEIRQMSGAQIKIANPVEGSTDR 284
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 238 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 290
Query: 539 SSEHL 543
S+ +
Sbjct: 291 SAASI 295
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|449492580|ref|XP_002192437.2| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
[Taeniopygia guttata]
Length = 584
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 162/401 (40%), Gaps = 79/401 (19%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKI 184
+D R+L P++ +G +IGK G ++++ ++TQ+KI + G+ E+ I I+S+P
Sbjct: 195 SDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTP--- 251
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
E C K+ I++++ + D I ++
Sbjct: 252 ----------------EGCSTAC-------KIIMEIMQKE------AQDTKFTEEIPLKI 282
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L NN VG L+GK G ++++ +T I + P L N + + + G +A
Sbjct: 283 LAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIETCAKA 340
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG-----NSSWPARNSSL 359
E+ + + S+ N + P +++ LG +S P S+
Sbjct: 341 EEEIMKKIRE---------SYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSV 391
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ +G QP ++ + A +G +IGK G +
Sbjct: 392 ASAAAAASYPPFGQQPESE--------------------TVHLFIPALAVGAIIGKQGQH 431
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + GASI + AP + + +R G P A ++ K E +
Sbjct: 432 IKQLSRFAGASIKI--APAEGPDAKLRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 486
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + + VPS G ++G+GG +NE++ T A++ V
Sbjct: 487 KEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVV 527
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 39/193 (20%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIY 178
FG ++TV+ + P+ +G +IGK G +K L A I +A P ++ R++II
Sbjct: 403 FGQQPESETVH-LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 461
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
P K Q +++ ++ EE+ FG E
Sbjct: 462 GPPEAQFKAQG-------------------------RIYGKLKEENFFG------PKEEV 490
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-- 296
+ A + VP+ G ++GK G + L++ T A + V+P D+ P N +V+I+G
Sbjct: 491 KLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 547
Query: 297 -KPNVAKRALYEV 308
+A+R + E+
Sbjct: 548 YACQLAQRKIQEI 560
>gi|149036630|gb|EDL91248.1| similar to Pol(yrC)-binding protein 1 (Alpha-CP1) (hnRNP-E1)
(predicted) [Rattus norvegicus]
Length = 337
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 102/433 (23%), Positives = 172/433 (39%), Gaps = 111/433 (25%)
Query: 137 RKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAA 196
+++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 4 KEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------------- 46
Query: 197 ETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
+A+ K II EED+ M + +T RL+VP G
Sbjct: 47 --------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGS 92
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
L+GK G I+ +R TGA ++V D LP +T+ + I+G P + ++ ++
Sbjct: 93 LIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQICLVML 148
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST------PW 367
+ + Q+ G+ P PM P+ + R S G P P
Sbjct: 149 E---------TLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPP 199
Query: 368 MGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQET 427
+ Y Q G +I+ ++ +V+ + S + G GF
Sbjct: 200 LDAYSIQ----GQHTISPLDLAKLNQVARQQSHFAMMHGGT--------GF--------- 238
Query: 428 GASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVP 487
A DS ++ G W ++DA Q T L +P
Sbjct: 239 --------AGIDSSSPEVK-----GYW----ASLDASTQ-------------TTHELTIP 268
Query: 488 SSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAH 547
++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+ + A
Sbjct: 269 NNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSAASISLAQ 321
Query: 548 GTYQSFMTSGQSM 560
+ ++S + M
Sbjct: 322 YLINARLSSEKGM 334
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K NSS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 47 NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTL-RLVVPATQCGSLIGKGGCKIKEIR 105
Query: 155 EETQAKITVA-DTIPGSEERVIIIYSSPTKIAK 186
E T A++ VA D +P S ER I I P + +
Sbjct: 106 ESTGAQVQVAGDMLPNSTERAITIAGVPQSVTE 138
>gi|363747263|ref|XP_003643960.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Gallus
gallus]
Length = 349
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 92/357 (25%), Positives = 150/357 (42%), Gaps = 89/357 (24%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHSPPAPMADMHPLGNSSWP------A 354
+ ++ ++P K +P PSS P + GGQ+ +S G++S+P
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYSS----------GSASYPHTAPSMC 211
Query: 355 RNSSLHGMPSTPWM--GGYG-DQP-------------------SRMGSGSINSCPPGQMG 392
NS L G P + G Y QP G I S P G
Sbjct: 212 LNSDLEGPPQEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSGIESSSPEVKG 271
Query: 393 -----EVSAE-FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ SA+ S ++ IG +IG+ G + +++Q +GA I + + S +R
Sbjct: 272 YWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 328
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 282 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 334
Query: 539 SSEHL 543
S+ +
Sbjct: 335 SAASI 339
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|291234615|ref|XP_002737239.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1-like
[Saccoglossus kowalevskii]
Length = 655
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 100/419 (23%), Positives = 176/419 (42%), Gaps = 68/419 (16%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE--ERVIIIYSSPTKI 184
D R+L PS +G +IGK G ++ + ++T+AK+ + + + E+ I IY +P +
Sbjct: 227 DLPVRLLVPSSMVGAIIGKKGANIRLITQQTKAKVDILRSKENASALEKAINIYGTPLQC 286
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA-- 242
+ T E + M ++++ N +I
Sbjct: 287 SNTV----------------------------------EQIMETMVKENESANPSIEIPL 312
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
+LL N++VG L+GK G + ++ E+ + + L N + + I G N
Sbjct: 313 KLLAHNSLVGRLIGKGGTTLNKIMEESNTKVSISNLQEL--TIYNMERTITIKGSLNDEC 370
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
+A VS L + R D +S Q Y N + LGNS N ++H
Sbjct: 371 KAEEMVSEKLRDSFRADM--ASLTQQY---NLFPGLNHASVFSGLGNSPGAIFNVAMHN- 424
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
S +G + + + P E++ F I SA +G +IG G +++
Sbjct: 425 -SAVLYAIFGPAAYTVNTHHLLQPPS----EITYLF---IPISA--VGAIIGVKGQEIRE 474
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF-SEKGTI- 480
+ Q++ A + VE ++ DE RA EG P +Q I ++ S KG +
Sbjct: 475 ISQKSSAKVRVEPPRSEDDEE--RAVYIEGY--PDAQWIAQWFIYHKILTDVCSGKGEVR 530
Query: 481 -TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
+ ++VP++ VG I+G+ G I ++ T A+I V +K D + E +V I+G
Sbjct: 531 LISEIMVPANMVGRIIGKRGSAIQDLELLTGAEID-VPKNIKPNDKN----EVVVRIKG 584
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S + +++L + +G +IGK G N++ + Q+T A + + + + ASA E
Sbjct: 225 SIDLPVRLLVPSSMVGAIIGKKGANIRLITQQTKAKVDILRSKEN-------ASALEKAI 277
Query: 455 NPR------SQTIDAILQLQNKTSEFSEKGT-ITTRLLVPSSKVGCILGQGGHVINEMRR 507
N S T++ I++ K +E + I +LL +S VG ++G+GG +N++
Sbjct: 278 NIYGTPLQCSNTVEQIMETMVKENESANPSIEIPLKLLAHNSLVGRLIGKGGTTLNKIME 337
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+ + + LQ+ + E + I+GS
Sbjct: 338 ESNTKVSI----SNLQELTIYNMERTITIKGS 365
>gi|357140395|ref|XP_003571754.1| PREDICTED: uncharacterized protein LOC100835547 [Brachypodium
distachyon]
Length = 692
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 97/198 (48%), Gaps = 28/198 (14%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVI 175
S+G Q T +I P+ ++G +IGK+G +K L+ ++ AKI V D PGS+ R +
Sbjct: 134 SYGGYQSGSTTKKIDIPNGRVGVIIGKSGETIKHLQLQSGAKIQVTRDMDVQPGSQTRSV 193
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN 235
+ +P +I++ + D AE S V +R G
Sbjct: 194 DLSGTPEQISRAEELIRDVLAEADAGSSG----------TVSNRKYNAPQPGAE------ 237
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
++ + NN VG ++GK G+ I+ +++++GA I+V+P LPP +T+ + I
Sbjct: 238 -----QFQMQIANNKVGLVIGKGGETIKSMQAKSGARIQVIPL-HLPPGDTSTERTLYID 291
Query: 296 GKPN---VAKRALYEVST 310
G + +AK+ + EV++
Sbjct: 292 GTTDQIEIAKQLVAEVTS 309
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 15/164 (9%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIRAS 448
G S + KI G++G +IGK G +K LQ ++GA I V D S R + S
Sbjct: 137 GYQSGSTTKKIDIPNGRVGVIIGKSGETIKHLQLQSGAKIQVTRDMDVQPGSQTRSVDLS 196
Query: 449 AFEGLWNPRSQTIDAILQ---------LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGG 499
+ + I +L + N+ + G ++ + ++KVG ++G+GG
Sbjct: 197 GTPEQISRAEELIRDVLAEADAGSSGTVSNRKYNAPQPGAEQFQMQIANNKVGLVIGKGG 256
Query: 500 HVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
I M+ ++ A I+V+ + D S+E + I G+++ +
Sbjct: 257 ETIKSMQAKSGARIQVIPLHLPPGD---TSTERTLYIDGTTDQI 297
>gi|356514579|ref|XP_003525983.1| PREDICTED: uncharacterized protein LOC100797476 [Glycine max]
Length = 554
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 88/184 (47%), Gaps = 30/184 (16%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
+I P+ ++G +IGK G +K L+ ++ AKI + D P S R + + +P I+
Sbjct: 87 KIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQITRDIDADPNSSTRTVELMGTPEAISSA 146
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
+ ++ AE + I+ G SD+ + +P
Sbjct: 147 EKLINEVLAEAESGG---------------SGIVTRRFTGQAGSDE--------FVMKIP 183
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP---NVAKRA 304
NN VG ++GK G+ I+ +++ TGA I+V+P LPP +T+ ++I G P AK+
Sbjct: 184 NNKVGLIIGKGGETIKNMQASTGARIQVIPL-HLPPGDTSTERTLKIDGTPEQIESAKQL 242
Query: 305 LYEV 308
+Y+V
Sbjct: 243 VYQV 246
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 77/162 (47%), Gaps = 21/162 (12%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIRASAFEGLWN 455
S KI G++G +IGKGG +K LQ ++GA I + DA +S R + +
Sbjct: 85 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQITRDIDADPNSSTRTVELMGTPEAIS 144
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITTR-----------LLVPSSKVGCILGQGGHVINE 504
+ I+ +L +E G +T R + +P++KVG I+G+GG I
Sbjct: 145 SAEKLINEVL----AEAESGGSGIVTRRFTGQAGSDEFVMKIPNNKVGLIIGKGGETIKN 200
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
M+ T A I+V+ + D S+E + I G+ E + SA
Sbjct: 201 MQASTGARIQVIPLHLPPGD---TSTERTLKIDGTPEQIESA 239
>gi|410920039|ref|XP_003973491.1| PREDICTED: poly(rC)-binding protein 2-like [Takifugu rubripes]
Length = 327
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/341 (24%), Positives = 145/341 (42%), Gaps = 66/341 (19%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ ER+I + T I K
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTAIFK--- 70
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
A + D++ EED+ M + +T R++VP +
Sbjct: 71 ----------------------AFSMIIDKL-EEDISSSMTNSTATSKPPVTLRIVVPAS 107
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R TGA ++V D LP +T+ + I+G + + ++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGTAHSIIECVKQIC 163
Query: 310 TLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
++ ++P K +P PS P QAY Q H+ P P + +++ + S
Sbjct: 164 VVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDSS-----SAAISPQLS 218
Query: 358 SLH--GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGK 415
LH M P+ +Q S +C S ++ IG +IG+
Sbjct: 219 KLHQLAMQQGPFPMATCNQGFTGMDASAQAC------------SHEMTIPNDLIGCIIGR 266
Query: 416 GGFNVKQLQQETGASIHVE---DAPTDSDERVIRASAFEGL 453
G + +++Q +GA I + D TD + + A GL
Sbjct: 267 QGAKISEIRQMSGAQIKIANPVDGSTDRQVTITGSPASIGL 307
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 89/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S ID + + + N T+ + K +T R++VP+S+ G ++G+GG I E+
Sbjct: 66 TAIFKAFSMIIDKLEEDISSSMTNSTA--TSKPPVTLRIVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G++ +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGTAHSII 156
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 102/241 (42%), Gaps = 49/241 (20%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSE 171
+SS S S+P T+ RI+ P+ + G +IGK G +K +RE T A++ VA D +P S
Sbjct: 84 SSSMTNSTATSKPPVTL-RIVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST 142
Query: 172 ERVIIIYSSPTKIAKTQNKDDDSAAET----------KKESMEP---------------- 205
ER I I + I + + E+ K S P
Sbjct: 143 ERAITIAGTAHSIIECVKQICVVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHA 202
Query: 206 -------HCAAQDALLKVHDRIIEEDLFGGMASDD------DNENSTITARLLVPNNMVG 252
A L K+H +++ F MA+ + D + + +PN+++G
Sbjct: 203 IPQPDSSSAAISPQLSKLHQLAMQQGPF-PMATCNQGFTGMDASAQACSHEMTIPNDLIG 261
Query: 253 CLLGKRGDVIQRLRSETGANIRVL-PADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTL 311
C++G++G I +R +GA I++ P D +TD V I+G P A Y +
Sbjct: 262 CIIGRQGAKISEIRQMSGAQIKIANPVDG------STDRQVTITGSPASIGLAEYLIKAR 315
Query: 312 L 312
L
Sbjct: 316 L 316
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|193083112|ref|NP_001122385.1| poly(rC)-binding protein 2 isoform f [Homo sapiens]
gi|66911068|gb|AAH97410.1| Pcbp2 protein [Rattus norvegicus]
gi|78395095|gb|AAI07689.1| PCBP2 protein [Homo sapiens]
gi|417399138|gb|JAA46599.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 335
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 142/338 (42%), Gaps = 76/338 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKDKP----------PSSFP------QAYGGQNFHSPPAP-MADMHPLG-- 348
+ ++ + + P PSS P QAY Q ++ P P + +H L
Sbjct: 162 ICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQ 221
Query: 349 NSSWPAR--NSSLHGMP-STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCS 405
S +P N+ G+ S+P + GY + + S ++
Sbjct: 222 QSHFPMTHGNTGFSGIESSSPEVKGYW----------------AGLDASAQTTSHELTIP 265
Query: 406 AGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
IG +IG+ G + +++Q +GA I + + S +R
Sbjct: 266 NDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 303
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPS 565
R T A ++V G D P S+E + I G + +I Q + +++ P
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSIIEC--VKQICVVMLETLSQSPP 175
Query: 566 SYQNI--NPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSYPMHTHQ 623
I P+ SS + + +Y T Q Y + + QQS +PM TH
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQAY----TIQGQYAIPQPDLTKLHQLAMQQSHFPM-THG 230
Query: 624 GAG 626
G
Sbjct: 231 NTG 233
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 257 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 309
Query: 539 SSEHL 543
S+ +
Sbjct: 310 SAASI 314
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|426201505|gb|EKV51428.1| hypothetical protein AGABI2DRAFT_182391 [Agaricus bisporus var.
bisporus H97]
Length = 340
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/327 (24%), Positives = 135/327 (41%), Gaps = 78/327 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R L ++ G +IGKAG V LRE+T K V+ IPG ERV+ + S
Sbjct: 27 LRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVSGS--------- 77
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI--TARLLVP 247
DA+ K + II + + AS + STI + RLL+
Sbjct: 78 --------------------VDAVAKAYTLIITQLVTASPASPVVSSPSTIHTSIRLLIS 117
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+N++G ++G+ G I+ ++ +GA + V + LP +T+ +V++ G P RA+ E
Sbjct: 118 HNLMGTIIGRNGLKIKAIQDNSGARM-VASKEMLP---QSTERIVEVQGAPEAIGRAVEE 173
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPW 367
+ L ++ + + G FH P + D S R S P
Sbjct: 174 IGKCLLED---------WERGLGTVLFH--PGTVDD-----RSGGNRRQGSYSASPQ--- 214
Query: 368 MGGYGDQPSRMGSGS---------------INSCPPGQMGEVSAEFSMKILCSAGKIGGV 412
YG Q G G+ I+S PP + + I + +G +
Sbjct: 215 ---YGAQRRANGDGNVRARASPPASPTHSPISSQPPANL------RTQNISIPSDMVGCI 265
Query: 413 IGKGGFNVKQLQQETGASIHVEDAPTD 439
IG+ G + ++++ +G+ I + AP D
Sbjct: 266 IGRSGTKITEIRRLSGSKISIAKAPHD 292
Score = 47.4 bits (111), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLWNP 456
+++ L S G +IGK G NV L+++TG V ERV+ S + + +
Sbjct: 25 LTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVSGSVDAVAKA 84
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITT--RLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ I ++ + S TI T RLL+ + +G I+G+ G I ++ + A R
Sbjct: 85 YTLIITQLVTASPASPVVSSPSTIHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGA--R 142
Query: 515 VVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+V ++ L P S+E IV+++G+ E +
Sbjct: 143 MVASKEML----PQSTERIVEVQGAPEAI 167
Score = 39.3 bits (90), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R +G+ I + A P + M I G P
Sbjct: 252 TQNISIPSDMVGCIIGRSGTKITEIRRLSGSKISIAKA----PHDETGERMFTIVGTPEA 307
Query: 301 AKRALY 306
++AL+
Sbjct: 308 NEKALF 313
>gi|26336871|dbj|BAC32119.1| unnamed protein product [Mus musculus]
Length = 577
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 87/398 (21%), Positives = 159/398 (39%), Gaps = 72/398 (18%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPT 182
QP D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S+P
Sbjct: 192 QPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTP- 250
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
E +A +L++ + + D +
Sbjct: 251 ---------------------EGCSSACKMILEIMHK----------EAKDTKTADEVPL 279
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIENCC 337
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
RA E+ + + D S Q+ P +A + SS
Sbjct: 338 RAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPSSVT 391
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+ P+ S P M +++ A +G +IGK G ++KQ
Sbjct: 392 GAAPY-------------SSFMQAPEQGM--------VQVFIPAQAVGAIIGKKGQHIKQ 430
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EK 477
L + ASI + AP ++ + +R G P A ++ K E + E+
Sbjct: 431 LSRFASASIKI--APPETPDSKVRMVVITG---PPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 486 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|348502908|ref|XP_003439009.1| PREDICTED: poly(rC)-binding protein 2-like [Oreochromis niloticus]
Length = 324
Score = 73.9 bits (180), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 79/328 (24%), Positives = 139/328 (42%), Gaps = 65/328 (19%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ ER+I + T I K
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTTSIFK--- 70
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
A + +++ EED+ M + +T RL+VP +
Sbjct: 71 ----------------------AFSMIIEKL-EEDISTSMTNSTATSKPPVTMRLVVPAS 107
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R GA ++V D LP +T+ + ++G P + ++
Sbjct: 108 QCGSLIGKGGCKIKEIRESAGAQVQV-AGDMLPN---STERAITVAGTPQSIIECVKQIC 163
Query: 310 TLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
++ ++P K +P PS P QAY Q H+ P P P +
Sbjct: 164 IVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHAIPQPDVSEGP--------SLT 215
Query: 358 SLH--GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGK 415
LH M +P+ + +Q + G M + S ++ IG +IG+
Sbjct: 216 KLHQLAMQQSPFPIAHSNQGFQAG-----------MDASAQTGSHELTIPNDLIGCIIGR 264
Query: 416 GGFNVKQLQQETGASIHVEDAPTDSDER 443
G + +++Q +GA I + + S +R
Sbjct: 265 QGAKINEIRQMSGAQIKIANPVEGSTDR 292
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 85/157 (54%), Gaps = 12/157 (7%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAI---LQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
++ S I+ + + S + K +T RL+VP+S+ G ++G+GG I E+R
Sbjct: 66 TSIFKAFSMIIEKLEEDISTSMTNSTATSKPPVTMRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
A ++V G D P S+E + + G+ + +I
Sbjct: 126 SAGAQVQVAG------DMLPNSTERAITVAGTPQSII 156
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/237 (23%), Positives = 101/237 (42%), Gaps = 43/237 (18%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSE 171
++S S S+P T+ R++ P+ + G +IGK G +K +RE A++ VA D +P S
Sbjct: 84 STSMTNSTATSKPPVTM-RLVVPASQCGSLIGKGGCKIKEIRESAGAQVQVAGDMLPNST 142
Query: 172 ERVIIIYSSPTKIAKTQNK------------------------------DDDSAAETKKE 201
ER I + +P I + + A + +
Sbjct: 143 ERAITVAGTPQSIIECVKQICIVMLESPPKGVTIPYRPKPSGSPVIFAGGQAYAVQGQHA 202
Query: 202 SMEPHCAAQDALLKVHDRIIEEDLF------GGMASDDDNENSTITARLLVPNNMVGCLL 255
+P + +L K+H +++ F G + D T + L +PN+++GC++
Sbjct: 203 IPQPDVSEGPSLTKLHQLAMQQSPFPIAHSNQGFQAGMDASAQTGSHELTIPNDLIGCII 262
Query: 256 GKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
G++G I +R +GA I++ P +TD V I+G A Y ++ L
Sbjct: 263 GRQGAKINEIRQMSGAQIKI-----ANPVEGSTDRQVTITGSHASISLAEYLINARL 314
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 13/71 (18%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS
Sbjct: 250 ELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITGSHAS 302
Query: 540 ---SEHLISAH 547
+E+LI+A
Sbjct: 303 ISLAEYLINAR 313
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|242020720|ref|XP_002430800.1| predicted protein [Pediculus humanus corporis]
gi|212515997|gb|EEB18062.1| predicted protein [Pediculus humanus corporis]
Length = 515
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 91/405 (22%), Positives = 169/405 (41%), Gaps = 70/405 (17%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIYSS 180
++ D RIL S +G +IG+ G ++ + ++T+A++ V D + GS E+ I IY +
Sbjct: 109 ARQTDFPLRILVQSDMVGAIIGRQGTTIRQITQQTRARVDVHRKDNV-GSLEKAITIYGN 167
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS-T 239
P D+ KK +L+V M ++ N N
Sbjct: 168 P----------DNCTNACKK------------ILEV------------MQAEASNTNKGE 193
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
I+ ++L NN++G ++GK G+ I+R+ +T + I V + + + N + ++ + G +
Sbjct: 194 ISLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITVSSINDI--NSFNLERIITVKGTID 251
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+S L Q+ D + PQ H P M + +G SS P
Sbjct: 252 NMSRAESEISAKLRQSYENDLQAMA-PQTMMFPGLH--PMAMMSTNNMGYSSRPG----- 303
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQ---MGEVSAEFSMKILCSAGKIGGVIGKG 416
+ G YG S P Q G S E + + ++ +G +IG
Sbjct: 304 ------AFGGVYGSGAPIPYSPIYPPAGPQQGPSQGGDSQETTFLFIPNSA-VGAIIGTK 356
Query: 417 GFNVKQLQQETGASIHVEDAPTD------SDERVIRASAFEGLWNPRSQTIDAILQLQNK 470
G +++ + + +GAS+ + + ++ +V E W + + + +
Sbjct: 357 GTHIRNIIRFSGASVKIASLEQEKGTEPPAERKVTIVGTPESQWKAQYLIFEKM-----R 411
Query: 471 TSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
F G +L V VG I+G+GG + E++ T + I++
Sbjct: 412 EEGFIGSGNDDVKLTV-EILVGRIIGKGGQNVRELQHATGSIIKL 455
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 89/181 (49%), Gaps = 11/181 (6%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+F ++IL + +G +IG+ G ++Q+ Q+T A + V D+ + +A G +
Sbjct: 113 DFPLRILVQSDMVGAIIGRQGTTIRQITQQTRARVDVHRK--DNVGSLEKAITIYGNPDN 170
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ IL++ + + KG I+ ++L ++ +G I+G+GG+ I + + T + I V
Sbjct: 171 CTNACKKILEVMQAEASNTNKGEISLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITV- 229
Query: 517 GARVKLQDPHPGSSECIVDIRGSSEHLISAHGTY-----QSFMTSGQSMKVQPSSYQNIN 571
+ D + + E I+ ++G+ +++ A QS+ Q+M Q + ++
Sbjct: 230 ---SSINDINSFNLERIITVKGTIDNMSRAESEISAKLRQSYENDLQAMAPQTMMFPGLH 286
Query: 572 P 572
P
Sbjct: 287 P 287
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 47/220 (21%), Positives = 92/220 (41%), Gaps = 34/220 (15%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIY 178
N+ + +IL + IG +IGK GN +K + ++T +KITV+ D + ER+I +
Sbjct: 188 NTNKGEISLKILAHNNLIGRIIGKGGNTIKRIMQDTDSKITVSSINDINSFNLERIITVK 247
Query: 179 SSPTKIAKT---------QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE--DLFG 227
+ +++ Q+ ++D A + M P A++ ++ FG
Sbjct: 248 GTIDNMSRAESEISAKLRQSYENDLQAMAPQTMMFPGLHPM-AMMSTNNMGYSSRPGAFG 306
Query: 228 GMASD-------------------DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSE 268
G+ +S T L +PN+ VG ++G +G I+ +
Sbjct: 307 GVYGSGAPIPYSPIYPPAGPQQGPSQGGDSQETTFLFIPNSAVGAIIGTKGTHIRNIIRF 366
Query: 269 TGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+GA++++ ++ + V I G P +A Y +
Sbjct: 367 SGASVKIASLEQEKGTEPPAERKVTIVGTPESQWKAQYLI 406
>gi|398397391|ref|XP_003852153.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
gi|339472034|gb|EGP87129.1| hypothetical protein MYCGRDRAFT_109444 [Zymoseptoria tritici
IPO323]
Length = 362
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 81/347 (23%), Positives = 156/347 (44%), Gaps = 49/347 (14%)
Query: 107 KKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT 166
K G + R ++ A R + S++ G +IGKAG V LR++T + V+
Sbjct: 20 KMGGLNADERPRTEEEYAQAQLTLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKV 79
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
+PG +RV+ + + T IA DA V D +++
Sbjct: 80 VPGVHDRVLTVTGALTGIA-------------------------DAYGLVADSLVKGAPQ 114
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GM + N T RLL+ +N +G ++G++G I++++ +G +R++ + P
Sbjct: 115 MGMGGVVGSPN-THPIRLLISHNQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLP--Q 169
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
+T+ +V++ G P +++++E+ L + ++ + A Q +PPA + P
Sbjct: 170 STERIVEVQGTPEGIQKSVWEIGKCLIDDEQRGYGTVLYSPAVRVQG-GAPPA-INGASP 227
Query: 347 LGNSSWPARNSS--------LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF 398
+G R+ + G P++ + P R GS ++ PP + +
Sbjct: 228 VGFGGGAPRSFARTGNGADFTSGAPASSY-------PPRRNGGS-DAGPPPVVEDGEDIQ 279
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD-SDERV 444
+ I A +G +IG+GG + ++++ +GA I + AP D S ER+
Sbjct: 280 TQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAKAPHDESGERM 326
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 85/171 (49%), Gaps = 10/171 (5%)
Query: 377 RMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 436
+MG + + P + A+ +++ + ++ + G +IGK G NV L+ +TG V
Sbjct: 20 KMGGLNADERPRTEEEYAQAQLTLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKV 79
Query: 437 PTDSDERVIRAS-AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITT---RLLVPSSKVG 492
+RV+ + A G+ + D++++ + G+ T RLL+ +++G
Sbjct: 80 VPGVHDRVLTVTGALTGIADAYGLVADSLVKGAPQMGMGGVVGSPNTHPIRLLISHNQMG 139
Query: 493 CILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
I+G+ G I ++ + + +R+V + L P S+E IV+++G+ E +
Sbjct: 140 TIIGRQGLKIKQI--QDASGVRMVAQKEML----PQSTERIVEVQGTPEGI 184
>gi|495128|emb|CAA53546.1| mCBP [Mus musculus]
Length = 331
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 144/334 (43%), Gaps = 72/334 (21%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLG--NSSW 352
+ ++ ++P K +P PSS P QAY Q ++ P P + +H L S +
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHF 221
Query: 353 PAR--NSSLHGMP-STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
P N+ G+ S+P + GY + + S ++ I
Sbjct: 222 PMTHGNTGFSGIESSSPEVKGYW----------------AGLDASAQTTSHELTIPNDLI 265
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
G +I + G + +++Q +GA I + + S +R
Sbjct: 266 GCIIRRQGAKINEIRQMSGAQIKIANPVEGSTDR 299
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|409083451|gb|EKM83808.1| hypothetical protein AGABI1DRAFT_117279 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 340
Score = 73.6 bits (179), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 80/327 (24%), Positives = 135/327 (41%), Gaps = 78/327 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R L ++ G +IGKAG V LRE+T K V+ IPG ERV+ + S
Sbjct: 27 LRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVSGS--------- 77
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI--TARLLVP 247
DA+ K + II + + AS + ST+ + RLL+
Sbjct: 78 --------------------VDAVAKAYTLIITQLVTASPASPVVSSPSTVHTSIRLLIS 117
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+N++G ++G+ G I+ ++ +GA + V + LP +T+ +V++ G P RA+ E
Sbjct: 118 HNLMGTIIGRNGLKIKAIQDNSGARM-VASKEMLP---QSTERIVEVQGAPEAIGRAVEE 173
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPW 367
+ L ++ + + G FH P + D S R S P
Sbjct: 174 IGKCLLED---------WERGLGTVLFH--PGTVDD-----RSGGNRRQGSYSASPQ--- 214
Query: 368 MGGYGDQPSRMGSGS---------------INSCPPGQMGEVSAEFSMKILCSAGKIGGV 412
YG Q G G+ I+S PP + + I + +G +
Sbjct: 215 ---YGAQRRANGDGNVRARASPPASPTHSPISSQPPANL------RTQNISIPSDMVGCI 265
Query: 413 IGKGGFNVKQLQQETGASIHVEDAPTD 439
IG+ G + ++++ +G+ I + AP D
Sbjct: 266 IGRSGTKITEIRRLSGSKISIAKAPHD 292
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 73/149 (48%), Gaps = 9/149 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLWNP 456
+++ L S G +IGK G NV L+++TG V ERV+ S + + +
Sbjct: 25 LTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIPGVHERVLTVSGSVDAVAKA 84
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITT--RLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ I ++ + S T+ T RLL+ + +G I+G+ G I ++ + A R
Sbjct: 85 YTLIITQLVTASPASPVVSSPSTVHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGA--R 142
Query: 515 VVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+V ++ L P S+E IV+++G+ E +
Sbjct: 143 MVASKEML----PQSTERIVEVQGAPEAI 167
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R +G+ I + A P + M I G P
Sbjct: 252 TQNISIPSDMVGCIIGRSGTKITEIRRLSGSKISIAKA----PHDETGERMFTIVGTPEA 307
Query: 301 AKRALY 306
++AL+
Sbjct: 308 NEKALF 313
>gi|351713542|gb|EHB16461.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Heterocephalus
glaber]
Length = 577
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 88/401 (21%), Positives = 159/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E C R+I E + + D
Sbjct: 249 TP-------------------EGCSSAC-----------RMILEIMHK--EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E++ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEITKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 389 SVSGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|344266065|ref|XP_003405101.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Loxodonta
africana]
Length = 293
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/225 (28%), Positives = 105/225 (46%), Gaps = 14/225 (6%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDAL 213
E T A++ VA D +P S ER I I P I + + E + + Q L
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLEAYTIQGQ-YAIPQPDL 183
Query: 214 LKVHDRIIEEDLF------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRS 267
K+H +++ F G ++ D T + L +PN+++GC++G++G I +R
Sbjct: 184 TKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQ 243
Query: 268 ETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+GA I++ P +TD V I+G A Y ++ L
Sbjct: 244 MSGAQIKI-----ANPVEGSTDRQVTITGSAASISLAQYLINVRL 283
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/320 (24%), Positives = 133/320 (41%), Gaps = 80/320 (25%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
+A+ K II EED+ M + +T RL+V
Sbjct: 66 ---------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVK 160
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAP-MADMHPLG--NSSWPARNSSLHGMP 363
++ ++ +AY Q ++ P P + +H L S +P HG
Sbjct: 161 QICVVML-------------EAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMT----HG-- 201
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
+T + G D ++ S + P + IG +IG+ G + ++
Sbjct: 202 NTGFSAGL-DASAQTTSHELT--IPNDL-----------------IGCIIGRQGAKINEI 241
Query: 424 QQETGASIHVEDAPTDSDER 443
+Q +GA I + + S +R
Sbjct: 242 RQMSGAQIKIANPVEGSTDR 261
Score = 53.9 bits (128), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/182 (24%), Positives = 82/182 (45%), Gaps = 43/182 (23%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE-DAPTDSDERVI----------- 445
+++++ A + G +IGKGG +K++++ TGA + V D +S ER I
Sbjct: 98 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGIPQSIIE 157
Query: 446 ----------RASAFEGLWNPRSQTIDAILQLQNKTSEF--------------SEKGTIT 481
A +G + + + QL + S F + T +
Sbjct: 158 CVKQICVVMLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTS 217
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSE 541
L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS+
Sbjct: 218 HELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITGSAA 270
Query: 542 HL 543
+
Sbjct: 271 SI 272
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|154319404|ref|XP_001559019.1| hypothetical protein BC1G_02183 [Botryotinia fuckeliana B05.10]
Length = 453
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 87/346 (25%), Positives = 149/346 (43%), Gaps = 53/346 (15%)
Query: 119 SFGNSQPADTV----YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
S GN+ P D R + S + VIGK G V +R+ + AK TV+D G+ ER+
Sbjct: 113 SSGNALPHDESGWIHVRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVSDYQKGAVERI 172
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD 234
+ + DA+ K II + + D
Sbjct: 173 LTV-----------------------------SGVVDAVAKAFGLIIRTLNNEPLEAPSD 203
Query: 235 NENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
+ + T RLL+P+ ++G ++GK G I+ ++ +GA R+ +D P ++T+ + +
Sbjct: 204 STSKTYPLRLLIPHILIGSIIGKGGVRIKEIQEASGA--RLNASDSYLP--LSTERSLVV 259
Query: 295 SGKPNVAKRALYEV-STLLHQNPRKDKPP--SSFPQAYGGQNFHSPPA----PMADMHPL 347
G + A Y V STL Q + P S++ GG P A + D H L
Sbjct: 260 LGVADAVHIATYYVGSTLFEQLTERFGGPAASAYASRSGGPAGVVPGAMPNHTVKDRH-L 318
Query: 348 GNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSI-----NSCPPGQ--MGEVSAE-FS 399
NS P + H P+ GG G Q + ++ + P GQ G + + +
Sbjct: 319 TNSQLPLHITGGHASPAVGGYGGVGPQQPQQAGHAVPQPHGATGPQGQPMPGAIPGQPLT 378
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+I +G +IGKGG + +++Q +G+ I + + +S+ER++
Sbjct: 379 QQIFIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLV 424
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 114/252 (45%), Gaps = 32/252 (12%)
Query: 379 GSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT 438
G+ S N+ P + G + ++ + ++ + VIGKGG NV +++ +GA V D
Sbjct: 111 GASSGNALPHDESGWIH----VRSVITSAEAATVIGKGGENVSLVRKLSGAKCTVSDYQK 166
Query: 439 DSDERVIRASAFEGLWNPRSQTIDAILQ-LQNKTSEFSEKGTITT---RLLVPSSKVGCI 494
+ ER++ S G+ + ++ I++ L N+ E T T RLL+P +G I
Sbjct: 167 GAVERILTVS---GVVDAVAKAFGLIIRTLNNEPLEAPSDSTSKTYPLRLLIPHILIGSI 223
Query: 495 LGQGGHVINEMRRRTQADIRVVGARVKLQDPH-PGSSECIVDIRGSSEHLISAHGTYQSF 553
+G+GG I E++ + GAR+ D + P S+E + + G ++ + A TY
Sbjct: 224 IGKGGVRIKEIQEAS-------GARLNASDSYLPLSTERSLVVLGVADAVHIA--TYYVG 274
Query: 554 MTSGQSMKVQ-----PSSY--QNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSP 606
T + + + S+Y ++ P M +H +++ Q P H SP
Sbjct: 275 STLFEQLTERFGGPAASAYASRSGGPAGVVPGAMPNHTVKDRHLTNSQLPLHITGGHASP 334
Query: 607 ----YQNINPQQ 614
Y + PQQ
Sbjct: 335 AVGGYGGVGPQQ 346
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 7/62 (11%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+T ++ +P+ VG I+G+GG INE+R+ + G+ +K+ +P S+E +V I G+
Sbjct: 377 LTQQIFIPNDMVGAIIGKGGAKINEIRQLS-------GSVIKINEPQDNSNERLVTITGT 429
Query: 540 SE 541
+E
Sbjct: 430 AE 431
>gi|395506297|ref|XP_003757471.1| PREDICTED: far upstream element-binding protein 3 [Sarcophilus
harrisii]
Length = 623
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/330 (23%), Positives = 137/330 (41%), Gaps = 84/330 (25%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAK-ITVADT-IPGSEERVIIIYSSPTKI 184
+T+ IL P+ K+G VIGK G +K L+E T K I + D +P ++ + I P K+
Sbjct: 213 NTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDPFKV 272
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
+ A++ +L++ + D F G+ SD + + +
Sbjct: 273 QQ----------------------AREMVLEIIREKDQAD-FRGVRSDFSSRMGGGSIEV 309
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
VP VG ++G+ G++I++++++ G I+ P D + P + + Q+ G P + A
Sbjct: 310 SVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERVAQVMGLPERCQHA 364
Query: 305 LYEVSTLLHQNPRKDKPPS-SFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
+ +S L+ +D S S P+ G G S W
Sbjct: 365 AHVISDLILTAQERDGFGSLSVPRGRG----------------RGRSDW----------- 397
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
S+ + PG + EV+ A K G VIGKGG N+K +
Sbjct: 398 ------------------SVGA--PGGLQEVT------YTVPADKCGLVIGKGGENIKSI 431
Query: 424 QQETGASIHVEDAPTDSDERVIRASAFEGL 453
Q++GA + ++ P + + +R G+
Sbjct: 432 NQQSGAHVELQRNPPPNTDPSVRIFTIRGI 461
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 97/432 (22%), Positives = 164/432 (37%), Gaps = 123/432 (28%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 135 VPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLTGTP------------ 182
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR F +D + N+TI +L+P + VG
Sbjct: 183 -------ESIE---QAKRLLGQIVDRCRNGPGF----HNDVDGNNTIQ-EILIPASKVGL 227
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G P ++A V ++
Sbjct: 228 VIGKGGETIKQLQERTGVKMIMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIR 284
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G D
Sbjct: 285 EKDQAD-----------------------------------------------FRGVRSD 297
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SRMG GSI P F++ I VIG+ G +K++Q + G I
Sbjct: 298 FSSRMGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 340
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTI-DAILQLQNKT------------------SEF 474
+ S ERV + + I D IL Q + S
Sbjct: 341 KPDDGISPERVAQVMGLPERCQHAAHVISDLILTAQERDGFGSLSVPRGRGRGRSDWSVG 400
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ-DPHPGS--SE 531
+ G VP+ K G ++G+GG I + +++ GA V+LQ +P P + S
Sbjct: 401 APGGLQEVTYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPNTDPSV 453
Query: 532 CIVDIRGSSEHL 543
I IRG + +
Sbjct: 454 RIFTIRGIPQQI 465
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 16/175 (9%)
Query: 339 APMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF 398
A + D P N+S P + S++G YG Q + G N G + A
Sbjct: 81 AKIGDAIPHLNNSAPLVDPSVYG---------YGVQKRPLDDGVGNQL--GALVHQRAVI 129
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER--VIRAS--AFEGLW 454
+ + +G +IG+GG + ++Q E+G I + + ER V+ + + E
Sbjct: 130 TEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLTGTPESIEQAK 189
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
Q +D ++ TI +L+P+SKVG ++G+GG I +++ RT
Sbjct: 190 RLLGQIVDRCRNGPGFHNDVDGNNTI-QEILIPASKVGLVIGKGGETIKQLQERT 243
>gi|190344879|gb|EDK36648.2| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/338 (21%), Positives = 136/338 (40%), Gaps = 63/338 (18%)
Query: 118 QSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIII 177
Q+ S P +R+ CP ++ VIGK G+++ LRE+ A+I V++ I +ER+I +
Sbjct: 192 QAERESDPTYVSFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIISV 251
Query: 178 YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN 237
+AK A + I+EE ++E
Sbjct: 252 KGPAENVAK-------------------------AFGLITRAILEE---------PEDEP 277
Query: 238 STITAR-----LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
++I +R +L+P+ MVG ++GK G + + + A ++ P +TD ++
Sbjct: 278 ASIMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLKAAEQ----PLPNSTDRVL 333
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSW 352
+ G + A+Y +S ++ ++ K G + + + GN+
Sbjct: 334 SVLGVGDAIHIAIYYISQVIIEHKDILKKHKIVYYTPGNNQLMNNTMGLIPNNTYGNTGI 393
Query: 353 PARNSSLHGMP-------------------STPW-MGGYGDQPSRMGSGSINSCPPGQMG 392
+ G P +TP Y D+ G + + P G
Sbjct: 394 IGNDPIQGGAPFQHNYQRQFQPSAPSHNQITTPVPTQSYTDEHGNTMIGDVITSVPVPAG 453
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGAS 430
+ +FS + + IG VIGKGG N+KQ+++ +G S
Sbjct: 454 TGTDKFSEDVFVANTNIGSVIGKGGNNIKQIRESSGCS 491
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 7/147 (4%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNP 456
S ++ C + VIGK G + L+++ A I V + D ER+I E +
Sbjct: 202 VSFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIISVKGPAENVAKA 261
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
AIL+ ++L+P VG I+G+GG E+ + A ++
Sbjct: 262 FGLITRAILEEPEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLKAA 321
Query: 517 GARVKLQDPHPGSSECIVDIRGSSEHL 543
+ P P S++ ++ + G + +
Sbjct: 322 ------EQPLPNSTDRVLSVLGVGDAI 342
>gi|345486914|ref|XP_001607400.2| PREDICTED: poly(rC)-binding protein 3-like [Nasonia vitripennis]
Length = 476
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 93/341 (27%), Positives = 151/341 (44%), Gaps = 49/341 (14%)
Query: 122 NSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYS 179
N P+ T+ R++ +++G +IGK G IVK REE+ AKI ++D GS ER++ +
Sbjct: 13 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTG 69
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
I K A + E C+ + HD I+
Sbjct: 70 PTNSIFK--------AFTLICKKFEEWCS------QFHD--IQGGGN--AGGGGGVPRPP 111
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
IT RL+VP + G L+GK G I+ +R TGA+I+V ++ LP +T+ V ISG
Sbjct: 112 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTISGTSE 167
Query: 300 VAKRALYEVSTLLHQNPRKD-------KPPSSFP------QAYGGQNFHSPPAPMADMHP 346
+ +Y + ++ ++P K KP P QA+ Q ++ PA +DM
Sbjct: 168 AITQCIYHICCVMLESPPKGATIPYRPKPQVGGPVILAGGQAFTIQGNYAVPA-HSDMGK 226
Query: 347 LGNSSWPARNSSLHGMPSTPW-MGGYGDQPSRMGSGS-INSCPPGQMGEVSAEFSMKILC 404
LG+S + G + P GG +GS + + + + + ++
Sbjct: 227 LGSSPLAGLAALGLGGLAAPANTGGLNPAALAALAGSQLRTNNANRQQPAANNQTHEMTV 286
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHV------EDAPTD 439
IG +IGKGG + +++Q +GA I + E PTD
Sbjct: 287 PNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGPTD 327
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 78/167 (46%), Gaps = 32/167 (19%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G VK+ ++E+GA I++ D ER++ +
Sbjct: 17 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG----- 69
Query: 455 NPRSQTIDAILQLQNKTSEFSE------------------KGTITTRLLVPSSKVGCILG 496
P + A + K E+ + IT RL+VP+S+ G ++G
Sbjct: 70 -PTNSIFKAFTLICKKFEEWCSQFHDIQGGGNAGGGGGVPRPPITLRLIVPASQCGSLIG 128
Query: 497 QGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+GG I E+R T A I+V + P S+E V I G+SE +
Sbjct: 129 KGGSKIKEIREVTGASIQVASEML------PNSTERAVTISGTSEAI 169
>gi|147901405|ref|NP_001084264.1| poly(rC) binding protein 2 [Xenopus laevis]
gi|5459450|emb|CAB50743.1| hnRNP-E2 protein [Xenopus laevis]
Length = 353
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 142/345 (41%), Gaps = 70/345 (20%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
+A+ K II EED+ M + + +T RL+V
Sbjct: 66 ---------------------NAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS--- 357
++ ++ ++P K +P PSS P + G + A H W R S
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQV----SRQAGGHACETDLWEGRRSHTG 216
Query: 358 -------SLHGM-----------PSTPWMGGYGDQPSRM-GSGSINSCPPGQMGEVSAEF 398
LHG P + Q S S S N+ G + +
Sbjct: 217 GVSLDAVDLHGAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQTT 276
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
S ++ IG +IG+ G + +++Q +GA I + + S++R
Sbjct: 277 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDR 321
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S ID + + + N T+ S K +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFSMIIDKLEEDISSSMTNSTA--SSKPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 106/266 (39%), Gaps = 72/266 (27%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--------- 163
+SS S +S+P T+ R++ P+ + G +IGK G +K +RE T A++ V
Sbjct: 84 SSSMTNSTASSKPPVTL-RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST 142
Query: 164 --ADTIPGSEERVI-------------------IIY-----SSPTKIAKTQ--NKDDDSA 195
A TI G + +I I Y SSP A Q + A
Sbjct: 143 ERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQAGGHA 202
Query: 196 AET-------------KKESMEPHCAA---------QDALLKVHDRIIEEDLF------- 226
ET ++++ H A Q L K+H +++ F
Sbjct: 203 CETDLWEGRRSHTGGVSLDAVDLHGAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGN 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
G + D T + L +PN+++GC++G++G I +R +GA I++ P
Sbjct: 263 TGFSGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI-----ANPVEG 317
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLL 312
+ D V I+G A Y ++ L
Sbjct: 318 SNDRQVTITGSTASISLAQYLINVRL 343
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 275 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSNDRQVTITG 327
Query: 539 SSEHL 543
S+ +
Sbjct: 328 STASI 332
>gi|148226696|ref|NP_001080123.1| poly(rC) binding protein 3 [Xenopus laevis]
gi|27370875|gb|AAH41241.1| Pcbp2b protein [Xenopus laevis]
Length = 353
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 142/345 (41%), Gaps = 70/345 (20%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
+A+ K II EED+ M + + +T RL+V
Sbjct: 66 ---------------------NAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS--- 357
++ ++ ++P K +P PSS P + G + A H W R S
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQV----SRQAGGHACETDLWEGRRSHTG 216
Query: 358 -------SLHGM-----------PSTPWMGGYGDQPSRM-GSGSINSCPPGQMGEVSAEF 398
LHG P + Q S S S N+ G + +
Sbjct: 217 GVSLDAVDLHGAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQAT 276
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
S ++ IG +IG+ G + +++Q +GA I + + S++R
Sbjct: 277 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDR 321
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S ID + + + N T+ S K +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFSMIIDKLEEDISSSMTNSTA--SSKPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 46.6 bits (109), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 63/266 (23%), Positives = 105/266 (39%), Gaps = 72/266 (27%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--------- 163
+SS S +S+P T+ R++ P+ + G +IGK G +K +RE T A++ V
Sbjct: 84 SSSMTNSTASSKPPVTL-RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST 142
Query: 164 --ADTIPGSEERVI-------------------IIY-----SSPTKIAKTQ--NKDDDSA 195
A TI G + +I I Y SSP A Q + A
Sbjct: 143 ERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQAGGHA 202
Query: 196 AET-------------KKESMEPHCAA---------QDALLKVHDRIIEEDLF------- 226
ET ++++ H A Q L K+H +++ F
Sbjct: 203 CETDLWEGRRSHTGGVSLDAVDLHGAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGN 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
G + D + L +PN+++GC++G++G I +R +GA I++ P
Sbjct: 263 TGFSGGIDASAQATSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI-----ANPVEG 317
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLL 312
+ D V I+G A Y ++ L
Sbjct: 318 SNDRQVTITGSTASISLAQYLINVRL 343
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
Score = 39.7 bits (91), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEH 542
L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS+
Sbjct: 279 ELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSNDRQVTITGSTAS 331
Query: 543 L 543
+
Sbjct: 332 I 332
>gi|334350025|ref|XP_003342306.1| PREDICTED: poly(rC)-binding protein 2-like [Monodelphis domestica]
gi|444513888|gb|ELV10473.1| Poly(rC)-binding protein 2 [Tupaia chinensis]
Length = 307
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 143/333 (42%), Gaps = 81/333 (24%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
+A+ K II EED+ M + +T RL+V
Sbjct: 66 ---------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLG--NSS 351
++ ++ ++P K +P PSS P QAY Q ++ P P + +H L S
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSH 220
Query: 352 WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAE-FSMKILCSAGKIG 410
+P HG +T + G + SA+ S ++ IG
Sbjct: 221 FPMT----HG--NTGFSAGL---------------------DASAQTTSHELTIPNDLIG 253
Query: 411 GVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+IG+ G + +++Q +GA I + + S +R
Sbjct: 254 CIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 286
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 37/247 (14%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETK----------KESM 203
E T A++ VA D +P S ER I I P I + + E+ K S
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSS 184
Query: 204 EP--------------HCAAQDALLKVHDRIIEEDLF------GGMASDDDNENSTITAR 243
P + Q L K+H +++ F G ++ D T +
Sbjct: 185 SPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHE 244
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
L +PN+++GC++G++G I +R +GA I++ P +TD V I+G
Sbjct: 245 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI-----ANPVEGSTDRQVTITGSAASISL 299
Query: 304 ALYEVST 310
A Y ++
Sbjct: 300 AQYLINV 306
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 240 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 292
Query: 539 SSEHL 543
S+ +
Sbjct: 293 SAASI 297
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|363747267|ref|XP_423701.3| PREDICTED: poly(rC)-binding protein 2-like isoform 4 [Gallus
gallus]
Length = 307
Score = 73.2 bits (178), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 143/333 (42%), Gaps = 81/333 (24%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
+A+ K II EED+ M + +T RL+V
Sbjct: 66 ---------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLG--NSS 351
++ ++ ++P K +P PSS P QAY Q ++ P P + +H L S
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSH 220
Query: 352 WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAE-FSMKILCSAGKIG 410
+P HG +T + G + SA+ S ++ IG
Sbjct: 221 FPMS----HG--NTGFSAGL---------------------DASAQTTSHELTIPNDLIG 253
Query: 411 GVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+IG+ G + +++Q +GA I + + S +R
Sbjct: 254 CIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 286
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 107/247 (43%), Gaps = 37/247 (14%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETK----------KESM 203
E T A++ VA D +P S ER I I P I + + E+ K S
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSS 184
Query: 204 EP--------------HCAAQDALLKVHDRIIEEDLF------GGMASDDDNENSTITAR 243
P + Q L K+H +++ F G ++ D T +
Sbjct: 185 SPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHGNTGFSAGLDASAQTTSHE 244
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
L +PN+++GC++G++G I +R +GA I++ P +TD V I+G
Sbjct: 245 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI-----ANPVEGSTDRQVTITGSAASISL 299
Query: 304 ALYEVST 310
A Y ++
Sbjct: 300 AQYLINV 306
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 240 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 292
Query: 539 SSEHL 543
S+ +
Sbjct: 293 SAASI 297
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|54037961|gb|AAH84195.1| Pcbp2 protein [Xenopus laevis]
Length = 353
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 142/345 (41%), Gaps = 70/345 (20%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
+A+ K II EED+ M + + +T RL+V
Sbjct: 66 ---------------------NAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS--- 357
++ ++ ++P K +P PSS P + G + A H W R S
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQV----SRQAGGHACETDLWEGRRSHTG 216
Query: 358 -------SLHGM-----------PSTPWMGGYGDQPSRM-GSGSINSCPPGQMGEVSAEF 398
LHG P + Q S S S N+ G + +
Sbjct: 217 GVSLDAVDLHGAYIIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQTT 276
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
S ++ IG +IG+ G + +++Q +GA I + + S++R
Sbjct: 277 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDR 321
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S ID + + + N T+ S K +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFSMIIDKLEEDISSSMTNSTA--SSKPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 106/266 (39%), Gaps = 72/266 (27%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--------- 163
+SS S +S+P T+ R++ P+ + G +IGK G +K +RE T A++ V
Sbjct: 84 SSSMTNSTASSKPPVTL-RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST 142
Query: 164 --ADTIPGSEERVI-------------------IIY-----SSPTKIAKTQ--NKDDDSA 195
A TI G + +I I Y SSP A Q + A
Sbjct: 143 ERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQAGGHA 202
Query: 196 AET-------------KKESMEPHCAA---------QDALLKVHDRIIEEDLF------- 226
ET ++++ H A Q L K+H +++ F
Sbjct: 203 CETDLWEGRRSHTGGVSLDAVDLHGAYIIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGN 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
G + D T + L +PN+++GC++G++G I +R +GA I++ P
Sbjct: 263 TGFSGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI-----ANPVEG 317
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLL 312
+ D V I+G A Y ++ L
Sbjct: 318 SNDRQVTITGSTASISLAQYLINVRL 343
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 275 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSNDRQVTITG 327
Query: 539 SSEHL 543
S+ +
Sbjct: 328 STASI 332
>gi|53749712|ref|NP_001005451.1| poly(rC) binding protein 3 [Xenopus (Silurana) tropicalis]
gi|49250542|gb|AAH74565.1| poly(rC) binding protein 2 [Xenopus (Silurana) tropicalis]
gi|89266917|emb|CAJ82240.1| novel protein similar to poly(rC) binding protein 2 [Xenopus
(Silurana) tropicalis]
Length = 353
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 85/345 (24%), Positives = 142/345 (41%), Gaps = 70/345 (20%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
+A+ K II EED+ M + + +T RL+V
Sbjct: 66 ---------------------NAIFKAFSMIIDKLEEDISSSMTNSTASSKPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS--- 357
++ ++ ++P K +P PSS P + G + A H W R S
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQV----SRQAGGHACETDLWEGRRSHTG 216
Query: 358 -------SLHGM-----------PSTPWMGGYGDQPSRM-GSGSINSCPPGQMGEVSAEF 398
LHG P + Q S S S N+ G + +
Sbjct: 217 GVSLDAVDLHGAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQTT 276
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
S ++ IG +IG+ G + +++Q +GA I + + S++R
Sbjct: 277 SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDR 321
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ S ID + + + N T+ S K +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFSMIIDKLEEDISSSMTNSTA--SSKPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 64/266 (24%), Positives = 106/266 (39%), Gaps = 72/266 (27%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--------- 163
+SS S +S+P T+ R++ P+ + G +IGK G +K +RE T A++ V
Sbjct: 84 SSSMTNSTASSKPPVTL-RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST 142
Query: 164 --ADTIPGSEERVI-------------------IIY-----SSPTKIAKTQ--NKDDDSA 195
A TI G + +I I Y SSP A Q + A
Sbjct: 143 ERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQVSRQAGGHA 202
Query: 196 AET-------------KKESMEPHCAA---------QDALLKVHDRIIEEDLF------- 226
ET ++++ H A Q L K+H +++ F
Sbjct: 203 CETDLWEGRRSHTGGVSLDAVDLHGAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGN 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
G + D T + L +PN+++GC++G++G I +R +GA I++ P
Sbjct: 263 TGFSGGIDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI-----ANPVEG 317
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLL 312
+ D V I+G A Y ++ L
Sbjct: 318 SNDRQVTITGSTASISLAQYLINVRL 343
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 275 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSNDRQVTITG 327
Query: 539 SSEHL 543
S+ +
Sbjct: 328 STASI 332
>gi|334311844|ref|XP_001369630.2| PREDICTED: far upstream element-binding protein 3 [Monodelphis
domestica]
Length = 574
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 139/332 (41%), Gaps = 88/332 (26%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAK-ITVADT-IPGSEERVIIIYSSPTKI 184
+T+ IL P+ K+G VIGK G +K L+E T K I + D +P ++ + I P K+
Sbjct: 164 NTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDPFKV 223
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL--FGGMASDDDNENSTITA 242
+ A++ +L++ I E+D F G+ SD + +
Sbjct: 224 QQ----------------------AREMVLEI---IREKDQADFRGVRSDFSSRMGGGSI 258
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
+ VP VG ++G+ G++I++++++ G I+ P D + P + + Q+ G P +
Sbjct: 259 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERVAQVMGLPERCQ 313
Query: 303 RALYEVSTLLHQNPRKDKPPS-SFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHG 361
A + +S L+ +D S S P+ G G S W
Sbjct: 314 HAAHVISDLILTAQERDGFGSLSVPRGRG----------------RGRSDW--------- 348
Query: 362 MPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVK 421
SI + PG + EV+ A K G VIGKGG N+K
Sbjct: 349 --------------------SIGA--PGGLQEVT------YTVPADKCGLVIGKGGENIK 380
Query: 422 QLQQETGASIHVEDAPTDSDERVIRASAFEGL 453
+ Q++GA + ++ P + + +R G+
Sbjct: 381 SINQQSGAHVELQRNPPPNTDPSVRIFTIRGV 412
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 98/432 (22%), Positives = 166/432 (38%), Gaps = 123/432 (28%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 86 VPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLTGTP------------ 133
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR F +D + N+TI +L+P + VG
Sbjct: 134 -------ESIE---QAKRLLGQIVDRCRNGPGF----HNDVDGNNTIQ-EILIPASKVGL 178
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G P ++A V ++
Sbjct: 179 VIGKGGETIKQLQERTGVKMIMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIR 235
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G D
Sbjct: 236 EKDQAD-----------------------------------------------FRGVRSD 248
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SRMG GSI P F++ I VIG+ G +K++Q + G I
Sbjct: 249 FSSRMGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 291
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTI-DAILQLQNKT---------------SEFS-- 475
+ S ERV + + I D IL Q + S++S
Sbjct: 292 KPDDGISPERVAQVMGLPERCQHAAHVISDLILTAQERDGFGSLSVPRGRGRGRSDWSIG 351
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ-DPHPGS--SE 531
G VP+ K G ++G+GG I + +++ GA V+LQ +P P + S
Sbjct: 352 APGGLQEVTYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPNTDPSV 404
Query: 532 CIVDIRGSSEHL 543
I IRG + +
Sbjct: 405 RIFTIRGVPQQI 416
Score = 46.6 bits (109), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 16/175 (9%)
Query: 339 APMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF 398
A + D P N+S P + S++G YG Q + G N G + A
Sbjct: 32 AKIGDAIPHLNNSTPLVDPSVYG---------YGVQKRPLDDGVGNQL--GALVHQRAVI 80
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER--VIRAS--AFEGLW 454
+ + +G +IG+GG + ++Q E+G I + + ER V+ + + E
Sbjct: 81 TEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQIAPESSGIPERPCVLTGTPESIEQAK 140
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
Q +D ++ TI +L+P+SKVG ++G+GG I +++ RT
Sbjct: 141 RLLGQIVDRCRNGPGFHNDVDGNNTI-QEILIPASKVGLVIGKGGETIKQLQERT 194
>gi|332023471|gb|EGI63714.1| Far upstream element-binding protein 1 [Acromyrmex echinatior]
Length = 731
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 126/304 (41%), Gaps = 51/304 (16%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE-ERVIIIYSSPTKIAKTQNK 190
I+ P K+G +IGK G +K L+E++ AK+ V P E E+ + I P K+ +
Sbjct: 198 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQL 257
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ AE KE H + A + + + G A+ D E +LVP
Sbjct: 258 VYELIAE--KEIQMFHRGGRGATDRTGNYSNDSGFNHGPANSDGVE-------VLVPRAA 308
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
VG ++GK GD+I+++++E+GA ++ P D +SGK ++A +
Sbjct: 309 VGVVIGKGGDMIKKIQAESGAKVQFQQGREEGPG----DRKCLLSGKHQAVEQARQRIQE 364
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGG 370
L+ R+D ++ GG+ P GN RN +
Sbjct: 365 LIDSVMRRDDGRNNM----GGRG----------SGPRGNGFGGNRNPNE----------- 399
Query: 371 YGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGAS 430
YG R G G + + + K G +IGKGG +KQ+ Q+TGA
Sbjct: 400 YGTWDRRQG------------GPMQDKIETTFTVPSSKCGIIIGKGGETIKQINQQTGAH 447
Query: 431 IHVE 434
++
Sbjct: 448 CELD 451
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 113/557 (20%), Positives = 205/557 (36%), Gaps = 137/557 (24%)
Query: 103 VVGIKKGNWSNSSREQSFGNSQPADTV-------YRILCPSRKIGGVIGKAGNIVKSLRE 155
++GI+ G NS + S ++P + I P + +G +IG+ G + L+
Sbjct: 69 LIGIRGGPAGNSIGDSSGQGARPPSSNPLCSMCNEDIRVPDKMVGLIIGRGGEQITRLQT 128
Query: 156 ETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLK 215
ET KI +A G ERV + S + + A++ +L
Sbjct: 129 ETGCKIQMAPESGGLPERVCTLTGSREAVNR----------------------AKELVLS 166
Query: 216 VHDRIIEEDLFGGMASDDDNENSTIT---ARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
+ ++ + G M +++P VG ++GK G+ I++L+ ++GA
Sbjct: 167 IVNQRSRSEGIGDMNMSGSGSGMMGHPGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAK 226
Query: 273 IRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQ 332
+ V+ + ++ ++I+G P + A V L+ + Q
Sbjct: 227 MVVIQEG----PSQEQEKPLRITGDPQKVEYAKQLVYELIAEKEI--------------Q 268
Query: 333 NFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMG 392
FH G +T G Y + S G NS
Sbjct: 269 MFHR-----------------------GGRGATDRTGNYSND-SGFNHGPANSD------ 298
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS--DERVIRASAF 450
+++L +G VIGKGG +K++Q E+GA + + + D + + +
Sbjct: 299 ------GVEVLVPRAAVGVVIGKGGDMIKKIQAESGAKVQFQQGREEGPGDRKCLLSGKH 352
Query: 451 EGLWNPRS---QTIDAILQLQNKTSEFSEKGT---------------------------- 479
+ + R + ID++++ + + +G+
Sbjct: 353 QAVEQARQRIQELIDSVMRRDDGRNNMGGRGSGPRGNGFGGNRNPNEYGTWDRRQGGPMQ 412
Query: 480 --ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKL-QDPHPGSSECIVDI 536
I T VPSSK G I+G+GG I ++ ++T GA +L + +E I I
Sbjct: 413 DKIETTFTVPSSKCGIIIGKGGETIKQINQQT-------GAHCELDRRNQSNENEKIFII 465
Query: 537 RGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSP 596
RG+ E + A + + G + SSY Q + + + YQ Q
Sbjct: 466 RGNPEQVEHAKRIFSEKLGMGPAG----SSY---TAAQGAVGYNPNWNTGYQAWPNQPQS 518
Query: 597 YHRVNAQQSPYQNINPQ 613
N Q+P Q +NPQ
Sbjct: 519 TDGNNPNQAPVQ-VNPQ 534
Score = 43.5 bits (101), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/147 (25%), Positives = 65/147 (44%), Gaps = 23/147 (15%)
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR--- 243
QN D ++S EP +L V D +I + GG A + ++S AR
Sbjct: 38 AQNNQDSKLKRPLEDSSEPEAKKMASL--VADPLI--GIRGGPAGNSIGDSSGQGARPPS 93
Query: 244 -----------LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
+ VP+ MVG ++G+ G+ I RL++ETG I++ P P + +
Sbjct: 94 SNPLCSMCNEDIRVPDKMVGLIIGRGGEQITRLQTETGCKIQMAPESGGLP-----ERVC 148
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKD 319
++G RA V ++++Q R +
Sbjct: 149 TLTGSREAVNRAKELVLSIVNQRSRSE 175
>gi|328783034|ref|XP_624673.3| PREDICTED: far upstream element-binding protein 1-like [Apis
mellifera]
Length = 735
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 126/308 (40%), Gaps = 61/308 (19%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE-ERVIIIYSSPTKIAKTQNK 190
I+ P K+G +IGK G +K L+E++ AK+ V P E E+ + I P K+ +
Sbjct: 202 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQL 261
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN----STITARLLV 246
+ AE KE H ++ + DR G S+D N N +T +LV
Sbjct: 262 VYELIAE--KEMQMFHRGSRGS-----DR-------SGNYSNDSNFNHGSGTTDGVEVLV 307
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P VG ++GK GD+I+++++ETGA ++ P D +SGK ++
Sbjct: 308 PRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPG----DRKCIVSGKHQAVEQVRQ 363
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTP 366
+ L+ R+D S+ G P GN RN +
Sbjct: 364 RIQELIDSVMRRDDGRSNMGTRSG---------------PRGNGFSNNRNPNE------- 401
Query: 367 WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQE 426
YG R G G + + + K G +IGKGG +KQ+ Q+
Sbjct: 402 ----YGGWDRRQG------------GPMQDKIETTFTVPSSKCGIIIGKGGETIKQINQQ 445
Query: 427 TGASIHVE 434
TGA ++
Sbjct: 446 TGAHCELD 453
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 80/159 (50%), Gaps = 31/159 (19%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGAS-IHVEDAPTDSDERVIRASA--------- 449
++I+ K+G +IGKGG +KQLQ+++GA + +++ P+ E+ +R +
Sbjct: 200 VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAK 259
Query: 450 ---FEGLWNPRSQTIDAILQLQNKTSEFSEK-----GTITT---RLLVPSSKVGCILGQG 498
+E + Q + +++ +S G+ TT +LVP + VG ++G+G
Sbjct: 260 QLVYELIAEKEMQMFHRGSRGSDRSGNYSNDSNFNHGSGTTDGVEVLVPRAAVGVVIGKG 319
Query: 499 GHVINEMRRRTQADIRVVGARVKLQ---DPHPGSSECIV 534
G +I +++ T GARV+ Q + PG +CIV
Sbjct: 320 GDMIKKIQAET-------GARVQFQQGREDGPGDRKCIV 351
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 12/118 (10%)
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVEDAP---------TDSDERVIRASAFE-GLWNPRS 458
+G +IG+GG + +LQ ETG I + T S E V RA + N RS
Sbjct: 119 VGLIIGRGGEQITRLQSETGCKIQMASESGLPERVCTLTGSREAVNRAKELVLSIVNQRS 178
Query: 459 QTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+T + G + +++P KVG I+G+GG I +++ ++ A + V+
Sbjct: 179 RTEGIGDMSGSSGGMMGHPGFV--EIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVI 234
Score = 45.4 bits (106), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ VP+NMVG ++G+ G+ I RL+SETG I++ LP + + ++G R
Sbjct: 112 IRVPDNMVGLIIGRGGEQITRLQSETGCKIQMASESGLP------ERVCTLTGSREAVNR 165
Query: 304 ALYEVSTLLHQNPRKD 319
A V ++++Q R +
Sbjct: 166 AKELVLSIVNQRSRTE 181
>gi|193083114|ref|NP_001122386.1| poly(rC)-binding protein 2 isoform g [Homo sapiens]
gi|73996231|ref|XP_857798.1| PREDICTED: poly(rC)-binding protein 2 isoform 15 [Canis lupus
familiaris]
gi|291389261|ref|XP_002711067.1| PREDICTED: poly(rC) binding protein 2-like isoform 4 [Oryctolagus
cuniculus]
gi|338726296|ref|XP_003365293.1| PREDICTED: poly(rC)-binding protein 2 [Equus caballus]
gi|426224374|ref|XP_004006346.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Ovis aries]
gi|119617117|gb|EAW96711.1| poly(rC) binding protein 2, isoform CRA_f [Homo sapiens]
Length = 318
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 85/333 (25%), Positives = 143/333 (42%), Gaps = 81/333 (24%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
+A+ K II EED+ M + +T RL+V
Sbjct: 66 ---------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLG--NSS 351
++ ++ ++P K +P PSS P QAY Q ++ P P + +H L S
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSH 220
Query: 352 WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAE-FSMKILCSAGKIG 410
+P HG +T + G + SA+ S ++ IG
Sbjct: 221 FPMT----HG--NTGFSAGL---------------------DASAQTTSHELTIPNDLIG 253
Query: 411 GVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+IG+ G + +++Q +GA I + + S +R
Sbjct: 254 CIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 286
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 108/249 (43%), Gaps = 37/249 (14%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETK----------KESM 203
E T A++ VA D +P S ER I I P I + + E+ K S
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSS 184
Query: 204 EP--------------HCAAQDALLKVHDRIIEEDLF------GGMASDDDNENSTITAR 243
P + Q L K+H +++ F G ++ D T +
Sbjct: 185 SPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHE 244
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
L +PN+++GC++G++G I +R +GA I++ P +TD V I+G
Sbjct: 245 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI-----ANPVEGSTDRQVTITGSAASISL 299
Query: 304 ALYEVSTLL 312
A Y ++ L
Sbjct: 300 AQYLINVRL 308
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 240 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 292
Query: 539 SSEHL 543
S+ +
Sbjct: 293 SAASI 297
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|146422870|ref|XP_001487369.1| hypothetical protein PGUG_00746 [Meyerozyma guilliermondii ATCC
6260]
Length = 545
Score = 72.8 bits (177), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 81/368 (22%), Positives = 151/368 (41%), Gaps = 66/368 (17%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +R+ CP ++ VIGK G+++ LRE+ A+I V++ I +ER+I++ +
Sbjct: 199 PTYVSFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIILVKGPAENV 258
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR- 243
AK A + I+EE ++E ++I +R
Sbjct: 259 AK-------------------------AFGLITRAILEE---------PEDEPASIMSRQ 284
Query: 244 ----LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+L+P+ MVG ++GK G + + + A ++ A++ P +TD ++ + G +
Sbjct: 285 YNLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLKA--AEQ--PLPNSTDRVLSVLGVGD 340
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
A+Y +S ++ ++ K G + + + GN+ +
Sbjct: 341 AIHIAIYYISQVIIEHKDILKKHKIVYYTPGNNQLMNNTMGLIPNNTYGNTGIIGNDPIQ 400
Query: 360 HGMP-------------------STPW-MGGYGDQPSRMGSGSINSCPPGQMGEVSAEFS 399
G P +TP Y D+ G + + P G + +FS
Sbjct: 401 GGAPFQHNYQRQFQPSAPSHNQITTPVPTQLYTDEHGNTMIGDVITSVPVPAGTGTDKFS 460
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+ + IG VIGKGG N+KQ+++ +G S +V+ P + I GL + R
Sbjct: 461 EDVFVANTNIGSVIGKGGNNIKQIRESSGCS-YVKIEP--DQHQTIMLGRGRGLTSIRKL 517
Query: 460 TIDAILQL 467
T+ + L
Sbjct: 518 TLTGSINL 525
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 61/147 (41%), Gaps = 7/147 (4%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNP 456
S ++ C + VIGK G + L+++ A I V + D ER+I E +
Sbjct: 202 VSFRMYCPVKEASFVIGKRGDMINHLREKANARIQVSENIKDVQERIILVKGPAENVAKA 261
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
AIL+ ++L+P VG I+G+GG E+ + A ++
Sbjct: 262 FGLITRAILEEPEDEPASIMSRQYNLKVLIPHPMVGYIIGKGGSKFREIEENSAAKLKAA 321
Query: 517 GARVKLQDPHPGSSECIVDIRGSSEHL 543
+ P P S++ ++ + G + +
Sbjct: 322 ------EQPLPNSTDRVLSVLGVGDAI 342
>gi|148232337|ref|NP_001090834.1| far upstream element (FUSE) binding protein 3 [Xenopus (Silurana)
tropicalis]
gi|134023819|gb|AAI35377.1| fubp3 protein [Xenopus (Silurana) tropicalis]
Length = 546
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 78/330 (23%), Positives = 136/330 (41%), Gaps = 86/330 (26%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAK-ITVADT-IPGSEERVIIIYSSPTKIA 185
TV IL P+ K+G VIGK G +K L+E T K I + D +P ++ + I P K+
Sbjct: 164 TVQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGDPFKVQ 223
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL--FGGMASDDDNENSTITAR 243
+ A+D +L++ I E+D F G+ SD + +
Sbjct: 224 Q----------------------ARDLVLEI---IREKDQADFRGIRSDFSSRIGGGSVE 258
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P++ +
Sbjct: 259 VSVPRFAVGIIIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMGLPDLCQH 313
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
A + ++ L+ +D +G +A G S
Sbjct: 314 AAHIINELILTAQERD--------GFGA---------LALARGRGRS------------- 343
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
G N PG M E++ A K G VIGKGG N+K +
Sbjct: 344 ----------------RGDWNLSTPGSMQEIT------YTVPADKCGLVIGKGGENIKNI 381
Query: 424 QQETGASIHVEDAPTDSDERVIRASAFEGL 453
Q++GA + ++ P + + +R G+
Sbjct: 382 NQQSGAHVELQRNPPPNTDPGVRIFTIRGV 411
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 162/432 (37%), Gaps = 123/432 (28%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 85 VPDKMVGFIIGRGGEQISRIQTESGCKIQIAPDSGGMPERPCVLTGTP------------ 132
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR F +D + NST+ +L+P + VG
Sbjct: 133 -------ESIE---QAKRLLGQIVDRCRNGPGF----HNDMDGNSTVQ-EILIPASKVGL 177
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G P ++A V ++
Sbjct: 178 VIGKGGETIKQLQERTGVKMIMIQDGPLPTGA---DKPLRITGDPFKVQQARDLVLEIIR 234
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D G+ S D
Sbjct: 235 EKDQAD---------------------------------------FRGIRS--------D 247
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SR+G GS+ P F++ I +IG+ G +K++Q + G I
Sbjct: 248 FSSRIGGGSVEVSVP--------RFAVGI---------IIGRNGEMIKKIQNDAGVRIQF 290
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTR---------- 483
+ S ER + L + I+ ++ + F R
Sbjct: 291 KPDDGISPERAAQVMGLPDLCQHAAHIINELILTAQERDGFGALALARGRGRSRGDWNLS 350
Query: 484 ---------LLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ-DPHPGSSEC- 532
VP+ K G ++G+GG I + +++ GA V+LQ +P P +
Sbjct: 351 TPGSMQEITYTVPADKCGLVIGKGGENIKNINQQS-------GAHVELQRNPPPNTDPGV 403
Query: 533 -IVDIRGSSEHL 543
I IRG + +
Sbjct: 404 RIFTIRGVPQQI 415
>gi|332215033|ref|XP_003256641.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 4 [Nomascus leucogenys]
gi|397470079|ref|XP_003806661.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Pan paniscus]
gi|179479950|gb|ACB86627.1| insulin-like 2 growth factor 2-binding protein 2 [Homo sapiens]
Length = 493
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 162/414 (39%), Gaps = 96/414 (23%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 111 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 170
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 171 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 199
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 200 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 256
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N HS + ++P
Sbjct: 257 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNTHS--GYFSSLYP 305
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
H P Y +Q +N P Q
Sbjct: 306 H------------HQFGPFPHHHSYPEQEI------VNLFIPTQA--------------- 332
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
+G +IGK G ++KQL + GASI + + P S+ VI E + + + +
Sbjct: 333 --VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKL 390
Query: 465 LQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 391 -----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 439
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/214 (23%), Positives = 88/214 (41%), Gaps = 43/214 (20%)
Query: 104 VGIKKGNWSNSSREQSFG-----NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQ 158
V G +S+ FG +S P + + P++ +G +IGK G +K L
Sbjct: 293 VNTHSGYFSSLYPHHQFGPFPHHHSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAG 352
Query: 159 AKITVADTI-PGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVH 217
A I +A P ER++II P K Q + +
Sbjct: 353 ASIKIAPAEGPDVSERMVIITGPPEAQFKAQGR-------------------------IF 387
Query: 218 DRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLP 277
++ EE+ F + E + A + VP++ G ++GK G + L++ T A + ++P
Sbjct: 388 GKLKEENFF------NPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVP 440
Query: 278 ADRLPPCAMNTDEMVQISG---KPNVAKRALYEV 308
D+ P N + +V+I G A+R + E+
Sbjct: 441 RDQTPD--ENEEVIVRIIGHFFASQTAQRKIREI 472
Score = 42.7 bits (99), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 100 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 155
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 156 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 212
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 213 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 268
Query: 541 EHLISA 546
E SA
Sbjct: 269 EACASA 274
>gi|348517827|ref|XP_003446434.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Oreochromis niloticus]
Length = 601
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 87/396 (21%), Positives = 163/396 (41%), Gaps = 73/396 (18%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKI 184
AD R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I I+S+P
Sbjct: 198 ADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKPISIHSTPEG- 256
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
C+A A + D + +E + D + ++
Sbjct: 257 ----------------------CSA--ACRMILDIMHQE-------AKDTKTADEVPLKI 285
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
+ NN VG L+GK G ++++ +T I + P L N + + + G +A
Sbjct: 286 MAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIEACCQA 343
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPS 364
E+ + + ++ N + P ++ LG L S
Sbjct: 344 EVEIMKKVRE---------AYENDIAAMNQQTHLIPGLNLGALG----------LFPSSS 384
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQ 424
G+ ++ P G G E ++ + A +G +IGK G ++KQL
Sbjct: 385 NMPPPPPGN--------AVGGTPYGCFGAPEQE-TVHVYIPAQAVGAIIGKKGQHIKQLS 435
Query: 425 QETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EKGT 479
+ GASI + AP +S + +R G P A ++ K E + E+
Sbjct: 436 RFAGASIKI--APAESPDSKMRMVIVTG---PPEAQFKAQGRIYGKLKEENFFGPKEEVK 490
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ T + + ++ G ++G+GG +NE++ T A++ V
Sbjct: 491 LETHIKMAAAAAGRVIGKGGKTVNELQNLTAAEVVV 526
>gi|326496260|dbj|BAJ94592.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 689
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 123/288 (42%), Gaps = 45/288 (15%)
Query: 113 NSSREQSFGNS-QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIP 168
NS + S+G Q T +I P+ ++G +IGKAG +K L+ ++ AKI V D P
Sbjct: 127 NSHQYSSYGGGYQSGSTTKKIDIPNGRVGVIIGKAGETIKHLQAQSGAKIQVTRDMDVQP 186
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
GS+ R + I +P +I++ + D AE S + +R G
Sbjct: 187 GSQTRSVDISGTPDQISRAEQLIIDVLAEADAGSSG----------TISNRKYNAPQPGA 236
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
++ + NN VG ++GK G+ I+ +++++ A I+V+P LPP +T
Sbjct: 237 E-----------QFQMQIANNKVGLVIGKGGETIKSMQAKSQARIQVIPL-HLPPGDTST 284
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGG--QNFHSPPAPMADMHP 346
+ + I G + A VS + +N ++ Q GG Q + PP P A+
Sbjct: 285 ERTLYIDGTAEQIEIAKQLVSEVTSENRARN-------QMSGGYSQQGYRPPRPQAN--- 334
Query: 347 LGNSSWPARNSSLHGMPSTPWM--GGYGDQPSRMGSGSINSCPPGQMG 392
W A + P +M G Y P + G S PP G
Sbjct: 335 -----WGAPGAPTTQQPGYGYMQPGAYPGAPPQYGQQPYGSYPPASGG 377
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 15/164 (9%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIRAS 448
G S + KI G++G +IGK G +K LQ ++GA I V D S R + S
Sbjct: 137 GYQSGSTTKKIDIPNGRVGVIIGKAGETIKHLQAQSGAKIQVTRDMDVQPGSQTRSVDIS 196
Query: 449 AFEGLWNPRSQTIDAILQ---------LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGG 499
+ Q I +L + N+ + G ++ + ++KVG ++G+GG
Sbjct: 197 GTPDQISRAEQLIIDVLAEADAGSSGTISNRKYNAPQPGAEQFQMQIANNKVGLVIGKGG 256
Query: 500 HVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
I M+ ++QA I+V+ + D S+E + I G++E +
Sbjct: 257 ETIKSMQAKSQARIQVIPLHLPPGD---TSTERTLYIDGTAEQI 297
>gi|55742577|ref|NP_998282.1| poly(rC)-binding protein 4 [Danio rerio]
gi|33604078|gb|AAH56323.1| Zgc:65870 [Danio rerio]
gi|41946775|gb|AAH65955.1| Zgc:65870 [Danio rerio]
Length = 442
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 90/375 (24%), Positives = 158/375 (42%), Gaps = 67/375 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +REE+ A+I +++ GS ER+I I
Sbjct: 7 LRLLMHGKEVGSIIGKKGETVKRIREESSARINISE---GSCPERIITI----------- 52
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLL 245
A + + + I +EEDL +A+ +T RL+
Sbjct: 53 ------------------TGATECVFRAFTMITIKLEEDLAALVANGTVTSKPPVTLRLV 94
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+P + G L+GK G I+ +R +TGA ++V D LP +T+ V ISG + + +
Sbjct: 95 IPASQCGSLIGKGGSKIKEIREKTGAQVQV-AGDLLPN---STERGVTISGSQDAIIQCV 150
Query: 306 YEVSTLLHQNPRKDKP----PSSFPQAY---GGQNFHSPPAPMADMHPLGN--------- 349
+ T++ ++P K PS P A G Q F + + A HPL +
Sbjct: 151 KLICTVILESPPKGATIPYRPSPAPGAVLLAGNQVFET--SEFAS-HPLFSVAQGGLDLQ 207
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSI-----NSCPPGQMGEVSAEFSMKILC 404
++ +N +G+P + + + G G I P + S S ++L
Sbjct: 208 QAYTVQNQ--YGIPHS-ELAKLHQLSMQQGLGPIAQATATQVLPAGIESSSQTASQELLI 264
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
IG +IG+ G + +++Q +GA I + + +R + + N I +
Sbjct: 265 PNDLIGSIIGRQGTKINEIRQVSGAQIKIGSQLDSTSDRHVTITGSPISINLAQYLITSC 324
Query: 465 LQLQNKTSEFSEKGT 479
L+ T++ S T
Sbjct: 325 LETAKSTAQSSSMST 339
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 87/154 (56%), Gaps = 18/154 (11%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLWNP 456
++++L ++G +IGK G VK++++E+ A I++ + ER+I + A E ++
Sbjct: 5 LTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEG--SCPERIITITGATECVF-- 60
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITT------RLLVPSSKVGCILGQGGHVINEMRRRTQ 510
R+ T+ I +L+ + GT+T+ RL++P+S+ G ++G+GG I E+R +T
Sbjct: 61 RAFTMITI-KLEEDLAALVANGTVTSKPPVTLRLVIPASQCGSLIGKGGSKIKEIREKTG 119
Query: 511 ADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
A ++V G D P S+E V I GS + +I
Sbjct: 120 AQVQVAG------DLLPNSTERGVTISGSQDAII 147
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYSS 180
S+P T+ R++ P+ + G +IGK G+ +K +RE+T A++ VA D +P S ER + I S
Sbjct: 84 TSKPPVTL-RLVIPASQCGSLIGKGGSKIKEIREKTGAQVQVAGDLLPNSTERGVTISGS 142
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++R+R E+ A I + C + ++ I+G
Sbjct: 2 NVTLTLRLLMHGKEVGSIIGKKGETVKRIREESSARINISEGS----CP---ERIITITG 54
Query: 297 KPNVAKRALYEVSTLLHQN 315
RA ++ L ++
Sbjct: 55 ATECVFRAFTMITIKLEED 73
>gi|149031922|gb|EDL86834.1| rCG50739, isoform CRA_c [Rattus norvegicus]
Length = 317
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 139/328 (42%), Gaps = 72/328 (21%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
+A+ K II EED+ M + +T RL+V
Sbjct: 66 ---------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVK 160
Query: 307 EVSTLLHQNPRKD-----KP-PSSFPQAYGGQNFHSPPAPMADMHPLG--NSSWPAR--N 356
++ ++ ++P K +P PSS P + G + +H L S +P N
Sbjct: 161 QICVVMLESPPKGVTIPYRPKPSSSPVIFAG-------GQLTKLHQLAMQQSHFPMTHGN 213
Query: 357 SSLHGMP-STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGK 415
+ G+ S+P + GY + + S ++ IG +IG+
Sbjct: 214 TGFSGIESSSPEVKGYW----------------AGLDASAQTTSHELTIPNDLIGCIIGR 257
Query: 416 GGFNVKQLQQETGASIHVEDAPTDSDER 443
G + +++Q +GA I + + S +R
Sbjct: 258 QGAKINEIRQMSGAQIKIANPVEGSTDR 285
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 239 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 291
Query: 539 SSEHL 543
S+ +
Sbjct: 292 SAASI 296
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|410970837|ref|XP_003991883.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Felis catus]
Length = 493
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 163/414 (39%), Gaps = 96/414 (23%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 111 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 170
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 171 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 199
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 200 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 256
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N HS + ++P
Sbjct: 257 NPERTITVKGTVEACANAEVEIMKKLRE---------AFENDMLAVNTHS--GYFSSLYP 305
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
H P Y +Q +N P Q
Sbjct: 306 P------------HQFGPFPHHHSYPEQEI------VNLFIPTQA--------------- 332
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
+G +IGK G ++KQL + GASI + + P S+ VI E + + + +
Sbjct: 333 --VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKL 390
Query: 465 LQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 391 -----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 439
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 316 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 375
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 376 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 404
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 405 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 461
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 462 SQTAQRKIREI 472
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 100 PSPPQRAQRGDHSSR----EQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 155
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 156 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 212
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 213 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 268
Query: 541 E 541
E
Sbjct: 269 E 269
>gi|401626761|gb|EJS44683.1| pbp2p [Saccharomyces arboricola H-6]
Length = 416
Score = 72.4 bits (176), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 79/356 (22%), Positives = 144/356 (40%), Gaps = 80/356 (22%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P+ R+LC + ++G G + ++ ET A+I V++ I G ER++ + + +
Sbjct: 67 PSHVHLRMLCLVKHASLIVGHKGATISKIKSETSARINVSNNIRGVPERIVYVRGTCDDV 126
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
AK + +I L ++D E+ +T L
Sbjct: 127 AKAYS------------------------------MIVRALLEEHENEDQEEDIEVTINL 156
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L+P++++GC++GKRG ++ + + A + P L ++ D ++ ISG P+ A
Sbjct: 157 LIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL----LSNDRILTISGVPDAIHIA 212
Query: 305 LYEV-STLLH---QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
+ + TLL+ ++P+K S F Y F+S + D H N+ RN H
Sbjct: 213 TFYIGQTLLNFQMESPQKKLKRSIF---YQPTQFNS---VLID-HSQPNAILHQRNHQYH 265
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGE--------------------------- 393
P+ + G ++ + S +N PP
Sbjct: 266 --PNDKQLSGRPNRKFSVSSTFLNMAPPQYTTASVANATAFQPNFVIPNVRILDGSVVNS 323
Query: 394 -VSAEFSM-----KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+S SM +I +G VIGK G ++ +++ TG SI ++D + ER
Sbjct: 324 GISNHLSMNLVQQEIFIDENFVGNVIGKDGKHINSVKESTGCSIIIQDPVECASER 379
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 26/121 (21%), Positives = 56/121 (46%), Gaps = 2/121 (1%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEG 452
V + +++LC ++G G + +++ ET A I+V + ER++ +
Sbjct: 66 VPSHVHLRMLCLVKHASLIVGHKGATISKIKSETSARINVSNNIRGVPERIVYVRGTCDD 125
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ S + A+L+ + + +T LL+P +GCI+G+ G + E+ + A
Sbjct: 126 VAKAYSMIVRALLEEHENEDQEEDI-EVTINLLIPHHLMGCIIGKRGSRLREIEDLSAAK 184
Query: 513 I 513
+
Sbjct: 185 L 185
>gi|403286483|ref|XP_003934516.1| PREDICTED: poly(rC)-binding protein 1-like isoform 1 [Saimiri
boliviensis boliviensis]
gi|403286485|ref|XP_003934517.1| PREDICTED: poly(rC)-binding protein 1-like isoform 2 [Saimiri
boliviensis boliviensis]
Length = 376
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 99/442 (22%), Positives = 173/442 (39%), Gaps = 100/442 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK VK +REE+ A+ ++++ ER+I +
Sbjct: 17 RLLMHGKEVGSIIGKNEESVKRIREESGARFSISEG--NCPERIITLTG----------- 63
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
P CA A + +++ EED+ M + +T RL+VP
Sbjct: 64 --------------PTCAIFKAFAMMINKL-EEDINSSMTNSTAASRPPVTLRLVVPATQ 108
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
G L+GK G I+ +R TGA ++V D LP +T++ + ++ P + ++
Sbjct: 109 CGSLIGKGGCKIKEIRESTGAQVQV-SGDMLPN---STEQAITVAVVPQSVTECVQQICL 164
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGG 370
++ + + PQ G+ P PM P+ + R S G
Sbjct: 165 VMLE---------TLPQCPQGRVMPIPYQPMPASSPVTCAGGQDRGSD---------AAG 206
Query: 371 YGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGAS 430
Y +G +++C +S K+ N QQ A
Sbjct: 207 YPHATRDLGVPPLDACSTQGQHTISPLHLAKL----------------NQVARQQSHIAM 250
Query: 431 IHVEDAPTDSDERVIRASAFEGLWN--PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPS 488
+H + F G+ + P + A L +T T L +P+
Sbjct: 251 LH-------------GGTGFAGIESSSPEVKGYRASLDASTQT---------THELTIPN 288
Query: 489 SKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHG 548
+ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+ + A
Sbjct: 289 NLIGCIIGRQGVNINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSAASISLAQY 341
Query: 549 TYQSFMTSGQSMKVQPSSYQNI 570
+ + S + M SY N+
Sbjct: 342 LINARLFSEKGMGC---SYNNV 360
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 79/146 (54%), Gaps = 20/146 (13%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS----- 448
++ ++++L ++G +IGK +VK++++E+GA + + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKNEESVKRIREESGARFSISEG--NCPERIITLTGPTCA 67
Query: 449 ---AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
AF + N + I++ + N T+ + + +T RL+VP+++ G ++G+GG I E+
Sbjct: 68 IFKAFAMMINKLEEDINS--SMTNSTA--ASRPPVTLRLVVPATQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSE 531
R T A ++V G D P S+E
Sbjct: 124 RESTGAQVQVSG------DMLPNSTE 143
>gi|388582172|gb|EIM22478.1| eukaryotic type KH-domain (KH-domain type I) [Wallemia sebi CBS
633.66]
Length = 319
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 157/354 (44%), Gaps = 64/354 (18%)
Query: 122 NSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
N+ DT+ R L +++ G +IGK G V LRE T K V+ I G ERV+ I S
Sbjct: 14 NADEIDTLTLRALVSTKEAGIIIGKGGKNVADLRERTGVKAGVSKVIAGVHERVLSITGS 73
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
+ IA DA + I++ L A ++T
Sbjct: 74 TSAIA-------------------------DAFSIIAQTILDNPLNPSTAPLQSPPSATT 108
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
RLL+ +N++G ++G++G I++++ +G +R++ + L P +T+ +V++ G
Sbjct: 109 AIRLLISHNLMGTVIGRQGIKIKQIQDTSG--VRMVASKELLP--QSTERIVEVQGTVES 164
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
A+ +++ L ++ + Y G ++P P + H L NSS+ NSS+
Sbjct: 165 IHIAINDIAKCLLEDWDR----------YSGTILYTPAPP--NEHSLFNSSF--NNSSIR 210
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNV 420
+ S +P S+NS P Q +V + I + +G +IG+ G +
Sbjct: 211 SINSV-------RRPDNFNMQSLNSALP-QPRDVRTQH---ISIPSDMVGPIIGRAGSRI 259
Query: 421 KQLQQETGASIHVEDAPTD-SDERVIRASAFEGLWNPRSQTIDAIL---QLQNK 470
++++ + A I + P D + ER+ F + P + IL QL+N+
Sbjct: 260 SEIRRLSTAKIIIAKQPHDETGERL-----FTIIGTPEANEKALILLYSQLENE 308
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 77/163 (47%), Gaps = 11/163 (6%)
Query: 386 CPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
P Q + +++ L S + G +IGKGG NV L++ TG V ERV+
Sbjct: 9 APQQQNADEIDTLTLRALVSTKEAGIIIGKGGKNVADLRERTGVKAGVSKVIAGVHERVL 68
Query: 446 ----RASAFEGLWNPRSQTI-DAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGH 500
SA ++ +QTI D L + T RLL+ + +G ++G+ G
Sbjct: 69 SITGSTSAIADAFSIIAQTILDNPLNPSTAPLQSPPSATTAIRLLISHNLMGTVIGRQGI 128
Query: 501 VINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
I ++ + + +R+V ++ L P S+E IV+++G+ E +
Sbjct: 129 KIKQI--QDTSGVRMVASKELL----PQSTERIVEVQGTVESI 165
>gi|452846671|gb|EME48603.1| hypothetical protein DOTSEDRAFT_67594 [Dothistroma septosporum
NZE10]
Length = 361
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/328 (24%), Positives = 146/328 (44%), Gaps = 51/328 (15%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A R + S++ G +IGKAG V LRE+T + V+ +PG +RV+ + + T IA
Sbjct: 40 AQLTLRAIVTSKEAGVIIGKAGQNVADLREKTGVRAGVSKVVPGVHDRVLTVTGALTGIA 99
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
DA V D +++ GM N N T RLL
Sbjct: 100 -------------------------DAYGLVADSLVKGAPQMGMGGVVGNPN-THPIRLL 133
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+ +N +G ++G++G I++++ +G +R++ + P +T+ +V++ G P+ ++A+
Sbjct: 134 ISHNQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPDGIQKAV 189
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPM-ADMHPLGNSSWPARNSSLHGMPS 364
+E+ L + ++ Y G +SP + PL + P + +G P
Sbjct: 190 WEIGKCLVDDEQR---------GY-GTVLYSPAVRVQGGGPPLNGTGAPVGPGAGYGAPR 239
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPGQMG------EVSAEF-SMKILCSAGKIGGVIGKGG 417
+ G G G+ P Q G E + + I A +G +IG+GG
Sbjct: 240 SYNRTGNG--ADFTGAAPAPYSPRRQEGPLPTTNEDGEDIQTQNISIPADMVGCIIGRGG 297
Query: 418 FNVKQLQQETGASIHVEDAPTD-SDERV 444
+ ++++ +GA I + AP D + ER+
Sbjct: 298 SKISEIRKSSGARISIAKAPHDETGERM 325
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 36/152 (23%), Positives = 78/152 (51%), Gaps = 10/152 (6%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLW 454
A+ +++ + ++ + G +IGK G NV L+++TG V +RV+ + A G+
Sbjct: 40 AQLTLRAIVTSKEAGVIIGKAGQNVADLREKTGVRAGVSKVVPGVHDRVLTVTGALTGIA 99
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGTITT---RLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+ D++++ + G T RLL+ +++G I+G+ G I ++ + +
Sbjct: 100 DAYGLVADSLVKGAPQMGMGGVVGNPNTHPIRLLISHNQMGTIIGRQGLKIKQI--QDAS 157
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+R+V + L P S+E IV+++G+ + +
Sbjct: 158 GVRMVAQKEML----PQSTERIVEVQGTPDGI 185
>gi|354484184|ref|XP_003504270.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 1 [Cricetulus griseus]
gi|344239809|gb|EGV95912.1| Insulin-like growth factor 2 mRNA-binding protein 2 [Cricetulus
griseus]
Length = 530
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 98/439 (22%), Positives = 177/439 (40%), Gaps = 92/439 (20%)
Query: 106 IKKGNWSNSSREQ----SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKI 161
+++G+ +SSREQ S ++ D RIL P++ +G +IGK G +K++ ++TQ+++
Sbjct: 101 VQRGD--HSSREQGHSGSSSQTRQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRV 158
Query: 162 TV-ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI 220
+ G+ E+ + I+++P E A +L++ +
Sbjct: 159 DIHRKENSGAAEKPVTIHATP----------------------EGTSEACRMILEIMQK- 195
Query: 221 IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
++D + ++L N +VG L+GK G ++++ ETG I +
Sbjct: 196 ---------EAEDTKLAEEVPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQD 246
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEV---------STLLHQNPRKDKPPSSFPQAYG- 330
L N + + + G + A E+ + +L N + + P A G
Sbjct: 247 L--SIYNPERTITVKGTIDACANAEMEIMKKLREAFENDMLAVNQQANLIPGLNLSALGI 304
Query: 331 ---GQNFHSPPA------PMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSG 381
G + PPA P HP + S N M G + S
Sbjct: 305 FSTGLSVLPPPAGPRGVPPSVPYHPFASHSGYFPN-----MYPHHHFGPFPHHHSYPEQE 359
Query: 382 SINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTD 439
++N P Q +G +IGK G ++KQL + GASI + + P
Sbjct: 360 TVNLFIPTQA-----------------VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDV 402
Query: 440 SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILG 496
S+ VI E + + + + K F E+ + + VPSS G ++G
Sbjct: 403 SERMVIITGPPEAQFKAQGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIG 457
Query: 497 QGGHVINEMRRRTQADIRV 515
+GG +NE++ T A++ V
Sbjct: 458 KGGKTVNELQNLTSAEVIV 476
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 38/190 (20%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSSP 181
S P + P++ +G +IGK G +K L A I +A P ER++II P
Sbjct: 354 SYPEQETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP 413
Query: 182 TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
K Q + + ++ EE+ F + E +
Sbjct: 414 EAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKLE 442
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---KP 298
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 443 AHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENAEVIVRIIGHFFAS 499
Query: 299 NVAKRALYEV 308
A+R + E+
Sbjct: 500 QTAQRKIREI 509
>gi|417398902|gb|JAA46484.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 320
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/336 (24%), Positives = 141/336 (41%), Gaps = 84/336 (25%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
+A+ K II EED+ M + +T RL+V
Sbjct: 66 ---------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVK 160
Query: 307 EVSTLLHQNPRKDKP----------PSSFP------QAYGGQNFHSPPAP-MADMHPLG- 348
++ ++ + + P PSS P QAY Q ++ P P + +H L
Sbjct: 161 QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAM 220
Query: 349 -NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAG 407
S +P HG G+ S S+++ S + + ++
Sbjct: 221 QQSHFPMT----HGNT------GF--------SASLDA---------STQTTHELTIPNN 253
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
IG +IG+ G N+ +++Q +GA I + + S R
Sbjct: 254 LIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGR 289
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 37/216 (17%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKES----------- 202
E T A++ VA D +P S ER I I P I + + ET +S
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 203 -----------------MEPHCAAQDALLKVHDRIIEEDLF------GGMASDDDNENST 239
+ Q L K+H +++ F G ++ D T
Sbjct: 185 KPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSASLDASTQT 244
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
T L +PNN++GC++G++G I +R +GA I++
Sbjct: 245 -THELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI 279
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 245 THELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSA 297
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 298 ASISLAQYLINARLSSEKGM 317
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|281341187|gb|EFB16771.1| hypothetical protein PANDA_007698 [Ailuropoda melanoleuca]
Length = 323
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/350 (23%), Positives = 140/350 (40%), Gaps = 102/350 (29%)
Query: 147 GNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPH 206
G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 6 GETVKKMREESGARINISEG--NCPERIVTI-TGPT------------------------ 38
Query: 207 CAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
DA+ K I EED+ M++ +T RL+VP + G L+GK G I+
Sbjct: 39 ----DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIK 94
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKD---- 319
+R TGA ++V D LP +T+ V ISG P+ + + ++ ++ ++P K
Sbjct: 95 EIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIP 150
Query: 320 -KP-PSSFPQAYGG-----------------------------QNFHSPPAP-MADMH-- 345
+P P+S P + G Q ++ P P + +H
Sbjct: 151 YRPKPASTPVIFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQL 210
Query: 346 --------PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVS 395
PLG N ++P LH + G S +++ PP E++
Sbjct: 211 AMQQTPFPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELT 262
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+ IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 263 IPNDL--------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 304
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 24/138 (17%)
Query: 417 GFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSE--- 473
G VK++++E+GA I++ + + ER++ + P A + K E
Sbjct: 6 GETVKKMREESGARINISEG--NCPERIVT------ITGPTDAIFKAFAMIAYKFEEDII 57
Query: 474 -------FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPH 526
+ K +T RL+VP+S+ G ++G+GG I E+R T A ++V G D
Sbjct: 58 NSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEIRESTGAQVQVAG------DML 111
Query: 527 PGSSECIVDIRGSSEHLI 544
P S+E V I G+ + +I
Sbjct: 112 PNSTERAVTISGTPDAII 129
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 64/286 (22%), Positives = 109/286 (38%), Gaps = 80/286 (27%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 42 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 100
Query: 158 QAKITVAD-----------TIPGSEERVI-------------------IIY-----SSPT 182
A++ VA TI G+ + +I I Y S+P
Sbjct: 101 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 160
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDA-------------LLKVHDRIIEEDLF--- 226
A Q + D AA T S+ A L K+H +++ F
Sbjct: 161 IFAGGQVRADPLAASTANLSLLLQPPPLPAYTIQGQYAIPHPDLTKLHQLAMQQTPFPPL 220
Query: 227 -----------------------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQ 263
G +S D T L +PN+++GC++G++G I
Sbjct: 221 GQTNPAFPGEKLPLHSSEEAQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKIN 280
Query: 264 RLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
+R +GA I++ A +++ + I+G P A Y ++
Sbjct: 281 EIRQMSGAQIKIANATE-----GSSERQITITGTPANISLAQYLIN 321
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 13/73 (17%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS- 539
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 258 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 310
Query: 540 -----SEHLISAH 547
+++LI+A
Sbjct: 311 ANISLAQYLINAR 323
>gi|452989355|gb|EME89110.1| hypothetical protein MYCFIDRAFT_71441 [Pseudocercospora fijiensis
CIRAD86]
Length = 360
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 83/344 (24%), Positives = 152/344 (44%), Gaps = 56/344 (16%)
Query: 107 KKGNWSNSSR---EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
K G S R E+ + SQ R + S++ G +IGKAG V LR++T + V
Sbjct: 20 KMGGLSTDERPRTEEEYAQSQ---LTLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGV 76
Query: 164 ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE 223
+ +PG +RV+ + + T I+ DA V D +++
Sbjct: 77 SKVVPGVHDRVLTVTGALTGIS-------------------------DAYGLVADSLVKG 111
Query: 224 DLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP 283
GM N N T RLL+ +N +G ++G++G I++++ +G +R++ + P
Sbjct: 112 VPQMGMGGVVGNPN-THPIRLLISHNQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLP 168
Query: 284 CAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPP----- 338
+T+ +V++ G P ++A++E+ L + ++ Y G +SP
Sbjct: 169 --QSTERIVEVQGTPEGVQKAVWEIGKCLIDDEQR---------GY-GTVLYSPAVRVQG 216
Query: 339 -APMADMHPLGNSSWPARNSSLHGMPSTPWMGGY--GDQPSRMGSGSINSCPPGQMGEVS 395
AP ++ G S R+ + G + GG P R +G + PP + +
Sbjct: 217 GAPAPPLNGTGASYGAPRSYNRTGN-GADFTGGQSPSSYPPRR-NGPSDGGPPPRPEDGE 274
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
+ I A +G +IG+GG + ++++ +GA I + AP D
Sbjct: 275 DIQTQNISIPADMVGCIIGRGGSKISEIRKSSGARISIAKAPHD 318
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/181 (23%), Positives = 88/181 (48%), Gaps = 10/181 (5%)
Query: 370 GYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGA 429
G G+ +MG S + P + ++ +++ + ++ + G +IGK G NV L+ +TG
Sbjct: 13 GIGNLADKMGGLSTDERPRTEEEYAQSQLTLRAIVTSKEAGVIIGKAGQNVADLRDKTGV 72
Query: 430 SIHVEDAPTDSDERVIRAS-AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITT---RLL 485
V +RV+ + A G+ + D++++ + G T RLL
Sbjct: 73 RAGVSKVVPGVHDRVLTVTGALTGISDAYGLVADSLVKGVPQMGMGGVVGNPNTHPIRLL 132
Query: 486 VPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLIS 545
+ +++G I+G+ G I ++ + + +R+V + L P S+E IV+++G+ E +
Sbjct: 133 ISHNQMGTIIGRQGLKIKQI--QDASGVRMVAQKEML----PQSTERIVEVQGTPEGVQK 186
Query: 546 A 546
A
Sbjct: 187 A 187
>gi|348528027|ref|XP_003451520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Oreochromis niloticus]
Length = 429
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 105/452 (23%), Positives = 180/452 (39%), Gaps = 79/452 (17%)
Query: 117 EQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
EQ+F S+ D + R+L S+ G VIGK G +K+LR + A ++V D+ ER+
Sbjct: 31 EQAFKRSRNTDEMVELRVLLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERI 88
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD 234
+ + +S I + LLK+ + E + G+ D
Sbjct: 89 LSVNASIDTIGEI-------------------------LLKIIPTLEEYQHYSGIDFD-- 121
Query: 235 NENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
RLL+ ++ G ++G +G I+ LR T I++ C +TD +V +
Sbjct: 122 -----CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLV 172
Query: 295 SGKPNVAKRALYEVSTLLHQNPRKDKP----PSSFPQAYGGQNFHSPPAPMADMHPLGNS 350
GKP + + L+ + P K + P+ + + Y F P+G
Sbjct: 173 GGKPERVVECIKVILELVSEAPIKGRAQPYDPNFYDETYDYGGFTMLFEERG-RRPIGG- 230
Query: 351 SWPAR-NSSLHGMPSTPWMGGYGDQPSRMGSGSIN--SCPP-----GQMGEVSAEFSMKI 402
+P R MP P G PSR ++ PP G+ G + +
Sbjct: 231 -FPIRVRGGFERMP--PVRGSRPMPPSRRDYDDMSPRRGPPPPLSRGRGGSRARNLPLPP 287
Query: 403 LCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTID 462
G G ++ ++D P+D R R + G S + D
Sbjct: 288 PPPPRGGGDRFSHGSYHGS-----------MDDRPSDRRGRGDRYDSMSGGGYDNSSSWD 336
Query: 463 AILQLQNKTSEFSEKG--TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARV 520
Q + S +S+ G ITT++ +P G I+G+GG I ++R + GA +
Sbjct: 337 H-FQSGGRGS-YSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHES-------GASI 387
Query: 521 KLQDPHPGSSECIVDIRGSSEHLISAHGTYQS 552
K+ +P GS + I+ I G+ + + +A Q+
Sbjct: 388 KIDEPLEGSEDRIITITGTQDQIQNAQYLLQN 419
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GG S D IT ++ +P ++ G ++GK G I+++R E+GA+I++ P
Sbjct: 341 GGRGSYSDIGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEG 395
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+ D ++ I+G + + A Y + + Q
Sbjct: 396 SEDRIITITGTQDQIQNAQYLLQNSVRQ 423
>gi|194387672|dbj|BAG61249.1| unnamed protein product [Homo sapiens]
Length = 282
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 107/251 (42%), Gaps = 39/251 (15%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 28 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 86
Query: 155 EETQAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETK-------------- 199
E T A++ VA D +P S ER I I P I + + ET
Sbjct: 87 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 146
Query: 200 KESMEPHCAAQDALLKVHDRIIEEDL---------FGGMASDD---------DNENSTIT 241
K S P A L K+H +++ F G+ S D T +
Sbjct: 147 KPSSSPVIFAGGQLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYWGLDASAQTTS 206
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
L +PN+++GC++G++G I +R +GA I++ P +TD V I+G
Sbjct: 207 HELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI-----ANPVEGSTDRQVTITGSAASI 261
Query: 302 KRALYEVSTLL 312
A Y ++ L
Sbjct: 262 SLAQYLINVRL 272
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 60/251 (23%), Positives = 104/251 (41%), Gaps = 46/251 (18%)
Query: 211 DALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRS 267
+A+ K II EED+ M + +T RL+VP + G L+GK G I+ +R
Sbjct: 28 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 87
Query: 268 ETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKP------ 321
TGA ++V D LP +T+ + I+G P + ++ ++ + + P
Sbjct: 88 STGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIP 143
Query: 322 ----PSSFPQAYGGQNFHSPPAPMADMHPLG--NSSWPAR--NSSLHGMP-STPWMGGYG 372
PSS P + G + +H L S +P N+ G+ S+P + GY
Sbjct: 144 YRPKPSSSPVIFAG-------GQLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYW 196
Query: 373 DQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIH 432
+ + S P + IG +IG+ G + +++Q +GA I
Sbjct: 197 GLDASAQTTSHELTIPNDL-----------------IGCIIGRQGAKINEIRQMSGAQIK 239
Query: 433 VEDAPTDSDER 443
+ + S +R
Sbjct: 240 IANPVEGSTDR 250
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/128 (28%), Positives = 68/128 (53%), Gaps = 16/128 (12%)
Query: 423 LQQETGASIHVEDAPTDSDERVIR-ASAFEGLWNPRSQTIDAILQ-----LQNKTSEFSE 476
+++E+GA I++ + + ER+I A ++ + ID + + + N T+ +
Sbjct: 1 MREESGARINISEG--NCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSMTNSTA--AS 56
Query: 477 KGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDI 536
+ +T RL+VP+S+ G ++G+GG I E+R T A ++V G D P S+E + I
Sbjct: 57 RPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG------DMLPNSTERAITI 110
Query: 537 RGSSEHLI 544
G + +I
Sbjct: 111 AGIPQSII 118
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 204 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 256
Query: 539 SSEHL 543
S+ +
Sbjct: 257 SAASI 261
>gi|7141072|gb|AAF37203.1|AF198254_1 mRNA-binding protein CRDBP [Homo sapiens]
Length = 577
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 159/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ + L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKTLAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ +P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLTPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 389 SVTGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|302564995|ref|NP_001180850.1| insulin-like growth factor 2 mRNA-binding protein 1 [Macaca
mulatta]
Length = 577
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 159/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 389 SVTGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|321475563|gb|EFX86525.1| hypothetical protein DAPPUDRAFT_307836 [Daphnia pulex]
Length = 364
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 92/344 (26%), Positives = 146/344 (42%), Gaps = 75/344 (21%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G IVK REE+ A+I ++D GS ER++ I +
Sbjct: 21 RLLMAGKEVGSIIGKKGEIVKRFREESGARINISD---GSCPERIVTITGT--------- 68
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIE--EDLFGGMASDDDNENSTITARLLVP 247
DA+ K + I + E+ GG + IT RL++P
Sbjct: 69 --------------------TDAIFKAFNLICKKLEEEVGGPLAGTAIPRPPITLRLIMP 108
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA++ V+ ++ LP +T+ V +SG + + +Y
Sbjct: 109 ASQCGSLIGKGGSKIKEIREITGASV-VVASEMLP---NSTERAVTVSGTSDAITQCIYH 164
Query: 308 VSTLLHQNPRKD-------KPPSSFP------QAYGGQ-NFHSPPAPMADM-----HPLG 348
+ ++ ++P K KP P QAY Q N+ P P DM +PL
Sbjct: 165 ICCVMLESPPKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPATP--DMNKLSGNPLA 222
Query: 349 N-----SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKIL 403
N M ++ G Q G G S P Q E++ +
Sbjct: 223 NLAALGLGGLTGTGGGGSMNASALAALAGSQLRSGGGGGPQSGAPQQSQEMAVPNEL--- 279
Query: 404 CSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP--TDSDERVI 445
IG +IGKGG + +++Q +GA I + + S ER I
Sbjct: 280 -----IGCIIGKGGTKIAEIRQISGAMIRISNCEDRESSSERTI 318
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 81/162 (50%), Gaps = 31/162 (19%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S ++++L + ++G +IGK G VK+ ++E+GA I++ D ER++ +
Sbjct: 15 SVTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINISDG--SCPERIVTITG----- 67
Query: 455 NPRSQTIDAILQLQNKTSEFSEK-------GT------ITTRLLVPSSKVGCILGQGGHV 501
T DAI + N + E+ GT IT RL++P+S+ G ++G+GG
Sbjct: 68 -----TTDAIFKAFNLICKKLEEEVGGPLAGTAIPRPPITLRLIMPASQCGSLIGKGGSK 122
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
I E+R T A + V + P S+E V + G+S+ +
Sbjct: 123 IKEIREITGASVVVASEML------PNSTERAVTVSGTSDAI 158
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 29/42 (69%)
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
D + T+T RLL+ VG ++GK+G++++R R E+GA I +
Sbjct: 12 DAPSVTLTIRLLMAGKEVGSIIGKKGEIVKRFREESGARINI 53
>gi|335297826|ref|XP_003358128.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Sus scrofa]
Length = 577
Score = 72.0 bits (175), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 159/398 (39%), Gaps = 72/398 (18%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPT 182
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S+P
Sbjct: 192 QQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTP- 250
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
E +A +L++ + + D +
Sbjct: 251 ---------------------EGCSSACKMILEIMHK----------EAKDTKTADEVPL 279
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIENCC 337
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
RA E+ + + D S Q+ P +A + SS
Sbjct: 338 RAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPSSVT 391
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+ P+ S P +M +++ A +G +IGK G ++KQ
Sbjct: 392 GAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQHIKQ 430
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EK 477
L + ASI + AP ++ + +R G P A ++ K E + E+
Sbjct: 431 LSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGPKEE 485
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 486 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|431890756|gb|ELK01635.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Pteropus
alecto]
Length = 577
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 159/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 389 SVAGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|410355313|gb|JAA44260.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 103/439 (23%), Positives = 174/439 (39%), Gaps = 111/439 (25%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 161
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST-- 365
+ ++ + + Q+ G+ P PM P+ + R S G P
Sbjct: 162 ICLVMLE---------TLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATH 212
Query: 366 ----PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVK 421
P + Y Q G +I+ ++ +V+ + S + G GF
Sbjct: 213 DLEGPPLDAYSIQ----GQHTISPLDLAKLNQVARQQSHFAMMHGGT--------GF--- 257
Query: 422 QLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
A DS ++ G W ++DA Q T
Sbjct: 258 --------------AGIDSSSPEVK-----GYW----ASLDASTQ-------------TT 281
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSE 541
L +P++ +G I+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 282 HELTIPNNLIGYIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSAA 334
Query: 542 HLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 335 SISLAQYLINARLSSEKGM 353
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTERAITIAG 150
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
>gi|397521979|ref|XP_003846057.1| PREDICTED: LOW QUALITY PROTEIN: poly(rC)-binding protein 2 [Pan
paniscus]
Length = 465
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 99/215 (46%), Gaps = 44/215 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPR------KDKPPSSFPQAYGGQNFHS 336
+ ++ ++P+ + KP SS GGQ+ +S
Sbjct: 162 ICVVMLESPKGVTIPYRPKPSSSPVIFAGGQDRYS 196
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 283 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 335
Query: 539 SSEHL 543
S+ +
Sbjct: 336 SAASI 340
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|350412234|ref|XP_003489579.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
impatiens]
Length = 736
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 126/308 (40%), Gaps = 61/308 (19%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE-ERVIIIYSSPTKIAKTQNK 190
I+ P K+G +IGK G +K L+E++ AK+ V P E E+ + I P K+ +
Sbjct: 203 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQL 262
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN----STITARLLV 246
+ AE KE H A + +DR G S+D + N +T +LV
Sbjct: 263 VYELIAE--KEMQMFHRGA-----RGNDR-------SGNYSNDSSFNHGSGTTDGVEVLV 308
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P VG ++GK GD+I+++++ETGA ++ P D +SGK ++
Sbjct: 309 PRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPG----DRKCIVSGKHQAVEQVRQ 364
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTP 366
+ L+ R+D S+ G P GN RN +
Sbjct: 365 RIQELIDSVMRRDDGRSNIGARSG---------------PRGNGFGNNRNPNE------- 402
Query: 367 WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQE 426
YG R G G + + + K G +IGKGG +KQ+ Q+
Sbjct: 403 ----YGGWDRRQG------------GPMQDKIETMFTVPSSKCGIIIGKGGETIKQINQQ 446
Query: 427 TGASIHVE 434
TGA ++
Sbjct: 447 TGAHCELD 454
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 167/448 (37%), Gaps = 120/448 (26%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKD 191
I P +G +IG+ G + L+ ET KI +A G ER+ + S + +
Sbjct: 112 IRVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERLCTLTGSREAVNR----- 166
Query: 192 DDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS-TITARLLVPNNM 250
A++ +L + ++ + G M S + +++P
Sbjct: 167 -----------------AKELVLSIVNQRSRTEGIGDMGGSSGGIMSHSGFVEIMIPGPK 209
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
VG ++GK G+ I++L+ ++GA + V+ + ++ ++I+G P + A V
Sbjct: 210 VGLIIGKGGETIKQLQEKSGAKMVVIQEG----PSQEQEKPLRITGDPQKVEYAKQLVYE 265
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGG 370
L+ + Q FH AR + G S
Sbjct: 266 LIAEKEM--------------QMFHR----------------GARGNDRSGNYSN----- 290
Query: 371 YGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGAS 430
D GSG+ + +++L +G VIGKGG +K++Q ETGA
Sbjct: 291 --DSSFNHGSGTTD--------------GVEVLVPRAAVGVVIGKGGDMIKKIQAETGAR 334
Query: 431 IHVEDAPTD--SDERVIRASAFEGLWNPR---SQTIDAILQLQNKTSEFSEKG------- 478
+ + D D + I + + + R + ID++++ + S +
Sbjct: 335 VQFQQGREDGPGDRKCIVSGKHQAVEQVRQRIQELIDSVMRRDDGRSNIGARSGPRGNGF 394
Query: 479 ----------------------TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
I T VPSSK G I+G+GG I ++ ++T
Sbjct: 395 GNNRNPNEYGGWDRRQGGPMQDKIETMFTVPSSKCGIIIGKGGETIKQINQQT------- 447
Query: 517 GARVKL-QDPHPGSSECIVDIRGSSEHL 543
GA +L + +E I IRG+ E +
Sbjct: 448 GAHCELDRRNQSNENEKIFIIRGNPEQV 475
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 377 RMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 436
R G + P G +G + E I +G +IG+GG + +LQ ETG I +
Sbjct: 90 RTGQAGSSGGPIGNVGGICNE---DIRVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPE 146
Query: 437 PTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT---------TRLLVP 487
ER+ + N + + +I+ +++T + G + +++P
Sbjct: 147 SGGLPERLCTLTGSREAVNRAKELVLSIVNQRSRTEGIGDMGGSSGGIMSHSGFVEIMIP 206
Query: 488 SSKVGCILGQGGHVINEMRRRTQADIRVV 516
KVG I+G+GG I +++ ++ A + V+
Sbjct: 207 GPKVGLIIGKGGETIKQLQEKSGAKMVVI 235
>gi|332215031|ref|XP_003256640.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 3 [Nomascus leucogenys]
Length = 556
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 162/414 (39%), Gaps = 96/414 (23%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N HS + ++P
Sbjct: 320 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNTHS--GYFSSLYP 368
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
H P Y +Q +N P Q
Sbjct: 369 H------------HQFGPFPHHHSYPEQEI------VNLFIPTQA--------------- 395
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
+G +IGK G ++KQL + GASI + + P S+ VI E + + + +
Sbjct: 396 --VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKL 453
Query: 465 LQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 454 -----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 502
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 379 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 438
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 439 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 467
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 468 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 524
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 525 SQTAQRKIREI 535
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 163 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 218
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 219 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT-SEACRMILEIMQKEADETKLAEE--I 275
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 276 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 331
Query: 541 EHLISA 546
E SA
Sbjct: 332 EACASA 337
>gi|403270472|ref|XP_003927203.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
[Saimiri boliviensis boliviensis]
Length = 585
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 100/422 (23%), Positives = 171/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQS---FGNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 160 HSSREQGNAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 219
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E A +L++ + EE
Sbjct: 220 NSGAAEKPVTIHATP----------------------EGTSEACRMILEIMQKEAEETKL 257
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 258 A----------EEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 305
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 306 NPERTITVKGTVEACACAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 356
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + S G P Y P SG +S P Q G S
Sbjct: 357 LGIFSTGLSVLSPPAGPRGAPPAAPY--HPFATHSGYFSSLYPHHQFGPFPHHHSYPEQE 414
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 415 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 474
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 475 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 529
Query: 514 RV 515
V
Sbjct: 530 IV 531
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 408 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 467
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 468 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 496
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 497 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 553
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 554 SQTAQRKIREI 564
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 43/182 (23%), Positives = 81/182 (44%), Gaps = 15/182 (8%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR + P G +F ++IL +G +IGK G +K
Sbjct: 149 PSPPQRAQRGDHSSR----EQGNAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 204
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG-T 479
+ ++T + IH ++ +++ V + EG S+ IL++ K +E ++
Sbjct: 205 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG----TSEACRMILEIMQKEAEETKLAEE 260
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
I ++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 261 IPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGT 316
Query: 540 SE 541
E
Sbjct: 317 VE 318
>gi|56237027|ref|NP_006537.3| insulin-like growth factor 2 mRNA-binding protein 1 isoform 1 [Homo
sapiens]
gi|296202548|ref|XP_002748506.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Callithrix jacchus]
gi|297715965|ref|XP_002834307.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pongo abelii]
gi|332259442|ref|XP_003278798.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Nomascus leucogenys]
gi|354483617|ref|XP_003503989.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cricetulus griseus]
gi|402899533|ref|XP_003912749.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Papio anubis]
gi|296434536|sp|Q9NZI8.2|IF2B1_HUMAN RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 1;
Short=IGF2 mRNA-binding protein 1; Short=IMP-1; AltName:
Full=Coding region determinant-binding protein;
Short=CRD-BP; AltName: Full=IGF-II mRNA-binding protein
1; AltName: Full=VICKZ family member 1; AltName:
Full=Zip code-binding protein 1; Short=ZBP-1;
Short=Zipcode-binding protein 1
gi|4191608|gb|AAD09826.1| IGF-II mRNA-binding protein 1 [Homo sapiens]
gi|157170258|gb|AAI52771.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|162318726|gb|AAI56958.1| Insulin-like growth factor 2 mRNA binding protein 1 [synthetic
construct]
gi|168275834|dbj|BAG10637.1| insulin-like growth factor 2 mRNA-binding protein 1 [synthetic
construct]
gi|189053788|dbj|BAG36040.1| unnamed protein product [Homo sapiens]
gi|355568496|gb|EHH24777.1| hypothetical protein EGK_08493 [Macaca mulatta]
Length = 577
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 159/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 389 SVTGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|340728851|ref|XP_003402727.1| PREDICTED: far upstream element-binding protein 1-like [Bombus
terrestris]
Length = 738
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 126/308 (40%), Gaps = 61/308 (19%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE-ERVIIIYSSPTKIAKTQNK 190
I+ P K+G +IGK G +K L+E++ AK+ V P E E+ + I P K+ +
Sbjct: 203 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQL 262
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN----STITARLLV 246
+ AE KE H A + +DR G S+D + N +T +LV
Sbjct: 263 VYELIAE--KEMQMFHRGA-----RGNDR-------SGNYSNDSSFNHGSGTTDGVEVLV 308
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P VG ++GK GD+I+++++ETGA ++ P D +SGK ++
Sbjct: 309 PRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPG----DRKCIVSGKHQAVEQVRQ 364
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTP 366
+ L+ R+D S+ G P GN RN +
Sbjct: 365 RIQELIDSVMRRDDGRSNIGARSG---------------PRGNGFGNNRNPNE------- 402
Query: 367 WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQE 426
YG R G G + + + K G +IGKGG +KQ+ Q+
Sbjct: 403 ----YGGWDRRQG------------GPMQDKIETMFTVPSSKCGIIIGKGGETIKQINQQ 446
Query: 427 TGASIHVE 434
TGA ++
Sbjct: 447 TGAHCELD 454
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 93/448 (20%), Positives = 167/448 (37%), Gaps = 120/448 (26%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKD 191
I P +G +IG+ G + L+ ET KI +A G ER+ + S + +
Sbjct: 112 IRVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPESGGLPERLCTLTGSREAVNR----- 166
Query: 192 DDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS-TITARLLVPNNM 250
A++ +L + ++ + G M S + +++P
Sbjct: 167 -----------------AKELVLSIVNQRSRTEGIGDMGGSSGGLMSHSGFVEIMIPGPK 209
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
VG ++GK G+ I++L+ ++GA + V+ + ++ ++I+G P + A V
Sbjct: 210 VGLIIGKGGETIKQLQEKSGAKMVVIQEG----PSQEQEKPLRITGDPQKVEYAKQLVYE 265
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGG 370
L+ + Q FH AR + G S
Sbjct: 266 LIAEKEM--------------QMFHR----------------GARGNDRSGNYSN----- 290
Query: 371 YGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGAS 430
D GSG+ + +++L +G VIGKGG +K++Q ETGA
Sbjct: 291 --DSSFNHGSGTTD--------------GVEVLVPRAAVGVVIGKGGDMIKKIQAETGAR 334
Query: 431 IHVEDAPTD--SDERVIRASAFEGLWNPR---SQTIDAILQLQNKTSEFSEKG------- 478
+ + D D + I + + + R + ID++++ + S +
Sbjct: 335 VQFQQGREDGPGDRKCIVSGKHQAVEQVRQRIQELIDSVMRRDDGRSNIGARSGPRGNGF 394
Query: 479 ----------------------TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
I T VPSSK G I+G+GG I ++ ++T
Sbjct: 395 GNNRNPNEYGGWDRRQGGPMQDKIETMFTVPSSKCGIIIGKGGETIKQINQQT------- 447
Query: 517 GARVKL-QDPHPGSSECIVDIRGSSEHL 543
GA +L + +E I IRG+ E +
Sbjct: 448 GAHCELDRRNQSNENEKIFIIRGNPEQV 475
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 67/149 (44%), Gaps = 12/149 (8%)
Query: 377 RMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 436
R G + P G +G + E I +G +IG+GG + +LQ ETG I +
Sbjct: 90 RTGQAGSSGGPIGNVGGICNE---DIRVPDNMVGLIIGRGGEQITRLQSETGCKIQMAPE 146
Query: 437 PTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT---------TRLLVP 487
ER+ + N + + +I+ +++T + G + +++P
Sbjct: 147 SGGLPERLCTLTGSREAVNRAKELVLSIVNQRSRTEGIGDMGGSSGGLMSHSGFVEIMIP 206
Query: 488 SSKVGCILGQGGHVINEMRRRTQADIRVV 516
KVG I+G+GG I +++ ++ A + V+
Sbjct: 207 GPKVGLIIGKGGETIKQLQEKSGAKMVVI 235
>gi|114666310|ref|XP_511944.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Pan troglodytes]
gi|397477448|ref|XP_003810082.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Pan paniscus]
Length = 577
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 159/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 389 SVTGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|73966275|ref|XP_548184.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 2 [Canis lupus familiaris]
gi|301762950|ref|XP_002916873.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Ailuropoda melanoleuca]
gi|410980809|ref|XP_003996768.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Felis catus]
gi|281344391|gb|EFB19975.1| hypothetical protein PANDA_005026 [Ailuropoda melanoleuca]
Length = 577
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 159/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 389 SVTGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|109042331|ref|XP_001095005.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Macaca mulatta]
gi|402860701|ref|XP_003894761.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2
isoform 2 [Papio anubis]
Length = 556
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 162/414 (39%), Gaps = 96/414 (23%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N HS + ++P
Sbjct: 320 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNTHS--GYFSSLYP 368
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
H P Y +Q +N P Q
Sbjct: 369 H------------HQFGPFPHHHSYPEQEV------VNLFIPTQA--------------- 395
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
+G +IGK G ++KQL + GASI + + P S+ VI E + + + +
Sbjct: 396 --VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKL 453
Query: 465 LQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 454 -----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 502
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P V + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 379 HSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 438
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 439 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 467
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 468 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 524
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 525 SQTAQRKIREI 535
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 163 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 218
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 219 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT-SEACRMILEIMQKEADETKLAEE--I 275
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 276 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 331
Query: 541 EHLISA 546
E SA
Sbjct: 332 EACASA 337
>gi|300794399|ref|NP_001179383.1| insulin-like growth factor 2 mRNA-binding protein 1 [Bos taurus]
gi|296476533|tpg|DAA18648.1| TPA: insulin-like growth factor 2 mRNA binding protein 1-like [Bos
taurus]
Length = 577
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 159/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 389 SVTGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|440910511|gb|ELR60305.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Bos grunniens
mutus]
Length = 577
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 159/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 389 SVTGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|149723930|ref|XP_001502310.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 1
isoform 1 [Equus caballus]
Length = 577
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 159/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 389 SVTGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|345796407|ref|XP_003434167.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2
isoform 1 [Canis lupus familiaris]
Length = 488
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 163/414 (39%), Gaps = 96/414 (23%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 106 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 165
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 166 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 194
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 195 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 251
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N HS + ++P
Sbjct: 252 NPERTITVKGTVEACANAEVEIMKKLRE---------AFENDMLAVNTHS--GYFSSLYP 300
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
H P Y +Q +N P Q
Sbjct: 301 P------------HQFGPFPHHHSYPEQEI------VNLFIPTQA--------------- 327
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
+G +IGK G ++KQL + GASI + + P S+ VI E + + + +
Sbjct: 328 --VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKL 385
Query: 465 LQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 386 -----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 434
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 311 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 370
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 371 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 399
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 400 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 456
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 457 SQTAQRKIREI 467
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
P+ P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 95 PTPPQRAQRGDHSSR----EQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 150
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 151 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 207
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 208 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 263
Query: 541 E 541
E
Sbjct: 264 E 264
>gi|403279506|ref|XP_003931289.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Saimiri boliviensis boliviensis]
Length = 577
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 159/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 389 SVTGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|344285913|ref|XP_003414704.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
isoform 1 [Loxodonta africana]
Length = 577
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 159/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 389 SVTGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|291400301|ref|XP_002716510.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 2-like
isoform 2 [Oryctolagus cuniculus]
Length = 556
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 163/414 (39%), Gaps = 96/414 (23%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N HS + ++P
Sbjct: 320 NPERTITVKGTVEACASAEAEIMKKLRE---------AFENDMLAVNTHS--GYFSSLYP 368
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
H P Y +Q +N P Q
Sbjct: 369 H------------HQFGPFPHHHSYPEQEI------VNLFIPTQA--------------- 395
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
+G +IGK G ++KQL + GASI + + P S+ VI E + + + +
Sbjct: 396 --VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKL 453
Query: 465 LQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 454 -----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 502
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 379 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 438
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 439 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 467
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 468 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 524
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 525 SQTAQRKIREI 535
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 83/188 (44%), Gaps = 13/188 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 163 PSPPQRAQRGDHSSR----EQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 218
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 219 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT-SEACRMILEIMQKEADETKLAEE--I 275
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 276 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 331
Query: 541 EHLISAHG 548
E SA
Sbjct: 332 EACASAEA 339
>gi|197101075|ref|NP_001125573.1| insulin-like growth factor 2 mRNA-binding protein 2 [Pongo abelii]
gi|75041981|sp|Q5RB68.1|IF2B2_PONAB RecName: Full=Insulin-like growth factor 2 mRNA-binding protein 2;
Short=IGF2 mRNA-binding protein 2; Short=IMP-2; AltName:
Full=IGF-II mRNA-binding protein 2; AltName: Full=VICKZ
family member 2
gi|55728499|emb|CAH90992.1| hypothetical protein [Pongo abelii]
Length = 556
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 162/414 (39%), Gaps = 96/414 (23%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N HS + ++P
Sbjct: 320 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNTHS--GYFSSLYP 368
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
H P Y +Q +N P Q
Sbjct: 369 H------------HQFGPFPHHHSYPEQEI------VNLFIPTQA--------------- 395
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
+G +IGK G ++KQL + GASI + + P S+ VI E + + + +
Sbjct: 396 --VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKL 453
Query: 465 LQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 454 -----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 502
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 379 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 438
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 439 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 467
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 468 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 524
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 525 SQTAQRKIREI 535
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 163 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 218
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 219 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT-SEACRMILEIMQKEADETKLAEE--I 275
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 276 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 331
Query: 541 EHLISA 546
E SA
Sbjct: 332 EACASA 337
>gi|291405848|ref|XP_002719162.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein
1-like, partial [Oryctolagus cuniculus]
Length = 570
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 158/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I I+S
Sbjct: 182 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHS 241
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 242 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 269
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 270 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 327
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S L + P N +
Sbjct: 328 NCCRAEQEIMKKVREAYENDVAAMS----------------------LQSHLIPGLNLAA 365
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
G+ S G+ +S EV +++ A +G +IGK G +
Sbjct: 366 VGLFPASSSAVPPPPSSVTGAAPYSSFMQAPEQEV-----VQVFIPAQAVGAIIGKKGQH 420
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 421 IKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 475
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 476 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 516
>gi|383858339|ref|XP_003704659.1| PREDICTED: far upstream element-binding protein 1-like [Megachile
rotundata]
Length = 736
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 80/308 (25%), Positives = 126/308 (40%), Gaps = 61/308 (19%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE-ERVIIIYSSPTKIAKTQNK 190
I+ P K+G +IGK G +K L+E++ AK+ V P E E+ + I P K+ +
Sbjct: 202 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAKQL 261
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN----STITARLLV 246
+ AE KE H A + +DR G S+D + N +T +LV
Sbjct: 262 VYELIAE--KEMQMFHRGA-----RGNDR-------SGSYSNDSSFNHGSGTTDGVEVLV 307
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P VG ++GK GD+I+++++ETGA ++ P D +SGK ++
Sbjct: 308 PRAAVGVVIGKGGDMIKKIQAETGARVQFQQGREDGPG----DRKCILSGKHQAVEQVRQ 363
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTP 366
+ L+ R+D S P+G S P N G +
Sbjct: 364 RIQELIDSVMRRDDGRS----------------------PMGTRSGPRGN----GFGNNR 397
Query: 367 WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQE 426
YG R G G + + + K G +IGKGG +KQ+ Q+
Sbjct: 398 NPNEYGGWDRRQG------------GPMQDKIETTFTVPSSKCGIIIGKGGETIKQINQQ 445
Query: 427 TGASIHVE 434
TGA ++
Sbjct: 446 TGAHCELD 453
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 80/159 (50%), Gaps = 31/159 (19%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGAS-IHVEDAPTDSDERVIRASA--------- 449
++I+ K+G +IGKGG +KQLQ+++GA + +++ P+ E+ +R +
Sbjct: 200 VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQEGPSQEQEKPLRITGDPQKVEYAK 259
Query: 450 ---FEGLWNPRSQTIDAILQLQNKTSEFSEK-----GTITT---RLLVPSSKVGCILGQG 498
+E + Q + +++ +S G+ TT +LVP + VG ++G+G
Sbjct: 260 QLVYELIAEKEMQMFHRGARGNDRSGSYSNDSSFNHGSGTTDGVEVLVPRAAVGVVIGKG 319
Query: 499 GHVINEMRRRTQADIRVVGARVKLQ---DPHPGSSECIV 534
G +I +++ T GARV+ Q + PG +CI+
Sbjct: 320 GDMIKKIQAET-------GARVQFQQGREDGPGDRKCIL 351
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ VP+ MVG ++G+ G+ I RL+SETG I++ P LP + + ++G R
Sbjct: 110 IRVPDKMVGLIIGRGGEQITRLQSETGCKIQMAPESGLP------ERVCTLTGSREAVNR 163
Query: 304 ALYEVSTLLHQNPRKD 319
A V ++++Q R +
Sbjct: 164 AKELVLSIVNQRSRTE 179
Score = 45.4 bits (106), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 70/157 (44%), Gaps = 16/157 (10%)
Query: 372 GDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASI 431
GD ++ +G S P +G V + I +G +IG+GG + +LQ ETG I
Sbjct: 82 GDSNNQGRTGQTGSSGP--IGNVGGICNEDIRVPDKMVGLIIGRGGEQITRLQSETGCKI 139
Query: 432 HVEDAPTDS-DERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT--------- 481
+ AP ERV + N + + +I+ +++T +
Sbjct: 140 QM--APESGLPERVCTLTGSREAVNRAKELVLSIVNQRSRTEGIGDMNMSGSSGGMMGHP 197
Query: 482 --TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+++P KVG I+G+GG I +++ ++ A + V+
Sbjct: 198 GFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVI 234
>gi|432112571|gb|ELK35287.1| Poly(rC)-binding protein 2 [Myotis davidii]
Length = 453
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 45/216 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQVA-GDMLP---NSTERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHS 336
+ ++ ++P K +P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 197
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 112/281 (39%), Gaps = 68/281 (24%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIY----------------------------------S 179
E T A++ VA D +P S ER I I S
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSS 184
Query: 180 SPTKIAKTQNK---DDDSAA---ETKKESMEP---------------HCAAQDALLKVHD 218
SP A Q++ DSA+ T + P + Q L K+H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 219 RIIEEDLF------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
+++ F G ++ D T + L +PN+++GC++G++G I + +GA
Sbjct: 245 LAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIHQMSGAQ 304
Query: 273 IRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
I++ P +TD V I+G A Y ++ L
Sbjct: 305 IKI-----ANPVEGSTDRQVTITGSAASISLAQYLINVSLE 340
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+ + + GA++K+ +P GS++ V I G
Sbjct: 271 TTSHELTIPNDLIGCIIGRQGAKINEIHQMS-------GAQIKIANPVEGSTDRQVTITG 323
Query: 539 SSEHL 543
S+ +
Sbjct: 324 SAASI 328
>gi|74007267|ref|XP_548937.2| PREDICTED: poly(rC)-binding protein 1-like [Canis lupus familiaris]
Length = 362
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 103/437 (23%), Positives = 175/437 (40%), Gaps = 91/437 (20%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A R+L +++G +IGK G K R+E+ A+I +++ G+ II + PT
Sbjct: 12 ATLTIRLLMHRKEVGSIIGKKGESPKRFRKESGARINISE---GNCPERIITLTGPTN-- 66
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
A A + + D++ EED+ M + +T RL+
Sbjct: 67 ----------------------AIFKAFVMIIDKL-EEDINSSMTNSTAASRPPVTLRLV 103
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 104 VPAYQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECV 159
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST 365
++ ++ + + Q+ G+ P PM P+ + R G P
Sbjct: 160 KQICLVMLE---------TLSQSPQGRVMTIPYQPMPASSPVICAGGQDRWGYAAGYPHA 210
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
GY + PP + + ++ L A N QQ
Sbjct: 211 ---AGYPHDTHYL------EGPPLDAYSIQGQHTVSPLDLAK----------LNQVARQQ 251
Query: 426 ETGASIH--VEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTR 483
A +H A DS+ ++ G W ++DA Q T EF+
Sbjct: 252 SHFAMMHGGTGFAGIDSNSPEVK-----GYW----ASLDASTQ---TTHEFT-------- 291
Query: 484 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+ +
Sbjct: 292 --IPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSAASI 342
Query: 544 ISAHGTYQSFMTSGQSM 560
A + ++S + M
Sbjct: 343 SLAQYLINARLSSEKGM 359
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 80/156 (51%), Gaps = 24/156 (15%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG 452
E++A ++++L ++G +IGK G + K+ ++E+GA I++ + + ER+I
Sbjct: 9 ELNATLTIRLLMHRKEVGSIIGKKGESPKRFRKESGARINISEG--NCPERIIT------ 60
Query: 453 LWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHVI 502
L P + A + + +K E + + +T RL+VP+ + G ++G+GG I
Sbjct: 61 LTGPTNAIFKAFVMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPAYQCGSLIGKGGCKI 120
Query: 503 NEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
E+R T A ++V G D P S+E + I G
Sbjct: 121 KEIRESTGAQVQVAG------DMLPNSTERAITIAG 150
Score = 39.3 bits (90), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 27/39 (69%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N+T+T RLL+ VG ++GK+G+ +R R E+GA I +
Sbjct: 11 NATLTIRLLMHRKEVGSIIGKKGESPKRFRKESGARINI 49
>gi|56118219|ref|NP_001007226.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform b [Homo
sapiens]
gi|4883681|gb|AAD31596.1|AF057352_1 hepatocellular carcinoma autoantigen [Homo sapiens]
gi|119598615|gb|EAW78209.1| insulin-like growth factor 2 mRNA binding protein 2, isoform CRA_a
[Homo sapiens]
gi|410223072|gb|JAA08755.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410251294|gb|JAA13614.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410302888|gb|JAA30044.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
gi|410342485|gb|JAA40189.1| insulin-like growth factor 2 mRNA binding protein 2 [Pan
troglodytes]
Length = 556
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 162/414 (39%), Gaps = 96/414 (23%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N HS + ++P
Sbjct: 320 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNTHS--GYFSSLYP 368
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
H P Y +Q +N P Q
Sbjct: 369 H------------HQFGPFPHHHSYPEQEI------VNLFIPTQA--------------- 395
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
+G +IGK G ++KQL + GASI + + P S+ VI E + + + +
Sbjct: 396 --VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKL 453
Query: 465 LQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 454 -----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 502
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 379 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 438
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 439 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 467
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 468 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 524
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 525 SQTAQRKIREI 535
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 163 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 218
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 219 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT-SEACRMILEIMQKEADETKLAEE--I 275
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 276 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 331
Query: 541 EHLISA 546
E SA
Sbjct: 332 EACASA 337
>gi|241025456|ref|XP_002406183.1| poly(rc) binding protein, putative [Ixodes scapularis]
gi|215491885|gb|EEC01526.1| poly(rc) binding protein, putative [Ixodes scapularis]
Length = 398
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 82/346 (23%), Positives = 147/346 (42%), Gaps = 71/346 (20%)
Query: 137 RKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQNKDDDSA 195
+++G +IGK G+ +K REE+ AKI ++D GS ER++ + S I K
Sbjct: 2 QEVGSIIGKKGDNIKKFREESGAKINISD---GSCPERIVTVTGSTEAILKA-------- 50
Query: 196 AETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLL 255
+ R EE ++ +T RL+VP + G L+
Sbjct: 51 ------------------FSLIARKFEEVSTSSHSNGSHLPKPPVTLRLIVPASQCGSLI 92
Query: 256 GKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQN 315
GK G I+ +R E A+I+V ++ LP +T+ V +SG + + +Y++ ++ ++
Sbjct: 93 GKGGSKIKEIR-EARASIQV-ASEMLP---NSTERAVTVSGTADAITKCIYQICCVMMES 147
Query: 316 PRKDK----------PPSSFP--QAYGGQNFHSPPAP-MADMHPLGNSSWPARNSSLHGM 362
P K PP F QAY Q ++ P P + +H L +
Sbjct: 148 PPKGATIPYRPKPAMPPVIFAGGQAYTVQGQYAIPHPDLTKLHQLA-------------L 194
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
P + G+ G+IN P ++ + ++ IG +IGKGG + +
Sbjct: 195 QHAPLLPGHS-------VGAIN---PQAAIATASTTTTEMTIPNDLIGCIIGKGGSKINE 244
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQ 468
++Q +GA+I + ++ S +R + S N I+ ++L
Sbjct: 245 IRQLSGATIKISNSEEGSKDRTVTISGTPEAINLAQYLINTSMELH 290
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 74/140 (52%), Gaps = 13/140 (9%)
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS----AFEGLWNPRSQTIDA 463
++G +IGK G N+K+ ++E+GA I++ D ER++ + A ++ ++ +
Sbjct: 3 EVGSIIGKKGDNIKKFREESGAKINISDG--SCPERIVTVTGSTEAILKAFSLIARKFEE 60
Query: 464 ILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ 523
+ + K +T RL+VP+S+ G ++G+GG I E+ R +A I+V +
Sbjct: 61 VSTSSHSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKIKEI-REARASIQVASEML--- 116
Query: 524 DPHPGSSECIVDIRGSSEHL 543
P S+E V + G+++ +
Sbjct: 117 ---PNSTERAVTVSGTADAI 133
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 104/241 (43%), Gaps = 41/241 (17%)
Query: 114 SSREQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSE 171
S+ S G+ P V R++ P+ + G +IGK G+ +K +RE +A I VA + +P S
Sbjct: 62 STSSHSNGSHLPKPPVTLRLIVPASQCGSLIGKGGSKIKEIRE-ARASIQVASEMLPNST 120
Query: 172 ERVIIIYSSPTKIAKTQNKDDDSAAETK----------KESMEP--------------HC 207
ER + + + I K + E+ K +M P +
Sbjct: 121 ERAVTVSGTADAITKCIYQICCVMMESPPKGATIPYRPKPAMPPVIFAGGQAYTVQGQYA 180
Query: 208 AAQDALLKVHDRIIEED-LFGGMASDDDN------ENSTITARLLVPNNMVGCLLGKRGD 260
L K+H ++ L G + N ST T + +PN+++GC++GK G
Sbjct: 181 IPHPDLTKLHQLALQHAPLLPGHSVGAINPQAAIATASTTTTEMTIPNDLIGCIIGKGGS 240
Query: 261 VIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTL--LHQNPRK 318
I +R +GA I++ ++ + D V ISG P A Y ++T LH+N
Sbjct: 241 KINEIRQLSGATIKISNSEE-----GSKDRTVTISGTPEAINLAQYLINTSMELHKNLTL 295
Query: 319 D 319
D
Sbjct: 296 D 296
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 7/58 (12%)
Query: 486 VPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+P+ +GCI+G+GG INE+R+ + GA +K+ + GS + V I G+ E +
Sbjct: 226 IPNDLIGCIIGKGGSKINEIRQLS-------GATIKISNSEEGSKDRTVTISGTPEAI 276
>gi|74141926|dbj|BAE41029.1| unnamed protein product [Mus musculus]
Length = 278
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 39/213 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN------- 66
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
A A + D++ EED+ M + +T RL+VP +
Sbjct: 67 -----------------AIFKAFAMIIDKL-EEDISSSMTNSTAASRPPVTLRLVVPASQ 108
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + ++
Sbjct: 109 CGSLIGKGGCKIKEIRESTGAQVQVA-GDMLP---NSTERAITIAGIPQSIIECVKQICV 164
Query: 311 LLHQNPRKD-----KP-PSSFPQAY-GGQNFHS 336
++ ++P K +P PSS P + GGQ+ +S
Sbjct: 165 VMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 197
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|296491333|tpg|DAA33396.1| TPA: insulin-like growth factor 2 mRNA binding protein 2 isoform 2
[Bos taurus]
Length = 556
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 163/414 (39%), Gaps = 96/414 (23%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N HS + ++P
Sbjct: 320 NPERTITVKGTVEACANAEIEIMKKLRE---------AFENDMLAVNTHS--GYFSSLYP 368
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
H P Y +Q +N P Q
Sbjct: 369 P------------HQFGPFPHHHSYPEQEI------VNLFIPTQA--------------- 395
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
+G +IGK G ++KQL + GASI + + P S+ VI E + + + +
Sbjct: 396 --VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKL 453
Query: 465 LQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 454 -----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 502
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 379 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 438
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 439 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 467
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 468 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 524
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 525 SQTAQRKIREI 535
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 163 PSPPQRAQRGDHSSR----EQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 218
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 219 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT-SEACRMILEIMQKEADETKLAEE--I 275
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 276 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 331
Query: 541 E 541
E
Sbjct: 332 E 332
>gi|426347646|ref|XP_004041460.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Gorilla gorilla gorilla]
Length = 525
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 159/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 137 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 196
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 197 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 224
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 225 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 282
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 283 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 336
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 337 SVTGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 375
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 376 IKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 430
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 431 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 471
>gi|301759725|ref|XP_002915743.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Ailuropoda melanoleuca]
Length = 556
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 163/414 (39%), Gaps = 96/414 (23%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G+SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N HS + ++P
Sbjct: 320 NPERTITVKGTVEACANAEVEIMKKLRE---------AFENDMLAVNTHS--GYFSSLYP 368
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
H P Y +Q +N P Q
Sbjct: 369 P------------HQFGPFPHHHSYPEQEI------VNLFIPTQA--------------- 395
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
+G +IGK G ++KQL + GASI + + P S+ VI E + + + +
Sbjct: 396 --VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKL 453
Query: 465 LQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 454 -----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 502
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 379 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 438
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 439 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 467
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 468 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 524
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 525 SQTAQRKIREI 535
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 42/181 (23%), Positives = 81/181 (44%), Gaps = 13/181 (7%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 163 PSPPQRAQRGDHSSR----EQGHAPGGSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 218
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 219 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT-SEACRMILEIMQKEADETKLAEE--I 275
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 276 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 331
Query: 541 E 541
E
Sbjct: 332 E 332
>gi|407924223|gb|EKG17277.1| K-like protein [Macrophomina phaseolina MS6]
Length = 357
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/353 (24%), Positives = 156/353 (44%), Gaps = 53/353 (15%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A R + S++ G +IGKAG V +LR+ET + V+ +PG +RV+ + + + I+
Sbjct: 43 AQLTLRAIVSSKEAGVIIGKAGQNVANLRDETGVRAGVSKVVPGVHDRVLTVTGALSGIS 102
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
K H A+ LL+ + GG+ N + T RLL
Sbjct: 103 KAY-----------------HLVAK-GLLEGAPSV----GMGGVI----NTSGTHPVRLL 136
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+ +N +G ++G+ G I++++ +G +R++ + P +T+ +V+I G P ++A
Sbjct: 137 ISHNQMGTIIGRAGLKIKQIQDASG--VRMVAQKEMLP--QSTERIVEIQGTPEGIEKAT 192
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST 365
+E+ L + + + A Q + P GN S+ N + HG
Sbjct: 193 WEIGKCLIDDHERGYGTVLYNPAVRVQAGTTGPVTNGFT---GNRSY---NRTGHG---- 242
Query: 366 PWMGGYGDQPS---RMGSGSINSCPPGQMGEVSAEF-SMKILCSAGKIGGVIGKGGFNVK 421
+ D P+ R GS + + P E E + I + +G +IG+GG +
Sbjct: 243 ---NDFSDSPTYSRRSGSDAASRPPMPTTTEDGEEIQTQNISIPSDMVGCIIGRGGSKIS 299
Query: 422 QLQQETGASIHVEDAPTD-SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSE 473
++++ +GA I + AP D + ER+ F + +P S L +N +E
Sbjct: 300 EIRKSSGARISIAKAPHDETGERM-----FTIMGSPSSNEKALYLLYENLEAE 347
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLW 454
A+ +++ + S+ + G +IGK G NV L+ ETG V +RV+ + A G+
Sbjct: 43 AQLTLRAIVSSKEAGVIIGKAGQNVANLRDETGVRAGVSKVVPGVHDRVLTVTGALSGIS 102
Query: 455 NPRSQTIDAILQLQ---NKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+L+ + GT RLL+ +++G I+G+ G I ++ + +
Sbjct: 103 KAYHLVAKGLLEGAPSVGMGGVINTSGTHPVRLLISHNQMGTIIGRAGLKIKQI--QDAS 160
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
+R+V + L P S+E IV+I+G+ E + A
Sbjct: 161 GVRMVAQKEML----PQSTERIVEIQGTPEGIEKA 191
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R +GA I + A P + M I G P+
Sbjct: 277 TQNISIPSDMVGCIIGRGGSKISEIRKSSGARISIAKA----PHDETGERMFTIMGSPSS 332
Query: 301 AKRALYEVSTLLHQNPRKDK 320
++ALY LL++N +K
Sbjct: 333 NEKALY----LLYENLEAEK 348
Score = 39.3 bits (90), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 6/59 (10%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
T + +PS VGCI+G+GG I+E+R+ + A I + A PH + E + I GS
Sbjct: 277 TQNISIPSDMVGCIIGRGGSKISEIRKSSGARISIAKA------PHDETGERMFTIMGS 329
>gi|354490191|ref|XP_003507243.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Cricetulus
griseus]
gi|344239259|gb|EGV95362.1| Poly(rC)-binding protein 2 [Cricetulus griseus]
Length = 362
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 45/216 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHS 336
+ ++ ++P K +P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 197
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K +P GS++ V I G
Sbjct: 284 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKTANPVEGSTDRQVTITG 336
Query: 539 SSEHL 543
S+ +
Sbjct: 337 SAASI 341
>gi|320583120|gb|EFW97336.1| RNA binding protein, putative [Ogataea parapolymorpha DL-1]
Length = 404
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/332 (22%), Positives = 140/332 (42%), Gaps = 47/332 (14%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSP 181
N P +R+LC + ++GK G + ++E + A++ V++ + G ERVI +
Sbjct: 74 NDDPTYVHFRMLCSINETAAIVGKGGETINRIKEMSSARVNVSENLKGIPERVITVRGPA 133
Query: 182 TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
+AK + R I ++ F ++ E+ I
Sbjct: 134 EYVAKA--------------------------FGLITRAIMDEPFNQAST---VESKQIN 164
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
+LL P+ ++G ++GKRG + + + A ++ +D++ P + TD ++ I+G +
Sbjct: 165 LKLLFPHTIIGYIIGKRGARFREIEDNSAAALKA--SDQILPAS--TDRILHITGVADAI 220
Query: 302 KRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPM---ADMHPLGNSSWPARNSS 358
A Y V+ + ++ ++ + F Y N + P P+ A GN P
Sbjct: 221 HIATYYVAQTVIEH-KQHLAKAVF---YNPANCNQPSTPVGGNASRMAYGNGYPPQVMQV 276
Query: 359 LHGMPSTPWMGG-----YGDQPSRMGSGSINSCPPGQMGEVSAE--FSMKILCSAGKIGG 411
+ +P+MG YG +G++ + P M S + + I IG
Sbjct: 277 PAPIMQSPYMGQPVQQPYGQYIPGAAAGAVAAPVPAPMQAQSGQEKINQDIYVPQMHIGL 336
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
VIGKGG N+K ++ TG + V D + ER
Sbjct: 337 VIGKGGKNLKDIRTITGCYVKVNDEVPGATER 368
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/163 (21%), Positives = 73/163 (44%), Gaps = 8/163 (4%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNPRS 458
++LCS + ++GKGG + ++++ + A ++V + ERVI E +
Sbjct: 82 FRMLCSINETAAIVGKGGETINRIKEMSSARVNVSENLKGIPERVITVRGPAEYVAKAFG 141
Query: 459 QTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGA 518
AI+ + E I +LL P + +G I+G+ G E+ + A ++
Sbjct: 142 LITRAIMDEPFNQASTVESKQINLKLLFPHTIIGYIIGKRGARFREIEDNSAAALKASDQ 201
Query: 519 RVKLQDPHPGSSECIVDIRGSSEHL-ISAHGTYQSFMTSGQSM 560
+ P S++ I+ I G ++ + I+ + Q+ + Q +
Sbjct: 202 IL------PASTDRILHITGVADAIHIATYYVAQTVIEHKQHL 238
>gi|71895775|ref|NP_001025686.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
gi|62205009|gb|AAH93475.1| neuro-oncological ventral antigen 2 [Xenopus (Silurana) tropicalis]
Length = 413
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 110/474 (23%), Positives = 195/474 (41%), Gaps = 106/474 (22%)
Query: 114 SSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGS 170
+S ++S + + ++L PS G +IGK G + L+ ET A I ++ D PG+
Sbjct: 20 TSTKRSNTAGEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGT 79
Query: 171 EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIE---EDLFG 227
ERV ++ S ++LL VH+ I E E G
Sbjct: 80 TERVCLVQGSA-----------------------------ESLLSVHNFIAEKVREVPQG 110
Query: 228 GMASD---------DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA 278
G +D N A+L+VPN G ++GK G ++ + E+GA +++
Sbjct: 111 GTKNDLGVLLPPQTTINAERAKQAKLIVPNTTAGLIIGKGGATVRSIMEESGAWVQL--- 167
Query: 279 DRLPPCAMNTDE-MVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSP 337
P N E +V +SG+P+ ++A + +++H++ R+D P + + ++ +
Sbjct: 168 -SQKPAGPNLHERVVTVSGEPSQVQKA---IRSIIHKS-REDPPQGT---THLNISYTNS 219
Query: 338 PAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQ---PSRMGSGSINSCPPGQMGEV 394
P+A+ +P G +P+ GG +Q P + + + G + +
Sbjct: 220 QGPVANSNPTG----------------SPYAGGSAEQVLTPFQPAPPAPPAITGGDLLAI 263
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
SA ++ L S G G+ GFN +H V +++ G
Sbjct: 264 SA--ALNTLASYGYSTGM----GFN------PLVGGVH--------PAAVNLLASYTGEA 303
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
P + L+ +E S G T + VP + VG ILG+GG + E + T A I+
Sbjct: 304 GPALGLGGGGILLEKMGAE-SVTGKETLEMAVPETLVGAILGKGGKTLVEYQELTGARIQ 362
Query: 515 VVGARVKLQDPHPGSSECIVDIRG------SSEHLISAHGTYQSFMTSGQSMKV 562
+ K + PG+ V I G ++++LI Y+ + S + KV
Sbjct: 363 I----SKKGEFVPGTRSRKVTITGPPGATQAAQYLIGQRVAYEQGVRSSNTQKV 412
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 106/234 (45%), Gaps = 40/234 (17%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERV--IRASAF 450
E +K+L + G +IGKGG + QLQ+ETGA+I + +D + ERV ++ SA
Sbjct: 32 GELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSA- 90
Query: 451 EGLWN------------PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQG 498
E L + P+ T + + L + + + +L+VP++ G I+G+G
Sbjct: 91 ESLLSVHNFIAEKVREVPQGGTKNDLGVLLPPQTTINAERAKQAKLIVPNTTAGLIIGKG 150
Query: 499 GHVINEMRRRTQADIRVVGARVKL-QDPH-PGSSECIVDIRGSSEHLISAHGTYQSFMTS 556
G + + + GA V+L Q P P E +V + G + A +S +
Sbjct: 151 GATVRSIMEES-------GAWVQLSQKPAGPNLHERVVTVSGEPSQVQKA---IRSIIHK 200
Query: 557 GQSMKVQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQ--SPYQ 608
+ Q +++ NI + ++ Q N N SPY +A+Q +P+Q
Sbjct: 201 SREDPPQGTTHLNI--------SYTNSQGPVANSNPTGSPYAGGSAEQVLTPFQ 246
>gi|193083110|ref|NP_001122384.1| poly(rC)-binding protein 2 isoform e [Homo sapiens]
gi|291389255|ref|XP_002711064.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
gi|348581079|ref|XP_003476305.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cavia porcellus]
gi|184186908|gb|ACC69194.1| poly(rC) binding protein 2 [Mus musculus]
gi|208967068|dbj|BAG73548.1| poly(rC) binding protein 2 [synthetic construct]
Length = 361
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 45/216 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHS 336
+ ++ ++P K +P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 197
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 283 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 335
Query: 539 SSEHL 543
S+ +
Sbjct: 336 SAASI 340
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|14141166|ref|NP_114366.1| poly(rC)-binding protein 2 isoform b [Homo sapiens]
gi|157041229|ref|NP_001096635.1| poly(rC)-binding protein 2 isoform 1 [Mus musculus]
gi|73996203|ref|XP_534789.2| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Canis lupus
familiaris]
gi|149714829|ref|XP_001504573.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Equus caballus]
gi|297692024|ref|XP_002823365.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pongo abelii]
gi|301775803|ref|XP_002923308.1| PREDICTED: poly(rC)-binding protein 2-like [Ailuropoda melanoleuca]
gi|332206039|ref|XP_003252097.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Nomascus
leucogenys]
gi|332839234|ref|XP_003313706.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Pan troglodytes]
gi|395541533|ref|XP_003772697.1| PREDICTED: poly(rC)-binding protein 2 [Sarcophilus harrisii]
gi|403296804|ref|XP_003939285.1| PREDICTED: poly(rC)-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410964553|ref|XP_003988818.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Felis catus]
gi|426224368|ref|XP_004006343.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Ovis aries]
gi|426372753|ref|XP_004053282.1| PREDICTED: poly(rC)-binding protein 2 isoform 1 [Gorilla gorilla
gorilla]
gi|2500577|sp|Q61990.1|PCBP2_MOUSE RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=CTBP; Short=CBP; AltName: Full=Putative
heterogeneous nuclear ribonucleoprotein X; Short=hnRNP X
gi|436894|gb|AAA03705.1| nucleic acid binding protein [Mus musculus]
gi|12654635|gb|AAH01155.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|13172240|gb|AAK14059.1| alpha-CP2 [Mus musculus]
gi|50925529|gb|AAH78909.1| Pcbp2 protein [Rattus norvegicus]
gi|119617113|gb|EAW96707.1| poly(rC) binding protein 2, isoform CRA_b [Homo sapiens]
gi|148672029|gb|EDL03976.1| poly(rC) binding protein 2, isoform CRA_c [Mus musculus]
gi|149031920|gb|EDL86832.1| rCG50739, isoform CRA_a [Rattus norvegicus]
gi|158257714|dbj|BAF84830.1| unnamed protein product [Homo sapiens]
Length = 362
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 45/216 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHS 336
+ ++ ++P K +P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 197
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 284 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 336
Query: 539 SSEHL 543
S+ +
Sbjct: 337 SAASI 341
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|194384644|dbj|BAG59482.1| unnamed protein product [Homo sapiens]
Length = 301
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 101/213 (47%), Gaps = 39/213 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN------- 66
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
A A + D++ EED+ M + +T RL+VP +
Sbjct: 67 -----------------AIFKAFAMIIDKL-EEDISSSMTNSTAASRPPVTLRLVVPASQ 108
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + ++
Sbjct: 109 CGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICV 164
Query: 311 LLHQNPRKD-----KP-PSSFPQAY-GGQNFHS 336
++ ++P K +P PSS P + GGQ+ +S
Sbjct: 165 VMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 197
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|126345443|ref|XP_001362482.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Monodelphis
domestica]
gi|351706147|gb|EHB09066.1| Poly(rC)-binding protein 2 [Heterocephalus glaber]
gi|440900676|gb|ELR51755.1| Poly(rC)-binding protein 2, partial [Bos grunniens mutus]
Length = 351
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 45/216 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHS 336
+ ++ ++P K +P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 197
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 284 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 336
Query: 539 SSEHL 543
S+ +
Sbjct: 337 SAASI 341
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|395826635|ref|XP_003786522.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Otolemur garnettii]
Length = 577
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 158/396 (39%), Gaps = 72/396 (18%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKI 184
D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S+P
Sbjct: 194 VDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTP--- 250
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
E +A +L++ + + D + ++
Sbjct: 251 -------------------EGCSSACKMILEIMHK----------EAKDTKTADEVPLKI 281
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L NN VG L+GK G ++++ +T I + L N + + + G RA
Sbjct: 282 LAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIENCCRA 339
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPS 364
E+ + + D S Q+ P +A + SS +
Sbjct: 340 EQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPSSVTGA 393
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQ 424
P+ S P +M +++ A +G +IGK G ++KQL
Sbjct: 394 APY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQHIKQLS 432
Query: 425 QETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EKGT 479
+ ASI + AP ++ + +R G P A ++ K E + E+
Sbjct: 433 RFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGPKEEVK 487
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 488 LETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
>gi|119615102|gb|EAW94696.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_b
[Homo sapiens]
Length = 463
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 159/398 (39%), Gaps = 72/398 (18%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPT 182
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S+P
Sbjct: 78 QQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTP- 136
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
E +A +L++ + + D +
Sbjct: 137 ---------------------EGCSSACKMILEIMHK----------EAKDTKTADEVPL 165
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 166 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIENCC 223
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
RA E+ + + D S Q+ P +A + SS
Sbjct: 224 RAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPSSVT 277
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+ P+ S P +M +++ A +G +IGK G ++KQ
Sbjct: 278 GAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQHIKQ 316
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EK 477
L + ASI + AP ++ + +R G P A ++ K E + E+
Sbjct: 317 LSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGPKEE 371
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 372 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 409
>gi|218190341|gb|EEC72768.1| hypothetical protein OsI_06421 [Oryza sativa Indica Group]
Length = 658
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 110/235 (46%), Gaps = 32/235 (13%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVI 175
S+G Q T I P+ ++G +IGK+G +K+L+ ++ AKI V D +PGS+ R +
Sbjct: 95 SYGGYQ--GTSKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPV 152
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN 235
+ +P +I++ + ++ AE S + + K + D F
Sbjct: 153 ELSGTPDQISRAEQLINEVLAEADAAS-----SGNLSSRKYNAPQPGADQF--------- 198
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
++ + NN VG ++GK G+ I+ +++++GA I+V+P LPP T+ V I
Sbjct: 199 -------QMKIANNKVGLVIGKGGETIKSMQAKSGARIQVVPL-HLPPGDPATERTVYID 250
Query: 296 GKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNS 350
G + A V + +N R P S Y Q + PP P ++ P G +
Sbjct: 251 GTQEQIETAKQLVIEVTSEN-RARNPMSG---GYSQQGYR-PPRPQSNWGPHGGA 300
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIRASAFEGLWN 455
S I G++G +IGK G +K LQ ++GA I V DA S R + S +
Sbjct: 103 SKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQIS 162
Query: 456 PRSQTIDAIL---------QLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMR 506
Q I+ +L L ++ + G ++ + ++KVG ++G+GG I M+
Sbjct: 163 RAEQLINEVLAEADAASSGNLSSRKYNAPQPGADQFQMKIANNKVGLVIGKGGETIKSMQ 222
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
++ A I+VV + DP ++E V I G+ E + +A
Sbjct: 223 AKSGARIQVVPLHLPPGDP---ATERTVYIDGTQEQIETA 259
>gi|354490195|ref|XP_003507245.1| PREDICTED: poly(rC)-binding protein 2 isoform 3 [Cricetulus
griseus]
Length = 349
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 45/216 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHS 336
+ ++ ++P K +P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 197
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 112/280 (40%), Gaps = 68/280 (24%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIY----------------------------------S 179
E T A++ VA D +P S ER I I S
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSS 184
Query: 180 SPTKIAKTQNK---DDDSAA---ETKKESMEP---------------HCAAQDALLKVHD 218
SP A Q++ DSA+ T + P + Q L K+H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 219 RIIEEDLF------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
+++ F G ++ D T + L +PN+++GC++G++G I +R +GA
Sbjct: 245 LAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQ 304
Query: 273 IRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
I+ P +TD V I+G A Y ++ L
Sbjct: 305 IKT-----ANPVEGSTDRQVTITGSAASISLAQYLINVRL 339
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
Score = 39.7 bits (91), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K +P GS++ V I G
Sbjct: 271 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKTANPVEGSTDRQVTITG 323
Query: 539 SSEHL 543
S+ +
Sbjct: 324 SAASI 328
>gi|291409711|ref|XP_002721142.1| PREDICTED: poly(rC) binding protein 2-like isoform 1 [Oryctolagus
cuniculus]
Length = 362
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 39/213 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN------- 66
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
A A + D++ EED+ M + +T RL+VP +
Sbjct: 67 -----------------AIFKAFAMIIDKL-EEDISSSMTNSTAASRPLVTLRLVVPASQ 108
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 109 CGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKHICV 164
Query: 311 LLHQNPRKD-----KP-PSSFPQAY-GGQNFHS 336
++ ++P K +P PSS P + GGQ+ +S
Sbjct: 165 VMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 197
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPLVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
D N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 7 DGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|119615099|gb|EAW94693.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615100|gb|EAW94694.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
gi|119615101|gb|EAW94695.1| insulin-like growth factor 2 mRNA binding protein 1, isoform CRA_a
[Homo sapiens]
Length = 441
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 86/398 (21%), Positives = 159/398 (39%), Gaps = 72/398 (18%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPT 182
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S+P
Sbjct: 56 QQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTP- 114
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
E +A +L++ + + D +
Sbjct: 115 ---------------------EGCSSACKMILEIMHK----------EAKDTKTADEVPL 143
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 144 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIENCC 201
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
RA E+ + + D S Q+ P +A + SS
Sbjct: 202 RAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPSSVT 255
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+ P+ S P +M +++ A +G +IGK G ++KQ
Sbjct: 256 GAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQHIKQ 294
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EK 477
L + ASI + AP ++ + +R G P A ++ K E + E+
Sbjct: 295 LSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGPKEE 349
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 350 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 387
>gi|62087230|dbj|BAD92062.1| poly(rC)-binding protein 2 isoform b variant [Homo sapiens]
Length = 373
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 45/216 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 29 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 77
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 78 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 117
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 118 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQ 173
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHS 336
+ ++ ++P K +P PSS P + GGQ+ +S
Sbjct: 174 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 209
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 20 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 77
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 78 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 135
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 136 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 168
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 295 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 347
Query: 539 SSEHL 543
S+ +
Sbjct: 348 SAASI 352
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 23 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 61
>gi|77736367|ref|NP_001029883.1| poly(rC)-binding protein 2 [Bos taurus]
gi|157057549|ref|NP_035172.2| poly(rC)-binding protein 2 isoform 2 [Mus musculus]
gi|291389257|ref|XP_002711065.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
gi|348581077|ref|XP_003476304.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Cavia porcellus]
gi|426224370|ref|XP_004006344.1| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Ovis aries]
gi|74268197|gb|AAI03398.1| Poly(rC) binding protein 2 [Bos taurus]
gi|119617114|gb|EAW96708.1| poly(rC) binding protein 2, isoform CRA_c [Homo sapiens]
gi|148672028|gb|EDL03975.1| poly(rC) binding protein 2, isoform CRA_b [Mus musculus]
gi|149031923|gb|EDL86835.1| rCG50739, isoform CRA_d [Rattus norvegicus]
gi|296487920|tpg|DAA30033.1| TPA: poly(rC) binding protein 2 [Bos taurus]
Length = 349
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 45/216 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHS 336
+ ++ ++P K +P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 197
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 113/280 (40%), Gaps = 68/280 (24%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIY----------------------------------S 179
E T A++ VA D +P S ER I I S
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSS 184
Query: 180 SPTKIAKTQNK---DDDSAA---ETKKESMEP---------------HCAAQDALLKVHD 218
SP A Q++ DSA+ T + P + Q L K+H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 219 RIIEEDLF------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
+++ F G ++ D T + L +PN+++GC++G++G I +R +GA
Sbjct: 245 LAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQ 304
Query: 273 IRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
I++ P +TD V I+G A Y ++ L
Sbjct: 305 IKI-----ANPVEGSTDRQVTITGSAASISLAQYLINVRL 339
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 271 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 323
Query: 539 SSEHL 543
S+ +
Sbjct: 324 SAASI 328
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|426258298|ref|XP_004022751.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Ovis
aries]
Length = 330
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 92/370 (24%), Positives = 148/370 (40%), Gaps = 76/370 (20%)
Query: 113 NSSREQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS 170
+ EQ+F S+ D + RIL S+ G VIGK G +K+LR + A ++V D+
Sbjct: 30 DMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SG 87
Query: 171 EERVIIIYSSPTKIAKTQNKDDDSAAETKKESME---PHCAAQDALLKVHDRIIEEDLFG 227
ER++ I + I + K T +E ++ P +Q L + +
Sbjct: 88 PERILSISADIETIGEILKK----IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK 143
Query: 228 GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMN 287
G SD D E RLL+ ++ G ++G +G I+ LR T I++ C +
Sbjct: 144 G--SDFDCE-----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPQS 192
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPL 347
TD +V I GKP+ + + L+ ++P K + P Y + M D
Sbjct: 193 TDRVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFYDETYDYGGFTMMFD---- 248
Query: 348 GNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAG 407
G P M G D +GSI
Sbjct: 249 ----------DRRGRPVGFPMRGREDL-----AGSI------------------------ 269
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
IGKGG +KQ++ E+GASI +++ S++R+I + + Q +A L
Sbjct: 270 -----IGKGGQRIKQIRHESGASIKIDEPLEGSEDRIIT------ITGTQDQIQNAQYLL 318
Query: 468 QNKTSEFSEK 477
QN ++S K
Sbjct: 319 QNSVKQYSGK 328
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA---------- 449
++IL + G VIGKGG N+K L+ + AS+ V D+ ER++ SA
Sbjct: 49 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERILSISADIETIGEILK 106
Query: 450 ------FEGLWNP----------RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGC 493
EGL P S ++ + K S+F RLL+ S G
Sbjct: 107 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD----CELRLLIHQSLAGG 162
Query: 494 ILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I+G G I E+R TQ I++ Q+ P S++ +V I G + ++
Sbjct: 163 IIGVKGAKIKELRENTQTTIKL------FQECCPQSTDRVVLIGGKPDRVV 207
>gi|357137683|ref|XP_003570429.1| PREDICTED: RNA-binding protein Nova-1-like [Brachypodium
distachyon]
Length = 349
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 133/315 (42%), Gaps = 57/315 (18%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKI 184
T R L + G +IGK G+ + + ++ A+I ++ + PG+ +R+I++
Sbjct: 46 THLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMV------- 98
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
D ++K + ++E+ L G ++ RL
Sbjct: 99 ----------------------SGLFDEVIKAMELVLEKLLAEGEEFNEAEARPKF--RL 134
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
+VPN+ G ++GK G I+ ++ A I++ P D D +V I+G N RA
Sbjct: 135 VVPNSSCGGIIGKGGATIKAFIEDSHAGIKISPQDNN--FVGLHDRLVTITGPFNNQMRA 192
Query: 305 LYEVSTLLHQNPRKDKPPS-SFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
+Y + + L ++ PP+ S P Y G F S PAP+ P+G + +P
Sbjct: 193 IYLILSKLSED--VHYPPNLSSPFPYAGLGFPSYPAPV----PVG-----------YMIP 235
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQM---GEVSAEFSMKILCSAGKIGGVIGKGGFNV 420
P+ P+ G N+ P + A+ S I + IG V+G+ G N+
Sbjct: 236 QVPYNNAVNYGPNGYGGRYQNNKPGTPVRSPATNDAQESHTIGVADEHIGAVVGRAGRNI 295
Query: 421 KQLQQETGASIHVED 435
++ Q +GA I + D
Sbjct: 296 TEIIQASGARIKISD 310
Score = 52.8 bits (125), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 64/122 (52%), Gaps = 10/122 (8%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV----EDAPTDSDERVIRASAFEGLWN 455
++ L S G +IGKGG + Q ++GA I + E P +D R+I S GL++
Sbjct: 48 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTND-RIIMVS---GLFD 103
Query: 456 PRSQTIDAILQ-LQNKTSEFSE-KGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ ++ +L+ L + EF+E + RL+VP+S G I+G+GG I + A I
Sbjct: 104 EVIKAMELVLEKLLAEGEEFNEAEARPKFRLVVPNSSCGGIIGKGGATIKAFIEDSHAGI 163
Query: 514 RV 515
++
Sbjct: 164 KI 165
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 39/67 (58%), Gaps = 10/67 (14%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPH---PGSSECIVDIRGS 539
R LV ++ GCI+G+GG IN+ + ++ GAR++L H PG+++ I+ + G
Sbjct: 49 RFLVSNTAAGCIIGKGGSTINDFQSQS-------GARIQLSRSHEFFPGTNDRIIMVSGL 101
Query: 540 SEHLISA 546
+ +I A
Sbjct: 102 FDEVIKA 108
Score = 39.3 bits (90), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
+DD E T R LV N GC++GK G I +S++GA I++ + P D +
Sbjct: 39 EDDKEKPT-HLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPG--TNDRI 95
Query: 292 VQISG 296
+ +SG
Sbjct: 96 IMVSG 100
>gi|1360003|emb|CAA66619.1| nuclear poly(C)-binding protein, splicevariant E [Mus musculus]
Length = 349
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 45/216 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHS 336
+ ++ ++P K +P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 197
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 113/280 (40%), Gaps = 68/280 (24%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIY----------------------------------S 179
E T A++ VA D +P S ER I I S
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSS 184
Query: 180 SPTKIAKTQNK---DDDSAA---ETKKESMEP---------------HCAAQDALLKVHD 218
SP A Q++ DSA+ T S+ P + Q L K+H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMSLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 219 RIIEEDLF------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
+++ F G ++ D T + L +PN+++GC++ ++G I +R +GA
Sbjct: 245 LAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIRRQGAKINEIRQMSGAQ 304
Query: 273 IRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
I++ P +TD V I+G A Y ++ L
Sbjct: 305 IKI-----ANPVEGSTDRQVTITGSAASISLAQYLINVRL 339
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|48716278|dbj|BAD22893.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
gi|48716520|dbj|BAD23125.1| KH domain-containing protein NOVA-like [Oryza sativa Japonica
Group]
Length = 343
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 58/315 (18%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKI 184
T R L + G +IGK G+ + + ++ A+I ++ + PG+ +R+I++
Sbjct: 41 THLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMV------- 93
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
D ++K + I+E+ L G S++ + RL
Sbjct: 94 ----------------------SGLFDEVIKAMELILEKLLAEGEESNEAEARPKV--RL 129
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
+VPN+ G ++GK G I+ ++ A I++ P D D +V ++G + RA
Sbjct: 130 VVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDN--NFVGLHDRLVTVTGPLDHQMRA 187
Query: 305 LYEVSTLLHQNPRKDKPPS-SFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
+Y + + L ++ PP+ S P Y G F S P P+G + +P
Sbjct: 188 IYLILSKLSEDVH--YPPNLSSPFPYAGLGFPSYPGV-----PVG-----------YMIP 229
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQM---GEVSAEFSMKILCSAGKIGGVIGKGGFNV 420
P+ P+ G N+ P M A+ S+ I + IG V+G+ G N+
Sbjct: 230 QVPYNNAVNYGPNGYGGRYQNNKPSTPMRSPANNDAQDSLTIGIADEHIGAVVGRAGRNI 289
Query: 421 KQLQQETGASIHVED 435
++ Q +GA I + D
Sbjct: 290 TEIIQASGARIKISD 304
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV----EDAPTDSDERVIRASAFEGLWN 455
++ L S G +IGKGG + + Q ++GA I + E P +D ++ + F+ +
Sbjct: 43 LRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIK 102
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
++ +L +++E + + RL+VP+S G I+G+GG I + A I++
Sbjct: 103 AMELILEKLLAEGEESNEAEARPKV--RLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKI 160
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 10/67 (14%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPH---PGSSECIVDIRGS 539
R LV ++ GCI+G+GG INE + ++ GAR++L H PG+++ I+ + G
Sbjct: 44 RFLVSNTAAGCIIGKGGSTINEFQSQS-------GARIQLSRSHEFFPGTNDRIIMVSGL 96
Query: 540 SEHLISA 546
+ +I A
Sbjct: 97 FDEVIKA 103
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
+DD E T R LV N GC++GK G I +S++GA I++ + P D +
Sbjct: 34 EDDKEKPT-HLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPG--TNDRI 90
Query: 292 VQISG 296
+ +SG
Sbjct: 91 IMVSG 95
>gi|126345445|ref|XP_001362564.1| PREDICTED: poly(rC)-binding protein 2-like isoform 2 [Monodelphis
domestica]
Length = 338
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 45/216 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHS 336
+ ++ ++P K +P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 197
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 112/278 (40%), Gaps = 68/278 (24%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIY----------------------------------S 179
E T A++ VA D +P S ER I I S
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSS 184
Query: 180 SPTKIAKTQNK---DDDSAA---ETKKESMEP---------------HCAAQDALLKVHD 218
SP A Q++ DSA+ T + P + Q L K+H
Sbjct: 185 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 244
Query: 219 RIIEEDLF------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
+++ F G ++ D T + L +PN+++GC++G++G I +R +GA
Sbjct: 245 LAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQ 304
Query: 273 IRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
I++ P +TD V I+G A Y ++
Sbjct: 305 IKI-----ANPVEGSTDRQVTITGSAASISLAQYLINV 337
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 271 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 323
Query: 539 SSEHL 543
S+ +
Sbjct: 324 SAASI 328
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|297262518|ref|XP_001105618.2| PREDICTED: poly(rC)-binding protein 2 isoform 2 [Macaca mulatta]
Length = 335
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 82/338 (24%), Positives = 143/338 (42%), Gaps = 76/338 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIE--EDLFGG-MASDDDNENSTITARLLVP 247
+A+ K II+ E++F M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEVFSSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKDKP----------PSSFP------QAYGGQNFHSPPAP-MADMHPLG-- 348
+ ++ + + P PSS P QAY Q ++ P P + +H L
Sbjct: 162 ICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQ 221
Query: 349 NSSWPAR--NSSLHGMP-STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCS 405
S +P N+ G+ S+P + GY + + S ++
Sbjct: 222 QSHFPMTHGNTGFSGIESSSPEVKGYW----------------AGLDASAQTTSHELTIP 265
Query: 406 AGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
IG +IG+ G + +++Q +GA I + + S +R
Sbjct: 266 NDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 303
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 114/247 (46%), Gaps = 33/247 (13%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIIT----- 60
Query: 452 GLWNPRSQTIDAILQLQNKTSE-FSEKGT---------ITTRLLVPSSKVGCILGQGGHV 501
L P + A + +K E FS T +T RL+VP+S+ G ++G+GG
Sbjct: 61 -LAGPTNAIFKAFAMIIDKLEEVFSSSMTNSTAASRPPVTLRLVVPASQCGSLIGKGGCK 119
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMK 561
I E+R T A ++V G D P S+E + I G + +I Q + +++
Sbjct: 120 IKEIRESTGAQVQVAG------DMLPNSTERAITIAGIPQSIIEC--VKQICVVMLETLS 171
Query: 562 VQPSSYQNI--NPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSYPM 619
P I P+ SS + + +Y T Q Y + + QQS +PM
Sbjct: 172 QSPPKGVTIPYRPKPSSSPVIFAGGQAY----TIQGQYAIPQPDLTKLHQLAMQQSHFPM 227
Query: 620 HTHQGAG 626
TH G
Sbjct: 228 -THGNTG 233
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 107/266 (40%), Gaps = 54/266 (20%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEVFSSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKES----------- 202
E T A++ VA D +P S ER I I P I + + ET +S
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 203 -----------------MEPHCAAQDALLKVHDRIIEEDLF---------GGMASDD--- 233
+ Q L K+H +++ F G+ S
Sbjct: 185 KPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEV 244
Query: 234 -------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
D T + L +PN+++GC++G++G I +R +GA I++ P
Sbjct: 245 KGYWAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI-----ANPVEG 299
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLL 312
+TD V I+G A Y ++ L
Sbjct: 300 STDRQVTITGSAASISLAQYLINVRL 325
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 257 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 309
Query: 539 SSEHL 543
S+ +
Sbjct: 310 SAASI 314
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|413935391|gb|AFW69942.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 468
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 37/200 (18%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI--PGSEERVIIIYSSPT 182
P +V+R++ P+ K+GG+IG+ G+ +K L +ET+A++ V D G+ R++++
Sbjct: 95 PGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLV----- 149
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
SA E + + P A +A +K+ I E +D N + T+ A
Sbjct: 150 -----------SAREEVEAELSP---AMNAAIKIFKHINE--------IEDINSDGTLMA 187
Query: 243 --------RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
RLLVP ++GK+G I+ ++ TG+ +R++ D L + +V+I
Sbjct: 188 PAPEISSVRLLVPFAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEI 247
Query: 295 SGKPNVAKRALYEVSTLLHQ 314
+G AL V LL +
Sbjct: 248 NGASLEVLNALKLVLGLLRK 267
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 83/160 (51%), Gaps = 15/160 (9%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP--TDSDERVIRASAFEGLWNPR 457
+++ A K+GG+IG+ G +K+L ET A + V DAP + R++ SA E +
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSAREEVEAEL 159
Query: 458 SQTIDAILQL---QNKTSEFSEKGTI--------TTRLLVPSSKVGCILGQGGHVINEMR 506
S ++A +++ N+ + + GT+ + RLLVP ++ ++G+ G I ++
Sbjct: 160 SPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSIQ 219
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
T + +R++ L H E IV+I G+S +++A
Sbjct: 220 ESTGSTVRIMDEDELLS--HETMGERIVEINGASLEVLNA 257
>gi|242024312|ref|XP_002432572.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
gi|212518032|gb|EEB19834.1| heterogeneous nuclear ribonucleoprotein k, putative [Pediculus
humanus corporis]
Length = 365
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 83/188 (44%), Gaps = 47/188 (25%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L PS+ G +IGK G+ + LR E A +TV D PG E R++ +
Sbjct: 26 RLLIPSKVAGSIIGKGGHNISKLRTEHNASVTVPDC-PGPE-RILTV------------- 70
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
A D +L+V I+ N I R+LV +
Sbjct: 71 ----------------AADLDTMLRVVSEILP------------NLEDVIDIRMLVHQSQ 102
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
GC++GK G I+ LR +TGA I++ C +TD +VQI+GK N+ A+ E
Sbjct: 103 AGCIIGKGGLKIKELREKTGARIKIYSN----CCPQSTDRIVQINGKGNLCVDAIRECME 158
Query: 311 LLHQNPRK 318
LL +P K
Sbjct: 159 LLKTSPIK 166
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 21/148 (14%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++L + G +IGKGG N+ +L+ E AS+ V D P ER++ +A
Sbjct: 25 IRLLIPSKVAGSIIGKGGHNISKLRTEHNASVTVPDCP--GPERILTVAA---------- 72
Query: 460 TIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGAR 519
+D +L++ ++ E I R+LV S+ GCI+G+GG I E+R +T GAR
Sbjct: 73 DLDTMLRVVSEILPNLED-VIDIRMLVHQSQAGCIIGKGGLKIKELREKT-------GAR 124
Query: 520 VKL-QDPHPGSSECIVDIRGSSEHLISA 546
+K+ + P S++ IV I G + A
Sbjct: 125 IKIYSNCCPQSTDRIVQINGKGNLCVDA 152
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ 188
++ P G +IGK G+ ++ +R E+ A IT+ + +PGS +R+I I +P +I Q
Sbjct: 294 QVTIPKDLAGAIIGKGGSRIRKIRMESGAAITIDEPLPGSNDRIITISGTPNQIQMAQ 351
>gi|391338059|ref|XP_003743379.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Metaseiulus occidentalis]
Length = 707
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 108/489 (22%), Positives = 187/489 (38%), Gaps = 138/489 (28%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT------IPGSEER 173
G+ P + R+L PS +G +IGK+G + S+ +++QAK+ V G ++
Sbjct: 187 VGHPPPKELPVRMLVPSEMVGAIIGKSGATITSITQQSQAKVEVNKKNAGGIFADGQVDK 246
Query: 174 VIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD 233
VI I+ + +++ ++ K +E +L+ + + GG +
Sbjct: 247 VINIHGT-----------NEACSQACKRILE-------VMLQESQQPATNTMNGGTSRRR 288
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVL----PADRLPPCAMNTD 289
D IT RLL NN+VG ++G+ G VI+++ ET A I V P +R+ N +
Sbjct: 289 D---EPITLRLLAHNNLVGRVIGRSGIVIKKIMEETNAKINVSQMTDPRERVIVIRGNLE 345
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPM-------- 341
EM + + R YE L Q + YGG + PP +
Sbjct: 346 EMSKAQQQITSKMRQCYEQD--LQQ---------AMMGGYGGPDLGPPPQQIPPALSYPF 394
Query: 342 -------------ADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPP 388
+ S G P P+ R+G S P
Sbjct: 395 HRPPLPPPPPITHPYHGGPNGHHGGPHHPSSFGPPGGPY--------GRIGM----SSPS 442
Query: 389 GQ---MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE----------- 434
G MG+ S E + + + +G +IG GG +++++ + +G SI V
Sbjct: 443 GHFYPMGDGSVEVA-HVWVPSCTVGAIIGTGGSSIREMIRASGCSIKVSQTNAKDEKKTK 501
Query: 435 ---------------DAPTD------------------------SDERVIRASAFEGLWN 455
D+P+ SD RV + E W
Sbjct: 502 IDESVAKQNGSENPGDSPSSSSVATEGGHSTKRDGGSVASLPNPSDRRVTVTGSGEAQWK 561
Query: 456 P-----RSQTIDAI--LQLQNKTSEFS--EKGTITTRLLVPSSKVGCILGQGGHVINEMR 506
R ++A+ L L S ++G + + VPS++VG I+G+GG + +M+
Sbjct: 562 AQCLLYRKVFMEAVQHLDLNPDVSNDPQIQQGHLRIEINVPSNQVGRIIGRGGSTVKDMQ 621
Query: 507 RRTQADIRV 515
R++ A I++
Sbjct: 622 RQSGAIIKL 630
>gi|444727083|gb|ELW67590.1| Insulin-like growth factor 2 mRNA-binding protein 3 [Tupaia
chinensis]
Length = 644
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/382 (22%), Positives = 150/382 (39%), Gaps = 87/382 (22%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIII 177
S +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I I
Sbjct: 255 SVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKSITI 314
Query: 178 YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN 237
S+P E AA ++L++ + + D
Sbjct: 315 LSTP----------------------EGTSAACKSILEIMYK----------EAQDIKFT 342
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
I ++L NN VG L+GK G ++++ +T I + P L N + + + G
Sbjct: 343 EEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGN 400
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
+A E+ + + S+ N + P +++ LG +P +
Sbjct: 401 VETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG--LFPPTS- 448
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
G+P P G PS M PP E S ++ + A +G +IGK G
Sbjct: 449 ---GIP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSVGAIIGKQG 493
Query: 418 FNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEK 477
++KQL + GASI + R+ E +P+ E+
Sbjct: 494 QHIKQLSRFAGASIKAQG-------RIYGKIKEENFVSPK------------------EE 528
Query: 478 GTITTRLLVPSSKVGCILGQGG 499
+ + VPS G ++G+GG
Sbjct: 529 VKLEAHIRVPSFAAGRVIGKGG 550
>gi|432873594|ref|XP_004072294.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Oryzias
latipes]
Length = 433
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 108/451 (23%), Positives = 181/451 (40%), Gaps = 74/451 (16%)
Query: 113 NSSREQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS 170
++ +SF S+ +D + RIL S+ G VIGK G +K+LR + A ++V D+
Sbjct: 26 DADEHKSFKRSRNSDEMVELRILLQSKNAGAVIGKGGKNIKALRSDYNASVSVPDS---- 81
Query: 171 EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMA 230
S P +I + D ++ E LLK+ + E + GM
Sbjct: 82 --------SGPERILSI-SADIETVGEI--------------LLKIIPTLEEYQQYNGMD 118
Query: 231 SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE 290
D RLL+ ++ G ++G +G I+ LR T +I++ C +TD
Sbjct: 119 FD-------CELRLLIHQSLAGSIIGVKGAKIKELRENTKTSIKLFQE----CCPQSTDR 167
Query: 291 MVQISGKPNVAKRALYEVSTLLHQNPRKDK----PPSSFPQAYGGQNFHSPPAPMADMHP 346
+V + GK + + L+ + P K + P+ + + Y F
Sbjct: 168 VVLVGGKSERVVECVKTMLELISEAPIKGRTQPYDPNFYDETYEYGGFTMFEERGGGRRL 227
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQP-SRMGSGSINSCPPGQMGEVSAEFSMKILCS 405
+G S+P R S G GY P SR+G G + PP + + S +
Sbjct: 228 MG--SFPMRGSRSSGDR------GYDRMPSSRVGRGPL---PPSRRD--YDDISPRRGPP 274
Query: 406 AGKIGGVIGKGG--FNVKQLQQETGASIHVEDAPTDSDERV-IRASAFEGLWNPRSQTID 462
V+ G N+ G D+ SDER R S + + S D
Sbjct: 275 PPHHSRVVRPSGRSRNMPMGHPHRGGDDRYYDSYRGSDERSNDRRSRPDRYGDNMSGGYD 334
Query: 463 AILQLQNKTS----EFSEKG--TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ S +S+ G ITT++ +P G I+G+GG I ++R +
Sbjct: 335 NSSSWDSYQSGGRGSYSDMGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHES------- 387
Query: 517 GARVKLQDPHPGSSECIVDIRGSSEHLISAH 547
GA +K+ +P GS + I+ I G+ + + +A
Sbjct: 388 GASIKIDEPLEGSEDRIITITGTQDQIQNAQ 418
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GG S D IT ++ +P ++ G ++GK G I+++R E+GA+I++ P
Sbjct: 345 GGRGSYSDMGGPVITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEG 399
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+ D ++ I+G + + A Y + + Q
Sbjct: 400 SEDRIITITGTQDQIQNAQYLLQNSVKQ 427
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 6/66 (9%)
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGKGG +KQ++ E+GASI +++ S++R+I + + Q +A LQN
Sbjct: 370 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQN 423
Query: 470 KTSEFS 475
++S
Sbjct: 424 SVKQYS 429
>gi|302697985|ref|XP_003038671.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
gi|300112368|gb|EFJ03769.1| hypothetical protein SCHCODRAFT_80836 [Schizophyllum commune H4-8]
Length = 308
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/318 (26%), Positives = 131/318 (41%), Gaps = 71/318 (22%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R L ++ G +IGK G V LRE T K V+ +PG ERV+ I SP IAK
Sbjct: 3 LRALVSTKDAGVIIGKGGKNVAELREVTGVKAGVSKVVPGVHERVLTINGSPEGIAKAYQ 62
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA------R 243
H AQ L A + + S + R
Sbjct: 63 ----------------HIIAQ--------------LVSASAGSPELDASVVATNPHTMIR 92
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
LLV +N++G ++G+ G I+ ++ +GA + V D LP +T+ +V++ G P+ R
Sbjct: 93 LLVSHNLMGTIIGRGGLKIKAIQDASGARL-VAQKDMLP---QSTERVVEVHGVPDEIGR 148
Query: 304 ALYEVS-TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWP-ARNSSLHG 361
A+YE+S +LL R PQA + + A P N P AR ++
Sbjct: 149 AIYEISKSLLEDWERNTGTVLYHPQA-------AEASGAAARRPSTNGFSPGARRRAISP 201
Query: 362 MPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVK 421
PS G Q S P + + I + +G +IG+GG +
Sbjct: 202 TPSA------GSQ----------STPNALI------RTQNISIPSDMVGCIIGRGGTKIT 239
Query: 422 QLQQETGASIHVEDAPTD 439
++++ +G+ I + AP D
Sbjct: 240 EIRRLSGSKISIAKAPHD 257
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 87/194 (44%), Gaps = 19/194 (9%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKIAK 186
T+ R+L +G +IG+ G +K++++ + A++ D +P S ERV+ ++ P +I +
Sbjct: 89 TMIRLLVSHNLMGTIIGRGGLKIKAIQDASGARLVAQKDMLPQSTERVVEVHGVPDEIGR 148
Query: 187 TQNKDDDSAAETKKE---SMEPHCAAQDALLKVHDRIIEEDLFGGM----------ASDD 233
+ S E + ++ H A +A R G A
Sbjct: 149 AIYEISKSLLEDWERNTGTVLYHPQAAEASGAAARRPSTNGFSPGARRRAISPTPSAGSQ 208
Query: 234 DNENSTI-TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
N+ I T + +P++MVGC++G+ G I +R +G+ I + A P + M
Sbjct: 209 STPNALIRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKA----PHDETGERMF 264
Query: 293 QISGKPNVAKRALY 306
I G P ++ALY
Sbjct: 265 TIVGSPEANEKALY 278
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 67/148 (45%), Gaps = 14/148 (9%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF-EGLWNP 456
+++ L S G +IGKGG NV +L++ TG V ERV+ + EG+
Sbjct: 1 MALRALVSTKDAGVIIGKGGKNVAELREVTGVKAGVSKVVPGVHERVLTINGSPEGIAKA 60
Query: 457 RSQTIDAILQLQNKTSEFSEKGTIT-----TRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
I ++ + E T RLLV + +G I+G+GG I ++ +
Sbjct: 61 YQHIIAQLVSASAGSPELDASVVATNPHTMIRLLVSHNLMGTIIGRGGLKIKAIQDAS-- 118
Query: 512 DIRVVGARVKLQ-DPHPGSSECIVDIRG 538
GAR+ Q D P S+E +V++ G
Sbjct: 119 -----GARLVAQKDMLPQSTERVVEVHG 141
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 88/224 (39%), Gaps = 51/224 (22%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE-DAPTDSDERVIRA----------- 447
+++L S +G +IG+GG +K +Q +GA + + D S ERV+
Sbjct: 91 IRLLVSHNLMGTIIGRGGLKIKAIQDASGARLVAQKDMLPQSTERVVEVHGVPDEIGRAI 150
Query: 448 -----SAFEG--------LWNPRSQTIDAILQLQNKTSEFS---EKGTI----------- 480
S E L++P++ + T+ FS + I
Sbjct: 151 YEISKSLLEDWERNTGTVLYHPQAAEASGAAARRPSTNGFSPGARRRAISPTPSAGSQST 210
Query: 481 ------TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIV 534
T + +PS VGCI+G+GG I E+RR + + I + A PH + E +
Sbjct: 211 PNALIRTQNISIPSDMVGCIIGRGGTKITEIRRLSGSKISIAKA------PHDETGERMF 264
Query: 535 DIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQNINPQQSSCQ 578
I GS E A + + S + +V QN+ Q Q
Sbjct: 265 TIVGSPEANEKALYLLYNQLESEKERRVGREQSQNVAMQTDDDQ 308
>gi|451847129|gb|EMD60437.1| hypothetical protein COCSADRAFT_99089 [Cochliobolus sativus ND90Pr]
Length = 364
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 143/326 (43%), Gaps = 44/326 (13%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A R + S++ G +IGKAG V LR+ET + V+ + G +RV+ + S + I+
Sbjct: 43 AQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSGIS 102
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
K + A LL+ + GG+ D T RLL
Sbjct: 103 KA------------------YGLAAKGLLEGAPAM----GMGGVIRTD----GTHPIRLL 136
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+ +N +G ++G++G I++++ +G +R++ + P +T+ +V++ G P ++A+
Sbjct: 137 ISHNQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLP--QSTERVVEVQGSPAGIEKAV 192
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSP-PAPMADMHPLGNSSWPARNSSLHGMPS 364
+E+ L + + + A Q P PA P G + N + HG
Sbjct: 193 WEIGKCLIDDHERGYGTVLYNPAVRVQPGVGPGPAANGGSAPAGGMGGRSYNRTGHGAD- 251
Query: 365 TPWMGGYGDQP----SRMGSGSINSCPPGQMGEVSAEF-SMKILCSAGKIGGVIGKGGFN 419
+ D P R GS + + PP E E + I + +G +IG+GG
Sbjct: 252 ------FSDSPPAFSRRSGSDAASRPPPPTHTEDGEEMQTQNISIPSDMVGCIIGRGGSK 305
Query: 420 VKQLQQETGASIHVEDAP-TDSDERV 444
+ ++++ + A I + AP D+ ER+
Sbjct: 306 ISEIRKTSNARISIAKAPHDDTGERM 331
Score = 45.8 bits (107), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLW 454
A+ +++ + S+ + G +IGK G NV L+ ETG V +RV+ + + G+
Sbjct: 43 AQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSGIS 102
Query: 455 NPRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+L+ GT RLL+ +++G I+G+ G I ++ + +
Sbjct: 103 KAYGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKIKQI--QDAS 160
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGS 539
+R+V + L P S+E +V+++GS
Sbjct: 161 GVRMVAQKEML----PQSTERVVEVQGS 184
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R + A I + A P + M I+G +
Sbjct: 285 TQNISIPSDMVGCIIGRGGSKISEIRKTSNARISIAKA----PHDDTGERMFTITGSASA 340
Query: 301 AKRALYEVSTLLHQNPRKDK 320
++ALY LL++N +K
Sbjct: 341 NEKALY----LLYENLEAEK 356
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +PS VGCI+G+GG I+E+R+ + A I + A PH + E + I GS+
Sbjct: 285 TQNISIPSDMVGCIIGRGGSKISEIRKTSNARISIAKA------PHDDTGERMFTITGSA 338
>gi|348562599|ref|XP_003467097.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1-like
[Cavia porcellus]
Length = 599
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 88/403 (21%), Positives = 158/403 (39%), Gaps = 77/403 (19%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 212 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 271
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E C R+I E + + D
Sbjct: 272 TP-------------------EGCSSAC-----------RMILEIMH--KEAKDTKTADE 299
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 300 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTDTKITISSLQDL--TLYNPERTITVKGAIE 357
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S L + P N +
Sbjct: 358 NCCRAEQEIMKKVREAYENDVAAMS----------------------LQSHLIPGLNLAA 395
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINS--CPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
G+ S G+ +S P +M +++ A +G +IGK G
Sbjct: 396 VGLFPASSSAVPPPPSSVTGAAPYSSFMAPEQEM--------VQVFIPAQAVGAIIGKKG 447
Query: 418 FNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-- 475
++KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 448 QHIKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFF 502
Query: 476 ---EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 503 GPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 545
>gi|291409713|ref|XP_002721143.1| PREDICTED: poly(rC) binding protein 2-like isoform 2 [Oryctolagus
cuniculus]
Length = 340
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 100/216 (46%), Gaps = 45/216 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPLVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKH 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHS 336
+ ++ ++P K +P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 197
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPLVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
D N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 7 DGGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|212723546|ref|NP_001131366.1| uncharacterized protein LOC100192689 [Zea mays]
gi|194691330|gb|ACF79749.1| unknown [Zea mays]
gi|413935393|gb|AFW69944.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 467
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 37/200 (18%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI--PGSEERVIIIYSSPT 182
P +V+R++ P+ K+GG+IG+ G+ +K L +ET+A++ V D G+ R++++
Sbjct: 95 PGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLV----- 149
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
SA E + + P A +A +K+ I E +D N + T+ A
Sbjct: 150 -----------SAREEVEAELSP---AMNAAIKIFKHINE--------IEDINSDGTLMA 187
Query: 243 --------RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
RLLVP ++GK+G I+ ++ TG+ +R++ D L + +V+I
Sbjct: 188 PAPEISSVRLLVPFAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEI 247
Query: 295 SGKPNVAKRALYEVSTLLHQ 314
+G AL V LL +
Sbjct: 248 NGASLEVLNALKLVLGLLRK 267
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 107/220 (48%), Gaps = 26/220 (11%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP--TDSDERVIRASAFEGLWNPR 457
+++ A K+GG+IG+ G +K+L ET A + V DAP + R++ SA E +
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSAREEVEAEL 159
Query: 458 SQTIDAILQL---QNKTSEFSEKGTI--------TTRLLVPSSKVGCILGQGGHVINEMR 506
S ++A +++ N+ + + GT+ + RLLVP ++ ++G+ G I ++
Sbjct: 160 SPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSIQ 219
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA----HGTYQSFMTSGQSMKV 562
T + +R++ L H E IV+I G+S +++A G + F+ + +
Sbjct: 220 ESTGSTVRIMDEDELLS--HETMGERIVEINGASLEVLNALKLVLGLLRKFLVDHGVLHL 277
Query: 563 QPSSYQNINPQQSSCQTMSSHQSS---YQNMNTQQSPYHR 599
++ NP+ + Q+ + + S Y + + +PY R
Sbjct: 278 ----FERKNPEVAQPQSRGNPKGSRFLYGHDPSFHAPYSR 313
>gi|72013105|ref|XP_781909.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Strongylocentrotus purpuratus]
Length = 447
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 49/225 (21%)
Query: 129 VYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ 188
++R++ S GGVIGK G +K LR + AK+++ D + P +I K
Sbjct: 36 IFRLMIRSINAGGVIGKGGENIKRLRVDYDAKVSIPDC------------NGPERIIKIG 83
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
++ D+A + K+ + P K H S D NS I R++V
Sbjct: 84 TRNVDNAIDCIKDII-PSVGE-----KKH-------------SQDQQNNSFI--RIMVHQ 122
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV---AKRAL 305
+ G ++G+ G I+ LR +TGA+ +V C +TD +VQ++G P+V A R +
Sbjct: 123 SHAGAIIGRAGFKIKELREKTGAHFKVY----TETCPKSTDRVVQLTGSPDVIAKAAREV 178
Query: 306 YEVST-LLHQNPRKDKPP----SSFPQAYGGQNFHSPPAPMADMH 345
YE+ T + P +D P F YGG F P ++H
Sbjct: 179 YEICTETAVKGPVQDYDPFCHDLDFYNQYGGYLFD----PAEEVH 219
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 9/147 (6%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++ + GGVIGKGG N+K+L+ + A + + D + ER+I+ + N
Sbjct: 37 FRLMIRSINAGGVIGKGGENIKRLRVDYDAKVSIPDC--NGPERIIKIGT-RNVDNAIDC 93
Query: 460 TIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGAR 519
D I + K ++ R++V S G I+G+ G I E+R +T A +V
Sbjct: 94 IKDIIPSVGEKKHSQDQQNNSFIRIMVHQSHAGAIIGRAGFKIKELREKTGAHFKV---- 149
Query: 520 VKLQDPHPGSSECIVDIRGSSEHLISA 546
+ P S++ +V + GS + + A
Sbjct: 150 --YTETCPKSTDRVVQLTGSPDVIAKA 174
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 47/100 (47%), Gaps = 5/100 (5%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVI 175
E+ Q ++ RI+ G +IG+AG +K LRE+T A V +T P S +RV+
Sbjct: 103 EKKHSQDQQNNSFIRIMVHQSHAGAIIGRAGFKIKELREKTGAHFKVYTETCPKSTDRVV 162
Query: 176 IIYSSPTKIAKTQNKDDDSAAETK----KESMEPHCAAQD 211
+ SP IAK + + ET + +P C D
Sbjct: 163 QLTGSPDVIAKAAREVYEICTETAVKGPVQDYDPFCHDLD 202
>gi|222622454|gb|EEE56586.1| hypothetical protein OsJ_05944 [Oryza sativa Japonica Group]
Length = 674
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 99/198 (50%), Gaps = 30/198 (15%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVI 175
S+G Q T I P+ ++G +IGK+G +K+L+ ++ AKI V D +PGS+ R +
Sbjct: 111 SYGGYQ--GTSKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPV 168
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN 235
+ +P +I++ + ++ AE S + + K + D F
Sbjct: 169 ELSGTPDQISRAEQLINEVLAEADAAS-----SGNLSSRKYNAPQPGADQF--------- 214
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
++ + NN VG ++GK G+ I+ +++++GA I+V+P LPP T+ V I
Sbjct: 215 -------QMKIANNKVGLVIGKGGETIKSMQAKSGARIQVVPL-HLPPGDPATERTVYID 266
Query: 296 G---KPNVAKRALYEVST 310
G + AK+ + EV++
Sbjct: 267 GTQEQIETAKQLVIEVTS 284
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIRASAFEGLWN 455
S I G++G +IGK G +K LQ ++GA I V DA S R + S +
Sbjct: 119 SKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKIQVTRDLDALPGSQTRPVELSGTPDQIS 178
Query: 456 PRSQTIDAIL---------QLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMR 506
Q I+ +L L ++ + G ++ + ++KVG ++G+GG I M+
Sbjct: 179 RAEQLINEVLAEADAASSGNLSSRKYNAPQPGADQFQMKIANNKVGLVIGKGGETIKSMQ 238
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
++ A I+VV + DP ++E V I G+ E + +A
Sbjct: 239 AKSGARIQVVPLHLPPGDP---ATERTVYIDGTQEQIETA 275
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 12/100 (12%)
Query: 214 LKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANI 273
L H + +GG + + +PN VG ++GK G+ I+ L+ ++GA I
Sbjct: 100 LSSHGSTPQYSSYGGYQG--------TSKTIEIPNGRVGVIIGKSGETIKNLQLQSGAKI 151
Query: 274 RVL-PADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+V D LP + V++SG P+ RA ++ +L
Sbjct: 152 QVTRDLDALP---GSQTRPVELSGTPDQISRAEQLINEVL 188
>gi|222623934|gb|EEE58066.1| hypothetical protein OsJ_08922 [Oryza sativa Japonica Group]
Length = 313
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 74/315 (23%), Positives = 133/315 (42%), Gaps = 58/315 (18%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKI 184
T R L + G +IGK G+ + + ++ A+I ++ + PG+ +R+I++
Sbjct: 11 THLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMV------- 63
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
D ++K + I+E+ L G S++ + RL
Sbjct: 64 ----------------------SGLFDEVIKAMELILEKLLAEGEESNEAEARPKV--RL 99
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
+VPN+ G ++GK G I+ ++ A I++ P D D +V ++G + RA
Sbjct: 100 VVPNSSCGGIIGKGGSTIKSFIEDSHAGIKISPQDN--NFVGLHDRLVTVTGPLDHQMRA 157
Query: 305 LYEVSTLLHQNPRKDKPPS-SFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
+Y + + L ++ PP+ S P Y G F S P P+G + +P
Sbjct: 158 IYLILSKLSEDVH--YPPNLSSPFPYAGLGFPSYPGV-----PVG-----------YMIP 199
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQM---GEVSAEFSMKILCSAGKIGGVIGKGGFNV 420
P+ P+ G N+ P M A+ S+ I + IG V+G+ G N+
Sbjct: 200 QVPYNNAVNYGPNGYGGRYQNNKPSTPMRSPANNDAQDSLTIGIADEHIGAVVGRAGRNI 259
Query: 421 KQLQQETGASIHVED 435
++ Q +GA I + D
Sbjct: 260 TEIIQASGARIKISD 274
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 60/120 (50%), Gaps = 6/120 (5%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV----EDAPTDSDERVIRASAFEGLWN 455
++ L S G +IGKGG + + Q ++GA I + E P +D ++ + F+ +
Sbjct: 13 LRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVIK 72
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
++ +L +++E + + RL+VP+S G I+G+GG I + A I++
Sbjct: 73 AMELILEKLLAEGEESNEAEARPKV--RLVVPNSSCGGIIGKGGSTIKSFIEDSHAGIKI 130
Score = 43.1 bits (100), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 10/67 (14%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPH---PGSSECIVDIRGS 539
R LV ++ GCI+G+GG INE + ++ GAR++L H PG+++ I+ + G
Sbjct: 14 RFLVSNTAAGCIIGKGGSTINEFQSQS-------GARIQLSRSHEFFPGTNDRIIMVSGL 66
Query: 540 SEHLISA 546
+ +I A
Sbjct: 67 FDEVIKA 73
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
M+ DD E T R LV N GC++GK G I +S++GA I++ + P
Sbjct: 1 MSKRDDKEKPT-HLRFLVSNTAAGCIIGKGGSTINEFQSQSGARIQLSRSHEFFPGT--N 57
Query: 289 DEMVQISG 296
D ++ +SG
Sbjct: 58 DRIIMVSG 65
>gi|296213265|ref|XP_002753197.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Callithrix
jacchus]
Length = 342
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/329 (25%), Positives = 142/329 (43%), Gaps = 75/329 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN------- 66
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
A A + D++ EED+ M + +T L+VP +
Sbjct: 67 -----------------AIFKAFAMIIDKL-EEDIRSSMTNSTAASRPPVTLSLVVPASQ 108
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + ++
Sbjct: 109 CGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQIFV 164
Query: 311 LLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP-MADMHPLG--NSSWPAR 355
++ ++P K +P PSS P QAY Q ++ P P + +H L S +P
Sbjct: 165 VMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAIQQSHFPMT 224
Query: 356 NSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAE-FSMKILCSAGKIGGVIG 414
HG +T + G + SA+ S ++ IG +IG
Sbjct: 225 ----HG--NTGFSAGL---------------------DASAQTTSHELTIPNDLIGCIIG 257
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ G + +++Q +GA I + + S +R
Sbjct: 258 RQGAKINEIRQMSGAQIKIANPVEGSTDR 286
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 66/249 (26%), Positives = 106/249 (42%), Gaps = 37/249 (14%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K SS S S+P T+ ++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEDIRSSMTNSTAASRPPVTL-SLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETK----------KESM 203
E T A++ VA D +P S ER I I P I + + E+ K S
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQIFVVMLESPPKGVTIPYRPKPSS 184
Query: 204 EP--------------HCAAQDALLKVHDRIIEEDLF------GGMASDDDNENSTITAR 243
P + Q L K+H I++ F G ++ D T +
Sbjct: 185 SPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAIQQSHFPMTHGNTGFSAGLDASAQTTSHE 244
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
L +PN+++GC++G++G I +R +GA I++ P +TD V I+G
Sbjct: 245 LTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI-----ANPVEGSTDRQVTITGSAASISL 299
Query: 304 ALYEVSTLL 312
A Y ++ L
Sbjct: 300 AQYLINVRL 308
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 113/241 (46%), Gaps = 25/241 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAI---LQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
++ + ID + ++ S + + +T L+VP+S+ G ++G+GG I E+R
Sbjct: 66 NAIFKAFAMIIDKLEEDIRSSMTNSTAASRPPVTLSLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSY 567
T A ++V G D P S+E + I G + +I Q F+ M P
Sbjct: 126 STGAQVQVAG------DMLPNSTERAITIAGIPQSIIEC--VKQIFVV----MLESPPKG 173
Query: 568 QNI--NPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSYPMHTHQGA 625
I P+ SS + + +Y T Q Y + + QQS +PM TH
Sbjct: 174 VTIPYRPKPSSSPVIFAGGQAY----TIQGQYAIPQPDLTKLHQLAIQQSHFPM-THGNT 228
Query: 626 G 626
G
Sbjct: 229 G 229
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 15/94 (15%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 240 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 292
Query: 539 SSEHLISAH---GTYQSFMTSGQSMKVQPSSYQN 569
S+ + A S +T G SSY N
Sbjct: 293 SAASISLAQYLINVRLSLVTGGMG-----SSYNN 321
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 44/81 (54%), Gaps = 7/81 (8%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + ++ ++G
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEGN----CP---ERIITLAG 63
Query: 297 KPNVAKRALYEVSTLLHQNPR 317
N +A + L ++ R
Sbjct: 64 PTNAIFKAFAMIIDKLEEDIR 84
>gi|291327528|ref|NP_001167544.1| poly(rC)-binding protein 2 isoform 4 [Mus musculus]
gi|348581081|ref|XP_003476306.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cavia porcellus]
gi|74149644|dbj|BAE36444.1| unnamed protein product [Mus musculus]
gi|194378584|dbj|BAG63457.1| unnamed protein product [Homo sapiens]
gi|417398924|gb|JAA46495.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 322
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 140/337 (41%), Gaps = 85/337 (25%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
+A+ K II EED+ M + +T RL+V
Sbjct: 66 ---------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVK 160
Query: 307 EVSTLLHQNPRKDKP----------PSSFP------QAYGGQNFHSPPAP-MADMHPLG- 348
++ ++ + + P PSS P QAY Q ++ P P + +H L
Sbjct: 161 QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAM 220
Query: 349 -NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAE-FSMKILCSA 406
S +P HG +T + G + SA+ S ++
Sbjct: 221 QQSHFPMT----HG--NTGFSAGL---------------------DASAQTTSHELTIPN 253
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
IG +IG+ G + +++Q +GA I + + S +R
Sbjct: 254 DLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 290
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 107/253 (42%), Gaps = 41/253 (16%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKES----------- 202
E T A++ VA D +P S ER I I P I + + ET +S
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 203 -----------------MEPHCAAQDALLKVHDRIIEEDLF------GGMASDDDNENST 239
+ Q L K+H +++ F G ++ D T
Sbjct: 185 KPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQT 244
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ L +PN+++GC++G++G I +R +GA I++ P +TD V I+G
Sbjct: 245 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI-----ANPVEGSTDRQVTITGSAA 299
Query: 300 VAKRALYEVSTLL 312
A Y ++ L
Sbjct: 300 SISLAQYLINVRL 312
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/243 (25%), Positives = 117/243 (48%), Gaps = 25/243 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPS 565
R T A ++V G D P S+E + I G + +I Q + +++ P
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSIIEC--VKQICVVMLETLSQSPP 175
Query: 566 SYQNI--NPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSYPMHTHQ 623
I P+ SS + + +Y T Q Y + + QQS +PM TH
Sbjct: 176 KGVTIPYRPKPSSSPVIFAGGQAY----TIQGQYAIPQPDLTKLHQLAMQQSHFPM-THG 230
Query: 624 GAG 626
G
Sbjct: 231 NTG 233
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 244 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 296
Query: 539 SSEHL 543
S+ +
Sbjct: 297 SAASI 301
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|432881655|ref|XP_004073886.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-B-like isoform 2 [Oryzias latipes]
Length = 447
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 71/297 (23%), Positives = 118/297 (39%), Gaps = 48/297 (16%)
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
A D I ++L NN VG L+GK G ++++ +TG I + P L N +
Sbjct: 128 AKDQARLTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTGTKITISPLQDL--TLYNPE 185
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G RA EV + + D N S P +++ LG
Sbjct: 186 RTITVKGSIEACSRAEEEVMKKVREAYESD---------MAAMNLQSNLIPGLNLNALGL 236
Query: 350 --SSWPARNSSLHGMPSTPWMGG---YGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILC 404
S P S+ P + GG +G QP ++ +
Sbjct: 237 FPSGTPGMGPSMSNFPPSGAHGGCSSFGGQPESE--------------------TVHLFI 276
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP-TDSDERVIRASAFEGLWNPRSQTIDA 463
A +G +IGK G ++KQL GASI + A D+ +R++ + P A
Sbjct: 277 PALAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGMDAKQRMVI------IVGPPEAQFKA 330
Query: 464 ILQLQNKTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
++ K E + E+ + + VPS G ++G+GG +NE++ T A++ V
Sbjct: 331 QCRIFGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEVVV 387
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 85/194 (43%), Gaps = 39/194 (20%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP-GSEERVIII 177
SFG ++TV+ + P+ +G +IGK G +K L A I +A +++R++II
Sbjct: 262 SFGGQPESETVH-LFIPALAVGAIIGKQGQHIKQLSHFAGASIKIAPAEGMDAKQRMVII 320
Query: 178 YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN 237
P K Q ++ ++ EE+ FG E
Sbjct: 321 VGPPEAQFKAQ-------------------------CRIFGKLKEENFFG------PKEE 349
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG- 296
+ A + VP+ G ++GK G + L++ T A + V+P D+ P N +V+ISG
Sbjct: 350 VKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTCAEV-VVPRDQTPD--ENDQVIVKISGH 406
Query: 297 --KPNVAKRALYEV 308
+A+R + E+
Sbjct: 407 FFACQLAQRKIQEI 420
>gi|426237799|ref|XP_004012845.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 1
[Ovis aries]
Length = 576
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 86/403 (21%), Positives = 159/403 (39%), Gaps = 77/403 (19%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S L + P N +
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMS----------------------LQSHLIPGLNLAA 372
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINS--CPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
G+ S G+ +S P +M +++ A +G +IGK G
Sbjct: 373 VGLFPASSSAVPPPPSSVTGAAPYSSFMXPEQEM--------VQVFIPAQAVGAIIGKKG 424
Query: 418 FNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-- 475
++KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 425 QHIKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFF 479
Query: 476 ---EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 480 GPKEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 522
>gi|326921878|ref|XP_003207181.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein
3-like, partial [Meleagris gallopavo]
Length = 503
Score = 70.1 bits (170), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 85/396 (21%), Positives = 160/396 (40%), Gaps = 71/396 (17%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKI 184
+D R+L P++ +G +IGK G ++++ ++TQ+KI + G+ E+ I I+S+P
Sbjct: 116 SDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTP--- 172
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
E C K+ I++++ + D I ++
Sbjct: 173 ----------------EGCSTAC-------KIIMEIMQKE------AQDTKFTEEIPLKI 203
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L NN VG L+GK G ++++ +T I + P L N + + + G +A
Sbjct: 204 LAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIETCAKA 261
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPS 364
E+ + + S+ N + P +++ LG +P +S +
Sbjct: 262 EEEIMKKIRE---------SYENDIAAMNLQAHLIPGLNLNALG--LFPPSSSGIPPPAV 310
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQ 424
+ G S ++ + A +G +IGK G ++KQL
Sbjct: 311 SVASAAAAASYPPFGPES---------------ETVHLFIPALAVGAIIGKQGQHIKQLS 355
Query: 425 QETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EKGT 479
+ GASI + AP + + +R G P A ++ K E + E+
Sbjct: 356 RFAGASIKI--APAEGPDAKLRMVIITG---PPEAQFKAQGRIYGKLKEENFFGPKEEVK 410
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ + VPS G ++G+GG +NE++ T A++ V
Sbjct: 411 LEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVV 446
>gi|397495989|ref|XP_003818826.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Pan paniscus]
gi|397495991|ref|XP_003818827.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pan paniscus]
Length = 403
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 79/321 (24%), Positives = 135/321 (42%), Gaps = 60/321 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL-----HGMP 363
++ ++P K P G S + G + PA + L H +P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYG-AVTPAEVTKLQQLSSHAVP 225
Query: 364 -STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+TP M + PG + S + L IG VIG+ G + +
Sbjct: 226 FATPSM--------------VPGLDPG-----TQTSSQEFLVPNDLIGCVIGRQGSKISE 266
Query: 423 LQQETGASIHVEDAPTDSDER 443
++Q +GA I + + + ER
Sbjct: 267 IRQMSGAHIKIGNQAEGAGER 287
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 95 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGG------- 228
P I + E+ + P + LL + + +G
Sbjct: 155 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVT 214
Query: 229 ----------------MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
M D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 215 KLQQLSSHAVPFATPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 274
Query: 273 IRV 275
I++
Sbjct: 275 IKI 277
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|50311087|ref|XP_455567.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644703|emb|CAG98275.1| KLLA0F10703p [Kluyveromyces lactis]
Length = 417
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 138/344 (40%), Gaps = 67/344 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+LC ++ V+G G V ++ ET +I V+D I G ERVI + ++A+
Sbjct: 70 RMLCLMKQASKVVGGKGERVNRIKSETNTRINVSDNINGVMERVIFVRGKCEEVAR---- 125
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST-ITARLLVPNN 249
A K+ I E + DD NE S + LL+P++
Sbjct: 126 ---------------------AFGKIVRAINNE------SDDDSNERSLPLVVNLLIPHH 158
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
+GC++G++G + + + A + P +LP M+ D ++ ++G + A Y +
Sbjct: 159 FMGCIIGRQGSRLHEIEDLSAARLMASP-QQLP---MSNDRILSLTGVADAIHIATYYIG 214
Query: 310 TLLHQNPRKDKPPSS-----------------FPQAYGGQNFHSPP--APMADMHPLGNS 350
+ +N K K S Y G +P PM H +
Sbjct: 215 QTILENESKLKNKKSVFYHPGPMHSVLVNNYQMYMIYSGGAPTNPQDITPMVAPHQEHHQ 274
Query: 351 SWPARNSSLHGMPSTPWMGGY--GDQPSRM-GSGSINSCP------PGQMGEVSAEFSM- 400
P +++ + P + Y G Q S + ++SC Q +S +
Sbjct: 275 YHPMDKKTMNRR-TKPPVSKYPIGPQQSLQPYTDMVDSCKHVKIISQLQQSPISPHLVLP 333
Query: 401 -KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
++ +G VIGKGG N++Q++Q TG I + D DER
Sbjct: 334 QEVFIDNKFVGNVIGKGGKNIQQIKQSTGCMIKINDPVEGLDER 377
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 93/188 (49%), Gaps = 13/188 (6%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G+V ++++LC + V+G G V +++ ET I+V D ERVI
Sbjct: 61 GQVPNYINLRMLCLMKQASKVVGGKGERVNRIKSETNTRINVSDNINGVMERVI---FVR 117
Query: 452 GLWNPRSQTIDAILQ-LQNKTSEFSEKGT--ITTRLLVPSSKVGCILGQGGHVINEMRRR 508
G ++ I++ + N++ + S + + + LL+P +GCI+G+ G ++E+
Sbjct: 118 GKCEEVARAFGKIVRAINNESDDDSNERSLPLVVNLLIPHHFMGCIIGRQGSRLHEIEDL 177
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL-ISAHGTYQSFMTSGQSMKVQPSSY 567
+ A R++ + +L P S++ I+ + G ++ + I+ + Q+ + + +K + S +
Sbjct: 178 SAA--RLMASPQQL----PMSNDRILSLTGVADAIHIATYYIGQTILENESKLKNKKSVF 231
Query: 568 QNINPQQS 575
+ P S
Sbjct: 232 YHPGPMHS 239
>gi|357465709|ref|XP_003603139.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492187|gb|AES73390.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 97/200 (48%), Gaps = 39/200 (19%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVI 175
S+G+S+ +I P+ ++G +IGK G +K L+ ++ AKI V D P S+ R++
Sbjct: 83 SYGSSK------KIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMV 136
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE---DLFGGMASD 232
+ +P ++ + ++ AE A A + R++ + D F
Sbjct: 137 ELMGTPDAVSSAEKLINEVLAE----------AEAGASVGGTRRMVAQSGGDEF------ 180
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
+ +PNN VG ++GK G+ I+ +++ TGA I+V+P PP +T+ +
Sbjct: 181 ----------VMQIPNNKVGLIIGKGGETIKGMQASTGARIQVIPL-HPPPGDTSTERTL 229
Query: 293 QISGKPNVAKRALYEVSTLL 312
+I G P+ + A V+ +L
Sbjct: 230 KIDGTPDQIESAKQLVNQIL 249
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 67/237 (28%), Positives = 101/237 (42%), Gaps = 26/237 (10%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIR-------AS 448
S KI G++G +IGKGG +K LQ ++GA I V DA +S R++ S
Sbjct: 87 SKKIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGTPDAVS 146
Query: 449 AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+ E L N +A + ++ G + +P++KVG I+G+GG I M+
Sbjct: 147 SAEKLINEVLAEAEAGASVGGTRRMVAQSGGDEFVMQIPNNKVGLIIGKGGETIKGMQAS 206
Query: 509 TQADIRVVGARVKLQDPHPG--SSECIVDIRGSSEHLISAHGTYQSFMT-------SGQS 559
T A I+V+ P PG S+E + I G+ + + SA +T SG S
Sbjct: 207 TGARIQVIPLH-----PPPGDTSTERTLKIDGTPDQIESAKQLVNQILTGENRLRNSGNS 261
Query: 560 MKVQPSSYQNINPQQSSCQTMSSHQS--SYQNMNTQQSPYHRVNAQQSPYQNINPQQ 614
YQ+ P + Q+ Y + P + N Q PY PQQ
Sbjct: 262 GGYTQQGYQSRPPSSWAPPAAPVQQAGYGYGQPGSYSGPSPQYNTPQPPYTGYPPQQ 318
>gi|354484186|ref|XP_003504271.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 2-like
isoform 2 [Cricetulus griseus]
Length = 487
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 92/420 (21%), Positives = 171/420 (40%), Gaps = 97/420 (23%)
Query: 106 IKKGNWSNSSREQ----SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKI 161
+++G+ +SSREQ S ++ D RIL P++ +G +IGK G +K++ ++TQ+++
Sbjct: 101 VQRGD--HSSREQGHSGSSSQTRQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRV 158
Query: 162 TV-ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI 220
+ G+ E+ + I+++P E A +L++ +
Sbjct: 159 DIHRKENSGAAEKPVTIHATP----------------------EGTSEACRMILEIMQK- 195
Query: 221 IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
++D + ++L N +VG L+GK G ++++ ETG I +
Sbjct: 196 ---------EAEDTKLAEEVPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQD 246
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAP 340
L N + + + G + A E+ L + +F N HS P
Sbjct: 247 L--SIYNPERTITVKGTIDACANAEMEIMKKLRE---------AFENDMLAVNSHSGYFP 295
Query: 341 MADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSM 400
+M+P + + S Y +Q + +N P Q
Sbjct: 296 --NMYPHHHFGPFPHHHS------------YPEQET------VNLFIPTQA--------- 326
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRS 458
+G +IGK G ++KQL + GASI + + P S+ VI E + +
Sbjct: 327 --------VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQG 378
Query: 459 QTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ + K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 379 RIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 433
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 38/190 (20%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSSP 181
S P + P++ +G +IGK G +K L A I +A P ER++II P
Sbjct: 311 SYPEQETVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP 370
Query: 182 TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
K Q + + ++ EE+ F + E +
Sbjct: 371 EAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKLE 399
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---KP 298
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 400 AHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENAEVIVRIIGHFFAS 456
Query: 299 NVAKRALYEV 308
A+R + E+
Sbjct: 457 QTAQRKIREI 466
>gi|357437527|ref|XP_003589039.1| Far upstream element-binding protein [Medicago truncatula]
gi|355478087|gb|AES59290.1| Far upstream element-binding protein [Medicago truncatula]
Length = 605
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 110/254 (43%), Gaps = 40/254 (15%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIRASAFEGLWN 455
S KI G++G +IGKGG +K LQ ++GA I V DA +S R++ +
Sbjct: 113 SKKIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSDAIA 172
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITTRLL-----------VPSSKVGCILGQGGHVINE 504
+ I +L +E G +T R+ +P++KVG I+G+GG I
Sbjct: 173 TAEKLIKEVL----AEAESGGNGLVTRRMTGQGGADEFSMKIPNNKVGLIIGKGGETIKS 228
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQP 564
M+ T A I+V+ + D S+E + I G+SE + SA S ++ ++
Sbjct: 229 MQATTGARIQVIPLHLPPGD---TSTERTLKIEGTSEQIESAKQLVDSILSGENRLR--- 282
Query: 565 SSYQNINPQQSSCQTMSSHQ----SSYQNMNTQQSP---YHRVNAQQSPYQNIN-PQQ-- 614
NP S + +Q SS+ Q P Y + A P N PQQ
Sbjct: 283 ------NPSMSGGYSQQGYQARPPSSWAPPAASQQPGYGYAQPGAYPGPTPQYNVPQQAY 336
Query: 615 SSYPMHTHQGAGTN 628
+ YP H+ G TN
Sbjct: 337 AGYPPHSAGGYSTN 350
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 88/185 (47%), Gaps = 27/185 (14%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
+I P+ ++G +IGK G +K L+ ++ AKI V D P S R++ + + IA
Sbjct: 115 KIEIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPNRLVELTGTSDAIATA 174
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
+ + AE + + ++ + G +D+ + + +P
Sbjct: 175 EKLIKEVLAEAESGG---------------NGLVTRRMTGQGGADEFS--------MKIP 211
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
NN VG ++GK G+ I+ +++ TGA I+V+P LPP +T+ ++I G + A
Sbjct: 212 NNKVGLIIGKGGETIKSMQATTGARIQVIPL-HLPPGDTSTERTLKIEGTSEQIESAKQL 270
Query: 308 VSTLL 312
V ++L
Sbjct: 271 VDSIL 275
>gi|255561653|ref|XP_002521836.1| RNA-binding protein Nova-1, putative [Ricinus communis]
gi|223538874|gb|EEF40472.1| RNA-binding protein Nova-1, putative [Ricinus communis]
Length = 544
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 94/188 (50%), Gaps = 27/188 (14%)
Query: 112 SNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIP 168
S +S++ + SQ T RI PS K+G VIGK G +K+++ ++ AKI + D P
Sbjct: 72 SYASQQSQYHGSQ--GTSKRITIPSGKVGVVIGKGGETIKNIQLQSGAKIQITKDQDADP 129
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
S R + + + +I++ + +D AET + +A A+ ++ + + F
Sbjct: 130 HSLTRDVELMGTSEQISRAEELINDVIAET-----DAGGSASSAVHGLNTKQPGAEQF-- 182
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+ VPN+ VG L+GK G+ I+ ++S +GA ++++P LPP T
Sbjct: 183 --------------SIRVPNDKVGLLIGKGGETIKYMQSRSGARMQIIPL-HLPPGDPTT 227
Query: 289 DEMVQISG 296
+ V I+G
Sbjct: 228 ERTVYING 235
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 78/160 (48%), Gaps = 15/160 (9%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERVI-------RAS 448
S +I +GK+G VIGKGG +K +Q ++GA I + +DA S R + + S
Sbjct: 87 SKRITIPSGKVGVVIGKGGETIKNIQLQSGAKIQITKDQDADPHSLTRDVELMGTSEQIS 146
Query: 449 AFEGLWNPRSQTIDAILQLQNKTSEFSEK--GTITTRLLVPSSKVGCILGQGGHVINEMR 506
E L N DA + + K G + VP+ KVG ++G+GG I M+
Sbjct: 147 RAEELINDVIAETDAGGSASSAVHGLNTKQPGAEQFSIRVPNDKVGLLIGKGGETIKYMQ 206
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
R+ A ++++ + DP ++E V I G +E + +A
Sbjct: 207 SRSGARMQIIPLHLPPGDP---TTERTVYINGLTEQIEAA 243
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 4/78 (5%)
Query: 470 KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS 529
+ S++ + R+ +PS KVG ++G+GG I ++ ++ A I++ K QD P S
Sbjct: 76 QQSQYHGSQGTSKRITIPSGKVGVVIGKGGETIKNIQLQSGAKIQI----TKDQDADPHS 131
Query: 530 SECIVDIRGSSEHLISAH 547
V++ G+SE + A
Sbjct: 132 LTRDVELMGTSEQISRAE 149
>gi|260814700|ref|XP_002602052.1| hypothetical protein BRAFLDRAFT_127356 [Branchiostoma floridae]
gi|229287357|gb|EEN58064.1| hypothetical protein BRAFLDRAFT_127356 [Branchiostoma floridae]
Length = 499
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 47/152 (30%), Positives = 78/152 (51%), Gaps = 14/152 (9%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRS 458
++IL + G +IGK G N+K+L+ E A++ V D ER++ SA L +
Sbjct: 44 DLRILLQSKNAGAIIGKQGLNIKRLRSEYKATVTVPDCT--GPERILTISA--DLNTACA 99
Query: 459 QTIDAILQLQNKTSEFSEKGTIT----TRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+D I L++ + E + R+LV S+ GCI+G+ G I E+R +T+A+I+
Sbjct: 100 CLLDIIPVLEDYQKHYQEHKDLNFNCELRMLVHQSQAGCIIGRAGFKIKELREQTEANIK 159
Query: 515 VVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
V + PGS+E +V + G E + A
Sbjct: 160 V------YSECMPGSTERVVALTGKPEKCVGA 185
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
RIL S+ G +IGK G +K LR E +A +TV D ER++ I +
Sbjct: 46 RILLQSKNAGAIIGKQGLNIKRLRSEYKATVTVPDCT--GPERILTISAD---------- 93
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ CA ++ V ED + + + N R+LV +
Sbjct: 94 ------------LNTACACLLDIIPVL-----ED-YQKHYQEHKDLNFNCELRMLVHQSQ 135
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
GC++G+ G I+ LR +T ANI+V ++ +P +T+ +V ++GKP A+ ++
Sbjct: 136 AGCIIGRAGFKIKELREQTEANIKVY-SECMPG---STERVVALTGKPEKCVGAIKKIIE 191
Query: 311 LLHQNPRK 318
LL + P K
Sbjct: 192 LLQKAPIK 199
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 43/79 (54%), Gaps = 8/79 (10%)
Query: 474 FSEKGTIT-TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSEC 532
F G IT T++ +P G I+G+GG I +R R++A I K+ +P PGS++
Sbjct: 401 FGTGGNITSTQVTIPKELAGSIIGRGGSRIRTIRERSEAQI-------KIDEPLPGSTDR 453
Query: 533 IVDIRGSSEHLISAHGTYQ 551
I+ I G ++ + +A Q
Sbjct: 454 IITISGDNDQIRNAQFLLQ 472
Score = 42.7 bits (99), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T ++ P G +IG+ G+ ++++RE ++A+I + + +PGS +R+I I +I
Sbjct: 408 TSTQVTIPKELAGSIIGRGGSRIRTIRERSEAQIKIDEPLPGSTDRIITISGDNDQIRNA 467
Query: 188 Q 188
Q
Sbjct: 468 Q 468
>gi|427784321|gb|JAA57612.1| Putative polyc-binding hnrnp-k protein hrb57a/hnrnp [Rhipicephalus
pulchellus]
Length = 334
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 105/226 (46%), Gaps = 42/226 (18%)
Query: 114 SSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEER 173
S R ++ G + D R L SR G +IGK G+ + SLR+E +A I+V D PG E R
Sbjct: 26 SKRPRNTGGGRAVDV--RFLLQSRNAGAIIGKGGSNINSLRKEFKASISVPDC-PGPE-R 81
Query: 174 VIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD 233
++ I + D D+ E + + K+ DR ++ G
Sbjct: 82 ILSIVA-----------DLDTLGEI----------LLNIIPKLDDRSMQFAQHTGQ---- 116
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
N S RLL+ + GC++G+ G I+ LR TGANI+V + C +T+ +V+
Sbjct: 117 -NGGSESEMRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVHGS----CCPGSTERIVK 171
Query: 294 ISGKPNVAKRALYEVSTLLHQNPRK--DKP------PSSFPQAYGG 331
++G P+V + ++ ++ P K +KP F Q YGG
Sbjct: 172 VTGSPSVVVDCIKQICDIVGVAPIKGLNKPYDPHNFDPEFAQEYGG 217
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 75/146 (51%), Gaps = 16/146 (10%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
++ L + G +IGKGG N+ L++E ASI V D P ER++ S L
Sbjct: 40 VRFLLQSRNAGAIIGKGGSNINSLRKEFKASISVPDCP--GPERIL--SIVADLDTLGEI 95
Query: 460 TIDAILQLQNKTSEFSEK------GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
++ I +L +++ +F++ RLL+ S GCI+G+ G I E+R T A+I
Sbjct: 96 LLNIIPKLDDRSMQFAQHTGQNGGSESEMRLLMHQSHAGCIIGRAGCRIKELRESTGANI 155
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGS 539
+V G+ PGS+E IV + GS
Sbjct: 156 KVHGSCC------PGSTERIVKVTGS 175
>gi|393905262|gb|EJD73914.1| hypothetical protein LOAG_18700 [Loa loa]
Length = 228
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQ- 466
++G +IGK G ++K ++ ++GA I++ D ER++ + G N I A LQ
Sbjct: 12 EVGSIIGKRGDHIKLIRDQSGAKINISDG--SCPERIVTITGSTGTINKAFIMICAKLQQ 69
Query: 467 -LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDP 525
LQ + K IT RL+VP+++ GCI+G+GG I E+R T A I+V +
Sbjct: 70 DLQALPNSI-PKPPITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQVASEML----- 123
Query: 526 HPGSSECIVDIRGSSEHLI 544
P S+E V I GS++ ++
Sbjct: 124 -PSSTERAVTISGSADSIV 141
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/182 (26%), Positives = 86/182 (47%), Gaps = 35/182 (19%)
Query: 137 RKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAA 196
+++G +IGK G+ +K +R+++ AKI ++D ER++ I S I K
Sbjct: 11 KEVGSIIGKRGDHIKLIRDQSGAKINISDG--SCPERIVTITGSTGTINK---------- 58
Query: 197 ETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLG 256
A + + ++ ++DL A + IT RL+VP GC++G
Sbjct: 59 ---------------AFIMICAKL-QQDL---QALPNSIPKPPITMRLIVPATQCGCIIG 99
Query: 257 KRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNP 316
K G I+ +R TGA+I+V ++ LP +T+ V ISG + + + +L + P
Sbjct: 100 KGGSKIKEIREATGASIQV-ASEMLPS---STERAVTISGSADSIVDCMRNICQILLEAP 155
Query: 317 RK 318
K
Sbjct: 156 AK 157
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 118 QSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVI 175
Q+ NS P + R++ P+ + G +IGK G+ +K +RE T A I VA + +P S ER +
Sbjct: 72 QALPNSIPKPPITMRLIVPATQCGCIIGKGGSKIKEIREATGASIQVASEMLPSSTERAV 131
Query: 176 IIYSSPTKIA 185
I S I
Sbjct: 132 TISGSADSIV 141
>gi|291402366|ref|XP_002717547.1| PREDICTED: poly(rC) binding protein 2-like [Oryctolagus cuniculus]
Length = 334
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/338 (24%), Positives = 142/338 (42%), Gaps = 77/338 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVK-MREESGARINISE---GNCPERIITLAGPT-------- 64
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 65 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 104
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 105 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 160
Query: 308 VSTLLHQNPRKDKP----------PSSFP------QAYGGQNFHSPPAP-MADMHPLG-- 348
+ ++ + + P PSS P QAY Q ++ P P + +H L
Sbjct: 161 ICVVMLETLSQSPPKGVTIPYWPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQ 220
Query: 349 NSSWPAR--NSSLHGMP-STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCS 405
S +P N+ G+ S+P + GY + + S ++
Sbjct: 221 QSHFPMTHGNTGFSGIESSSPEVKGYW----------------AGLDASAQTTSHELTIP 264
Query: 406 AGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
IG +IG+ G + +++Q +GA I + + S +R
Sbjct: 265 NDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 302
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 87/159 (54%), Gaps = 17/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK +++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVK-MREESGARINISEG--NCPERIITLAGPT 64
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 65 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 122
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 123 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 155
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 256 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 308
Query: 539 SSEHL 543
S+ +
Sbjct: 309 SAASI 313
>gi|380024759|ref|XP_003696159.1| PREDICTED: poly(rC)-binding protein 3-like [Apis florea]
Length = 560
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 94/199 (47%), Gaps = 33/199 (16%)
Query: 122 NSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYS 179
N P+ T+ R++ +++G +IGK G IVK REE+ AKI ++D GS ER++ +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTG 67
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
I K A + E C+ + HD +
Sbjct: 68 PTNSIFK--------AFTLICKKFEEWCS------QFHD----------IQGSGGVPRPP 103
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
IT RL+VP + G L+GK G I+ +R TGA+I+V +D LP +T+ V ISG
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA-SDMLP---NSTERAVTISGTSE 159
Query: 300 VAKRALYEVSTLLHQNPRK 318
+ +Y + ++ ++P K
Sbjct: 160 AITQCIYHICCVMLESPPK 178
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 78/161 (48%), Gaps = 26/161 (16%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G VK+ ++E+GA I++ D ER++ +
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG----- 67
Query: 455 NPRSQTIDAILQLQNKTSEFSE------------KGTITTRLLVPSSKVGCILGQGGHVI 502
P + A + K E+ + IT RL+VP+S+ G ++G+GG I
Sbjct: 68 -PTNSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 503 NEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
E+R T A I+V D P S+E V I G+SE +
Sbjct: 127 KEIREVTGASIQVA------SDMLPNSTERAVTISGTSEAI 161
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + VPN ++GC++GK G I +R +GA IR+ + A TD + I+G P+
Sbjct: 367 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 424
Query: 301 AKRALYEVS 309
A Y +S
Sbjct: 425 VSLAQYLIS 433
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSRE-QSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSL 153
N+ FK ++ K W + + Q G R++ P+ + G +IGK G+ +K +
Sbjct: 70 NSIFKAFTLICKKFEEWCSQFHDIQGSGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEI 129
Query: 154 REETQAKITVA-DTIPGSEERVIIIYSSPTKIAK 186
RE T A I VA D +P S ER + I + I +
Sbjct: 130 REVTGASIQVASDMLPNSTERAVTISGTSEAITQ 163
>gi|351712813|gb|EHB15732.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 144/349 (41%), Gaps = 72/349 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 64
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 65 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 104
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 105 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 160
Query: 308 VSTLLHQN------------PRKDKPPSSFPQAYGGQNFHSPPA--PMADMHPLGNSSWP 353
+ ++ + P + P SS GGQ+ S A P A H L P
Sbjct: 161 ICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT-HDL--EGPP 217
Query: 354 ARNSSLHGMPS-TPWMGGYGDQPSR-----------MGSGSINSCPPGQMG-----EVSA 396
S+ G + +P +Q +R G I+S P G + S
Sbjct: 218 LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDAST 277
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+ + ++ IG +IG+ G N+ +++Q +GA I + + S R I
Sbjct: 278 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQI 326
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 9 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 66
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 67 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 126
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 127 GAQVQVAG------DMLPNSTERAITIAG 149
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 10 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 48
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS + I GS+
Sbjct: 280 THELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQITITGSA 332
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 333 ASISLAQYLINARLSSEKGM 352
>gi|307108077|gb|EFN56318.1| hypothetical protein CHLNCDRAFT_57590 [Chlorella variabilis]
Length = 688
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 123/291 (42%), Gaps = 80/291 (27%)
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
++ ARLLV +++VG L+G+ G I+ + +GA +R+LP LP CA DE+V++ G
Sbjct: 196 SVEARLLVDSSVVGFLVGRGGATIKDTMARSGAGVRILPKAELPACACLGDEVVRVVGSC 255
Query: 299 NVAKRALYEVSTLLHQNPRKD----------KPPSSFPQAYGGQNFHSPPAPMADMHP-L 347
A AL +++ + + + P + P GQ H P +A +HP L
Sbjct: 256 EAACAALRLLASQIKAHVLRHGPPPPSPSYPGAPGALPPLMLGQAGHHHP-DVAFLHPSL 314
Query: 348 GNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAG 407
+++ +S G+P P G + E + ++L
Sbjct: 315 AAAAFYPPPASPAGLPPPPAFSG-----------------------AAVEVTFRLLAPTN 351
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
+ G +IGKGG +V++++ ETGA I V D S+ER
Sbjct: 352 RTGNIIGKGGEHVRRVRTETGARIKVFDPAPGSEER------------------------ 387
Query: 468 QNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGA 518
+ VG +LG+ G ++++R+ T A I+V+ A
Sbjct: 388 ---------------------ASVGMVLGKRGATVSQLRQETGAAIKVLNA 417
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 16/110 (14%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
+ +R+L P+ + G +IGK G V+ +R ET A+I V D PGSEER +
Sbjct: 341 EVTFRLLAPTNRTGNIIGKGGEHVRRVRTETGARIKVFDPAPGSEER--------ASVGM 392
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE 236
K + ++ ++E+ A +KV + + +GG DD+E
Sbjct: 393 VLGKRGATVSQLRQET--------GAAIKVLNADLVPPAYGGGLGSDDSE 434
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIY 178
R+LCP + +IGK G VK +R E+ A ++VAD + G +ERV+ I
Sbjct: 33 LRLLCPHALVPALIGKKGENVKRIRRESGATLSVADPVLGCDERVVHIM 81
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/33 (60%), Positives = 25/33 (75%)
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPP 283
VG +LGKRG + +LR ETGA I+VL AD +PP
Sbjct: 390 VGMVLGKRGATVSQLRQETGAAIKVLNADLVPP 422
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%), Gaps = 7/52 (13%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSE 531
+T RLL P+++ G I+G+GG + +R T GAR+K+ DP PGS E
Sbjct: 342 VTFRLLAPTNRTGNIIGKGGEHVRRVRTET-------GARIKVFDPAPGSEE 386
Score = 42.4 bits (98), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+++LC + +IGK G NVK++++E+GA++ V D DERV+
Sbjct: 31 LRLRLLCPHALVPALIGKKGENVKRIRRESGATLSVADPVLGCDERVV 78
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Query: 231 SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE 290
SD + E + RLL P+ +V L+GK+G+ ++R+R E+GA + V AD + C +
Sbjct: 22 SDTEPEVPALRLRLLCPHALVPALIGKKGENVKRIRRESGATLSV--ADPVLGC---DER 76
Query: 291 MVQISGK 297
+V I G+
Sbjct: 77 VVHIMGE 83
>gi|431898917|gb|ELK07287.1| Far upstream element-binding protein 3 [Pteropus alecto]
Length = 595
Score = 69.3 bits (168), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/328 (22%), Positives = 134/328 (40%), Gaps = 82/328 (25%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKIA 185
TV IL P+ K+G VIGK G +K L+E T K+ + +P ++ + I P K+
Sbjct: 163 TVQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 222
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
+ A++ +L++ + D F G+ SD + + +
Sbjct: 223 Q----------------------AREMVLEIIREKDQAD-FRGIRSDFTSRMGGGSIEVS 259
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P+ + A
Sbjct: 260 VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMGPPDRCQHAA 314
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST 365
+ ++ L+ +D +GG +A G W
Sbjct: 315 HIINELILTAQERD--------GFGG-------LAVARGRGRGRGDW------------- 346
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
MG+ PG + E++ A K G VIGKGG N+K + Q
Sbjct: 347 -----------SMGT-------PGGIQEIT------YTVPADKCGLVIGKGGENIKSINQ 382
Query: 426 ETGASIHVEDAPTDSDERVIRASAFEGL 453
++GA + ++ P + + +R G+
Sbjct: 383 QSGAHVELQRNPPPNTDPSLRVFTIRGV 410
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 160/432 (37%), Gaps = 123/432 (28%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P I +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQ------- 136
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
A+ L ++ DR F +D + NST+ +L+P + VG
Sbjct: 137 ---------------AKRLLGQIVDRCRNGPGF----HNDIDGNSTVQ-EILIPASKVGL 176
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G P ++A V ++
Sbjct: 177 VIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIR 233
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G D
Sbjct: 234 EKDQAD-----------------------------------------------FRGIRSD 246
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SRMG GSI P F++ I VIG+ G +K++Q + G I
Sbjct: 247 FTSRMGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 289
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF------------------- 474
+ S ER + + I+ ++ + F
Sbjct: 290 KPDDGISPERAAQVMGPPDRCQHAAHIINELILTAQERDGFGGLAVARGRGRGRGDWSMG 349
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ-DPHPGS--SE 531
+ G VP+ K G ++G+GG I + +++ GA V+LQ +P P + S
Sbjct: 350 TPGGIQEITYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPNTDPSL 402
Query: 532 CIVDIRGSSEHL 543
+ IRG + +
Sbjct: 403 RVFTIRGVPQQI 414
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q + G N G + A + + +G +IG+GG + ++Q
Sbjct: 48 PSVYGYGVQKRPLDDGVGNQL--GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQA 105
Query: 426 ETGASIHVEDAPTDSDER--VIRAS--AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
E+G I + + ER V+ + + E Q +D ++ T+
Sbjct: 106 ESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTV- 164
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+L+P+SKVG ++G+GG I +++ RT + ++
Sbjct: 165 QEILIPASKVGLVIGKGGETIKQLQERTGVKMVMI 199
>gi|221114013|ref|XP_002155770.1| PREDICTED: poly(rC)-binding protein 3-like [Hydra magnipapillata]
Length = 313
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 69/305 (22%), Positives = 127/305 (41%), Gaps = 80/305 (26%)
Query: 136 SRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSA 195
S+ GG+IGK G ++ +R+E+ A I V+ + ER++ I + +++
Sbjct: 14 SQDAGGIIGKEGRNIRQMRDESGANINVSGST--GVERILNIKGTSSEV----------- 60
Query: 196 AETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLL 255
K R++ E L ++ ++ +T RLLVPN+ G L+
Sbjct: 61 -------------------KSAVRMVAEKLQEILSGSNNEYVPPVTLRLLVPNSQCGPLI 101
Query: 256 GKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQN 315
GK G I+ +R +GA I +P++ LP +++ V ++G P + ++ + +
Sbjct: 102 GKGGQRIKEIREASGATI-TIPSETLPG---SSERSVTLAGSPEALGLCIAKIWDIFEEF 157
Query: 316 PRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQP 375
P + FP Y P M P + S + G S + +Q
Sbjct: 158 PARQNNVQYFPNMY--------PRSMG----------PHQLSVMSGQLSFTGLSRRSEQK 199
Query: 376 SRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
R+ S IG +IGKGG ++ +++Q +GA++HVE+
Sbjct: 200 VRLPSNV--------------------------IGSLIGKGGCHINEIRQFSGATVHVEE 233
Query: 436 APTDS 440
+ D+
Sbjct: 234 SKKDN 238
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 22/159 (13%)
Query: 391 MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF 450
M E E IL GG+IGK G N++Q++ E+GA+I+V + + ER++
Sbjct: 1 MAEEKLELHFIILSQ--DAGGIIGKEGRNIRQMRDESGANINV--SGSTGVERIL----- 51
Query: 451 EGLWNPRSQTIDAILQLQNKTSEFSEKGT------ITTRLLVPSSKVGCILGQGGHVINE 504
+ S+ A+ + K E +T RLLVP+S+ G ++G+GG I E
Sbjct: 52 -NIKGTSSEVKSAVRMVAEKLQEILSGSNNEYVPPVTLRLLVPNSQCGPLIGKGGQRIKE 110
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+R + A I + + PGSSE V + GS E L
Sbjct: 111 IREASGATITIP------SETLPGSSERSVTLAGSPEAL 143
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 32/163 (19%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTK--- 183
R+L P+ + G +IGK G +K +RE + A IT+ ++T+PGS ER + + SP
Sbjct: 86 VTLRLLVPNSQCGPLIGKGGQRIKEIREASGATITIPSETLPGSSERSVTLAGSPEALGL 145
Query: 184 -IAKTQNKDDDSAAETKK---------ESMEPHCAAQDALLKVHDRIIEEDL-FGGMASD 232
IAK + ++ A SM PH + ++ L F G++
Sbjct: 146 CIAKIWDIFEEFPARQNNVQYFPNMYPRSMGPHQLS----------VMSGQLSFTGLSRR 195
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
+ ++ +P+N++G L+GK G I +R +GA + V
Sbjct: 196 SEQ-------KVRLPSNVIGSLIGKGGCHINEIRQFSGATVHV 231
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 75/169 (44%), Gaps = 32/169 (18%)
Query: 377 RMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV--E 434
RM + + G E ++++L + G +IGKGG +K++++ +GA+I + E
Sbjct: 65 RMVAEKLQEILSGSNNEYVPPVTLRLLVPNSQCGPLIGKGGQRIKEIREASGATITIPSE 124
Query: 435 DAPTDSDERVIRASAFEGL-------WN-------------------PRSQTID--AILQ 466
P S+ V A + E L W+ PRS +++
Sbjct: 125 TLPGSSERSVTLAGSPEALGLCIAKIWDIFEEFPARQNNVQYFPNMYPRSMGPHQLSVMS 184
Query: 467 LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
Q + S + RL PS+ +G ++G+GG INE+R+ + A + V
Sbjct: 185 GQLSFTGLSRRSEQKVRL--PSNVIGSLIGKGGCHINEIRQFSGATVHV 231
>gi|115497150|ref|NP_001068751.1| poly(rC)-binding protein 4 [Bos taurus]
gi|119390858|sp|Q0VCU0.1|PCBP4_BOVIN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|111304931|gb|AAI20010.1| Poly(rC) binding protein 4 [Bos taurus]
gi|296474781|tpg|DAA16896.1| TPA: poly(rC)-binding protein 4 [Bos taurus]
Length = 403
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 136/321 (42%), Gaps = 60/321 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL-----HGMP 363
++ ++P K P G S + G + PA + L H +P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVT-PAEVTKLQQLSGHAVP 225
Query: 364 -STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
++P M G PS S S EF L IG VIG+ G + +
Sbjct: 226 FASPSM-VPGLDPSTQTS--------------SQEF----LVPNDLIGCVIGRQGSKISE 266
Query: 423 LQQETGASIHVEDAPTDSDER 443
++Q +GA I + + + ER
Sbjct: 267 IRQMSGAHIKIGNQAEGAGER 287
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 95 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFG-------- 227
P I + E+ + P + LL + + +G
Sbjct: 155 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVT 214
Query: 228 ---------------GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
M D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 215 KLQQLSGHAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 274
Query: 273 IRV 275
I++
Sbjct: 275 IKI 277
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|417410186|gb|JAA51570.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 376
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 88/354 (24%), Positives = 143/354 (40%), Gaps = 78/354 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 29 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 77
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 78 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 117
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 118 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 173
Query: 308 VSTLLHQNPRKDKP----------PSSFPQAY-GGQNFHSPPAPMADMHPLGNSSWPARN 356
+ ++ + + P PSS P + GGQ+ +S + A P S N
Sbjct: 174 ICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYSTGSDSASF-PHTTPSM-CLN 231
Query: 357 SSLHGMPSTPWM--GGYG-DQP-------------------SRMGSGSINSCPPGQMG-- 392
L G P + G Y QP G I S P G
Sbjct: 232 PDLEGPPLEAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGIESSSPEVKGYW 291
Query: 393 ---EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ S + + ++ IG +IG+ G N+ +++Q +GA I + + S R
Sbjct: 292 ASLDASTQTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGR 345
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 20 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 77
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 78 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 135
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 136 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 168
Score = 42.0 bits (97), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 301 THELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSA 353
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 354 ASISLAQYLINARLSSEKGM 373
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 11/63 (17%)
Query: 213 LLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
LL + +IE GG+ N T+T RLL+ VG ++GK+G+ ++++R E+GA
Sbjct: 10 LLNMDTGVIE----GGL-------NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGAR 58
Query: 273 IRV 275
I +
Sbjct: 59 INI 61
>gi|391348567|ref|XP_003748518.1| PREDICTED: poly(rC)-binding protein 3-like [Metaseiulus
occidentalis]
Length = 418
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 107/249 (42%), Gaps = 37/249 (14%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVAD-TIPGSEERVIIIYSS 180
N+ R++ +++G +IGK G+ +K RE++ AKI ++D T P ER++ + S
Sbjct: 6 NTPSVTLTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGTCP---ERIVTVTGS 62
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
I K + E S P E G +
Sbjct: 63 TECILKAFSLICAKFEEMSSLSGSP----------------TESALNGQKVLPGQTPPPV 106
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T RL+VP + G L+GK G I+ +R TGA+++V ++ LP +T+ V ++G +
Sbjct: 107 TLRLIVPASQCGSLIGKAGSKIREIREITGASVQVA-SEMLP---NSTERTVTVAGTADA 162
Query: 301 AKRALYEVSTLLHQNPRKDK----------PPSSFP--QAYGGQNFHSPPAP-MADMHPL 347
+ +Y++ ++ + P K PP F QAY Q ++ P P + +H L
Sbjct: 163 VTKCIYQICCVMLECPPKGATIPYRPKPAMPPVIFAGGQAYTVQGSYAIPHPDLTKLHQL 222
Query: 348 GNSSWPARN 356
P N
Sbjct: 223 ALQHAPLLN 231
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 82/162 (50%), Gaps = 20/162 (12%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP--------TDSDERVIR 446
S +++++ ++G +IGK G N+K+ ++++GA I++ D T S E +++
Sbjct: 9 SVTLTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDGTCPERIVTVTGSTECILK 68
Query: 447 A-----SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHV 501
A + FE + + ++ L Q K +T RL+VP+S+ G ++G+ G
Sbjct: 69 AFSLICAKFEEMSSLSGSPTESALNGQ-KVLPGQTPPPVTLRLIVPASQCGSLIGKAGSK 127
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
I E+R T A ++V + P S+E V + G+++ +
Sbjct: 128 IREIREITGASVQVASEML------PNSTERTVTVAGTADAV 163
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 7/63 (11%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +P+ +GC++G+GG INE+R+ + GA +K+ GS E V I G+
Sbjct: 306 TQEMQIPNDLIGCVIGKGGQKINEIRQLS-------GATIKISSTEEGSKERCVSISGTP 358
Query: 541 EHL 543
E +
Sbjct: 359 EAI 361
>gi|405957027|gb|EKC23265.1| Heterogeneous nuclear ribonucleoprotein K [Crassostrea gigas]
Length = 594
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 80/160 (50%), Gaps = 10/160 (6%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+ ++ L ++ G +IGKGG N+K+L+Q+ AS+ V D+ S ERV+ A L
Sbjct: 77 KVELRFLLASKNAGAIIGKGGSNIKRLRQDYKASVTVPDST--SPERVLTIGA--NLGTA 132
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+D I +L++ + + RLLV S+ GCI+G+ G I E+R RT A I+V
Sbjct: 133 LECVLDIIPKLEDYKNYKNNDFDCEMRLLVHQSQAGCIIGRAGFKIKELRERTGAQIKVY 192
Query: 517 GARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS 556
P S+E +V I G + ++ T + +
Sbjct: 193 SQCC------PESTERVVAIGGKPKIVVDCIETIHDLLQT 226
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 84/188 (44%), Gaps = 38/188 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R L S+ G +IGK G+ +K LR++ +A +TV D+ S ERV+ I ++
Sbjct: 81 RFLLASKNAGAIIGKGGSNIKRLRQDYKASVTVPDST--SPERVLTIGAN---------- 128
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
A + +L + ++ ED +D D E RLLV +
Sbjct: 129 ---------------LGTALECVLDIIPKL--EDYKNYKNNDFDCE-----MRLLVHQSQ 166
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
GC++G+ G I+ LR TGA I+V C +T+ +V I GKP + + +
Sbjct: 167 AGCIIGRAGFKIKELRERTGAQIKVYSQ----CCPESTERVVAIGGKPKIVVDCIETIHD 222
Query: 311 LLHQNPRK 318
LL P K
Sbjct: 223 LLQTAPPK 230
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 8/80 (10%)
Query: 474 FSEKGTI-TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSEC 532
F +G + +T++ +P G I+G+GG I E+RR++ A I + + PGS++
Sbjct: 464 FGNEGNLPSTQVTIPKDLAGAIIGKGGARIQEIRRQSNAQIVI-------DEGLPGSNDR 516
Query: 533 IVDIRGSSEHLISAHGTYQS 552
I+ I G+ E + SA QS
Sbjct: 517 IITITGTHEQIQSAQFLLQS 536
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 118 QSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIII 177
Q FGN + ++ P G +IGK G ++ +R ++ A+I + + +PGS +R+I I
Sbjct: 462 QMFGNEGNLPST-QVTIPKDLAGAIIGKGGARIQEIRRQSNAQIVIDEGLPGSNDRIITI 520
Query: 178 YSSPTKIAKTQ 188
+ +I Q
Sbjct: 521 TGTHEQIQSAQ 531
>gi|431913482|gb|ELK15157.1| Poly(rC)-binding protein 4 [Pteropus alecto]
Length = 403
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 135/321 (42%), Gaps = 60/321 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCSATANGGNISRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL-----HGMP 363
++ ++P K P G S + G + PA + L H +P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYG-AVTPAEVTKLQQLSGHAVP 225
Query: 364 -STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
++P M + PG + S + L IG VIG+ G + +
Sbjct: 226 FASPGM--------------VPGLDPG-----AQTSSQEFLVPNDLIGCVIGRQGSKISE 266
Query: 423 LQQETGASIHVEDAPTDSDER 443
++Q +GA I + + + ER
Sbjct: 267 IRQMSGAHIKIGNQAEGAGER 287
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 78/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 95 GNISRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFG-------- 227
P I + E+ + P + LL + + +G
Sbjct: 155 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVT 214
Query: 228 ---------------GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
GM D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 215 KLQQLSGHAVPFASPGMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 274
Query: 273 IRV 275
I++
Sbjct: 275 IKI 277
Score = 52.4 bits (124), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 75/158 (47%), Gaps = 18/158 (11%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGL 453
+S ++++L ++G +IGK G VK++++++ A I + + ER+ + G
Sbjct: 14 LSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERI---TTITGS 68
Query: 454 WNPRSQTIDAI-LQLQNKTSEFSEKGT------ITTRLLVPSSKVGCILGQGGHVINEMR 506
+ I +L + G +T RL++P+S+ G ++G+ G I E+R
Sbjct: 69 TAAVFHAVSMIAFKLDEDLCSATANGGNISRPPVTLRLVIPASQCGSLIGKAGTKIKEIR 128
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 129 ETTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|241956872|ref|XP_002421156.1| RNA binding protein, putative [Candida dubliniensis CD36]
gi|223644499|emb|CAX41315.1| RNA binding protein, putative [Candida dubliniensis CD36]
Length = 533
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 84/391 (21%), Positives = 152/391 (38%), Gaps = 99/391 (25%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+ CP ++ ++G+ G + LRE+ +ITV++ + G ER++ + +A+
Sbjct: 163 RMYCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVKGPAENVAR---- 218
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA-----RLL 245
A + I+EE ++E ++IT+ +LL
Sbjct: 219 ---------------------AFGLITRVILEEP---------EDEPASITSQQYNLKLL 248
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+P+ M+G ++GK+G + + + A ++ P +TD ++ + G + A+
Sbjct: 249 IPHPMIGFIIGKQGLKFREIEENSAAKLKAAEN----PLPYSTDRVLSVMGVGDAIHIAV 304
Query: 306 YEVSTLL------------------------HQN--PRKDKPP-SSFPQAYGGQN----F 334
Y ++ ++ HQN R+ PP +S+ G Q F
Sbjct: 305 YYIAQVMLEHKEVLKKNKVVLYNPANYQPTDHQNLGGRQRHPPNNSYNNPMGYQAKLPPF 364
Query: 335 HSPPAPMADMHPLGNSSW---PARNSSLHGMPST-----------------PWMGGYGDQ 374
PP N S PA G P T P Y D+
Sbjct: 365 SKPPHHSQHQQSPYNFSMMFQPAVQPQHFGTPVTSNPNAISPVGMQPSINVPPQNQYTDE 424
Query: 375 PSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 434
G + + PP Q G+ +++ + + IG VIGKGG N+K + +ET A +V+
Sbjct: 425 FGNTIVGEVITTPPVQAGQ--DKYNQDVFVANSSIGSVIGKGGNNIKHI-RETSACTYVK 481
Query: 435 DAPTDSDERVIRASAFEGLWNPRSQTIDAIL 465
P ++ +G+ N R T+ L
Sbjct: 482 IEPDKGQSMMLGGG--KGMTNIRKLTLTGSL 510
Score = 42.7 bits (99), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 46/229 (20%), Positives = 97/229 (42%), Gaps = 29/229 (12%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPR 457
+++ C + ++G+ G + L+++ I V + ER++ A +G
Sbjct: 160 IQLRMYCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIV---AVKGPAENV 216
Query: 458 SQTIDAILQLQNKTSEFSEKGTITT-----RLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
++ I ++ + E E +IT+ +LL+P +G I+G+ G E+ + A
Sbjct: 217 ARAFGLITRVILEEPE-DEPASITSQQYNLKLLIPHPMIGFIIGKQGLKFREIEENSAAK 275
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHL-ISAHGTYQSFMTSGQSMK------VQPS 565
++ ++P P S++ ++ + G + + I+ + Q + + +K P+
Sbjct: 276 LKAA------ENPLPYSTDRVLSVMGVGDAIHIAVYYIAQVMLEHKEVLKKNKVVLYNPA 329
Query: 566 SYQNINPQQSSCQTMSSHQSSYQNMNTQQS-------PYHRVNAQQSPY 607
+YQ + Q + +SY N Q+ P H QQSPY
Sbjct: 330 NYQPTDHQNLGGRQRHPPNNSYNNPMGYQAKLPPFSKPPHHSQHQQSPY 378
>gi|50292201|ref|XP_448533.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527845|emb|CAG61494.1| unnamed protein product [Candida glabrata]
Length = 460
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 84/385 (21%), Positives = 143/385 (37%), Gaps = 94/385 (24%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSP 181
N Q D R+LC ++ ++G G + L+E+T KI V+ I G ERVI + S
Sbjct: 75 NIQSQDISLRMLCLVKQASIIVGPKGESINKLKEQTSTKINVSPNIRGVPERVIHVKGSC 134
Query: 182 TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED------------LFGGM 229
+ K A K+ IIE+D
Sbjct: 135 ENVGK-------------------------AFGKIARIIIEKDSKNNANQSSSSLDSEAS 169
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
+ D E++T+ LL+ + ++G ++GK G ++ + + A + P + M+ D
Sbjct: 170 QNSSDAEDTTLILNLLISHALMGSVIGKGGSQLREIEERSAAKLYASPNQLM----MSND 225
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKD------------KPPSSFPQAYGGQNFHSP 337
++ I+G P+ A Y V+ L N R++ + S+ P +YG Q ++
Sbjct: 226 RILSITGVPDAIHIATYYVAQSL-LNCREELKQRKSIFYQPSQMGSALPNSYGAQMYNKF 284
Query: 338 PAPM-ADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSG----SINSCPPGQMG 392
P M HP+ + P RN H +P M PS G +N GQ+
Sbjct: 285 PHQMHHQYHPMDKYNTP-RNKKSHRLPRPQSMLANNVPPSINGHAFHDEYMNRPESGQIH 343
Query: 393 EVSAEFS----------------------------------MKILCSAGKIGGVIGKGGF 418
SA + I +G +IGK G
Sbjct: 344 YTSANVASAPSFTPTRNIPNVRIVDNPENNMAYSNPIAPVKQDIYIDENFVGNIIGKEGK 403
Query: 419 NVKQLQQETGASIHVEDAPTDSDER 443
++ +++ TG +I +++ ER
Sbjct: 404 HINSVKESTGCAIFIDNRIEGVSER 428
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 39/191 (20%), Positives = 87/191 (45%), Gaps = 24/191 (12%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS------ 448
S + S+++LC + ++G G ++ +L+++T I+V ERVI
Sbjct: 78 SQDISLRMLCLVKQASIIVGPKGESINKLKEQTSTKINVSPNIRGVPERVIHVKGSCENV 137
Query: 449 --AFEGLW---------NPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQ 497
AF + N +Q+ ++ ++ S +E T+ LL+ + +G ++G+
Sbjct: 138 GKAFGKIARIIIEKDSKNNANQSSSSLDSEASQNSSDAEDTTLILNLLISHALMGSVIGK 197
Query: 498 GGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL-ISAHGTYQSFMTS 556
GG + E+ R+ A + ++ + S++ I+ I G + + I+ + QS +
Sbjct: 198 GGSQLREIEERSAAKLYASPNQLMM------SNDRILSITGVPDAIHIATYYVAQSLLNC 251
Query: 557 GQSMKVQPSSY 567
+ +K + S +
Sbjct: 252 REELKQRKSIF 262
>gi|413935392|gb|AFW69943.1| hypothetical protein ZEAMMB73_108333 [Zea mays]
Length = 397
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 96/200 (48%), Gaps = 37/200 (18%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI--PGSEERVIIIYSSPT 182
P +V+R++ P+ K+GG+IG+ G+ +K L +ET+A++ V D G+ R++++
Sbjct: 95 PGASVFRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLV----- 149
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
SA E + + P A +A +K+ I E +D N + T+ A
Sbjct: 150 -----------SAREEVEAELSP---AMNAAIKIFKHINE--------IEDINSDGTLMA 187
Query: 243 --------RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
RLLVP ++GK+G I+ ++ TG+ +R++ D L + +V+I
Sbjct: 188 PAPEISSVRLLVPFAQALHVIGKQGVTIKSIQESTGSTVRIMDEDELLSHETMGERIVEI 247
Query: 295 SGKPNVAKRALYEVSTLLHQ 314
+G AL V LL +
Sbjct: 248 NGASLEVLNALKLVLGLLRK 267
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/196 (25%), Positives = 96/196 (48%), Gaps = 23/196 (11%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP--TDSDERVIRASAFEGLWNPR 457
+++ A K+GG+IG+ G +K+L ET A + V DAP + R++ SA E +
Sbjct: 100 FRLVVPADKVGGIIGRRGDTIKRLCDETRARVRVLDAPHGDGAFSRIVLVSAREEVEAEL 159
Query: 458 SQTIDAILQL---QNKTSEFSEKGTI--------TTRLLVPSSKVGCILGQGGHVINEMR 506
S ++A +++ N+ + + GT+ + RLLVP ++ ++G+ G I ++
Sbjct: 160 SPAMNAAIKIFKHINEIEDINSDGTLMAPAPEISSVRLLVPFAQALHVIGKQGVTIKSIQ 219
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA----HGTYQSFMTSGQSMKV 562
T + +R++ L H E IV+I G+S +++A G + F+ + +
Sbjct: 220 ESTGSTVRIMDEDELLS--HETMGERIVEINGASLEVLNALKLVLGLLRKFLVDHGVLHL 277
Query: 563 QPSSYQNINPQQSSCQ 578
++ NP+ + Q
Sbjct: 278 ----FERKNPEVAQPQ 289
>gi|297825693|ref|XP_002880729.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
gi|297326568|gb|EFH56988.1| hypothetical protein ARALYDRAFT_481452 [Arabidopsis lyrata subsp.
lyrata]
Length = 634
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 85/181 (46%), Gaps = 26/181 (14%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVI 175
S+G+ Q T +I P+ ++G +IGK G +K L+ ++ AKI V D P + R +
Sbjct: 127 SYGSFQ--GTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNATTRTV 184
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN 235
+ +P +I+K + D +E+ + A + D F
Sbjct: 185 DLTGTPDQISKAEQLITD----VLQEAEAGNTAGSGGGGRRMGGQAGADQF--------- 231
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
+ +PNN VG ++GK G+ I+ ++++TGA I+V+P LPP + +QI
Sbjct: 232 -------VMKIPNNKVGLIIGKGGETIKSMQAKTGARIQVIPL-HLPPGDPTPERTLQID 283
Query: 296 G 296
G
Sbjct: 284 G 284
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 16/149 (10%)
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
++G +IGKGG +K LQ ++GA I V DA ++ R + + + Q I +
Sbjct: 144 RVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNATTRTVDLTGTPDQISKAEQLITDV 203
Query: 465 LQLQNKTSEFSEKGTITTR----------LLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
LQ + G + +P++KVG I+G+GG I M+ +T A I+
Sbjct: 204 LQEAEAGNTAGSGGGGRRMGGQAGADQFVMKIPNNKVGLIIGKGGETIKSMQAKTGARIQ 263
Query: 515 VVGARVKLQDPHPGSSECIVDIRGSSEHL 543
V+ + DP P E + I G +E +
Sbjct: 264 VIPLHLPPGDPTP---ERTLQIDGITEQI 289
>gi|160333253|ref|NP_001103813.1| P-element somatic inhibitor [Bombyx mori]
gi|159031799|dbj|BAF91871.1| Bombyx homolog of P-element somatic inhibitor [Bombyx mori]
Length = 703
Score = 68.9 bits (167), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 76/341 (22%), Positives = 135/341 (39%), Gaps = 93/341 (27%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
+ +I + VP+ MVG ++G+ G+ I RL++E+G I++ P P N D + ++G
Sbjct: 99 DQSINEYIRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAP-----PTDGNPDRLCTLTG 153
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN 356
+ +RA V+ +++ R++ P
Sbjct: 154 SRDAIQRAKELVNQIVNHRGRENAP----------------------------------- 178
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
H PS P M SR G ++ +I+ K+G +IGK
Sbjct: 179 --QHQDPSEPGM-----NMSRPGPNAME----------------EIMIPGAKVGLIIGKN 215
Query: 417 GFNVKQLQQETGAS-IHVEDAPTDS----DERVIRASAFEGLWNPRSQTIDAIL---QLQ 468
G +KQLQ++TGA + ++D P ++ E+ +R S Q + +L +Q
Sbjct: 216 GKTIKQLQEQTGAKMVVIQDGPNENSFKPQEKPLRISGDPAKVEHAKQLVFELLANKDMQ 275
Query: 469 NKTSEFSEK----------GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGA 518
+ + T + +LVP +G ++G G +I ++ QAD G
Sbjct: 276 EPPRPYDDGYGGSDPGNGLATTSAEVLVPKVAIGVVIGHKGKMI----KKIQAD---TGC 328
Query: 519 RVKLQDPH---PGSSECIVDIRGSSEHLISAHGTYQSFMTS 556
RV+ H PG C ++G L A + ++S
Sbjct: 329 RVQFNQEHDEEPGDKLCY--LQGKPHQLDQARQMIEDLISS 367
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/191 (25%), Positives = 91/191 (47%), Gaps = 26/191 (13%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-----EERVIIIYSSP 181
+ + I+ P K+G +IGK G +K L+E+T AK+ V P +E+ + I P
Sbjct: 196 NAMEEIMIPGAKVGLIIGKNGKTIKQLQEQTGAKMVVIQDGPNENSFKPQEKPLRISGDP 255
Query: 182 TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
K+ + + A K+ EP + +D D +GG SD N +T +
Sbjct: 256 AKVEHAKQLVFELLA--NKDMQEPP--------RPYD-----DGYGG--SDPGNGLATTS 298
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
A +LVP +G ++G +G +I++++++TG ++ P D++ + GKP+
Sbjct: 299 AEVLVPKVAIGVVIGHKGKMIKKIQADTGCRVQFNQEHDEEP----GDKLCYLQGKPHQL 354
Query: 302 KRALYEVSTLL 312
+A + L+
Sbjct: 355 DQARQMIEDLI 365
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 18/202 (8%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKD 191
I P R +G +IG+ G + L+ E+ KI +A G+ +R+ + S I + +
Sbjct: 106 IRVPDRMVGLIIGRGGEQITRLQAESGCKIQMAPPTDGNPDRLCTLTGSRDAIQRAKELV 165
Query: 192 DDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMV 251
+ +E+ H + GM N+ +++P V
Sbjct: 166 NQIVNHRGRENAPQHQDPSEP---------------GMNMSRPGPNA--MEEIMIPGAKV 208
Query: 252 GCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTL 311
G ++GK G I++L+ +TGA + V+ ++ ++ISG P + A V L
Sbjct: 209 GLIIGKNGKTIKQLQEQTGAKMVVIQDGPNENSFKPQEKPLRISGDPAKVEHAKQLVFEL 268
Query: 312 LHQNPRKDKPPSSFPQAYGGQN 333
L N +PP + YGG +
Sbjct: 269 LA-NKDMQEPPRPYDDGYGGSD 289
>gi|169622886|ref|XP_001804851.1| hypothetical protein SNOG_14668 [Phaeosphaeria nodorum SN15]
gi|160704873|gb|EAT77860.2| hypothetical protein SNOG_14668 [Phaeosphaeria nodorum SN15]
Length = 357
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 80/332 (24%), Positives = 152/332 (45%), Gaps = 48/332 (14%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVII 176
EQ + +SQ R + S++ G +IGKAG V LR+ET + V+ + G +RV+
Sbjct: 37 EQEYADSQ---LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLS 93
Query: 177 IYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE 236
+ S + I+K + LL D + G + +D ++
Sbjct: 94 VTGSLSGISKA------------------YGLVAKGLL---DGAPAMGMGGVVRTDGTHQ 132
Query: 237 NS-TITA-RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
T+TA RLL+ +N +G ++G++G I++++ +G +R++ + P +T+ +V++
Sbjct: 133 RKLTVTAIRLLISHNQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLP--QSTERIVEV 188
Query: 295 SGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPA 354
G P+ ++A++E+ L + + YG ++ PA A +G S+
Sbjct: 189 QGSPSSIEKAIWEIGKCLIDD---------HERGYGTVLYN--PAGGATAGGMGGRSYNR 237
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF-SMKILCSAGKIGGVI 413
+ S P R GS + + PP E E + I + +G +I
Sbjct: 238 TGNGADFSDSAPT-----SYSRRSGSDAASRPPPPTHDEDGVELQTQNISIPSDMVGCII 292
Query: 414 GKGGFNVKQLQQETGASIHVEDAP-TDSDERV 444
G+GG + ++++ +GA I + AP D+ ER+
Sbjct: 293 GRGGSKISEIRKTSGARISIAKAPHDDTGERM 324
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 50/227 (22%), Positives = 94/227 (41%), Gaps = 35/227 (15%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPT---- 182
T R+L ++G +IG+ G +K +++ + ++ + +P S ER++ + SP+
Sbjct: 138 TAIRLLISHNQMGTIIGRQGLKIKQIQDASGVRMVAQKEMLPQSTERIVEVQGSPSSIEK 197
Query: 183 ---KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMA--------- 230
+I K D + T + A + ++R F A
Sbjct: 198 AIWEIGKCLIDDHERGYGTVLYNPAGGATAGGMGGRSYNRTGNGADFSDSAPTSYSRRSG 257
Query: 231 ----------SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
+ D++ T + +P++MVGC++G+ G I +R +GA I + A
Sbjct: 258 SDAASRPPPPTHDEDGVELQTQNISIPSDMVGCIIGRGGSKISEIRKTSGARISIAKA-- 315
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQ 327
P + M I+G ++ALY LL++N +K S Q
Sbjct: 316 --PHDDTGERMFTITGSATANEKALY----LLYENLEAEKMRRSQAQ 356
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 77/170 (45%), Gaps = 17/170 (10%)
Query: 381 GSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS 440
G + P + ++ +++ + S+ + G +IGK G NV L+ ETG V
Sbjct: 28 GEADVVPRTEQEYADSQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGV 87
Query: 441 DERVIRAS-AFEGLWNPRSQTIDAILQ---------LQNKTSEFSEKGTITT-RLLVPSS 489
+RV+ + + G+ +L + K T+T RLL+ +
Sbjct: 88 HDRVLSVTGSLSGISKAYGLVAKGLLDGAPAMGMGGVVRTDGTHQRKLTVTAIRLLISHN 147
Query: 490 KVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
++G I+G+ G I ++ + + +R+V + L P S+E IV+++GS
Sbjct: 148 QMGTIIGRQGLKIKQI--QDASGVRMVAQKEML----PQSTERIVEVQGS 191
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +PS VGCI+G+GG I+E+R+ + A I + A PH + E + I GS+
Sbjct: 278 TQNISIPSDMVGCIIGRGGSKISEIRKTSGARISIAKA------PHDDTGERMFTITGSA 331
>gi|6754994|ref|NP_035995.1| poly(rC)-binding protein 1 [Mus musculus]
gi|62751650|ref|NP_001015565.1| poly(rC)-binding protein 1 [Bos taurus]
gi|126723096|ref|NP_001075593.1| poly(rC)-binding protein 1 [Oryctolagus cuniculus]
gi|222352151|ref|NP_006187.2| poly(rC)-binding protein 1 [Homo sapiens]
gi|379642963|ref|NP_001243850.1| poly(rC)-binding protein 1 [Equus caballus]
gi|114577924|ref|XP_515530.2| PREDICTED: poly(rC)-binding protein 1 isoform 3 [Pan troglodytes]
gi|296223628|ref|XP_002757702.1| PREDICTED: poly(rC)-binding protein 1-like [Callithrix jacchus]
gi|297667414|ref|XP_002811975.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Pongo abelii]
gi|301758216|ref|XP_002914950.1| PREDICTED: poly(rC)-binding protein 1-like [Ailuropoda melanoleuca]
gi|332226765|ref|XP_003262561.1| PREDICTED: poly(rC)-binding protein 1 [Nomascus leucogenys]
gi|348566575|ref|XP_003469077.1| PREDICTED: poly(rC)-binding protein 1-like [Cavia porcellus]
gi|354491739|ref|XP_003508012.1| PREDICTED: poly(rC)-binding protein 1-like [Cricetulus griseus]
gi|395731716|ref|XP_003775951.1| PREDICTED: poly(rC)-binding protein 1 isoform 2 [Pongo abelii]
gi|395841306|ref|XP_003793486.1| PREDICTED: poly(rC)-binding protein 1 [Otolemur garnettii]
gi|402891162|ref|XP_003908824.1| PREDICTED: poly(rC)-binding protein 1 [Papio anubis]
gi|410954989|ref|XP_003984141.1| PREDICTED: poly(rC)-binding protein 1 [Felis catus]
gi|426223390|ref|XP_004005858.1| PREDICTED: poly(rC)-binding protein 1 [Ovis aries]
gi|426335835|ref|XP_004029412.1| PREDICTED: poly(rC)-binding protein 1 [Gorilla gorilla gorilla]
gi|12230408|sp|O19048.1|PCBP1_RABIT RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42559420|sp|P60335.1|PCBP1_MOUSE RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1
gi|42560548|sp|Q15365.2|PCBP1_HUMAN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E1; Short=hnRNP E1; AltName: Full=Nucleic acid-binding
protein SUB2.3
gi|75040221|sp|Q5E9A3.1|PCBP1_BOVIN RecName: Full=Poly(rC)-binding protein 1; AltName: Full=Alpha-CP1
gi|2134737|pir||S58529 alpha-complex protein 1 - human
gi|5805273|gb|AAD51920.1|AF139894_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|5805275|gb|AAD51921.1|AF139895_1 RNA-binding protein alpha-CP1 [Mus musculus]
gi|1215671|gb|AAA91317.1| alpha-CP1 [Homo sapiens]
gi|2644966|emb|CAA05814.1| hnRNP-E1 protein [Oryctolagus cuniculus]
gi|13435897|gb|AAH04793.1| Poly(rC) binding protein 1 [Mus musculus]
gi|24980783|gb|AAH39742.1| Poly(rC) binding protein 1 [Homo sapiens]
gi|47124405|gb|AAH69915.1| Poly(rC) binding protein 1 [Mus musculus]
gi|59858399|gb|AAX09034.1| poly(rC) binding protein 1 [Bos taurus]
gi|62702265|gb|AAX93191.1| unknown [Homo sapiens]
gi|119620240|gb|EAW99834.1| poly(rC) binding protein 1 [Homo sapiens]
gi|148666767|gb|EDK99183.1| mCG130511 [Mus musculus]
gi|189054893|dbj|BAG36897.1| unnamed protein product [Homo sapiens]
gi|208968661|dbj|BAG74169.1| poly(rC) binding protein 1 [synthetic construct]
gi|281346699|gb|EFB22283.1| hypothetical protein PANDA_002891 [Ailuropoda melanoleuca]
gi|296482414|tpg|DAA24529.1| TPA: poly(rC)-binding protein 1 [Bos taurus]
gi|312151908|gb|ADQ32466.1| poly(rC) binding protein 1 [synthetic construct]
gi|344250809|gb|EGW06913.1| Poly(rC)-binding protein 1 [Cricetulus griseus]
gi|355565760|gb|EHH22189.1| hypothetical protein EGK_05412 [Macaca mulatta]
gi|355751386|gb|EHH55641.1| hypothetical protein EGM_04885 [Macaca fascicularis]
gi|380813262|gb|AFE78505.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|380813264|gb|AFE78506.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|383418769|gb|AFH32598.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384940310|gb|AFI33760.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|384947378|gb|AFI37294.1| poly(rC)-binding protein 1 [Macaca mulatta]
gi|410262902|gb|JAA19417.1| poly(rC) binding protein 1 [Pan troglodytes]
gi|431912608|gb|ELK14626.1| Poly(rC)-binding protein 1 [Pteropus alecto]
gi|444723406|gb|ELW64063.1| Poly(rC)-binding protein 1 [Tupaia chinensis]
Length = 356
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 143/347 (41%), Gaps = 72/347 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 161
Query: 308 VSTLLHQN------------PRKDKPPSSFPQAYGGQNFHSPPA--PMADMHPLGNSSWP 353
+ ++ + P + P SS GGQ+ S A P A H L P
Sbjct: 162 ICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT-HDL--EGPP 218
Query: 354 ARNSSLHGMPS-TPWMGGYGDQPSR-----------MGSGSINSCPPGQMG-----EVSA 396
S+ G + +P +Q +R G I+S P G + S
Sbjct: 219 LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDAST 278
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ + ++ IG +IG+ G N+ +++Q +GA I + + S R
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGR 325
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTERAITIAG 150
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSA 333
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 334 ASISLAQYLINARLSSEKGM 353
>gi|351714348|gb|EHB17267.1| Poly(rC)-binding protein 1 [Heterocephalus glaber]
Length = 355
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 143/347 (41%), Gaps = 72/347 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 64
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 65 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 104
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 105 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 160
Query: 308 VSTLLHQN------------PRKDKPPSSFPQAYGGQNFHSPPA--PMADMHPLGNSSWP 353
+ ++ + P + P SS GGQ+ S A P A H L P
Sbjct: 161 ICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT-HDL--EGPP 217
Query: 354 ARNSSLHGMPS-TPWMGGYGDQPSR-----------MGSGSINSCPPGQMG-----EVSA 396
S+ G + +P +Q +R G I+S P G + S
Sbjct: 218 LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDAST 277
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ + ++ IG +IG+ G N+ +++Q +GA I + + S R
Sbjct: 278 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGR 324
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 9 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 66
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 67 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 126
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 127 GAQVQVAG------DMLPNSTERAITIAG 149
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 10 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 48
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 280 THELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSA 332
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 333 ASISLAQYLINARLSSEKGM 352
>gi|383862495|ref|XP_003706719.1| PREDICTED: poly(rC)-binding protein 4-like isoform 2 [Megachile
rotundata]
Length = 560
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/199 (29%), Positives = 95/199 (47%), Gaps = 33/199 (16%)
Query: 122 NSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYS 179
N P+ T+ R++ +++G +IGK G IVK REE+ AKI ++D GS ER++ +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTG 67
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
I K A + E C+ + HD + S
Sbjct: 68 PTNSIFK--------AFTLICKKFEEWCS------QFHD----------IQSGGGVPRPP 103
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
IT RL+VP + G L+GK G I+ +R TGA+I+V ++ LP +T+ V ISG
Sbjct: 104 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTISGTSE 159
Query: 300 VAKRALYEVSTLLHQNPRK 318
+ +Y + ++ ++P K
Sbjct: 160 AITQCIYHICCVMLESPPK 178
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 26/161 (16%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G VK+ ++E+GA I++ D ER++ +
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG----- 67
Query: 455 NPRSQTIDAILQLQNKTSEFSE------------KGTITTRLLVPSSKVGCILGQGGHVI 502
P + A + K E+ + IT RL+VP+S+ G ++G+GG I
Sbjct: 68 -PTNSIFKAFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKI 126
Query: 503 NEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
E+R T A I+V + P S+E V I G+SE +
Sbjct: 127 KEIREVTGASIQVASEML------PNSTERAVTISGTSEAI 161
Score = 45.8 bits (107), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + VPN ++GC++GK G I +R +GA IR+ + A TD + I+G P+
Sbjct: 367 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 424
Query: 301 AKRALYEVS 309
A Y +S
Sbjct: 425 VALAQYLIS 433
Score = 43.9 bits (102), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 2/94 (2%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSL 153
N+ FK ++ K W + + G P + R++ P+ + G +IGK G+ +K +
Sbjct: 70 NSIFKAFTLICKKFEEWCSQFHDIQSGGGVPRPPITLRLIVPASQCGSLIGKGGSKIKEI 129
Query: 154 REETQAKITVA-DTIPGSEERVIIIYSSPTKIAK 186
RE T A I VA + +P S ER + I + I +
Sbjct: 130 REVTGASIQVASEMLPNSTERAVTISGTSEAITQ 163
>gi|147818796|emb|CAN67284.1| hypothetical protein VITISV_021596 [Vitis vinifera]
Length = 332
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKI 184
T +I P+ ++G +IGK G +K L+ ++ AKI V D P S R++ + +P +I
Sbjct: 97 TSKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQI 156
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
AK + +D +E + I+ L G S+ +
Sbjct: 157 AKAEQLINDVLSEAEAGG---------------SGIVSRRLTGQAGSEQ--------FVM 193
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
VPNN VG ++GK G+ I+ +++ TGA I+V+P LPP + + VQI G
Sbjct: 194 KVPNNKVGLIIGKGGETIKNMQARTGARIQVIPL-HLPPGDTSMERTVQIDG 244
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 78/163 (47%), Gaps = 21/163 (12%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIRASAFEGLWN 455
S KI G++G +IGKGG +K LQ ++GA I V DA +S R++
Sbjct: 98 SKKIDIPNGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPTRLVELMGTPDQIA 157
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITTRLL-----------VPSSKVGCILGQGGHVINE 504
Q I+ +L +E G ++ RL VP++KVG I+G+GG I
Sbjct: 158 KAEQLINDVL----SEAEAGGSGIVSRRLTGQAGSEQFVMKVPNNKVGLIIGKGGETIKN 213
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAH 547
M+ RT A I+V+ + P S E V I G+SE + SA
Sbjct: 214 MQARTGARIQVIPLHLP---PGDTSMERTVQIDGTSEQIESAK 253
>gi|397521888|ref|XP_003831016.1| PREDICTED: poly(rC)-binding protein 1 [Pan paniscus]
Length = 455
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/349 (24%), Positives = 144/349 (41%), Gaps = 72/349 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 116 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 164
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 165 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 204
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 205 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 260
Query: 308 VSTLLHQN------------PRKDKPPSSFPQAYGGQNFHSPPA--PMADMHPLGNSSWP 353
+ ++ + P + P SS GGQ+ S A P A H L P
Sbjct: 261 ICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT-HDLEGP--P 317
Query: 354 ARNSSLHGMPS-TPWMGGYGDQPSR-----------MGSGSINSCPPGQMG-----EVSA 396
S+ G + +P +Q +R G I+S P G + S
Sbjct: 318 LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDAST 377
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+ + ++ IG +IG+ G N+ +++Q +GA I + + S R +
Sbjct: 378 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGRQV 426
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 84/150 (56%), Gaps = 12/150 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FE 451
E++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 108 ELNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTN 165
Query: 452 GLWNPRSQTIDAILQLQNKT---SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
++ + ID + + N + S + + +T RL+VP+++ G ++G+GG I E+R
Sbjct: 166 AIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIRES 225
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T A ++V G D P S+E + I G
Sbjct: 226 TGAQVQVAG------DMLPNSTERAITIAG 249
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 43/68 (63%), Gaps = 3/68 (4%)
Query: 209 AQDALLKVHDRIIEEDLFGGMASDDDNE-NSTITARLLVPNNMVGCLLGKRGDVIQRLRS 267
AQ +++ ++ GG+ D++NE N T+T RLL+ VG ++GK+G+ ++R+R
Sbjct: 83 AQTSIMGTLAKVKLTGPTGGL--DEENELNVTLTIRLLMHGKEVGSIIGKKGESVKRIRE 140
Query: 268 ETGANIRV 275
E+GA I +
Sbjct: 141 ESGARINI 148
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 380 THELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSA 432
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 433 ASISLAQYLINARLSSEKGM 452
Score = 40.0 bits (92), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 5/72 (6%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T L +PNN++GC++G++G I +R +GA I++ P ++ V I+G
Sbjct: 380 THELTIPNNLIGCIIGRQGANINEIRQMSGAQIKI-----ANPVEGSSGRQVTITGSAAS 434
Query: 301 AKRALYEVSTLL 312
A Y ++ L
Sbjct: 435 ISLAQYLINARL 446
>gi|354490197|ref|XP_003507246.1| PREDICTED: poly(rC)-binding protein 2 isoform 4 [Cricetulus
griseus]
Length = 322
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/337 (24%), Positives = 139/337 (41%), Gaps = 85/337 (25%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
+A+ K II EED+ M + +T RL+V
Sbjct: 66 ---------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVK 160
Query: 307 EVSTLLHQNPRKDKP----------PSSFP------QAYGGQNFHSPPAP-MADMHPLG- 348
++ ++ + + P PSS P QAY Q ++ P P + +H L
Sbjct: 161 QICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAM 220
Query: 349 -NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAE-FSMKILCSA 406
S +P HG +T + G + SA+ S ++
Sbjct: 221 QQSHFPMT----HG--NTGFSAGL---------------------DASAQTTSHELTIPN 253
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
IG +IG+ G + +++Q +GA I + S +R
Sbjct: 254 DLIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDR 290
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/253 (25%), Positives = 106/253 (41%), Gaps = 41/253 (16%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKES----------- 202
E T A++ VA D +P S ER I I P I + + ET +S
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 203 -----------------MEPHCAAQDALLKVHDRIIEEDLF------GGMASDDDNENST 239
+ Q L K+H +++ F G ++ D T
Sbjct: 185 KPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSAGLDASAQT 244
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ L +PN+++GC++G++G I +R +GA I+ P +TD V I+G
Sbjct: 245 TSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKT-----ANPVEGSTDRQVTITGSAA 299
Query: 300 VAKRALYEVSTLL 312
A Y ++ L
Sbjct: 300 SISLAQYLINVRL 312
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K +P GS++ V I G
Sbjct: 244 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKTANPVEGSTDRQVTITG 296
Query: 539 SSEHL 543
S+ +
Sbjct: 297 SAASI 301
>gi|345564609|gb|EGX47569.1| hypothetical protein AOL_s00083g77 [Arthrobotrys oligospora ATCC
24927]
Length = 459
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 80/370 (21%), Positives = 141/370 (38%), Gaps = 98/370 (26%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R L S + VIGK G V +R ++AK TV++ G+ ER++ +
Sbjct: 106 RALITSAEAATVIGKGGENVTQIRRLSEAKCTVSEYTRGAVERILTV------------- 152
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
DA+ K II ++S + T RLL+P+ +
Sbjct: 153 ----------------SGGVDAVAKAFGLIIRTINSEPLSSASTQNSKTFPLRLLIPHIL 196
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++GK G I+ ++ +GA R+ +D P ++T+ + + G + A Y V+T
Sbjct: 197 IGSIIGKGGMRIREIQDASGA--RLNASDSCLP--LSTERSLMVVGVADAVHIATYYVAT 252
Query: 311 LL-----------------------------------------------------HQNPR 317
L H N
Sbjct: 253 TLVEQLTERFGGPAASAYASRSGGPAGAVPGGMQVVPYTPQPAFGNYGHPDNYRRHNNQA 312
Query: 318 KDKP--PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQP 375
+ P P P +G P AP+ P S+ PA + + P+ P G + P
Sbjct: 313 QRTPANPYGIPYLHGQPPVQQPAAPIHYADP---SAQPAYSGAGPHQPTVPHHGAH-TGP 368
Query: 376 SRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
+ G G++ + PG A + +I +G +IGKGG + +++Q +G+ I + +
Sbjct: 369 AAQGHGNMAAMIPG------APLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINE 422
Query: 436 APTDSDERVI 445
+S+ER++
Sbjct: 423 PQDNSNERLV 432
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
++ L ++ + VIGKGG NV Q+++ + A V + + ER++ S G + ++
Sbjct: 105 VRALITSAEAATVIGKGGENVTQIRRLSEAKCTVSEYTRGAVERILTVS---GGVDAVAK 161
Query: 460 TIDAILQLQN----KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
I++ N ++ T RLL+P +G I+G+GG I E++ +
Sbjct: 162 AFGLIIRTINSEPLSSASTQNSKTFPLRLLIPHILIGSIIGKGGMRIREIQDAS------ 215
Query: 516 VGARVKLQD 524
GAR+ D
Sbjct: 216 -GARLNASD 223
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 7/62 (11%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+T ++ +P+ VG I+G+GG INE+R ++ G+ +K+ +P S+E +V I G+
Sbjct: 385 LTQQIYIPNDMVGAIIGKGGAKINEIR-------QLSGSVIKINEPQDNSNERLVTITGT 437
Query: 540 SE 541
E
Sbjct: 438 QE 439
>gi|12837891|dbj|BAB23990.1| unnamed protein product [Mus musculus]
Length = 403
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/358 (24%), Positives = 144/358 (40%), Gaps = 76/358 (21%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGSVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFP------------QAYG--GQNFHSPPAPMADMHPLGNSSWPA 354
++ ++P K P Q + GQ PA + + L + P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPF 226
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
+ S+ +P G PS S S EF L IG VIG
Sbjct: 227 ASPSV--VP--------GLDPSTQTS--------------SQEF----LVPNDLIGCVIG 258
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTS 472
+ G + +++Q +GA I + + + ER + + I A L+ N TS
Sbjct: 259 RQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITACLETANSTS 316
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|45553235|ref|NP_996145.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|194876029|ref|XP_001973701.1| GG16232 [Drosophila erecta]
gi|195496648|ref|XP_002095782.1| GE22592 [Drosophila yakuba]
gi|16648354|gb|AAL25442.1| LD32520p [Drosophila melanogaster]
gi|45446078|gb|AAS65095.1| mushroom-body expressed, isoform C [Drosophila melanogaster]
gi|190655484|gb|EDV52727.1| GG16232 [Drosophila erecta]
gi|194181883|gb|EDW95494.1| GE22592 [Drosophila yakuba]
gi|220951950|gb|ACL88518.1| mub-PC [synthetic construct]
Length = 364
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 63/349 (18%)
Query: 106 IKKGNWSNSSREQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA 164
++ N S+S+ S + P+ T+ R++ +++G +IGK G IV REE+ AKI ++
Sbjct: 1 MEDNNTSSSAGGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINIS 60
Query: 165 DTIPGS-EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE 223
D GS ER++ + + I SA + E C+ + + KV
Sbjct: 61 D---GSCPERIVTVSGTTNAIF--------SAFTLITKKFEEWCSQFNDVGKVGK----- 104
Query: 224 DLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP 283
+ I RL+VP + G L+GK G I+ +R TG +I+V ++ LP
Sbjct: 105 --------------TQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV-ASEMLPN 149
Query: 284 CAMNTDEMVQISGKPNVAKRALYEVSTLLHQN-------PRKDKPPSSFP------QAYG 330
+T+ V +SG + +Y++ ++ ++ P + KP + P QA+
Sbjct: 150 ---STERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANGQAFT 206
Query: 331 GQNFHSPPAPMADMHPLGNSSWPARN----SSLHGMPSTPWMGGYGDQPSRMGSGSINSC 386
Q ++ P +PL + + +S G+ T + R +
Sbjct: 207 IQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRTAN------ 260
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
P + + E ++ S IG +IGKGG + +++Q +GA I + +
Sbjct: 261 PANRAQQQQHEMTV----SNDLIGCIIGKGGTKIAEIRQISGAMIRISN 305
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G V + ++E+GA I++ D ER++ S G
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVS---GTT 75
Query: 455 NPRSQTIDAILQ-LQNKTSEFSEKGT-----ITTRLLVPSSKVGCILGQGGHVINEMRRR 508
N I + + S+F++ G I RL+VP+S+ G ++G+ G I E+R+
Sbjct: 76 NAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQT 135
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
T I+V + P S+E V + GS+E +
Sbjct: 136 TGCSIQVASEML------PNSTERAVTLSGSAEQI 164
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
+ V N+++GC++GK G I +R +GA IR+ + NTD + ISG P+
Sbjct: 271 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERE--GGNTDRTITISGNPDSVA 328
Query: 303 RALYEVS 309
A Y ++
Sbjct: 329 LAQYLIN 335
>gi|358368755|dbj|GAA85371.1| KH domain RNA-binding protein [Aspergillus kawachii IFO 4308]
Length = 360
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/311 (22%), Positives = 139/311 (44%), Gaps = 37/311 (11%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGK+G V LR+ET K V+ +PG +RV+ + A+
Sbjct: 46 RAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLNGTARA--- 102
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ LL+ ++ GG+ S+ N T RLL+ +N
Sbjct: 103 ---------------YALVAKGLLEGAPQM----GMGGIVSN----NGTHPVRLLISHNQ 139
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 140 MGTIIGRQGLKIKHIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAVWEIGK 195
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPAR--NSSLHGMPSTPWM 368
L + ++ + A +P + +GN + +R N + +G +
Sbjct: 196 CLIDDWQRGTGTILYNPAVRASVGTTPSTSTMN-QSVGNG-YNSRPYNRTGNGADFSDQS 253
Query: 369 GGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETG 428
GGYG R + N P + + I A +G +IG+GG + ++++ +G
Sbjct: 254 GGYG---RRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSG 310
Query: 429 ASIHVEDAPTD 439
A I + AP D
Sbjct: 311 ARISIAKAPHD 321
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 383 INSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDE 442
I + P + + +++ + S+ + G +IGK G NV L+ ETG V +
Sbjct: 28 IETTPKTEEEYAQSMLTLRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHD 87
Query: 443 RVIRASA-FEGLWNPRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQG 498
RV+ + G + +L+ S GT RLL+ +++G I+G+
Sbjct: 88 RVLTVTGPLNGTARAYALVAKGLLEGAPQMGMGGIVSNNGTHPVRLLISHNQMGTIIGRQ 147
Query: 499 GHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
G I + + + +R+V + L P S+E IV+++G+ E + A
Sbjct: 148 GLKIKHI--QDASGVRMVAQKEML----PQSTERIVEVQGTPEGIEKA 189
Score = 42.4 bits (98), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P +MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 281 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKA----PHDETGERMFTIMGSAQA 336
Query: 301 AKRALYEVSTLLHQNPRKDK 320
++ALY LL++N +K
Sbjct: 337 NEKALY----LLYENLEAEK 352
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +P+ VGCI+G+GG I E+RR + A I + A PH + E + I GS+
Sbjct: 281 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKA------PHDETGERMFTIMGSA 334
Query: 541 E 541
+
Sbjct: 335 Q 335
>gi|344283688|ref|XP_003413603.1| PREDICTED: poly(rC)-binding protein 1-like [Loxodonta africana]
Length = 438
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 99/427 (23%), Positives = 167/427 (39%), Gaps = 111/427 (25%)
Query: 143 IGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKES 202
+G+ G VK +REE+ A+I +++ G+ II + PT
Sbjct: 111 LGRKGTSVKRIREESGARINISE---GNCPERIITLTGPT-------------------- 147
Query: 203 MEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRG 259
+A+ K II EED+ M + +T RL+VP G L+GK G
Sbjct: 148 --------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGG 199
Query: 260 DVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKD 319
I+ +R TGA ++V D LP +T+ + I+G P + ++ ++ +
Sbjct: 200 CKIKEIRESTGAQVQVA-GDMLP---NSTERAITIAGVPQSVTECVKQICLVMLE----- 250
Query: 320 KPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST------PWMGGYGD 373
+ Q+ G+ P PM P+ + R S G P P + Y
Sbjct: 251 ----TLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHATHDLEGPPLDAYSI 306
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
Q G +I+ ++ +V+ + S + G GF
Sbjct: 307 Q----GQHTISPLDLAKLNQVARQQSHFAMLHGGT--------GF--------------- 339
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGC 493
A DS ++ G W ++DA Q T L +P++ +GC
Sbjct: 340 --AGIDSSSPEVK-----GYW----ASLDASTQ-------------TTHELTIPNNLIGC 375
Query: 494 ILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSF 553
I+G+ G INE+R+ + GA++K+ +P GSS V I GS+ + A +
Sbjct: 376 IIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSAASISLAQYLINAR 428
Query: 554 MTSGQSM 560
++S + M
Sbjct: 429 LSSEKGM 435
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 2/93 (2%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K NSS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 148 NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTL-RLVVPATQCGSLIGKGGCKIKEIR 206
Query: 155 EETQAKITVA-DTIPGSEERVIIIYSSPTKIAK 186
E T A++ VA D +P S ER I I P + +
Sbjct: 207 ESTGAQVQVAGDMLPNSTERAITIAGVPQSVTE 239
>gi|320591828|gb|EFX04267.1| kh domain containing RNA-binding protein [Grosmannia clavigera
kw1407]
Length = 476
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/380 (22%), Positives = 142/380 (37%), Gaps = 103/380 (27%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S + +IGK G V +R+ + AK TV+D G+ ER++ +
Sbjct: 120 RAVISSPEAATIIGKGGENVSKIRQMSNAKCTVSDYQKGAVERILTV------------- 166
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
DA+ K II + + + T RLL+P+ +
Sbjct: 167 ----------------SGVVDAVAKAFGLIIRTLNNEPLGEPSNAHSKTYPLRLLIPHIL 210
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV-S 309
+G ++GK G I+ ++ +GA R+ +D P M+++ + + G + A Y V S
Sbjct: 211 IGSIIGKGGSRIKEIQEASGA--RLNASDSCLP--MSSERSLVVMGVADAVHIATYYVGS 266
Query: 310 TLLH----------------------------------------------------QNPR 317
TLL Q+PR
Sbjct: 267 TLLEQLNERFGGPAASAYAARGGGPVGVVPGGMQVVPYLPQPAGGSYGRTENYSRRQDPR 326
Query: 318 KDKPPSSFPQAYGGQNFHSP-PA-PMADMHPLGNSS---WPARNSSLHG-MPSTPWMGGY 371
PP + YG H P PA PM G P +N++ HG MP P G
Sbjct: 327 AQLPPQGYGAPYGAPIAHGPGPAVPMYGAQAAGAYGAPQLPHQNAAHHGAMPHGPHAG-- 384
Query: 372 GDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASI 431
QP G G G A + +I +G +IGKGG + +++Q +G+ I
Sbjct: 385 --QPPHAGPG-------GHPAMAGAPLTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVI 435
Query: 432 HVEDAPTDSDERVIRASAFE 451
+ + +S+ER++ + E
Sbjct: 436 KINEPQDNSNERLVTITGTE 455
Score = 46.6 bits (109), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 71/153 (46%), Gaps = 18/153 (11%)
Query: 380 SGSINSCP----PGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
+ S N+ P P + ++ ++ + S+ + +IGKGG NV +++Q + A V D
Sbjct: 95 TASSNTAPSQTAPANAHDETSWIHIRAVISSPEAATIIGKGGENVSKIRQMSNAKCTVSD 154
Query: 436 APTDSDERVIRASAFEGLWNPRSQTIDAILQLQNK----TSEFSEKGTITTRLLVPSSKV 491
+ ER++ S G+ + ++ I++ N + T RLL+P +
Sbjct: 155 YQKGAVERILTVS---GVVDAVAKAFGLIIRTLNNEPLGEPSNAHSKTYPLRLLIPHILI 211
Query: 492 GCILGQGGHVINEMRRRTQADIRVVGARVKLQD 524
G I+G+GG I E++ + GAR+ D
Sbjct: 212 GSIIGKGGSRIKEIQEAS-------GARLNASD 237
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 38/62 (61%), Gaps = 7/62 (11%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+T ++ +P+ VG I+G+GG INE+R +V G+ +K+ +P S+E +V I G+
Sbjct: 402 LTQQIYIPNDMVGAIIGKGGQKINEIR-------QVSGSVIKINEPQDNSNERLVTITGT 454
Query: 540 SE 541
E
Sbjct: 455 EE 456
Score = 39.7 bits (91), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV-LPADRLPPCAMNTDEMVQISGKP 298
+T ++ +PN+MVG ++GK G I +R +G+ I++ P D + + +V I+G
Sbjct: 402 LTQQIYIPNDMVGAIIGKGGQKINEIRQVSGSVIKINEPQDN------SNERLVTITGTE 455
Query: 299 NVAKRALYEVSTLL 312
+ ALY + + L
Sbjct: 456 ECNRMALYMLYSRL 469
>gi|339258170|ref|XP_003369271.1| putative KH domain protein [Trichinella spiralis]
gi|316966532|gb|EFV51093.1| putative KH domain protein [Trichinella spiralis]
Length = 640
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/339 (25%), Positives = 139/339 (41%), Gaps = 82/339 (24%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L S+ G VIGK G +K LR + A + + D+ + ERV+ I S +A +
Sbjct: 285 RLLIASKSAGAVIGKGGENIKRLRSQYCASVNIPDS--STPERVLNI--SCANVATLTD- 339
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
C + D + ++ D G + + E R+LV +
Sbjct: 340 ----------------CVS-DLIPRLDD---------GKSGPQEAE-----VRMLVHQSQ 368
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCA-MNTDEMVQISGKPNVAKRALYEVS 309
G ++G+ G I+ LR TGA IRV CA ++T+ ++Q SG A+ V
Sbjct: 369 AGAIIGRAGFKIKELRDITGAGIRVYSE-----CAPLSTERVIQFSGDKEKIVNAIRHVK 423
Query: 310 TLLHQNPRK--------DKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHG 361
+ + P K + S+ YGG D + NS+ R+S +H
Sbjct: 424 EICEETPIKGVERLYDANNYDMSYALDYGGYT--------TDRNWRSNST-TRRSSGIHS 474
Query: 362 ---MPSTPWMGGYGDQPSRMGSGSINSCPPGQ-MGEVSAEFSMKILCSAGKI-------G 410
STP G +N P Q +G + L + ++ G
Sbjct: 475 SSPAASTPHFTG------------VNEISPMQALGYSPMSLYAENLIATVQVTIPKELGG 522
Query: 411 GVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA 449
+IGKGG + ++++E+GA I V+ DSDER+I S
Sbjct: 523 TIIGKGGERINRIREESGAQIVVDPPTPDSDERIITISG 561
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 75/147 (51%), Gaps = 12/147 (8%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++L ++ G VIGKGG N+K+L+ + AS+++ D+ T ERV+ S +
Sbjct: 284 LRLLIASKSAGAVIGKGGENIKRLRSQYCASVNIPDSST--PERVLNISC-ANVATLTDC 340
Query: 460 TIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGAR 519
D I +L + S E R+LV S+ G I+G+ G I E+R T A IRV
Sbjct: 341 VSDLIPRLDDGKSGPQEA---EVRMLVHQSQAGAIIGRAGFKIKELRDITGAGIRVYS-- 395
Query: 520 VKLQDPHPGSSECIVDIRGSSEHLISA 546
+ P S+E ++ G E +++A
Sbjct: 396 ----ECAPLSTERVIQFSGDKEKIVNA 418
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 88/232 (37%), Gaps = 57/232 (24%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
G S P + R+L + G +IG+AG +K LR+ T A I V ++ P S ERVI
Sbjct: 351 GKSGPQEAEVRMLVHQSQAGAIIGRAGFKIKELRDITGAGIRVYSECAPLSTERVIQFSG 410
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD----- 234
KI + ET + +E A + +D D +GG +D +
Sbjct: 411 DKEKIVNAIRHVKEICEETPIKGVERLYDANN-----YDMSYALD-YGGYTTDRNWRSNS 464
Query: 235 ----------------------------------------NENSTITARLLVPNNMVGCL 254
EN T ++ +P + G +
Sbjct: 465 TTRRSSGIHSSSPAASTPHFTGVNEISPMQALGYSPMSLYAENLIATVQVTIPKELGGTI 524
Query: 255 LGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
+GK G+ I R+R E+GA I V PP + + ++ ISG + K Y
Sbjct: 525 IGKGGERINRIREESGAQIVV-----DPPTPDSDERIITISGTTSQIKLGQY 571
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 9/85 (10%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV--EDAPTDSDERVIRASAFEGLW 454
E +++L + G +IG+ GF +K+L+ TGA I V E AP S ERVI+ S
Sbjct: 357 EAEVRMLVHQSQAGAIIGRAGFKIKELRDITGAGIRVYSECAPL-STERVIQFSG----- 410
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGT 479
+ + ++AI ++ E KG
Sbjct: 411 -DKEKIVNAIRHVKEICEETPIKGV 434
>gi|189188542|ref|XP_001930610.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187972216|gb|EDU39715.1| Poly(rC)-binding protein 4 [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 364
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/344 (22%), Positives = 152/344 (44%), Gaps = 65/344 (18%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVII 176
E+ + SQ R + S++ G +IGKAG V LR+ET + V+ + G +RV+
Sbjct: 37 EEEYAESQ---LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLS 93
Query: 177 IYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE 236
+ S + I+K + A LL+ + GG+ D
Sbjct: 94 VTGSLSGISKA------------------YGLAAKGLLEGAPAM----GMGGVIRTD--- 128
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
T RLL+ +N +G ++G++G I++++ +G +R++ + P +T+ +V++ G
Sbjct: 129 -GTHPIRLLISHNQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLP--QSTERIVEVQG 183
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFH--------SPPAPMAD--MHP 346
P ++A++E+ L + + YG ++ + P P+++ P
Sbjct: 184 SPAGIEKAVWEIGKCLIDD---------HERGYGTVLYNPVVRVQPGAGPGPLSNGGSAP 234
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQP----SRMGSGSINSCPPGQMGEVSAEF-SMK 401
G+ + N + HG + D P R GS + + PP E E +
Sbjct: 235 SGSMGGRSYNRTGHGAD-------FSDSPPAFSRRSGSDAASRPPPPTHTEDGEEMQTQN 287
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP-TDSDERV 444
I + +G +IG+GG + ++++ + A I + AP D+ ER+
Sbjct: 288 ISIPSDMVGCIIGRGGTKISEIRKTSNARISIAKAPHDDTGERM 331
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLW 454
++ +++ + S+ + G +IGK G NV L+ ETG V +RV+ + + G+
Sbjct: 43 SQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSGIS 102
Query: 455 NPRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+L+ GT RLL+ +++G I+G+ G I ++ + +
Sbjct: 103 KAYGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKIKQI--QDAS 160
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGS 539
+R+V + L P S+E IV+++GS
Sbjct: 161 GVRMVAQKEML----PQSTERIVEVQGS 184
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R + A I + A P + M I+G +
Sbjct: 285 TQNISIPSDMVGCIIGRGGTKISEIRKTSNARISIAKA----PHDDTGERMFTITGSASA 340
Query: 301 AKRALYEVSTLLHQNPRKDK 320
++ALY LL++N +K
Sbjct: 341 NEKALY----LLYENLEAEK 356
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +PS VGCI+G+GG I+E+R+ + A I + A PH + E + I GS+
Sbjct: 285 TQNISIPSDMVGCIIGRGGTKISEIRKTSNARISIAKA------PHDDTGERMFTITGSA 338
>gi|440907813|gb|ELR57910.1| Poly(rC)-binding protein 1 [Bos grunniens mutus]
Length = 356
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 143/347 (41%), Gaps = 72/347 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 161
Query: 308 VSTLLHQN------------PRKDKPPSSFPQAYGGQNFHSPPA--PMADMHPLGNSSWP 353
+ ++ + P + P SS GGQ+ S A P A H L P
Sbjct: 162 ICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT-HDL--EGPP 218
Query: 354 ARNSSLHGMPS-TPWMGGYGDQPSR-----------MGSGSINSCPPGQMG-----EVSA 396
S+ G + +P +Q +R G I+S P G + S
Sbjct: 219 LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDAST 278
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ + ++ IG +IG+ G N+ +++Q +GA I + + S R
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGSNINEIRQMSGAQIKIANPVEGSSGR 325
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTERAITIAG 150
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 281 THELTIPNNLIGCIIGRQGSNINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSA 333
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 334 ASISLAQYLINARLSSEKGM 353
>gi|410227970|gb|JAA11204.1| poly(rC) binding protein 1 [Pan troglodytes]
Length = 356
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 143/347 (41%), Gaps = 72/347 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 161
Query: 308 VSTLLHQN------------PRKDKPPSSFPQAYGGQNFHSPPA--PMADMHPLGNSSWP 353
+ ++ + P + P SS GGQ+ S A P A H L P
Sbjct: 162 ICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT-HDL--EGPP 218
Query: 354 ARNSSLHGMPS-TPWMGGYGDQPSR-----------MGSGSINSCPPGQMG-----EVSA 396
S+ G + +P +Q +R G I+S P G + S
Sbjct: 219 LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWAGLDAST 278
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ + ++ IG +IG+ G N+ +++Q +GA I + + S R
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGR 325
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTERAITIAG 150
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSA 333
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 334 ASISLAQYLINARLSSEKGM 353
>gi|332864859|ref|XP_001157309.2| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
isoform 1 [Pan troglodytes]
Length = 440
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 39/291 (13%)
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
+ D I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 128 SKDQARHTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 185
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 186 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 235
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ + A +
Sbjct: 236 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSV 278
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 279 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 333
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 334 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 384
>gi|67523265|ref|XP_659693.1| hypothetical protein AN2089.2 [Aspergillus nidulans FGSC A4]
gi|40745765|gb|EAA64921.1| hypothetical protein AN2089.2 [Aspergillus nidulans FGSC A4]
Length = 745
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 93/391 (23%), Positives = 155/391 (39%), Gaps = 91/391 (23%)
Query: 105 GIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA 164
G GN S R Q N R + S++ VIGK G V +R + AK TV+
Sbjct: 89 GEAAGNQSEQQRPQDESNW----IHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVS 144
Query: 165 DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED 224
D G+ ER++ + S P QDA+ K II
Sbjct: 145 DYSRGAVERILTV-SGP----------------------------QDAVAKAFGLIIRTL 175
Query: 225 LFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPC 284
+ + ++ T RLL+P+ ++G ++GK G I+ ++ +GA R+ +D P
Sbjct: 176 NNEPLDAASTAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQDASGA--RLNASDACLP- 232
Query: 285 AMNTDEMVQISGKPNVAKRALYEVS-TLLHQNPRKDKPPSS------------------- 324
++T+ + I G + A Y V+ TL+ Q + P++
Sbjct: 233 -LSTERSLVILGVADAVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQ 291
Query: 325 ----FPQAYGGQNFHSPPAPMADMHP----LGNSSW------------PARNSSLH-GMP 363
PQ GGQ H P HP G ++ P +H G P
Sbjct: 292 VVPYVPQPAGGQYGH--PDTFKRHHPGQARAGAGAYGVPYLHGQHAPAPVAPQPMHYGAP 349
Query: 364 STPWMGGYGDQPSRMGS--------GSINSCPPGQMGEVSAE-FSMKILCSAGKIGGVIG 414
TP+ G QP+ G+ G + P G G + + + +I +G +IG
Sbjct: 350 QTPYAGAGPHQPTPYGAPQAAQPRGGPTPAAPVG--GAMPGQPLTQQIYIPNDMVGAIIG 407
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
KGG + +++ +G+ I + + +S+ER++
Sbjct: 408 KGGAKINEIRHLSGSVIKINEPQENSNERLV 438
Score = 49.7 bits (117), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 14/129 (10%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
++ + S+ + VIGKGG NV Q+++ +GA V D + ER++ S G + ++
Sbjct: 110 IRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVS---GPQDAVAK 166
Query: 460 TIDAILQLQNK----TSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
I++ N + ++ T RLL+P +G I+G+GG I E++ +
Sbjct: 167 AFGLIIRTLNNEPLDAASTAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQDAS------ 220
Query: 516 VGARVKLQD 524
GAR+ D
Sbjct: 221 -GARLNASD 228
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 47/86 (54%), Gaps = 14/86 (16%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+T ++ +P+ VG I+G+GG INE+R + G+ +K+ +P S+E +V I G+
Sbjct: 391 LTQQIYIPNDMVGAIIGKGGAKINEIR-------HLSGSVIKINEPQENSNERLVTITGT 443
Query: 540 SE-------HLISAHGTYQSFMTSGQ 558
E L S TY++ +SGQ
Sbjct: 444 QECNQMALYMLYSRLDTYRAAHSSGQ 469
>gi|3548819|gb|AAC34491.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 155
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 72/126 (57%), Gaps = 16/126 (12%)
Query: 163 VADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIE 222
V + +PG +ERV+ IYS+ + + ++ ++D C A DAL KVHD ++
Sbjct: 3 VNEALPGCDERVVTIYSNSEERNRIEDDNEDFV-----------CPAFDALFKVHDMVVV 51
Query: 223 EDLFGGMASDDDNENS----TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA 278
E+ +D++E S +T R+LVP++ +G L+GK G +IQ LR++T A IRV
Sbjct: 52 EEFDDDDDYNDNDEYSEGQTVVTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV-RN 110
Query: 279 DRLPPC 284
D LP C
Sbjct: 111 DNLPMC 116
Score = 42.7 bits (99), Expect = 0.66, Method: Composition-based stats.
Identities = 17/36 (47%), Positives = 26/36 (72%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+T R+LVPS ++G ++G+GG +I +R T A IRV
Sbjct: 73 VTVRMLVPSDQIGYLIGKGGPIIQTLRNDTNAQIRV 108
>gi|410951299|ref|XP_003982335.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Felis catus]
Length = 403
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 135/321 (42%), Gaps = 60/321 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL-----HGMP 363
++ ++P K P G S + G + PA + L H +P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYG-AVTPAEVTKLQQLSGHAVP 225
Query: 364 -STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
++P M + PG + S + L IG VIG+ G + +
Sbjct: 226 FASPSM--------------VPGLDPG-----TQTSSQEFLVPNDLIGCVIGRQGSKISE 266
Query: 423 LQQETGASIHVEDAPTDSDER 443
++Q +GA I + + + ER
Sbjct: 267 IRQMSGAHIKIGNQAEGAGER 287
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 95 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGG------- 228
P I + E+ + P + LL + + +G
Sbjct: 155 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVT 214
Query: 229 ----------------MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
M D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 215 KLQQLSGHAVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 274
Query: 273 IRV 275
I++
Sbjct: 275 IKI 277
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|335299138|ref|XP_003358505.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Sus scrofa]
Length = 403
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 135/321 (42%), Gaps = 60/321 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL-----HGMP 363
++ ++P K P G S + G + PA + L H +P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYG-AVTPAEVTKLQQLSGHAVP 225
Query: 364 -STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
++P M + PG + S + L IG VIG+ G + +
Sbjct: 226 FASPSM--------------VPGLDPG-----TQTSSQEFLVPNDLIGCVIGRQGSKISE 266
Query: 423 LQQETGASIHVEDAPTDSDER 443
++Q +GA I + + + ER
Sbjct: 267 IRQMSGAHIKIGNQAEGAGER 287
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 95 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGG------- 228
P I + E+ + P + LL + + +G
Sbjct: 155 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVT 214
Query: 229 ----------------MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
M D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 215 KLQQLSGHAVPFASPSMVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 274
Query: 273 IRV 275
I++
Sbjct: 275 IKI 277
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|73985377|ref|XP_849987.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Canis lupus
familiaris]
gi|301767222|ref|XP_002919000.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
Length = 403
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 135/321 (42%), Gaps = 60/321 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL-----HGMP 363
++ ++P K P G S + G + PA + L H +P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYG-AVTPAEVTKLQQLSGHAVP 225
Query: 364 -STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
++P M + PG + S + L IG VIG+ G + +
Sbjct: 226 FASPSM--------------VPGLDPG-----AQTSSQEFLVPNDLIGCVIGRQGSKISE 266
Query: 423 LQQETGASIHVEDAPTDSDER 443
++Q +GA I + + + ER
Sbjct: 267 IRQMSGAHIKIGNQAEGAGER 287
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 95 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGG------- 228
P I + E+ + P + LL + + +G
Sbjct: 155 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVT 214
Query: 229 ----------------MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
M D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 215 KLQQLSGHAVPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 274
Query: 273 IRV 275
I++
Sbjct: 275 IKI 277
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|30680512|ref|NP_850764.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
gi|332003360|gb|AED90743.1| binding to TOMV RNA 1L (long form) protein [Arabidopsis thaliana]
Length = 334
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 134/331 (40%), Gaps = 74/331 (22%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEER 173
+ S +S T R L + G VIGK G+ + + ++ A+I ++ + PG+ +R
Sbjct: 24 DSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDR 83
Query: 174 VIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD 233
+I+I S ++ + L + D++ E + ++D
Sbjct: 84 IIMISGSIKEVV-------------------------NGLELILDKLHSE-----LHAED 113
Query: 234 DNE-NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
NE RL+VPN+ G ++GK G I+ E+ A I++ P D +D +V
Sbjct: 114 GNEVEPRRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGL--SDRLV 171
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGG---QNFHSPPAPMADMHPLGN 349
+SG RA+ + L ++ + S P +Y G FH PP A
Sbjct: 172 TLSGTFEEQMRAIDLILAKLTEDDHYSQNVHS-PYSYAGLFYSGFHGPPYAYA------- 223
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEV-----SAEFSMKILC 404
+PS + G S+N P G G+ A ++ I
Sbjct: 224 ------------LPSV----------ATAGYNSVNYAPNGSGGKYQNHKEEASTTVTIGV 261
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
+ IG V+G+GG N+ ++ Q TGA I + D
Sbjct: 262 ADEHIGLVLGRGGRNIMEITQMTGARIKISD 292
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV----EDAPTDSDERVIRASAFEGLWN 455
++ L S G VIGKGG + + Q ++GA I + E P +D ++ + + + + N
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVVN 96
Query: 456 PRSQTIDAI---LQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+D + L ++ +E + I RL+VP+S G I+G+GG I ++A
Sbjct: 97 GLELILDKLHSELHAEDG-NEVEPRRRI--RLVVPNSSCGGIIGKGGATIKSFIEESKAG 153
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
I++ L + G S+ +V + G+ E + A
Sbjct: 154 IKI----SPLDNTFYGLSDRLVTLSGTFEEQMRA 183
>gi|417410720|gb|JAA51826.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 440
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 134/321 (41%), Gaps = 60/321 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 57 LRMLMQGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 110
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ +T RL++P
Sbjct: 111 -----------------HAVSMIAFK------LDEDLCSAPANGGTVSRPPVTLRLVIPA 147
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 148 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 203
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL-----HGMP 363
++ ++P K P G S + G + PA + L H +P
Sbjct: 204 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVT-PAEVTKLQQLSGHAVP 262
Query: 364 -STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
++P M + PG + S + L IG VIG+ G + +
Sbjct: 263 FASPSM--------------VPGLDPG-----AQTSSQEFLVPNDLIGCVIGRQGSKISE 303
Query: 423 LQQETGASIHVEDAPTDSDER 443
++Q +GA I + + + ER
Sbjct: 304 IRQMSGAHIKIGNQAEGAGER 324
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 86/178 (48%), Gaps = 34/178 (19%)
Query: 387 PPGQMG----------EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 436
PPG+M E+S ++++L ++G +IGK G VK++++++ A I + +
Sbjct: 34 PPGRMSSSDAGLEEEPELSVTLTLRMLMQGKEVGSIIGKKGETVKRIREQSSARITISEG 93
Query: 437 PTDSDERVIR-----ASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI-----TTRLLV 486
ER+ A+ F + ++ A ++ S + GT+ T RL++
Sbjct: 94 --SCPERITTITGSTAAVFHAV------SMIAFKLDEDLCSAPANGGTVSRPPVTLRLVI 145
Query: 487 PSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
P+S+ G ++G+ G I E+R T A ++V G D P S+E V + G + +I
Sbjct: 146 PASQCGSLIGKAGTKIKEIRETTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 197
>gi|260949329|ref|XP_002618961.1| hypothetical protein CLUG_00120 [Clavispora lusitaniae ATCC 42720]
gi|238846533|gb|EEQ35997.1| hypothetical protein CLUG_00120 [Clavispora lusitaniae ATCC 42720]
Length = 488
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 91/408 (22%), Positives = 165/408 (40%), Gaps = 105/408 (25%)
Query: 118 QSFGNSQP---------ADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI 167
++ G+S+P A TV R+ CP ++ V+GK G + +RE+ +I V++ +
Sbjct: 94 EAIGSSKPISSHKKDDDASTVSVRMYCPVKEAAAVVGKKGEKITHIREKANVRIYVSENL 153
Query: 168 PGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
ERVI + S +A+ A + I+EE
Sbjct: 154 KNVPERVISVKGSAEDVAR-------------------------AFGLITRAILEEP--- 185
Query: 228 GMASDDDNENSTITAR-----LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
++E ++IT++ LLVP+ MVG ++GK G + + + A ++ A++
Sbjct: 186 ------EDEPASITSKQYNLKLLVPHPMVGYIIGKSGSKFREIEENSAAKLKA--AEQAL 237
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVST-------------LLHQNPRKDKPP------- 322
P + TD ++ ++G + A+Y + + +++ NP +P
Sbjct: 238 PYS--TDRVLSVTGVGDAIHIAVYYICSVMLAHRDCLKKHKIIYYNPSNFRPQLPAANPI 295
Query: 323 ---SSFPQAYGGQNFHSPPAPMADMHPLGNSS-------------------WPARNSSLH 360
S PQ P M M P N P+ +
Sbjct: 296 MNMSIAPQQNAVPYMTGNPMQMQQMGPGPNLKDAHGSYSQVPKPYNFQMMFQPSARPQFN 355
Query: 361 G---MPSTPWMGG----YGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVI 413
G MP+T G + D+ G + + P Q+ +FS + + IG VI
Sbjct: 356 GPSNMPNTQIQIGAQNSFTDEHGNTIIGDVITQMPVQISSSPDKFSEDVFVANSNIGSVI 415
Query: 414 GKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTI 461
GKGG N+KQ+++ +G + +V+ P D ++ ++ +GL N R T+
Sbjct: 416 GKGGNNIKQIRESSGCT-YVKIEP-DQNQSILLGGG-KGLTNIRKLTL 460
Score = 40.0 bits (92), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 28/122 (22%), Positives = 58/122 (47%), Gaps = 3/122 (2%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGL 453
++ S+++ C + V+GK G + ++++ I+V + + ERVI + E +
Sbjct: 111 ASTVSVRMYCPVKEAAAVVGKKGEKITHIREKANVRIYVSENLKNVPERVISVKGSAEDV 170
Query: 454 WNPRSQTIDAILQL-QNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
AIL+ +++ + + K +LLVP VG I+G+ G E+ + A
Sbjct: 171 ARAFGLITRAILEEPEDEPASITSK-QYNLKLLVPHPMVGYIIGKSGSKFREIEENSAAK 229
Query: 513 IR 514
++
Sbjct: 230 LK 231
>gi|402590061|gb|EJW83992.1| hypothetical protein WUBG_05097, partial [Wuchereria bancrofti]
Length = 210
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 76/139 (54%), Gaps = 11/139 (7%)
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQ- 466
++G +IGK G ++K ++ ++GA I++ D ER++ + G N I A LQ
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDG--SCPERIVTITGSIGTINKAFGMICAKLQQ 58
Query: 467 -LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDP 525
LQ + K IT RL+VP+++ GCI+G+GG I E+R T A I+V +
Sbjct: 59 DLQALPNSI-PKPPITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQVASEML----- 112
Query: 526 HPGSSECIVDIRGSSEHLI 544
P S+E V I GS++ ++
Sbjct: 113 -PSSTERAVTISGSADSIV 130
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/181 (27%), Positives = 84/181 (46%), Gaps = 35/181 (19%)
Query: 138 KIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAE 197
++G +IGK G+ +K +R+++ AKI ++D ER++ I S I K
Sbjct: 1 EVGSIIGKRGDHIKLIRDQSGAKINISDG--SCPERIVTITGSIGTINK----------- 47
Query: 198 TKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGK 257
+ CA +++DL A + IT RL+VP GC++GK
Sbjct: 48 ----AFGMICAK-----------LQQDL---QALPNSIPKPPITMRLIVPATQCGCIIGK 89
Query: 258 RGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPR 317
G I+ +R TGA+I+V ++ LP +T+ V ISG + + + +L + P
Sbjct: 90 GGTKIKEIREATGASIQV-ASEMLPS---STERAVTISGSADSIVDCMRNICQILLEAPP 145
Query: 318 K 318
K
Sbjct: 146 K 146
Score = 42.4 bits (98), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 118 QSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVI 175
Q+ NS P + R++ P+ + G +IGK G +K +RE T A I VA + +P S ER +
Sbjct: 61 QALPNSIPKPPITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQVASEMLPSSTERAV 120
Query: 176 IIYSSPTKIA 185
I S I
Sbjct: 121 TISGSADSIV 130
Score = 38.9 bits (89), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 34/54 (62%), Gaps = 3/54 (5%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV--EDAPTDSDERVIRASA 449
+M+++ A + G +IGKGG +K++++ TGASI V E P+ S ER + S
Sbjct: 72 ITMRLIVPATQCGCIIGKGGTKIKEIREATGASIQVASEMLPS-STERAVTISG 124
>gi|154275678|ref|XP_001538690.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150415130|gb|EDN10492.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|225556762|gb|EEH05050.1| KH domain RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 363
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 138/313 (44%), Gaps = 40/313 (12%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ + G +RV+ + AK
Sbjct: 47 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKA--- 103
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ LL+ ++ GG+AS+ N T RLL+ +N
Sbjct: 104 ---------------YAIVAKGLLEGAPQL----GMGGVASN----NGTHPVRLLISHNQ 140
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 141 MGTIIGRQGLKIKYIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAVWEIGK 196
Query: 311 LLHQNPRKDKPPSSFPQAY----GGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTP 366
L + ++ + A GG ++ A G S+ N + +G +
Sbjct: 197 CLIDDWQRGTGTVLYNPAVRASVGGGPLNNSLGSGASTGGYGGRSY---NRTGNGADFSD 253
Query: 367 WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQE 426
GGY R S + + P + + I + +G +IG+GG + ++++
Sbjct: 254 QTGGYN---RRSNSDAASRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRS 310
Query: 427 TGASIHVEDAPTD 439
+GA I + AP D
Sbjct: 311 SGARISIAKAPHD 323
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 283 TQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKA----PHDETGERMFTIMGSAAA 338
Query: 301 AKRALYEVSTLLHQNPRKDK 320
++ALY LL++N +K
Sbjct: 339 NEKALY----LLYENLEAEK 354
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNP 456
+++ + S+ + G +IGK G NV L+ ETG V +RV+ + +G
Sbjct: 44 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKA 103
Query: 457 RSQTIDAILQLQ---NKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ +L+ S GT RLL+ +++G I+G+ G I + + + +
Sbjct: 104 YAIVAKGLLEGAPQLGMGGVASNNGTHPVRLLISHNQMGTIIGRQGLKIKYI--QDASGV 161
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
R+V + L P S+E IV+++G+ E + A
Sbjct: 162 RMVAQKEML----PQSTERIVEVQGTPEGIEKA 190
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +PS VGCI+G+GG I+E+RR + A I + A PH + E + I GS+
Sbjct: 283 TQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKA------PHDETGERMFTIMGSA 336
>gi|296225349|ref|XP_002758447.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Callithrix
jacchus]
gi|296225353|ref|XP_002758449.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Callithrix
jacchus]
gi|297671175|ref|XP_002813714.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Pongo abelii]
gi|297671177|ref|XP_002813715.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Pongo abelii]
gi|395733705|ref|XP_003776278.1| PREDICTED: poly(rC)-binding protein 4 [Pongo abelii]
Length = 403
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 135/321 (42%), Gaps = 60/321 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL-----HGMP 363
++ ++P K P G S + G + PA + L H +P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYG-AVTPAEVTKLQQLSSHAVP 225
Query: 364 -STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+TP + + PG + S + L IG VIG+ G + +
Sbjct: 226 FATPSV--------------VPGLDPG-----TQTSSQEFLVPNDLIGCVIGRQGSKISE 266
Query: 423 LQQETGASIHVEDAPTDSDER 443
++Q +GA I + + + ER
Sbjct: 267 IRQMSGAHIKIGNQAEGAGER 287
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 95 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGGMASDD-- 233
P I + E+ + P + LL + + +G + +
Sbjct: 155 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVT 214
Query: 234 ---------------------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 215 KLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 274
Query: 273 IRV 275
I++
Sbjct: 275 IKI 277
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|417399455|gb|JAA46731.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 351
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 49/220 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKDKP----------PSSFPQAY-GGQNFHS 336
+ ++ + + P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYS 201
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 100/247 (40%), Gaps = 68/247 (27%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIY----------------------------------- 178
E T A++ VA D +P S ER I I
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 179 ---SSPTKIAKTQNK---DDDSAA---ETKKESMEP---------------HCAAQDALL 214
SSP A Q++ DSA+ T + P + Q L
Sbjct: 185 KPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLT 244
Query: 215 KVHDRIIEEDLF------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSE 268
K+H +++ F G ++ D T T L +PNN++GC++G++G I +R
Sbjct: 245 KLHQLAMQQSHFPMTHGNTGFSASLDASTQT-THELTIPNNLIGCIIGRQGANINEIRQM 303
Query: 269 TGANIRV 275
+GA I++
Sbjct: 304 SGAQIKI 310
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 276 THELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSA 328
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 329 ASISLAQYLINARLSSEKGM 348
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|14670369|ref|NP_127501.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|14670373|ref|NP_127503.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|291575148|ref|NP_001167571.1| poly(rC)-binding protein 4 isoform c [Homo sapiens]
gi|114587184|ref|XP_001170982.1| PREDICTED: poly(rC)-binding protein 4 isoform 12 [Pan troglodytes]
gi|114587188|ref|XP_001171026.1| PREDICTED: poly(rC)-binding protein 4 isoform 14 [Pan troglodytes]
gi|410037040|ref|XP_003950173.1| PREDICTED: poly(rC)-binding protein 4 [Pan troglodytes]
gi|12230429|sp|P57723.1|PCBP4_HUMAN RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957167|gb|AAG09241.1|AF176330_1 alphaCP-4 [Homo sapiens]
gi|10436225|dbj|BAB14761.1| unnamed protein product [Homo sapiens]
gi|12804299|gb|AAH03008.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|13278756|gb|AAH04153.1| Poly(rC) binding protein 4 [Homo sapiens]
gi|119585571|gb|EAW65167.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585572|gb|EAW65168.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585573|gb|EAW65169.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585576|gb|EAW65172.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|119585577|gb|EAW65173.1| poly(rC) binding protein 4, isoform CRA_c [Homo sapiens]
gi|261861404|dbj|BAI47224.1| poly(rC) binding protein 4 [synthetic construct]
gi|410227440|gb|JAA10939.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227442|gb|JAA10940.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410227444|gb|JAA10941.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262892|gb|JAA19412.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262894|gb|JAA19413.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410262896|gb|JAA19414.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301312|gb|JAA29256.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410301314|gb|JAA29257.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350315|gb|JAA41761.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350319|gb|JAA41763.1| poly(rC) binding protein 4 [Pan troglodytes]
gi|410350321|gb|JAA41764.1| poly(rC) binding protein 4 [Pan troglodytes]
Length = 403
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 135/321 (42%), Gaps = 60/321 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL-----HGMP 363
++ ++P K P G S + G + PA + L H +P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYG-AVTPAEVTKLQQLSSHAVP 225
Query: 364 -STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+TP + + PG + S + L IG VIG+ G + +
Sbjct: 226 FATPSV--------------VPGLDPG-----TQTSSQEFLVPNDLIGCVIGRQGSKISE 266
Query: 423 LQQETGASIHVEDAPTDSDER 443
++Q +GA I + + + ER
Sbjct: 267 IRQMSGAHIKIGNQAEGAGER 287
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 95 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGGMASDD-- 233
P I + E+ + P + LL + + +G + +
Sbjct: 155 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVT 214
Query: 234 ---------------------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 215 KLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 274
Query: 273 IRV 275
I++
Sbjct: 275 IKI 277
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|12230430|sp|P57724.1|PCBP4_MOUSE RecName: Full=Poly(rC)-binding protein 4; AltName: Full=Alpha-CP4
gi|9957163|gb|AAG09239.1|AF176328_1 alphaCP-4 [Mus musculus]
Length = 403
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 134/329 (40%), Gaps = 76/329 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGSVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFP------------QAYG--GQNFHSPPAPMADMHPLGNSSWPA 354
++ ++P K P Q + GQ PA + + L + P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPF 226
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
+ S+ P M PS S S EF L IG VIG
Sbjct: 227 ASPSV-----VPGM-----DPSTQTS--------------SQEF----LVPNDLIGCVIG 258
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ G + +++Q +GA I + + + ER
Sbjct: 259 RQGSKISEIRQMSGAHIKIGNQAEGAGER 287
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|156388117|ref|XP_001634548.1| predicted protein [Nematostella vectensis]
gi|156221632|gb|EDO42485.1| predicted protein [Nematostella vectensis]
Length = 338
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/160 (31%), Positives = 81/160 (50%), Gaps = 29/160 (18%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S+ +K++ IG +IGK G +KQ +QE+ A I++ D T ER++ +
Sbjct: 24 SSNLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDGST--PERIVSVTG----- 76
Query: 455 NPRSQTIDAIL--------QLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVIN 503
T DA++ +L+++ S+ T +T RL+VP S+ G I+G+GG I
Sbjct: 77 -----TKDAVVTAFALIGQKLEDELKSNSKSNTTPPVTLRLIVPGSQCGSIIGKGGAKIK 131
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
E+R + A + V G + PGSSE V + G+ E L
Sbjct: 132 EIREVSGASVVVAGEFL------PGSSERAVTLSGTPEAL 165
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/361 (22%), Positives = 148/361 (40%), Gaps = 58/361 (16%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
G ++ V +++ + IG +IGK G+ +K R+E+ A I ++D S+
Sbjct: 20 GRGHSSNLVLKMIMQGKDIGSIIGKEGSTIKQFRQESNAHINISDG------------ST 67
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P +I D A A + ++ E++L ++ N +
Sbjct: 68 PERIVSVTGTKD---------------AVVTAFALIGQKL-EDEL---KSNSKSNTTPPV 108
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T RL+VP + G ++GK G I+ +R +GA++ V+ + LP +++ V +SG P
Sbjct: 109 TLRLIVPGSQCGSIIGKGGAKIKEIREVSGASV-VVAGEFLPG---SSERAVTLSGTPEA 164
Query: 301 AKRALYEVSTLLHQNPRKDKP----PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN 356
+ + + ++ + P + P P Q +G F+ PP +P
Sbjct: 165 LETCIDLLCGVMIEFPPRGHPMPYTPHKLQQQFG---FYGPPQGFG---------YPGPY 212
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
H P+ G+ G G PP +M IL G +G +IG+
Sbjct: 213 GMPHAFPN-----GFMAGRGPYGGGRKGKGPPPPQPGPITSHTMTIL--KGAVGSIIGQK 265
Query: 417 GFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSE 476
G + ++Q +GASI + D+ D+R + + I+A L+ K+ ++
Sbjct: 266 GSYITGIRQMSGASIKIGDSENGDDKREVLITGTAEAVGLAQFLINARLRQDGKSPVVTD 325
Query: 477 K 477
K
Sbjct: 326 K 326
>gi|41053065|dbj|BAD08009.1| putative KH domain protein [Oryza sativa Japonica Group]
Length = 458
Score = 68.2 bits (165), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/197 (28%), Positives = 97/197 (49%), Gaps = 16/197 (8%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P +V+R++ + K+GG+IG+ G+ +K L E+T+A++ V + + I+ S I
Sbjct: 94 PGASVFRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVDSDSNDFI 153
Query: 185 AK-TQNKDDDSAAETKKESMEPHCAAQDALLKV--HDRIIE----EDLFGGMASDDDNEN 237
AK T SA E + + P A DA +K+ H IE +D G A +
Sbjct: 154 AKVTFEMVLISATEESQAELPP---AMDAAIKIFMHINDIEKINCDDTLSGSAPE----- 205
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
+A+LLVP+ L+GK+G I+ ++ TGA ++++ L + + +V I G
Sbjct: 206 -KCSAKLLVPSAQATHLIGKQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGA 264
Query: 298 PNVAKRALYEVSTLLHQ 314
P AL V +L +
Sbjct: 265 PLKVLHALKSVLGVLRK 281
Score = 39.3 bits (90), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 86/188 (45%), Gaps = 34/188 (18%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP--------TDSDE--------- 442
+++ + K+GG+IG+ G +K+L ++T A + V +A DSD
Sbjct: 99 FRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVDSDSNDFIAKVTF 158
Query: 443 RVIRASAFEGLWNPRSQTIDAILQL---QNKTSEFSEKGTI--------TTRLLVPSSKV 491
++ SA E +DA +++ N + + T+ + +LLVPS++
Sbjct: 159 EMVLISATEESQAELPPAMDAAIKIFMHINDIEKINCDDTLSGSAPEKCSAKLLVPSAQA 218
Query: 492 GCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI----SAH 547
++G+ G I ++ T A ++++ +V+L + E IVDI G+ ++ S
Sbjct: 219 THLIGKQGVRIKSIQETTGATVKIID-KVELLS-YDVVDERIVDIHGAPLKVLHALKSVL 276
Query: 548 GTYQSFMT 555
G + F+
Sbjct: 277 GVLRKFLV 284
>gi|47209955|emb|CAF90944.1| unnamed protein product [Tetraodon nigroviridis]
Length = 164
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 86/182 (47%), Gaps = 32/182 (17%)
Query: 137 RKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAA 196
+++G +IGK G VK +REE+ A+I +++ S ER++ I + I +T
Sbjct: 6 QEVGSIIGKKGETVKKIREESGARINISEG--SSPERIVTITGATEAIFRT--------- 54
Query: 197 ETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLG 256
+ + EED+ M++ + +T RL+ P + G L+G
Sbjct: 55 -----------------FAMIAQKFEEDINAAMSNSNVTSKPPVTLRLVFPGSQCGSLIG 97
Query: 257 KRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNP 316
K G I+ +R TGA ++V D LP +T+ V ISG P + + + +++ ++P
Sbjct: 98 KGGSKIKEIRETTGAQVQV-AGDMLPD---STERAVTISGTPQAITQCVRHICSVMLESP 153
Query: 317 RK 318
K
Sbjct: 154 PK 155
Score = 62.0 bits (149), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 75/144 (52%), Gaps = 20/144 (13%)
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA--------FEGLWNPRSQ 459
++G +IGK G VK++++E+GA I++ + S ER++ + F + +
Sbjct: 7 EVGSIIGKKGETVKKIREESGARINISEG--SSPERIVTITGATEAIFRTFAMIAQKFEE 64
Query: 460 TIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGAR 519
I+A + N TS K +T RL+ P S+ G ++G+GG I E+R T A ++V G
Sbjct: 65 DINAAMSNSNVTS----KPPVTLRLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAG-- 118
Query: 520 VKLQDPHPGSSECIVDIRGSSEHL 543
D P S+E V I G+ + +
Sbjct: 119 ----DMLPDSTERAVTISGTPQAI 138
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSE 171
N++ S S+P T+ R++ P + G +IGK G+ +K +RE T A++ VA D +P S
Sbjct: 67 NAAMSNSNVTSKPPVTL-RLVFPGSQCGSLIGKGGSKIKEIRETTGAQVQVAGDMLPDST 125
Query: 172 ERVIIIYSSPTKIAK 186
ER + I +P I +
Sbjct: 126 ERAVTISGTPQAITQ 140
>gi|195440454|ref|XP_002068057.1| GK10610 [Drosophila willistoni]
gi|194164142|gb|EDW79043.1| GK10610 [Drosophila willistoni]
Length = 363
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/341 (24%), Positives = 154/341 (45%), Gaps = 56/341 (16%)
Query: 110 NWSNSSREQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
N S+S+ + P+ T+ R++ +++G +IGK G IV REE+ AKI ++D
Sbjct: 5 NTSSSAGGAPIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--- 61
Query: 169 GS-EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
GS ER++ + + + I SA + E C+ + + KV
Sbjct: 62 GSCPERIVTVSGTTSAIF--------SAFTLITKKFEEWCSQFNDVGKVGK--------- 104
Query: 228 GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMN 287
+ I RL+VP + G L+GK G I+ +R TG +I+V ++ LP +
Sbjct: 105 ----------TQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV-ASEMLPN---S 150
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK--PPSSFPQAYGGQNFHSPPAPMADMH 345
T+ V +SG + +Y++ ++ ++P + P PQ G P +A+
Sbjct: 151 TERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTG-------PVILANGQ 203
Query: 346 PL---GNSSWPARNSSLHGMPSTPWMGGYGDQPSRMG----SGSINSCPPGQMGEVSAEF 398
GN + P + + + + S +G G P+ G + ++ + Q+ +A
Sbjct: 204 AFTIQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRTANANR 263
Query: 399 SMK----ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
+ + + S IG +IGKGG + +++Q +GA I + +
Sbjct: 264 AQQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 304
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 76/154 (49%), Gaps = 15/154 (9%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G V + ++E+GA I++ D ER++ S
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVSGTTSAI 78
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGT-----ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
I + + S+F++ G I RL+VP+S+ G ++G+ G I E+R+ T
Sbjct: 79 FSAFTLITK--KFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTT 136
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
I+V + P S+E V + GS+E +
Sbjct: 137 GCSIQVASEML------PNSTERAVTLSGSAEQI 164
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
+ V N+++GC++GK G I +R +GA IR+ + NTD + ISG P+
Sbjct: 270 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERE--GGNTDRTITISGNPDSVA 327
Query: 303 RALYEVS 309
A Y ++
Sbjct: 328 LAQYLIN 334
>gi|61557337|ref|NP_001013241.1| poly(rC)-binding protein 2 [Rattus norvegicus]
gi|193083108|ref|NP_001122383.1| poly(rC)-binding protein 2 isoform d [Homo sapiens]
gi|6707736|sp|Q15366.1|PCBP2_HUMAN RecName: Full=Poly(rC)-binding protein 2; AltName: Full=Alpha-CP2;
AltName: Full=Heterogeneous nuclear ribonucleoprotein
E2; Short=hnRNP E2
gi|460773|emb|CAA55015.1| hnRNP-E2 [Homo sapiens]
gi|50926841|gb|AAH78906.1| Poly(rC) binding protein 2 [Rattus norvegicus]
gi|119617116|gb|EAW96710.1| poly(rC) binding protein 2, isoform CRA_e [Homo sapiens]
Length = 365
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 49/220 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKDKP----------PSSFPQAY-GGQNFHS 336
+ ++ + + P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYS 201
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 287 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 339
Query: 539 SSEHL 543
S+ +
Sbjct: 340 SAASI 344
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|347300276|ref|NP_001231441.1| poly(rC) binding protein 2 [Sus scrofa]
gi|417399505|gb|JAA46755.1| Putative polyc-binding alphacp-1 [Desmodus rotundus]
Length = 353
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 49/220 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKDKP----------PSSFPQAY-GGQNFHS 336
+ ++ + + P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYS 201
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/284 (24%), Positives = 113/284 (39%), Gaps = 72/284 (25%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 124
Query: 155 EETQAKITVA-DTIPGSEERVIIIY----------------------------------- 178
E T A++ VA D +P S ER I I
Sbjct: 125 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 184
Query: 179 ---SSPTKIAKTQNK---DDDSAA---ETKKESMEP---------------HCAAQDALL 214
SSP A Q++ DSA+ T + P + Q L
Sbjct: 185 KPSSSPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLT 244
Query: 215 KVHDRIIEEDLF------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSE 268
K+H +++ F G ++ D T + L +PN+++GC++G++G I +R
Sbjct: 245 KLHQLAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQM 304
Query: 269 TGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+GA I++ P +TD V I+G A Y ++ L
Sbjct: 305 SGAQIKI-----ANPVEGSTDRQVTITGSAASISLAQYLINVRL 343
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 275 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 327
Query: 539 SSEHL 543
S+ +
Sbjct: 328 SAASI 332
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|386780909|ref|NP_001247796.1| poly(rC)-binding protein 4 [Macaca mulatta]
gi|332216103|ref|XP_003257183.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Nomascus
leucogenys]
gi|332216105|ref|XP_003257184.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Nomascus
leucogenys]
gi|332216107|ref|XP_003257185.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Nomascus
leucogenys]
gi|402859923|ref|XP_003894386.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Papio anubis]
gi|402859925|ref|XP_003894387.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Papio anubis]
gi|402859927|ref|XP_003894388.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Papio anubis]
gi|403291118|ref|XP_003936646.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Saimiri
boliviensis boliviensis]
gi|403291120|ref|XP_003936647.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Saimiri
boliviensis boliviensis]
gi|355559585|gb|EHH16313.1| hypothetical protein EGK_11579 [Macaca mulatta]
gi|355746662|gb|EHH51276.1| hypothetical protein EGM_10621 [Macaca fascicularis]
gi|380788331|gb|AFE66041.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|380788333|gb|AFE66042.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|383414707|gb|AFH30567.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
gi|384943104|gb|AFI35157.1| poly(rC)-binding protein 4 isoform c [Macaca mulatta]
Length = 403
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 135/321 (42%), Gaps = 60/321 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL-----HGMP 363
++ ++P K P G S + G + PA + L H +P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYG-AVTPAEVTKLQQLSSHAVP 225
Query: 364 -STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+TP + + PG + S + L IG VIG+ G + +
Sbjct: 226 FATPSV--------------VPGLDPG-----TQTSSQEFLVPNDLIGCVIGRQGSKISE 266
Query: 423 LQQETGASIHVEDAPTDSDER 443
++Q +GA I + + + ER
Sbjct: 267 IRQMSGAHIKIGNQAEGAGER 287
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 95 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGGMASDD-- 233
P I + E+ + P + LL + + +G + +
Sbjct: 155 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVT 214
Query: 234 ---------------------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 215 KLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 274
Query: 273 IRV 275
I++
Sbjct: 275 IKI 277
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|417410200|gb|JAA51577.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 378
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 20 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 77
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 78 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 135
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 136 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 168
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 49/220 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 29 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 77
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 78 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 117
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 118 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 173
Query: 308 VSTLLHQNPRKDKP----------PSSFPQAY-GGQNFHS 336
+ ++ + + P PSS P + GGQ+ +S
Sbjct: 174 ICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYS 213
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 300 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 352
Query: 539 SSEHL 543
S+ +
Sbjct: 353 SAASI 357
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 37/63 (58%), Gaps = 11/63 (17%)
Query: 213 LLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
LL + +IE GG+ N T+T RLL+ VG ++GK+G+ ++++R E+GA
Sbjct: 10 LLNMDTGVIE----GGL-------NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGAR 58
Query: 273 IRV 275
I +
Sbjct: 59 INI 61
>gi|324505572|gb|ADY42393.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
Length = 415
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 99/385 (25%), Positives = 157/385 (40%), Gaps = 71/385 (18%)
Query: 108 KGNWSNSSREQSFGNSQP---ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA 164
+G ++ R+++ G + R+L PSR G VIGK G +K LR E A +T+
Sbjct: 82 EGGYATGKRQRADGYQEALAAGKYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIP 141
Query: 165 DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED 224
D+ + ER++ I + + + N+ + P D LK D
Sbjct: 142 DS--QTPERIVTIVAEIDNVIRCVNE------------IIPRL---DECLKTRD------ 178
Query: 225 LFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPC 284
+ D+ + RLLV + G ++G+ G I+ LR ET ++V C
Sbjct: 179 -----SDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELREETSTQLKVYSQ----CC 229
Query: 285 AMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRK--DKPPSS------FPQAYGG----Q 332
+T+ ++QI G P + + +L + P K +P S F YGG +
Sbjct: 230 PQSTERVIQIIGVPEKIIACVILIINMLKEIPIKGPSRPYESMFYDPNFVHEYGGFPPDR 289
Query: 333 NFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMG 392
N+ P R P P+ GG G MG G ++ PP G
Sbjct: 290 NYRGMGPRGGMY----GGGLPPR------APRFPY-GGRG-----MGMG-VSPFPPAPFG 332
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG 452
+ I G G +IGKGG + ++++E+GA I VE +S ER+I S
Sbjct: 333 GPMQTTQVTIPNELG--GTIIGKGGERINRIREESGAHIVVEPQQPNS-ERIITISGS-- 387
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEK 477
+ + QT +LQ +TS K
Sbjct: 388 --HAQIQTAQYLLQQCVRTSMAGRK 410
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 12/156 (7%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGL 453
+ ++ +++L + G VIGKGG ++K+L+ E A++ + D+ T ER++ A + +
Sbjct: 102 AGKYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQTP--ERIVTIVAEIDNV 159
Query: 454 WNPRSQTI---DAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
++ I D L+ ++ E S +G RLLV S G I+G+GG+ I E+R T
Sbjct: 160 IRCVNEIIPRLDECLKTRDSDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELREETS 219
Query: 511 ADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
++V P S+E ++ I G E +I+
Sbjct: 220 TQLKV------YSQCCPQSTERVIQIIGVPEKIIAC 249
>gi|67969673|dbj|BAE01185.1| unnamed protein product [Macaca fascicularis]
Length = 324
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 108/251 (43%), Gaps = 42/251 (16%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 47 NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 105
Query: 155 EETQAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETK-------------- 199
E T A++ VA D +P S ER I I P I + + ET
Sbjct: 106 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLETLSQSPPKGVTIPYRP 165
Query: 200 KESMEP--------------HCAAQDALLKVHDRIIEEDLF------GGMASDDDNENST 239
K S P + Q L K+H +++ F G + D + +T
Sbjct: 166 KPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPMTHGNTGFSGLDASAQTT 225
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ L +PN+++GC++G++G I +R +GA I++ P +TD V I+G
Sbjct: 226 -SHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI-----ANPVEGSTDRQVTITGSAA 279
Query: 300 VAKRALYEVST 310
A Y ++
Sbjct: 280 SISLAQYLINV 290
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/331 (23%), Positives = 134/331 (40%), Gaps = 88/331 (26%)
Query: 137 RKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAA 196
+++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 4 KEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------------- 46
Query: 197 ETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
+A+ K II EED+ M + +T RL+VP + G
Sbjct: 47 --------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVPASQCGS 92
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
L+GK G I+ +R TGA ++V D LP +T+ + I+G P + ++ ++
Sbjct: 93 LIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQICVVML 148
Query: 314 QNPRKDKP----------PSSFP------QAYGGQNFHSPPAP-MADMHPLG--NSSWPA 354
+ + P PSS P QAY Q ++ P P + +H L S +P
Sbjct: 149 ETLSQSPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYAIPQPDLTKLHQLAMQQSHFPM 208
Query: 355 R--NSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGV 412
N+ G+ ++ + S ++ IG +
Sbjct: 209 THGNTGFSGLDAS-----------------------------AQTTSHELTIPNDLIGCI 239
Query: 413 IGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
IG+ G + +++Q +GA I + + S +R
Sbjct: 240 IGRQGAKINEIRQMSGAQIKIANPVEGSTDR 270
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 109/227 (48%), Gaps = 25/227 (11%)
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAFEGLWNPRSQTIDAILQ 466
++G +IGK G +VK++++E+GA I++ + + ER+I A ++ + ID + +
Sbjct: 5 EVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKAFAMIIDKLEE 62
Query: 467 -----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVK 521
+ N T+ + + +T RL+VP+S+ G ++G+GG I E+R T A ++V G
Sbjct: 63 DISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG---- 116
Query: 522 LQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQNI--NPQQSSCQT 579
D P S+E + I G + +I Q + +++ P I P+ SS
Sbjct: 117 --DMLPNSTERAITIAGIPQSIIEC--VKQICVVMLETLSQSPPKGVTIPYRPKPSSSPV 172
Query: 580 MSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSSYPMHTHQGAG 626
+ + +Y T Q Y + + QQS +PM TH G
Sbjct: 173 IFAGGQAY----TIQGQYAIPQPDLTKLHQLAMQQSHFPM-THGNTG 214
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 224 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 276
Query: 539 SSEHL 543
S+ +
Sbjct: 277 SAASI 281
>gi|354476373|ref|XP_003500399.1| PREDICTED: poly(rC)-binding protein 4 [Cricetulus griseus]
gi|344252773|gb|EGW08877.1| Poly(rC)-binding protein 4 [Cricetulus griseus]
Length = 403
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 135/329 (41%), Gaps = 76/329 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGSVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFP------------QAYG--GQNFHSPPAPMADMHPLGNSSWPA 354
++ ++P K P Q + GQ PA + + L + P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVAPAEVTKLQQLSGHAVPF 226
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
+ S+ +P G PS S S EF L IG VIG
Sbjct: 227 ASPSV--VP--------GLDPSTQTS--------------SQEF----LVPNDLIGCVIG 258
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ G + +++Q +GA I + + + ER
Sbjct: 259 RQGSKISEIRQMSGAHIKIGNQAEGAGER 287
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|14141168|ref|NP_005007.2| poly(rC)-binding protein 2 isoform a [Homo sapiens]
gi|47940610|gb|AAH71942.1| Poly(rC) binding protein 2 [Homo sapiens]
gi|119617115|gb|EAW96709.1| poly(rC) binding protein 2, isoform CRA_d [Homo sapiens]
Length = 366
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 49/220 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKDKP----------PSSFPQAY-GGQNFHS 336
+ ++ + + P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYS 201
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 288 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 340
Query: 539 SSEHL 543
S+ +
Sbjct: 341 SAASI 345
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|332242553|ref|XP_003270449.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Nomascus leucogenys]
Length = 440
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/291 (24%), Positives = 122/291 (41%), Gaps = 39/291 (13%)
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
+ D I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 128 SKDQARHTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 185
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 186 RTITVKGSVETCAKAEEEIMKKIRE---------SYENDIASMNVQTHLIPGLNLNDLG- 235
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ + A +
Sbjct: 236 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSV 278
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 279 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 333
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 334 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 384
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 53/216 (24%), Positives = 95/216 (43%), Gaps = 32/216 (14%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DT 166
N + SS++Q+ + +IL + +G +IGK G +K + ++T KIT++ +
Sbjct: 123 NVTYSSKDQA---RHTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL 179
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL- 225
+ ER I + S +T K ++ + +ES E A+ + + + DL
Sbjct: 180 TLYNPERTITVKGS----VETCAKAEEEIMKKIRESYENDIASMNVQTHLIPGLNLNDLG 235
Query: 226 ----FGGMASDDD-------------NENSTITARLLVPNNMVGCLLGKRGDVIQRLRSE 268
GM ++ T T L +P VG ++GK+G I++L
Sbjct: 236 LFPPTSGMPPPTSGPPSAMTPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRF 295
Query: 269 TGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
GA+I++ PA+ P + MV I+G P +A
Sbjct: 296 AGASIKIAPAE-APDAKVR---MVIITGPPEAQFKA 327
>gi|390355846|ref|XP_003728637.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein K-like [Strongylocentrotus purpuratus]
Length = 345
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 89/164 (54%), Gaps = 21/164 (12%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG 452
E+ + + ++L S+ K GG+I KGG N+K+L+ + A++ + D + +RV++ A
Sbjct: 4 ELLDDVTFRLLVSSNKAGGLIAKGGQNIKRLRSDYNATVSIPD--SSGPDRVLQIVA--- 58
Query: 453 LWNPRSQTIDAILQL----QNKTSEFSEKG----TITTRLLVPSSKVGCILGQGGHVINE 504
N + +D I +L + + S FS+ T T +LV +S+VG I+G+ G I E
Sbjct: 59 --NSKENGLDIIEELIPLIREEVSPFSDGEADPCTTTLSVLVQTSQVGAIIGRAGIKIKE 116
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHG 548
+R T+ ++V Q+ P S+E +V I G+ + ++ A G
Sbjct: 117 LRESTKTKVKV------FQECLPCSTESLVQINGTPDAVLLAIG 154
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/192 (24%), Positives = 85/192 (44%), Gaps = 33/192 (17%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D +R+L S K GG+I K G +K LR + A +++ D+ S P ++ +
Sbjct: 8 DVTFRLLVSSNKAGGLIAKGGQNIKRLRSDYNATVSIPDS------------SGPDRVLQ 55
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
++ + +E + +I E++ SD + + T T +LV
Sbjct: 56 IVANSKENGLDIIEELIP---------------LIREEV--SPFSDGEADPCTTTLSVLV 98
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
+ VG ++G+ G I+ LR T ++V PC+ T+ +VQI+G P+ A+
Sbjct: 99 QTSQVGAIIGRAGIKIKELRESTKTKVKVF--QECLPCS--TESLVQINGTPDAVLLAIG 154
Query: 307 EVSTLLHQNPRK 318
E+ + P K
Sbjct: 155 EIYVTCSEAPIK 166
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 42/68 (61%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
G + A T ++ P+ +G VIG+ G ++++R +QA+I +A+ +P +E+RVI I +
Sbjct: 263 GFAGEATTTLQVTIPNDLVGAVIGRGGERIRNIRSRSQAEIEIANPLPEAEDRVITIRGT 322
Query: 181 PTKIAKTQ 188
+I+ Q
Sbjct: 323 QEQISHAQ 330
Score = 46.6 bits (109), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 474 FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECI 533
F+ + T T ++ +P+ VG ++G+GG I +R R+QA+I + +P P + + +
Sbjct: 264 FAGEATTTLQVTIPNDLVGAVIGRGGERIRNIRSRSQAEIEIA-------NPLPEAEDRV 316
Query: 534 VDIRGSSEHLISAHGTYQSFM 554
+ IRG+ E + A Q+ +
Sbjct: 317 ITIRGTQEQISHAQFLLQNCI 337
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIII 177
S G + P T +L + ++G +IG+AG +K LRE T+ K+ V + +P S E ++ I
Sbjct: 83 SDGEADPCTTTLSVLVQTSQVGAIIGRAGIKIKELRESTKTKVKVFQECLPCSTESLVQI 142
Query: 178 YSSPTKI 184
+P +
Sbjct: 143 NGTPDAV 149
>gi|344266063|ref|XP_003405100.1| PREDICTED: poly(rC)-binding protein 2-like isoform 1 [Loxodonta
africana]
Length = 360
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 85/187 (45%), Gaps = 38/187 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQ 314
+ ++ +
Sbjct: 162 ICVVMLE 168
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
D T + L +PN+++GC++G++G I +R +GA I++ P +TD V
Sbjct: 277 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI-----ANPVEGSTDRQVT 331
Query: 294 ISGKPNVAKRALYEVSTLL 312
I+G A Y ++ L
Sbjct: 332 ITGSAASISLAQYLINVRL 350
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 282 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 334
Query: 539 SSEHL 543
S+ +
Sbjct: 335 SAASI 339
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|350409768|ref|XP_003488838.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
impatiens]
Length = 439
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 42/221 (19%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
KR+ G G+ +S + + + D R+L PS+ G +IGK G + LR +
Sbjct: 48 MKREADAGTMTGSGGPTSPHKRY---RQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQY 104
Query: 158 QAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVH 217
+A I V D PG E + I PT +L+V
Sbjct: 105 KASIIVPDC-PGPERVLTISSDLPT------------------------------VLQVL 133
Query: 218 DRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLP 277
+ ++ G D I R+LV + GC++GK G I+ LR +TGA I++
Sbjct: 134 NEVVPNLEENGSRHGSDE----IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYS 189
Query: 278 ADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRK 318
C +TD ++ I GKPN + E+ + +P K
Sbjct: 190 H----CCPHSTDRLISICGKPNTCIECIRELIATIKTSPLK 226
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 19/123 (15%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++L + G +IGKGG N+ +L+ + ASI V D P ERV+ S+
Sbjct: 77 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDCP--GPERVLTISS---------- 124
Query: 460 TIDAILQLQNKTS-EFSEKGT------ITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ +LQ+ N+ E G+ I R+LV S+ GCI+G+GG I E+R +T A
Sbjct: 125 DLPTVLQVLNEVVPNLEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGAR 184
Query: 513 IRV 515
I++
Sbjct: 185 IKI 187
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T ++ +P ++ G ++GK G I+++RS++GA I + D P + + D ++ I+G P+
Sbjct: 366 TTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI---DE--PLSGSNDRIITITGLPSQ 420
Query: 301 AKRALYEVSTLLHQN 315
+ A Y + +H+N
Sbjct: 421 IQMAQYLLQQSVHEN 435
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T ++ P G +IGK G ++ +R ++ A IT+ + + GS +R+I I P++I
Sbjct: 365 TTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMA 424
Query: 188 Q 188
Q
Sbjct: 425 Q 425
>gi|224142865|ref|XP_002324756.1| predicted protein [Populus trichocarpa]
gi|222866190|gb|EEF03321.1| predicted protein [Populus trichocarpa]
Length = 312
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/197 (27%), Positives = 91/197 (46%), Gaps = 52/197 (26%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
+I P ++G +IGK G +K L+ ++ AKI V D P S R++ + +P +IAK
Sbjct: 140 KIDVPQGRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNSPYRIVELMGTPEQIAKA 199
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR---- 243
+ ++D + E D G + TI+ R
Sbjct: 200 EQL-------------------------INDVLAEADAGG---------SGTISRRYAGQ 225
Query: 244 -------LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
+ +PNN VG ++GK GD I+ +++ +GA I+V+P LPP +T+ V I G
Sbjct: 226 GGSEHFSMKIPNNKVGLVIGKGGDSIKNMQARSGARIQVIPL-HLPPGDTSTERTVHIEG 284
Query: 297 ---KPNVAKRALYEVST 310
+ AK+ + EV++
Sbjct: 285 TSEQVEAAKQLVNEVTS 301
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 91/196 (46%), Gaps = 26/196 (13%)
Query: 370 GYGDQPSRMGSGSINSCP---PGQMGEV--SAEFSMKILCSAGKIGGVIGKGGFNVKQLQ 424
G+ P M S NS P P G + S KI G++G +IGKGG +K LQ
Sbjct: 104 GFSSAPPDMKSTISNSAPSSIPASYGSYPGGSGLSKKIDVPQGRVGVIIGKGGETIKYLQ 163
Query: 425 QETGASIHVE---DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
++GA I V DA +S R++ Q I+ +L ++ GTI+
Sbjct: 164 LQSGAKIQVTRDMDADPNSPYRIVELMGTPEQIAKAEQLINDVL----AEADAGGSGTIS 219
Query: 482 TR-----------LLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSS 530
R + +P++KVG ++G+GG I M+ R+ A I+V+ + P S+
Sbjct: 220 RRYAGQGGSEHFSMKIPNNKVGLVIGKGGDSIKNMQARSGARIQVIPLHLP---PGDTST 276
Query: 531 ECIVDIRGSSEHLISA 546
E V I G+SE + +A
Sbjct: 277 ERTVHIEGTSEQVEAA 292
>gi|296825084|ref|XP_002850758.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
gi|238838312|gb|EEQ27974.1| KH domain RNA-binding protein [Arthroderma otae CBS 113480]
Length = 367
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 79/332 (23%), Positives = 140/332 (42%), Gaps = 67/332 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ + G +RV+ +
Sbjct: 51 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG----------- 99
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
P A V ++E GM N N T + RLL+ +N
Sbjct: 100 --------------PLQGTSKAYSIVAKSLLEGAPQMGMGGVVQN-NGTHSVRLLISHNQ 144
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 145 MGTIIGRQGLKIKYIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAIWEIGK 200
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGG 370
L + ++ G PA A + S P + S+ S P GG
Sbjct: 201 CLIDDWQR-----------GTGTVLYNPAVRASV-----GSGPGQASAAG---SNPSYGG 241
Query: 371 YGDQPSRMGSGSINSCPPGQMG----------------EVSAEF-SMKILCSAGKIGGVI 413
+R G+G+ S PG G E E + I + +G +I
Sbjct: 242 NSRSYNRTGNGADFSDHPGSYGRRGNNDNPNRGIPLVTEDGEEVQTQNISIPSDMVGCII 301
Query: 414 GKGGFNVKQLQQETGASIHVEDAP-TDSDERV 444
G+GG + ++++ +GA I + AP D+ ER+
Sbjct: 302 GRGGTKISEIRRSSGARISIAKAPHDDTGERM 333
Score = 45.8 bits (107), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNP 456
+++ + S+ + G +IGK G NV L+ ETG V +RV+ + +G
Sbjct: 48 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKA 107
Query: 457 RSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
S ++L+ GT + RLL+ +++G I+G+ G I + + + +
Sbjct: 108 YSIVAKSLLEGAPQMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKYI--QDASGV 165
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
R+V + L P S+E IV+++G+ E + A
Sbjct: 166 RMVAQKEML----PQSTERIVEVQGTPEGIEKA 194
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 287 TQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKA----PHDDTGERMFTIMGSAQA 342
Query: 301 AKRALYEVSTLLHQNPRKDK 320
++ALY LL++N +K
Sbjct: 343 NEKALY----LLYENLEAEK 358
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +PS VGCI+G+GG I+E+RR + A I + A PH + E + I GS+
Sbjct: 287 TQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKA------PHDDTGERMFTIMGSA 340
Query: 541 E 541
+
Sbjct: 341 Q 341
>gi|426340771|ref|XP_004034301.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Gorilla gorilla
gorilla]
gi|426340773|ref|XP_004034302.1| PREDICTED: poly(rC)-binding protein 4 isoform 2 [Gorilla gorilla
gorilla]
gi|426340775|ref|XP_004034303.1| PREDICTED: poly(rC)-binding protein 4 isoform 3 [Gorilla gorilla
gorilla]
Length = 403
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 34/190 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRK 318
++ ++P K
Sbjct: 167 CAVILESPPK 176
Score = 62.4 bits (150), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 95 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGGMASDD-- 233
P I + E+ + P + LL + + +G + +
Sbjct: 155 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPTEVT 214
Query: 234 ---------------------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 215 KLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 274
Query: 273 IRV 275
I++
Sbjct: 275 IKI 277
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|300798415|ref|NP_001178812.1| poly(rC)-binding protein 4 [Rattus norvegicus]
Length = 403
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 135/329 (41%), Gaps = 76/329 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGSVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFP------------QAYG--GQNFHSPPAPMADMHPLGNSSWPA 354
++ ++P K P Q + GQ PA + + L + P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPF 226
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
+ S+ +P G PS S S EF L IG VIG
Sbjct: 227 ASPSV--VP--------GLDPSTQTS--------------SQEF----LVPNDLIGCVIG 258
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ G + +++Q +GA I + + + ER
Sbjct: 259 RQGSKISEIRQMSGAHIKIGNQAEGAGER 287
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|340718655|ref|XP_003397779.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like [Bombus
terrestris]
Length = 466
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 91/221 (41%), Gaps = 42/221 (19%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
KR+ G G+ +S + + + D R+L PS+ G +IGK G + LR +
Sbjct: 34 MKREADAGTMTGSGGPTSPHKRY---RQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQY 90
Query: 158 QAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVH 217
+A I V D PG E + I PT +L+V
Sbjct: 91 KASIIVPDC-PGPERVLTISSDLPT------------------------------VLQVL 119
Query: 218 DRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLP 277
+ ++ G D I R+LV + GC++GK G I+ LR +TGA I++
Sbjct: 120 NEVVPNLEENGSRHGSDE----IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYS 175
Query: 278 ADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRK 318
C +TD ++ I GKPN + E+ + +P K
Sbjct: 176 H----CCPHSTDRLISICGKPNTCIECIRELIATIKTSPLK 212
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 19/123 (15%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++L + G +IGKGG N+ +L+ + ASI V D P ERV+ S+
Sbjct: 63 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDCP--GPERVLTISS---------- 110
Query: 460 TIDAILQLQNKTS-EFSEKGT------ITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ +LQ+ N+ E G+ I R+LV S+ GCI+G+GG I E+R +T A
Sbjct: 111 DLPTVLQVLNEVVPNLEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGAR 170
Query: 513 IRV 515
I++
Sbjct: 171 IKI 173
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T ++ +P ++ G ++GK G I+++RS++GA I + P + + D ++ I+G P+
Sbjct: 393 TTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI-----DEPLSGSNDRIITITGLPSQ 447
Query: 301 AKRALYEVSTLLHQN 315
+ A Y + +H+N
Sbjct: 448 IQMAQYLLQQSVHEN 462
Score = 40.8 bits (94), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T ++ P G +IGK G ++ +R ++ A IT+ + + GS +R+I I P++I
Sbjct: 392 TTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMA 451
Query: 188 Q 188
Q
Sbjct: 452 Q 452
>gi|212542979|ref|XP_002151644.1| KH domain RNA-binding protein [Talaromyces marneffei ATCC 18224]
gi|210066551|gb|EEA20644.1| KH domain RNA-binding protein [Talaromyces marneffei ATCC 18224]
Length = 367
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/312 (22%), Positives = 135/312 (43%), Gaps = 36/312 (11%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R + S++ G +IGKAG V LR+ET K V+ + G +RV+ + A+
Sbjct: 50 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGGLQGCARA-- 107
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
+ LL+ ++ GG+ + N T RLL+ +N
Sbjct: 108 ----------------YSIVAKGLLEGAPQV----GMGGVVQN----NGTHPIRLLISHN 143
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 144 QMGTIIGRQGLKIKHIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAVWEIG 199
Query: 310 TLLHQNPRKDKPPSSF-PQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWM 368
L + ++ + P P+ D + N + +G +
Sbjct: 200 KCLIDDWQRGTGTVLYNPAVRVSVGGSGQPSHNGDRTGGSYGGGRSYNRTGNGADFSEPS 259
Query: 369 GGYGDQPSRMGSG-SINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQET 427
GGY +R GSG + N P + + I A +G +IG+GG + ++++ +
Sbjct: 260 GGY----NRRGSGDNANRSIPMVTDDGEEVQTQNISIPADMVGCIIGRGGSKISEIRRSS 315
Query: 428 GASIHVEDAPTD 439
GA I + AP D
Sbjct: 316 GARISIAKAPHD 327
Score = 45.4 bits (106), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
M +DD E T + +P +MVGC++G+ G I +R +GA I + A P
Sbjct: 277 MVTDDGEE--VQTQNISIPADMVGCIIGRGGSKISEIRRSSGARISIAKA----PHDETG 330
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNPRKDK 320
+ M I G ++ALY LL++N +K
Sbjct: 331 ERMFTIMGSAQANEKALY----LLYENLEAEK 358
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
SG + P + A +++ + S+ + G +IGK G NV L+ ETG V
Sbjct: 30 SGELEDQPKTEEEYAQAVLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQG 89
Query: 440 SDERVIRAS-AFEGLWNPRSQTIDAILQLQNKTSE---FSEKGTITTRLLVPSSKVGCIL 495
+RV+ + +G S +L+ + GT RLL+ +++G I+
Sbjct: 90 VHDRVLTVTGGLQGCARAYSIVAKGLLEGAPQVGMGGVVQNNGTHPIRLLISHNQMGTII 149
Query: 496 GQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
G+ G I + + + +R+V + L P S+E IV+++G+ E + A
Sbjct: 150 GRQGLKIKHI--QDASGVRMVAQKEML----PQSTERIVEVQGTPEGIEKA 194
Score = 40.0 bits (92), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +P+ VGCI+G+GG I+E+RR + A I + A PH + E + I GS+
Sbjct: 287 TQNISIPADMVGCIIGRGGSKISEIRRSSGARISIAKA------PHDETGERMFTIMGSA 340
Query: 541 E 541
+
Sbjct: 341 Q 341
>gi|396578134|ref|NP_001257528.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 2
[Rattus norvegicus]
Length = 524
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 166/424 (39%), Gaps = 77/424 (18%)
Query: 115 SREQSFG-----NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIP 168
+REQ G ++ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 101 AREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS 160
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
G+ E+ + I+++P E A +L++ +
Sbjct: 161 GAAEKPVTIHATP----------------------EGTSEACRMILEIMQK--------- 189
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+D+ + ++L N VG L+GK G ++++ ETG I + L N
Sbjct: 190 -EADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNP 246
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG 348
+ + + G A E+ L + +F N + P ++ LG
Sbjct: 247 ERTITVKGTIEACASAEMEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSALG 297
Query: 349 N-----SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSA------- 396
S P PS P+ P SG +S P
Sbjct: 298 IFSTGLSVLPPPAGPRGAPPSPPY------HPFATHSGYFSSLYPHHHFGPFPHHHSYPE 351
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLW 454
+ ++ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 352 QETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQF 411
Query: 455 NPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A
Sbjct: 412 KAQGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSA 466
Query: 512 DIRV 515
++ V
Sbjct: 467 EVIV 470
Score = 47.0 bits (110), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 38/190 (20%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSSP 181
S P + P++ +G +IGK G +K L A I +A P ER++II P
Sbjct: 348 SYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP 407
Query: 182 TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
K Q + + ++ EE+ F + E +
Sbjct: 408 EAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKLE 436
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---KP 298
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 437 AHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFAS 493
Query: 299 NVAKRALYEV 308
A+R + E+
Sbjct: 494 QTAQRKIREI 503
>gi|395832731|ref|XP_003789409.1| PREDICTED: poly(rC)-binding protein 4 [Otolemur garnettii]
Length = 403
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 34/190 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRK 318
++ ++P K
Sbjct: 167 CAVILESPPK 176
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 95 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGGMASDD-- 233
P I + E+ + P + LL + + +G + +
Sbjct: 155 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVT 214
Query: 234 ---------------------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 215 KLQQLSGHAVPFASPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 274
Query: 273 IRV 275
I++
Sbjct: 275 IKI 277
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|410952458|ref|XP_003982897.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 3 [Felis catus]
Length = 441
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 120/291 (41%), Gaps = 38/291 (13%)
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
+ D I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 128 SKDQARHTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 185
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 186 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 235
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G S + P Q + ++ + A +
Sbjct: 236 -LFPPTS----GMP-----------PPTSGPPSAMTPPYPQFEQAPETETVHLFIPALSV 279
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 280 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 334
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 335 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 385
>gi|227497228|ref|NP_067542.3| poly(rC)-binding protein 4 [Mus musculus]
gi|14715061|gb|AAH10694.1| Poly(rC) binding protein 4 [Mus musculus]
Length = 403
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 135/329 (41%), Gaps = 76/329 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGSVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFP------------QAYG--GQNFHSPPAPMADMHPLGNSSWPA 354
++ ++P K P Q + GQ PA + + L + P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPF 226
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
+ S+ +P G PS S S EF L IG VIG
Sbjct: 227 ASPSV--VP--------GLDPSTQTS--------------SQEF----LVPNDLIGCVIG 258
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ G + +++Q +GA I + + + ER
Sbjct: 259 RQGSKISEIRQMSGAHIKIGNQAEGAGER 287
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|351698877|gb|EHB01796.1| Poly(rC)-binding protein 4 [Heterocephalus glaber]
Length = 443
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 80/329 (24%), Positives = 134/329 (40%), Gaps = 76/329 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 60 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 113
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ +T RL++P
Sbjct: 114 -----------------HAVSMIAFK------LDEDLCAAPANGGSVSRPPVTLRLVIPA 150
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 151 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 206
Query: 309 STLLHQNPRKDKPPSSFPQ--------------AYGGQNFHSPPAPMADMHPLGNSSWPA 354
++ ++P K P + GQ PA + + L + P
Sbjct: 207 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPF 266
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
+ S+ +P G PS S S EF L IG VIG
Sbjct: 267 ASPSV--VP--------GLDPSAQTS--------------SQEF----LVPNDLIGCVIG 298
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ G + +++Q +GA I + + + ER
Sbjct: 299 RQGSKISEIRQMSGAHIKIGNQAEGAGER 327
Score = 55.5 bits (132), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 53 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 110
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 111 AVFHAV-SMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 169
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 170 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 200
>gi|326935820|ref|XP_003213964.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Meleagris
gallopavo]
Length = 232
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 44/193 (22%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L ++IG +IGK G VK +RE++ A+IT+++ GS ER+ I S
Sbjct: 21 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGS-------- 69
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLL 245
DA+ + I +EEDL G A+ + +T RL+
Sbjct: 70 ---------------------TDAVFRAVSMIAFKLEEDLGDGTAAG----RTPVTLRLV 104
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+P + G L+GK G I+ +R +GA ++V D LP +T+ V +SG P+ + +
Sbjct: 105 IPASQCGSLIGKAGTKIREIRESSGAQVQV-AGDLLP---NSTERAVTVSGVPDTIIQCV 160
Query: 306 YEVSTLLHQNPRK 318
++ ++ ++P K
Sbjct: 161 RQICAVILESPPK 173
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 80/155 (51%), Gaps = 14/155 (9%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG 452
++S ++++L +IG +IGK G VK++++++ A I + + ER+ + G
Sbjct: 14 QLSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG--SCPERI---TTITG 68
Query: 453 LWNPRSQTIDAI-LQLQNKTSEFSEKGT--ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
+ + + I +L+ + + G +T RL++P+S+ G ++G+ G I E+R +
Sbjct: 69 STDAVFRAVSMIAFKLEEDLGDGTAAGRTPVTLRLVIPASQCGSLIGKAGTKIREIRESS 128
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
A ++V G D P S+E V + G + +I
Sbjct: 129 GAQVQVAG------DLLPNSTERAVTVSGVPDTII 157
>gi|242063550|ref|XP_002453064.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
gi|241932895|gb|EES06040.1| hypothetical protein SORBIDRAFT_04g037690 [Sorghum bicolor]
Length = 343
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 136/324 (41%), Gaps = 61/324 (18%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIII 177
G+ + T R L + G +IGK G+ + + ++ A+I ++ + PG+ +R+I++
Sbjct: 33 GDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMV 92
Query: 178 YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN 237
D ++K + I+E+ L G ++
Sbjct: 93 -----------------------------SGLFDEVMKAMELILEKLLAEGEEFNEAEAR 123
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG- 296
+ RL+VPN+ G ++GK G I+ E+ A I++ P D D +V ++G
Sbjct: 124 PKV--RLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDN--NYVGLHDRLVTVTGT 179
Query: 297 ---KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNF-HSPPAPMADMHPLGNSSW 352
+ N L ++S +H P P FP Y G F + P P+ M P
Sbjct: 180 FDNQMNAIDLILKKLSEDVHYPPNLSSP---FP--YAGLTFPNYPGVPVGYMIP----QV 230
Query: 353 PARNSSLHGMPSTPWMGGY-GDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGG 411
P N+ +G P+ + G Y ++P S P A+ S+ I + IG
Sbjct: 231 PYNNAVNYG-PNNGYGGRYQNNKP---------STPMRSPASNEAQESLTIGIADEHIGA 280
Query: 412 VIGKGGFNVKQLQQETGASIHVED 435
V+G+ G N+ ++ Q +GA I + D
Sbjct: 281 VVGRAGRNITEIIQASGARIKISD 304
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 8/121 (6%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT---DSDERVIRASAFEGLWNP 456
++ L S G +IGKGG + Q ++GA I + + +++R+I S GL++
Sbjct: 42 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVS---GLFDE 98
Query: 457 RSQTIDAILQ-LQNKTSEFSE-KGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ ++ IL+ L + EF+E + RL+VP+S G I+G+GG I + A I+
Sbjct: 99 VMKAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIK 158
Query: 515 V 515
+
Sbjct: 159 I 159
Score = 40.8 bits (94), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 10/67 (14%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPH---PGSSECIVDIRGS 539
R LV ++ GCI+G+GG IN+ + ++ GAR++L H PG+++ I+ + G
Sbjct: 43 RFLVSNTAAGCIIGKGGSTINDFQSQS-------GARIQLSRSHEFFPGTNDRIIMVSGL 95
Query: 540 SEHLISA 546
+ ++ A
Sbjct: 96 FDEVMKA 102
>gi|291393785|ref|XP_002713277.1| PREDICTED: poly(rC) binding protein 4 [Oryctolagus cuniculus]
Length = 403
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 90/190 (47%), Gaps = 34/190 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRK 318
++ ++P K
Sbjct: 167 CAVILESPPK 176
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 95 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGGMASDD-- 233
P I + E+ + P + LL + + +G + +
Sbjct: 155 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFPVQGQYGAVTPAEVT 214
Query: 234 ---------------------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 215 KLQQLSGHAVPFASPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 274
Query: 273 IRV 275
I++
Sbjct: 275 IKI 277
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|396578132|ref|NP_001257527.1| insulin-like growth factor 2 mRNA-binding protein 2 isoform 1
[Rattus norvegicus]
gi|149019899|gb|EDL78047.1| similar to IGF-II mRNA-binding protein 2 (predicted) [Rattus
norvegicus]
Length = 592
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 91/424 (21%), Positives = 166/424 (39%), Gaps = 77/424 (18%)
Query: 115 SREQSFG-----NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIP 168
+REQ G ++ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 169 AREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS 228
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
G+ E+ + I+++P E A +L++ +
Sbjct: 229 GAAEKPVTIHATP----------------------EGTSEACRMILEIMQK--------- 257
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+D+ + ++L N VG L+GK G ++++ ETG I + L N
Sbjct: 258 -EADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNP 314
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG 348
+ + + G A E+ L + +F N + P ++ LG
Sbjct: 315 ERTITVKGTIEACASAEMEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSALG 365
Query: 349 N-----SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSA------- 396
S P PS P+ P SG +S P
Sbjct: 366 IFSTGLSVLPPPAGPRGAPPSPPY------HPFATHSGYFSSLYPHHHFGPFPHHHSYPE 419
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLW 454
+ ++ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 420 QETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQF 479
Query: 455 NPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A
Sbjct: 480 KAQGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSA 534
Query: 512 DIRV 515
++ V
Sbjct: 535 EVIV 538
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 45/190 (23%), Positives = 79/190 (41%), Gaps = 38/190 (20%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSSP 181
S P + P++ +G +IGK G +K L A I +A P ER++II P
Sbjct: 416 SYPEQETVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPP 475
Query: 182 TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
K Q + + ++ EE+ F + E +
Sbjct: 476 EAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKLE 504
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---KP 298
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 505 AHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFAS 561
Query: 299 NVAKRALYEV 308
A+R + E+
Sbjct: 562 QTAQRKIREI 571
>gi|432887611|ref|XP_004074938.1| PREDICTED: far upstream element-binding protein 3-like [Oryzias
latipes]
Length = 562
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 95/457 (20%), Positives = 172/457 (37%), Gaps = 124/457 (27%)
Query: 113 NSSREQSFGNS------QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT 166
N S + GN Q A T P + +G +IGK G + +++E+ KI +A
Sbjct: 62 NRSLDNGVGNHLGAMVHQRALTTEDFKVPDKMVGFIIGKGGEQISRIQQESGCKIQIASD 121
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G +R + SP I + + ++ IIE+ +
Sbjct: 122 SGGMLDRPCTLTGSPENIEQAK--------------------------RLLSEIIEQCRY 155
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
G +D + N +I ++L+P N VG ++GK G+ I++L+ TG + ++ D +P A
Sbjct: 156 GPGFHNDMDGNGSIQ-QMLIPANKVGLVIGKGGETIKQLQERTGVQMMMIQDDPMPTGA- 213
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
D+ ++I+G P ++A V L+ +DK F
Sbjct: 214 --DKPLRITGDPLKVQQARELVVKLI-----RDKDQGDFRT------------------- 247
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
G + S+MG S++ P F++ I
Sbjct: 248 -----------------------GRAEFGSKMGGTSLDVVVP--------RFAVGI---- 272
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQ 466
+IG+ G +K++Q + G I + S +RV + + I+ ++Q
Sbjct: 273 -----IIGRNGEMIKKIQNDAGVRIQFKQDDGISPDRVAQVMGQPEHCHHAVHLINELVQ 327
Query: 467 LQNKTSEF--------------SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ + G VP+ K G ++G+GG I ++ +++
Sbjct: 328 TAQERDGYGVMGRRGRVDCNTGGAGGLQEVTYAVPADKCGLVIGKGGETIKNIKEQSR-- 385
Query: 513 IRVVGARVKLQDPHPGSSE---CIVDIRGSSEHLISA 546
A V+LQ P S++ I IRG+ + L A
Sbjct: 386 -----AHVELQRNPPPSTDPNVRIFSIRGTPQQLEKA 417
>gi|328709627|ref|XP_003244018.1| PREDICTED: poly(rC)-binding protein 3-like isoform 2 [Acyrthosiphon
pisum]
Length = 525
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 84/152 (55%), Gaps = 14/152 (9%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLWNP 456
+++++ ++G +IGK G VK+ ++E+GA I++ D ER++ S + E ++
Sbjct: 13 LTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTISGSTEAIYKA 70
Query: 457 RS---QTIDAILQLQNKTSEFSEKGT--ITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
S ++ +++QN + + G +T RL+VP+S+ G ++G+GG+ I E+R T A
Sbjct: 71 FSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATGA 130
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
I+V D P S+E V + G+ + +
Sbjct: 131 QIQVA------SDVLPQSTERAVTLTGTRDSI 156
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 40/214 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R++ +++G +IGK G IVK REE+ AKI ++D GS ER++ I S I K
Sbjct: 15 LRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTISGSTEAIYK-- 69
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
+ C + +++ + G +T RL+VP
Sbjct: 70 -------------AFSLICTKVEEFIEMQNGKTGATAIG---------KCGMTLRLIVPA 107
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G+ I+ +R TGA I+V +D LP +T+ V ++G + + ++ +
Sbjct: 108 SQCGSLIGKGGNKIKEIREATGAQIQV-ASDVLP---QSTERAVTLTGTRDSITQCIFHI 163
Query: 309 STLLHQNPRKD-------KPPSSFPQAY-GGQNF 334
++ ++P K KP P GGQ F
Sbjct: 164 CAVMVESPPKGVTIPYRAKPQMGAPVILAGGQAF 197
Score = 46.2 bits (108), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
A D+ N ++T RL++ VG ++GK+G++++R R E+GA I + +D P +
Sbjct: 3 AKSKDDSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI--SDGSCP-----E 55
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQ 314
+V ISG +A + T + +
Sbjct: 56 RIVTISGSTEAIYKAFSLICTKVEE 80
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%), Gaps = 1/72 (1%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + VPN+++GC++GK G I +R +GA IR+ + A +TD + I+G P+
Sbjct: 315 THEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSA-STDRTITITGNPDS 373
Query: 301 AKRALYEVSTLL 312
A Y ++ L
Sbjct: 374 VALAQYLINMSL 385
>gi|367027192|ref|XP_003662880.1| hypothetical protein MYCTH_2304021 [Myceliophthora thermophila ATCC
42464]
gi|347010149|gb|AEO57635.1| hypothetical protein MYCTH_2304021 [Myceliophthora thermophila ATCC
42464]
Length = 374
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 129/316 (40%), Gaps = 44/316 (13%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGK G V LREET K V+ + G +RV+ I I++
Sbjct: 53 RAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSKVVQGVYDRVLTISGGCEAISR---- 108
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
A V ++E GM N N T +LL+ +N
Sbjct: 109 ---------------------AYSVVARSLLEGAPTMGMGGVIQN-NGTHPIKLLISHNQ 146
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P +RA++E+
Sbjct: 147 MGTIIGRQGLKIKYIQDVSG--VRMVAQKEMLP--QSTERIVEVQGTPEGIQRAVWEICK 202
Query: 311 LLHQNPRKDKP-----PSSFPQAYGGQNFHSPPAPMADMHPLGNS--SWPARNSSLHGMP 363
L + ++ P Q G + M D P G S + + G
Sbjct: 203 CLVDDWQRGTGTVLYNPVVRTQGVGAPGISGGSSYMQDRAPYGGSRVTRTGNGADFSGGG 262
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
S P+ P+ G PP + I A +G +IG+ G + ++
Sbjct: 263 SRPYTRRSDSDPAARG-------PPTHDENGEEIQTQNISIPADMVGCIIGRAGSKISEI 315
Query: 424 QQETGASIHVEDAPTD 439
++ +GA I + AP D
Sbjct: 316 RKTSGARISIAKAPHD 331
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLWN 455
+ +++ + S+ + G +IGKGG NV L++ETG V +RV+ S E +
Sbjct: 49 QLTLRAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSKVVQGVYDRVLTISGGCEAISR 108
Query: 456 PRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
S ++L+ GT +LL+ +++G I+G+ G I + + +
Sbjct: 109 AYSVVARSLLEGAPTMGMGGVIQNNGTHPIKLLISHNQMGTIIGRQGLKIKYI--QDVSG 166
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+R+V + L P S+E IV+++G+ E +
Sbjct: 167 VRMVAQKEML----PQSTERIVEVQGTPEGI 193
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
D+N T + +P +MVGC++G+ G I +R +GA I + A P + M
Sbjct: 283 DENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA----PHDETGERMF 338
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKDK 320
I G + AL+ LL++N +K
Sbjct: 339 TIMGSAKANETALF----LLYENLEAEK 362
>gi|345780248|ref|XP_003431966.1| PREDICTED: insulin-like growth factor 2 mRNA binding protein 3
[Canis lupus familiaris]
Length = 441
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/291 (22%), Positives = 120/291 (41%), Gaps = 38/291 (13%)
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
+ D I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 128 SKDQARHTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 185
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 186 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 235
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G S + P Q + ++ + A +
Sbjct: 236 -LFPPTS----GMP-----------PPTSGPPSAMTPPYPQFEQAPQTETVHLFIPALSV 279
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 280 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 334
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 335 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 385
>gi|380792087|gb|AFE67919.1| poly(rC)-binding protein 2 isoform g, partial [Macaca mulatta]
Length = 193
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 96/208 (46%), Gaps = 38/208 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN------ 66
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
A A + D++ EED+ M + +T RL+VP +
Sbjct: 67 ------------------AIFKAFAMIIDKL-EEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + ++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQIC 163
Query: 310 TLLHQNPRKD-----KP-PSSFPQAYGG 331
++ ++P K +P PSS P + G
Sbjct: 164 VVMLESPPKGVTIPYRPKPSSSPVIFAG 191
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 87/157 (55%), Gaps = 16/157 (10%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAFEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNA 67
Query: 453 LWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+R
Sbjct: 68 IFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E + I G + +I
Sbjct: 126 STGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 42.4 bits (98), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
+D N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 7 EDGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|432092458|gb|ELK25073.1| Poly(rC)-binding protein 4 [Myotis davidii]
Length = 403
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 133/321 (41%), Gaps = 60/321 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCSAPANGGTVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL-----HGMP 363
++ ++P K P G S + G + PA + L H +P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQSQYGGVT-PAEVTKLQQLSGHAVP 225
Query: 364 -STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+P M + PG + S + L IG VIG+ G + +
Sbjct: 226 FGSPSM--------------VPGLDPG-----AQTSSQEFLVPNDLIGCVIGRQGSKISE 266
Query: 423 LQQETGASIHVEDAPTDSDER 443
++Q +GA I + + + ER
Sbjct: 267 IRQMSGAHIKIGNQAEGAGER 287
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 81/162 (50%), Gaps = 24/162 (14%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI-----TTRLLVPSSKVGCILGQGGHVI 502
+ F + ++ A ++ S + GT+ T RL++P+S+ G ++G+ G I
Sbjct: 71 AVFHAV------SMIAFKLDEDLCSAPANGGTVSRPPVTLRLVIPASQCGSLIGKAGTKI 124
Query: 503 NEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
E+R T A ++V G D P S+E V + G + +I
Sbjct: 125 KEIRETTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|449449385|ref|XP_004142445.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
gi|449527683|ref|XP_004170839.1| PREDICTED: RNA-binding protein Nova-2-like [Cucumis sativus]
Length = 326
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 126/317 (39%), Gaps = 77/317 (24%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKI 184
T R L + G VIGK G+ + + ++ A+I ++ + PG+ +R+I++ S +I
Sbjct: 35 TYIRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEI 94
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
K +ME A L ++H A + D+ RL
Sbjct: 95 LK---------------AMELVLA--KLLSELH------------AEEGDDVEPRTKVRL 125
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
+VP++ G ++GK G I+ ++ A I++ P D +TD +V +SG RA
Sbjct: 126 IVPHSSCGAIIGKGGSTIKSFIEDSQAGIKISPQDN--NYMASTDRLVTLSGTIEEQMRA 183
Query: 305 LYEVSTLLHQNPRKDKP---PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHG 361
+ + L ++P + P S+P ++ N+ S
Sbjct: 184 TDLIVSKLSEDPHYTQSMNYPFSYPTSFNAMNYGSNGGGTGGRFQ--------------- 228
Query: 362 MPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF---SMKILCSAGKIGGVIGKGGF 418
N+ P + E+ E S+ I S G IG V+G+GG
Sbjct: 229 ----------------------NNKPDTRSSEIVQEERNNSLTIGVSDGHIGLVVGRGGR 266
Query: 419 NVKQLQQETGASIHVED 435
N+ ++ Q +GA I + D
Sbjct: 267 NILEISQASGARIKISD 283
Score = 49.3 bits (116), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/121 (28%), Positives = 57/121 (47%), Gaps = 6/121 (4%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV----EDAPTDSDERVIRASAFEGLWN 455
++ L S G VIGKGG + Q ++GA I + E P +D ++ + + +
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTINDFQSQSGARIQLSRNHEFFPGTTDRIIMVSGSINEILK 96
Query: 456 PRSQTIDAIL-QLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ +L +L + + E T RL+VP S G I+G+GG I +QA I+
Sbjct: 97 AMELVLAKLLSELHAEEGDDVEPRT-KVRLIVPHSSCGAIIGKGGSTIKSFIEDSQAGIK 155
Query: 515 V 515
+
Sbjct: 156 I 156
>gi|67971394|dbj|BAE02039.1| unnamed protein product [Macaca fascicularis]
Length = 316
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/290 (24%), Positives = 122/290 (42%), Gaps = 39/290 (13%)
Query: 231 SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE 290
+ D I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 5 AQDIKFTEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPER 62
Query: 291 MVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNS 350
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 63 TITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG-- 111
Query: 351 SWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIG 410
+P + GMP P G PS M PP E S ++ + A +G
Sbjct: 112 LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSVG 155
Query: 411 GVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNK 470
+IGK G ++KQL + GASI + AP ++ + +R G P A ++ K
Sbjct: 156 AIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYGK 210
Query: 471 TSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 211 IKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 260
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 90/206 (43%), Gaps = 39/206 (18%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT-IPGSEERVIIIYSSPTKIA 185
+TV+ + P+ +G +IGK G +K L A I +A P ++ R++II P
Sbjct: 143 ETVH-LFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIITGPPEAQF 201
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
K Q + ++ +I EE+ E + A +
Sbjct: 202 KAQGR-------------------------IYGKIKEENFV------SPKEEVKLEAHIR 230
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---KPNVAK 302
VP+ G ++GK G + L++ + A + V+P D+ P N +V+I+G VA+
Sbjct: 231 VPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP--DENDQVVVKITGHFYACQVAQ 287
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQA 328
R + E+ T + Q+ ++ S PQ+
Sbjct: 288 RKIQEILTQVKQHQQQKALQSGPPQS 313
>gi|259487459|tpe|CBF86155.1| TPA: KH domain RNA binding protein (AFU_orthologue; AFUA_2G04940)
[Aspergillus nidulans FGSC A4]
Length = 465
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 97/417 (23%), Positives = 163/417 (39%), Gaps = 94/417 (22%)
Query: 79 CCIMDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRK 138
+ DA K + +P + G GN S R Q N R + S++
Sbjct: 66 TVVPDAPKGGVSETQP---IQSTASHGEAAGNQSEQQRPQDESNW----IHIRAVISSQE 118
Query: 139 IGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAET 198
VIGK G V +R + AK TV+D G+ ER++ + S P
Sbjct: 119 AATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTV-SGP----------------- 160
Query: 199 KKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKR 258
QDA+ K II + + ++ T RLL+P+ ++G ++GK
Sbjct: 161 -----------QDAVAKAFGLIIRTLNNEPLDAASTAQSKTYPLRLLIPHILIGSIIGKG 209
Query: 259 GDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS-TLLHQNPR 317
G I+ ++ +GA R+ +D P ++T+ + I G + A Y V+ TL+ Q
Sbjct: 210 GTRIREIQDASGA--RLNASDACLP--LSTERSLVILGVADAVHIATYYVAVTLVEQLTE 265
Query: 318 KDKPPSS-----------------------FPQAYGGQNFHSPPAPMADMHP----LGNS 350
+ P++ PQ GGQ H P HP G
Sbjct: 266 RFGGPAASAYATRSGGPAGAVPGGMQVVPYVPQPAGGQYGH--PDTFKRHHPGQARAGAG 323
Query: 351 SW------------PARNSSLH-GMPSTPWMGGYGDQPSRMGS--------GSINSCPPG 389
++ P +H G P TP+ G QP+ G+ G + P G
Sbjct: 324 AYGVPYLHGQHAPAPVAPQPMHYGAPQTPYAGAGPHQPTPYGAPQAAQPRGGPTPAAPVG 383
Query: 390 QMGEVSAE-FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
G + + + +I +G +IGKGG + +++ +G+ I + + +S+ER++
Sbjct: 384 --GAMPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQENSNERLV 438
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 64/129 (49%), Gaps = 14/129 (10%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
++ + S+ + VIGKGG NV Q+++ +GA V D + ER++ S G + ++
Sbjct: 110 IRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVS---GPQDAVAK 166
Query: 460 TIDAILQLQNK----TSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
I++ N + ++ T RLL+P +G I+G+GG I E++ +
Sbjct: 167 AFGLIIRTLNNEPLDAASTAQSKTYPLRLLIPHILIGSIIGKGGTRIREIQDAS------ 220
Query: 516 VGARVKLQD 524
GAR+ D
Sbjct: 221 -GARLNASD 228
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+T ++ +P+ VG I+G+GG INE+R + G+ +K+ +P S+E +V I G+
Sbjct: 391 LTQQIYIPNDMVGAIIGKGGAKINEIR-------HLSGSVIKINEPQENSNERLVTITGT 443
Query: 540 SE 541
E
Sbjct: 444 QE 445
>gi|363746094|ref|XP_003643523.1| PREDICTED: poly(rC)-binding protein 4-like, partial [Gallus gallus]
Length = 239
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 93/193 (48%), Gaps = 44/193 (22%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L ++IG +IGK G VK +RE++ A+IT+++ GS ER+ I S
Sbjct: 21 LRMLMHGKEIGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGS-------- 69
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLL 245
DA+ + I +EEDL G A+ + +T RL+
Sbjct: 70 ---------------------TDAVFRAVSMIAFKLEEDLGDGTAAG----RTPVTLRLV 104
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+P + G L+GK G I+ +R +GA ++V D LP +T+ V +SG P+ + +
Sbjct: 105 IPASQCGSLIGKAGTKIREIRESSGAQVQV-AGDLLP---NSTERAVTVSGVPDTIIQCV 160
Query: 306 YEVSTLLHQNPRK 318
++ ++ ++P K
Sbjct: 161 RQICAVILESPPK 173
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 80/155 (51%), Gaps = 14/155 (9%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG 452
++S ++++L +IG +IGK G VK++++++ A I + + ER+ + G
Sbjct: 14 QLSITLTLRMLMHGKEIGSIIGKKGETVKRIREQSSARITISEG--SCPERI---TTITG 68
Query: 453 LWNPRSQTIDAI-LQLQNKTSEFSEKGT--ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
+ + + I +L+ + + G +T RL++P+S+ G ++G+ G I E+R +
Sbjct: 69 STDAVFRAVSMIAFKLEEDLGDGTAAGRTPVTLRLVIPASQCGSLIGKAGTKIREIRESS 128
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
A ++V G D P S+E V + G + +I
Sbjct: 129 GAQVQVAG------DLLPNSTERAVTVSGVPDTII 157
>gi|17384400|emb|CAD13196.1| hnRNP-E2 protein copy b [Xenopus laevis]
Length = 251
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/232 (25%), Positives = 100/232 (43%), Gaps = 38/232 (16%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSE 171
+SS S +S+P T+ R++ P+ + G +IGK G +K +RE T A++ VA D +P S
Sbjct: 16 SSSMTNSTASSKPPVTL-RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST 74
Query: 172 ERVIIIYSSPTKIAKTQNKDDDSAAET----------KKESMEP--------------HC 207
ER I I P I + + E+ K S P +
Sbjct: 75 ERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQAYTIQGQYA 134
Query: 208 AAQDALLKVHDRIIEEDLF-------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGD 260
Q L K+H +++ F G + D + L +PN+++GC++G++G
Sbjct: 135 IPQPDLTKLHQLAMQQSHFPMSHSGNTGFSGGIDASAQATSHELTIPNDLIGCIIGRQGA 194
Query: 261 VIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
I +R +GA I++ P + D V I+G A Y ++ L
Sbjct: 195 KINEIRQMSGAQIKI-----ANPVEGSNDRQVTITGSTASISLAQYLINVRL 241
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 107/238 (44%), Gaps = 44/238 (18%)
Query: 221 IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
+EED+ M + + +T RL+VP + G L+GK G I+ +R TGA ++V D
Sbjct: 11 LEEDISSSMTNSTASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDM 69
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKD-----KP-PSSFP------QA 328
LP +T+ + I+G P + ++ ++ ++P K +P PSS P QA
Sbjct: 70 LPN---STERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQA 126
Query: 329 YGGQNFHSPPAP-MADMHPLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINS 385
Y Q ++ P P + +H L S +P +S G SG I++
Sbjct: 127 YTIQGQYAIPQPDLTKLHQLAMQQSHFPMSHSGNTGF-----------------SGGIDA 169
Query: 386 CPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
E++ + IG +IG+ G + +++Q +GA I + + S++R
Sbjct: 170 SAQATSHELTIPNDL--------IGCIIGRQGAKINEIRQMSGAQIKIANPVEGSNDR 219
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 472 SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSE 531
S S K +T RL+VP+S+ G ++G+GG I E+R T A ++V G D P S+E
Sbjct: 22 STASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG------DMLPNSTE 75
Query: 532 CIVDIRGSSEHLI 544
+ I G + +I
Sbjct: 76 RAITIAGIPQSII 88
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%), Gaps = 7/61 (11%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEH 542
L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS+
Sbjct: 177 ELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSNDRQVTITGSTAS 229
Query: 543 L 543
+
Sbjct: 230 I 230
>gi|357615456|gb|EHJ69667.1| putative igf2 mRNA binding protein [Danaus plexippus]
Length = 599
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 90/418 (21%), Positives = 169/418 (40%), Gaps = 85/418 (20%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIYSSPT 182
P D R+L S +G +IG+ G+ ++ + ++++A++ V D + GS E+ I IY +P
Sbjct: 136 PTDFPLRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVHRKDNV-GSLEKAITIYGNP- 193
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS-TIT 241
D+ K +E M + +N N I
Sbjct: 194 ----------DNCTNACKRILEV-----------------------MQQEANNTNKGEIC 220
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
++L NN++G ++GK G+ I+R+ ET I V + + + N + ++ + G
Sbjct: 221 LKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDIN--SFNLERIITVKGTIENM 278
Query: 302 KRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHG 361
+A ++S L Q+ D Q Q+ P +HP+
Sbjct: 279 AKAESQISAKLRQSYEND------LQVLAPQSIMFP-----GLHPMAM------------ 315
Query: 362 MPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVK 421
M + G + Q G ++ + + +G +IG G +++
Sbjct: 316 MSTGRGFCGAPPPFPPPIYAPLAGQGGAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHIR 375
Query: 422 QLQQETGASIHVEDAPTDSDERVIRASA-------FEGLWNPRSQTIDAILQLQNKTSEF 474
+ + + AS+ + AP + D +VI S + +P +Q L + E
Sbjct: 376 NIIRFSNASVKI--APLEQD-KVIEGSVAAQQERKVTIVGSPEAQWKAQYLIFEKMREEG 432
Query: 475 SEKGT----ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKL-QDPHP 527
G+ +T ++V SS+VG I+G+GG + E++ RV G+ +KL + P P
Sbjct: 433 FMSGSDDVRLTVAIVVASSQVGRIIGKGGQNVRELQ-------RVTGSLIKLPEQPQP 483
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 74/346 (21%), Positives = 131/346 (37%), Gaps = 97/346 (28%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEER 173
+Q N+ + +IL + IG +IGK GN +K + +ET KITV+ D + ER
Sbjct: 208 QQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVSSINDINSFNLER 267
Query: 174 VIIIYSSPTKIAKT---------QNKDDDSAAETKKESMEP-------------HCAAQD 211
+I + + +AK Q+ ++D + M P C A
Sbjct: 268 IITVKGTIENMAKAESQISAKLRQSYENDLQVLAPQSIMFPGLHPMAMMSTGRGFCGAPP 327
Query: 212 ALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGA 271
I L G + +S T L +PNN VG ++G +G I+ + + A
Sbjct: 328 PFPPP----IYAPLAGQGGAQQGAGDSQETTYLYIPNNAVGAIIGTKGSHIRNIIRFSNA 383
Query: 272 NIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGG 331
++++ P ++ D++++ ++ Q RK S P+A
Sbjct: 384 SVKIAPLEQ--------DKVIE---------------GSVAAQQERKVTIVGS-PEA--- 416
Query: 332 QNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQM 391
W A+ M +M G D
Sbjct: 417 -------------------QWKAQYLIFEKMREEGFMSGSDD------------------ 439
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP 437
++ I+ ++ ++G +IGKGG NV++LQ+ TG+ I + + P
Sbjct: 440 ----VRLTVAIVVASSQVGRIIGKGGQNVRELQRVTGSLIKLPEQP 481
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/150 (22%), Positives = 76/150 (50%), Gaps = 6/150 (4%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+F +++L + +G +IG+ G ++ + Q++ A + V D+ + +A G +
Sbjct: 138 DFPLRLLVQSDMVGAIIGRQGSTIRLITQQSRARVDVH--RKDNVGSLEKAITIYGNPDN 195
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ IL++ + + + KG I ++L ++ +G I+G+GG+ I + + T I V
Sbjct: 196 CTNACKRILEVMQQEANNTNKGEICLKILAHNNLIGRIIGKGGNTIKRIMQETDTKITVS 255
Query: 517 GARVKLQDPHPGSSECIVDIRGSSEHLISA 546
+ D + + E I+ ++G+ E++ A
Sbjct: 256 S----INDINSFNLERIITVKGTIENMAKA 281
>gi|297810533|ref|XP_002873150.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
gi|297318987|gb|EFH49409.1| hypothetical protein ARALYDRAFT_487225 [Arabidopsis lyrata subsp.
lyrata]
Length = 334
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 79/331 (23%), Positives = 134/331 (40%), Gaps = 74/331 (22%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEER 173
+ S +S T R L + G VIGK G+ + + ++ A+I ++ + PG+ +R
Sbjct: 24 DSSEADSAEKPTHIRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDR 83
Query: 174 VIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDD 233
+I+I S ++ + L + D++ E + ++D
Sbjct: 84 IIMISGSIKEVI-------------------------NGLELILDKLHSE-----LHAED 113
Query: 234 DNE-NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
NE RL+VPN+ G ++GK G I+ E+ A I++ P D +D +V
Sbjct: 114 GNEVEPRRRIRLVVPNSSCGGIIGKGGATIKSFIEESKAGIKISPLDNTFYGL--SDRLV 171
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGG---QNFHSPPAPMADMHPLGN 349
+SG RA+ + L ++ + S P +Y G FH PP A
Sbjct: 172 TLSGTFEEQMRAIDLILAKLTEDDHYSQNVHS-PYSYAGLFYSGFHGPPYAYA------- 223
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEV-----SAEFSMKILC 404
+PS + G S+N P G G+ A ++ I
Sbjct: 224 ------------LPSV----------ATAGYNSVNYAPNGSGGKYQNHKDEASTTVTIGV 261
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
+ IG V+G+GG N+ ++ Q TGA I + D
Sbjct: 262 ADEHIGLVLGRGGRNIMEITQITGARIKISD 292
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 75/154 (48%), Gaps = 14/154 (9%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV----EDAPTDSDERVIRASAFEGLWN 455
++ L S G VIGKGG + + Q ++GA I + E P +D ++ + + + + N
Sbjct: 37 IRFLVSNAAAGSVIGKGGSTITEFQAKSGARIQLSRNQEFFPGTTDRIIMISGSIKEVIN 96
Query: 456 PRSQTIDAI---LQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+D + L ++ +E + I RL+VP+S G I+G+GG I ++A
Sbjct: 97 GLELILDKLHSELHAEDG-NEVEPRRRI--RLVVPNSSCGGIIGKGGATIKSFIEESKAG 153
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
I++ L + G S+ +V + G+ E + A
Sbjct: 154 IKI----SPLDNTFYGLSDRLVTLSGTFEEQMRA 183
>gi|460771|emb|CAA55016.1| hnRNP-E1 [Homo sapiens]
Length = 356
Score = 67.4 bits (163), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 142/347 (40%), Gaps = 72/347 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 161
Query: 308 VSTLLHQN------------PRKDKPPSSFPQAYGGQNFHSPPA--PMADMHPLGNSSWP 353
+ ++ + P + P SS GGQ+ S P A H L P
Sbjct: 162 ICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAVGYPHAT-HDL--EGPP 218
Query: 354 ARNSSLHGMPS-TPWMGGYGDQPSR-----------MGSGSINSCPPGQMG-----EVSA 396
S+ G + +P +Q +R G I+S P G + S
Sbjct: 219 LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDAST 278
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ + ++ IG +IG+ G N+ +++Q +GA I + + S R
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGR 325
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTERAITIAG 150
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSA 333
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 334 ASISLAQYLINARLSSEKGM 353
>gi|440894384|gb|ELR46853.1| Far upstream element-binding protein 3, partial [Bos grunniens
mutus]
Length = 542
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 132/328 (40%), Gaps = 82/328 (25%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKIA 185
TV I P+ K+G VIGK G +K L+E T K+ + +P ++ + I P K+
Sbjct: 135 TVQEIPIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 194
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
+ A++ +L++ + D F G+ D + + +
Sbjct: 195 Q----------------------AREMVLEIIREKDQAD-FRGVRGDFSSRMGGGSIEVS 231
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P+ + A
Sbjct: 232 VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMGPPDRCQHAA 286
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST 365
+ +S L+ +D +GG +A G W
Sbjct: 287 HVISELILTAQERD--------GFGG-------LAVARGRGRGRGDW------------- 318
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
S+ + PG + EV+ A K G VIGKGG N+K + Q
Sbjct: 319 ----------------SVGT--PGGIQEVT------YTVPADKCGLVIGKGGENIKSINQ 354
Query: 426 ETGASIHVEDAPTDSDERVIRASAFEGL 453
++GA + ++ P S + +R GL
Sbjct: 355 QSGAHVELQRNPPPSTDPNLRIFTIRGL 382
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 176/476 (36%), Gaps = 134/476 (28%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 56 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTP------------ 103
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR F +D + NST+ + +P + VG
Sbjct: 104 -------ESIE---QAKRLLGQIVDRCRNGPGF----HNDVDGNSTVQ-EIPIPASKVGL 148
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G P ++A V ++
Sbjct: 149 VIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIR 205
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G GD
Sbjct: 206 EKDQAD-----------------------------------------------FRGVRGD 218
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SRMG GSI P F++ I VIG+ G +K++Q + G I
Sbjct: 219 FSSRMGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 261
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF------------------- 474
+ S ER + + I ++ + F
Sbjct: 262 KPDDGISPERAAQVMGPPDRCQHAAHVISELILTAQERDGFGGLAVARGRGRGRGDWSVG 321
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSEC-- 532
+ G VP+ K G ++G+GG I + +++ GA V+LQ P S++
Sbjct: 322 TPGGIQEVTYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPSTDPNL 374
Query: 533 -IVDIRG------SSEHLISAHGTYQSFMTS---GQSMKVQP--SSYQNINPQQSS 576
I IRG + HLI S GQS QP + +QN P +SS
Sbjct: 375 RIFTIRGLPPQIEVARHLIDEKVGGTSIGAPGPFGQSPFSQPPAAPHQNTFPPRSS 430
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q + G N G + A + + +G +IG+GG + ++Q
Sbjct: 20 PSVYGYGVQKRPLDDGVGNQL--GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQA 77
Query: 426 ETGASIHVEDAPTDSDER--VIRAS--AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
E+G I + + ER V+ + + E Q +D ++ T+
Sbjct: 78 ESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTV- 136
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ +P+SKVG ++G+GG I +++ RT + ++
Sbjct: 137 QEIPIPASKVGLVIGKGGETIKQLQERTGVKMVMI 171
>gi|348581993|ref|XP_003476761.1| PREDICTED: poly(rC)-binding protein 4 isoform 1 [Cavia porcellus]
Length = 403
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 34/190 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGSVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRK 318
++ ++P K
Sbjct: 167 CAVILESPPK 176
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 76/174 (43%), Gaps = 28/174 (16%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYSSPTKIAKTQ 188
R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + + P I
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 189 NKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGGMASDD----------- 233
+ E+ + P + LL + + +G + +
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHA 223
Query: 234 ------------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
D T + LVPN+++GC++G++G I +R +GA+I++
Sbjct: 224 VPFASPSVVPGLDPAAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|293331673|ref|NP_001170496.1| uncharacterized protein LOC100384498 [Zea mays]
gi|238005660|gb|ACR33865.1| unknown [Zea mays]
Length = 239
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 90/204 (44%), Gaps = 16/204 (7%)
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
RLLVPN ++GCL+G+ G ++ +R +T ANI + D+ P A ++DE+V++SG+ + +
Sbjct: 4 RLLVPNKVIGCLIGRGGSIVNDMRKKTKANILISKGDK-PRRASSSDELVEVSGEADKLR 62
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNF--------HSPPAPMADMH-----PLGN 349
AL ++ L + K+ S G S P P H PLG
Sbjct: 63 DALVQIILRLREAVLKESVESQNSDRDGQLTVAASDSLYGSSLPLPALLPHNQQIAPLGY 122
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+L P T G Q + G G + S E M + S I
Sbjct: 123 DRRGEPERALEVFPRTSSYGYSSMQVTDDGYGGLPSYASKAYEEHVPRLEMTVPASG--I 180
Query: 410 GGVIGKGGFNVKQLQQETGASIHV 433
V+GK G N+ +++ +GA I +
Sbjct: 181 SKVMGKHGTNLDNIRKISGAHIEI 204
Score = 48.9 bits (115), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 5/68 (7%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDP-HPGSSECIVDIRG 538
+ RLLVP+ +GC++G+GG ++N+MR++T+A+I + K P SS+ +V++ G
Sbjct: 1 MNLRLLVPNKVIGCLIGRGGSIVNDMRKKTKANILI----SKGDKPRRASSSDELVEVSG 56
Query: 539 SSEHLISA 546
++ L A
Sbjct: 57 EADKLRDA 64
>gi|336465527|gb|EGO53767.1| hypothetical protein NEUTE1DRAFT_119308 [Neurospora tetrasperma
FGSC 2508]
gi|350295174|gb|EGZ76151.1| eukaryotic type KH-domain (KH-domain type I) [Neurospora
tetrasperma FGSC 2509]
Length = 481
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 150/386 (38%), Gaps = 82/386 (21%)
Query: 115 SREQSFGNSQPADTV----YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS 170
SR Q ++QP D R + S + +IGK G V +RE + AK TV+D G+
Sbjct: 108 SRAQPPVSAQPHDETAWIHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVSDYQKGA 167
Query: 171 EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMA 230
ER++ + DA+ K II +A
Sbjct: 168 VERILTV-----------------------------SGVVDAVAKAFGLIIRTLNNEPLA 198
Query: 231 SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE 290
+ + T RLL+P+ ++G ++GK G I+ ++ +GA R+ +D P ++T+
Sbjct: 199 EPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA--RLNASDSCLP--LSTER 254
Query: 291 MVQISGKPNVAKRALYEV-STLLHQ-NPRKDKPPSSFPQAYGGQNFHSPPA--------P 340
+ + G + A Y V STLL Q N R P +S G S P P
Sbjct: 255 SLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAYATRSGGPAASIPGGLQVVPYVP 314
Query: 341 MADMHPLGNSSWPARN-----SSLHGMPSTPWMGGYG----DQPS--------------- 376
GN + RN S HGMP + + YG QP+
Sbjct: 315 QPAGGNFGNRDYYQRNRGPDPRSHHGMPPSQYPAPYGAPHPAQPNPAVPMHYGAHAAGGY 374
Query: 377 ---------RMGSGSINSCPPGQMGE--VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
+G G G A + +I +G +IGKGG + +++Q
Sbjct: 375 GAAAPHVAPHVGHAGPAPHAAGPHGAPVAGAALTQQIYIPNDMVGAIIGKGGQKINEIRQ 434
Query: 426 ETGASIHVEDAPTDSDERVIRASAFE 451
+G+ I + + +S+ER++ + E
Sbjct: 435 ISGSVIKINEPQDNSNERLVTITGTE 460
Score = 45.4 bits (106), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
+A ++ + S+ + +IGKGG NV ++++ + A V D + ER++ S G+
Sbjct: 122 TAWIHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVS---GVV 178
Query: 455 NPRSQTIDAILQLQNK----TSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
+ ++ I++ N + T RLL+P +G I+G+GG I E++ +
Sbjct: 179 DAVAKAFGLIIRTLNNEPLAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEAS- 237
Query: 511 ADIRVVGARVKLQD 524
GAR+ D
Sbjct: 238 ------GARLNASD 245
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
+T ++ +P+ VG I+G+GG INE+R ++ G+ +K+ +P S+E +V I G
Sbjct: 406 ALTQQIYIPNDMVGAIIGKGGQKINEIR-------QISGSVIKINEPQDNSNERLVTITG 458
Query: 539 SSE 541
+ E
Sbjct: 459 TEE 461
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 11/84 (13%)
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV-LPADRLPPCAMNTDEMVQISG 296
+ +T ++ +PN+MVG ++GK G I +R +G+ I++ P D + + +V I+G
Sbjct: 405 AALTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDN------SNERLVTITG 458
Query: 297 KPNVAKRALYEVSTLLHQNPRKDK 320
+ ALY LL+Q +K
Sbjct: 459 TEECNRMALY----LLYQRLESEK 478
>gi|223949173|gb|ACN28670.1| unknown [Zea mays]
gi|238010644|gb|ACR36357.1| unknown [Zea mays]
gi|413924015|gb|AFW63947.1| transcribed sequence 1087 protein [Zea mays]
Length = 344
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 136/324 (41%), Gaps = 61/324 (18%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIII 177
G+ + T R L + G +IGK G+ + + ++ A+I ++ + PG+ +R+I++
Sbjct: 34 GDDKEKPTHLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMV 93
Query: 178 YSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNEN 237
D ++K + I+E+ L G ++
Sbjct: 94 -----------------------------SGLFDEVMKAMELILEKLLAEGEEFNEAEAR 124
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG- 296
+ RL+VPN+ G ++GK G I+ E+ A I++ P D D +V I+G
Sbjct: 125 PKV--RLVVPNSSCGGIIGKGGATIKSFIEESHAGIKISPQDN--NYVGLHDRLVTITGT 180
Query: 297 ---KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHS-PPAPMADMHPLGNSSW 352
+ N L ++S +H P P FP Y G F S P P+ M P
Sbjct: 181 FDNQMNAIDLILKKLSEDVHYPPNLSSP---FP--YAGLTFPSYPGVPVGYMIP----QV 231
Query: 353 PARNSSLHGMPSTPWMGGY-GDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGG 411
P N+ +G P+ + G Y ++P + P A+ S+ I + IG
Sbjct: 232 PYSNAVNYG-PNNGYGGRYQNNKP---------TTPMRSPASNEAQESLTIGIADEHIGA 281
Query: 412 VIGKGGFNVKQLQQETGASIHVED 435
V+G+ G N+ ++ Q +GA I + D
Sbjct: 282 VVGRAGRNITEIIQASGARIKISD 305
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 8/121 (6%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPT---DSDERVIRASAFEGLWNP 456
++ L S G +IGKGG + Q ++GA I + + +++R+I S GL++
Sbjct: 43 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSNEFFPGTNDRIIMVS---GLFDE 99
Query: 457 RSQTIDAILQ-LQNKTSEFSE-KGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ ++ IL+ L + EF+E + RL+VP+S G I+G+GG I + A I+
Sbjct: 100 VMKAMELILEKLLAEGEEFNEAEARPKVRLVVPNSSCGGIIGKGGATIKSFIEESHAGIK 159
Query: 515 V 515
+
Sbjct: 160 I 160
>gi|126336339|ref|XP_001367908.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Monodelphis
domestica]
Length = 410
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 78/315 (24%), Positives = 132/315 (41%), Gaps = 48/315 (15%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R++ +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMIMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTGAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL G + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCTGPPNGGSISKPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWM 368
++ ++P K P G S + G + PA S L +
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGTVT-PAEVSKLQQL------ 219
Query: 369 GGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETG 428
P S S+ PG + + S + L IG VIG+ G + +++Q +G
Sbjct: 220 ---SGHPVPFASPSVV---PG-LDPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSG 272
Query: 429 ASIHVEDAPTDSDER 443
A I + + S ER
Sbjct: 273 AHIKIGNQAEGSGER 287
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/181 (24%), Positives = 81/181 (44%), Gaps = 29/181 (16%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYSSP 181
S+P T+ R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + + P
Sbjct: 98 SKPPVTL-RLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVP 156
Query: 182 TKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGGMASDD---- 233
I + E+ + P + LL + + +G + +
Sbjct: 157 DAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGTVTPAEVSKL 216
Query: 234 -------------------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIR 274
D T + LVPN+++GC++G++G I +R +GA+I+
Sbjct: 217 QQLSGHPVPFASPSVVPGLDPSAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIK 276
Query: 275 V 275
+
Sbjct: 277 I 277
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG 452
E+S +++++ ++G +IGK G VK++++++ A I + + ER+ + G
Sbjct: 13 ELSITLTLRMIMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTG 70
Query: 453 -LWNPRSQT---IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+++ S +D L K +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 131 TGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|212275119|ref|NP_001130556.1| uncharacterized protein LOC100191655 [Zea mays]
gi|194689470|gb|ACF78819.1| unknown [Zea mays]
gi|223943199|gb|ACN25683.1| unknown [Zea mays]
gi|413936736|gb|AFW71287.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
gi|413936737|gb|AFW71288.1| hypothetical protein ZEAMMB73_610626 [Zea mays]
Length = 690
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/243 (26%), Positives = 113/243 (46%), Gaps = 43/243 (17%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPG 169
+S+ + S+G Q T +I P+ ++G +IGKAG ++ ++ ++ AKI V + PG
Sbjct: 129 SSAPQYSYGGHQ--GTSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPG 186
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG-- 227
+ R + + +P +I+K + L+K +I E G
Sbjct: 187 ALTRQVELSGNPEQISKAEQ-----------------------LIK---EVIAEADAGSS 220
Query: 228 GMASDDDNENS----TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP 283
G S N+ T ++ + NN VG ++GK G+ I+ +++++GA I+V+P LP
Sbjct: 221 GAVSGGRKYNAPQPGAETFQMKIANNKVGLIIGKGGETIKSMQAKSGARIQVIPL-HLPA 279
Query: 284 CAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMAD 343
+T+ V I G + A V+ + +N R P S Y Q +H PP P ++
Sbjct: 280 GDTSTERTVHIDGTQEQIEHAKQLVAEVTSEN-RARNPMSG---GYSQQGYH-PPRPQSN 334
Query: 344 MHP 346
P
Sbjct: 335 WGP 337
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 74/158 (46%), Gaps = 16/158 (10%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERVIRASAFEGLWN 455
S KI G++G +IGK G ++ +Q ++GA I V +A + R + S +
Sbjct: 143 SKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRQVELSGNPEQIS 202
Query: 456 PRSQTIDAILQLQNKTSEFS----------EKGTITTRLLVPSSKVGCILGQGGHVINEM 505
Q I ++ + S + + G T ++ + ++KVG I+G+GG I M
Sbjct: 203 KAEQLIKEVIAEADAGSSGAVSGGRKYNAPQPGAETFQMKIANNKVGLIIGKGGETIKSM 262
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+ ++ A I+V+ + D S+E V I G+ E +
Sbjct: 263 QAKSGARIQVIPLHLPAGDT---STERTVHIDGTQEQI 297
>gi|444517721|gb|ELV11739.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Tupaia
chinensis]
Length = 552
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 150/393 (38%), Gaps = 87/393 (22%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPT 182
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S+P
Sbjct: 192 QQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTP- 250
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
E +A +L++ + + D +
Sbjct: 251 ---------------------EGCSSACKMILEIMHK----------EAKDTKTADEVPL 279
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIENCC 337
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
RA E+ + + D S Q+ P +A + SS
Sbjct: 338 RAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPSSVT 391
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+ P+ S P +M +++ A +G +IGK G ++KQ
Sbjct: 392 GAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQHIKQ 430
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITT 482
L + ASI + R+ E + P+ E+ + T
Sbjct: 431 LSRFASASIKAQG-------RIYGKLKEENFFGPK------------------EEVKLET 465
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ VP+S G ++G+GG +NE++ T A++ V
Sbjct: 466 HIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 498
>gi|426227473|ref|XP_004007842.1| PREDICTED: insulin-like growth factor 2 mRNA-binding protein 3
isoform 2 [Ovis aries]
Length = 441
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/281 (23%), Positives = 119/281 (42%), Gaps = 38/281 (13%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
I ++L NN VG L+GK G ++++ +T I + P L N + + + G
Sbjct: 138 IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPERTITVKGNVE 195
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
+A E+ + + S+ N + P +++ LG +P +
Sbjct: 196 TCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG--LFPPTS--- 241
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
GMP P G S + P Q + S ++ + A +G +IGK G +
Sbjct: 242 -GMP-----------PPTSGPPSAMTPPYPQFEQQSETETVHLFIPALSVGAIIGKQGQH 289
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + GASI + AP ++ + +R G P A ++ K E +
Sbjct: 290 IKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYGKIKEENFVSP 344
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 345 KEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 385
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 85/200 (42%), Gaps = 39/200 (19%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT-IPGSEERVIIIY 178
F +TV+ + P+ +G +IGK G +K L A I +A P ++ R++II
Sbjct: 261 FEQQSETETVH-LFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEAPDAKVRMVIIT 319
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
P K Q + ++ +I EE+ E
Sbjct: 320 GPPEAQFKAQGR-------------------------IYGKIKEENFVS------PKEEV 348
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-- 296
+ A + VP+ G ++GK G + L++ + A + V+P D+ P N +V+I+G
Sbjct: 349 KLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEV-VVPRDQTP--DENDQVVVKITGHF 405
Query: 297 -KPNVAKRALYEVSTLLHQN 315
VA+R + E+ T + Q+
Sbjct: 406 YACQVAQRKIQEILTQVKQH 425
>gi|344271275|ref|XP_003407465.1| PREDICTED: LOW QUALITY PROTEIN: far upstream element-binding
protein 3-like [Loxodonta africana]
Length = 625
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/323 (22%), Positives = 134/323 (41%), Gaps = 85/323 (26%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKIA 185
T+ IL P+ K+G VIGK G +K L+E T K+ + +P ++ + I P K+
Sbjct: 163 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPXGADKPLRITGDPFKVQ 222
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
+ A++ +L++ + D F G+ SD + + +
Sbjct: 223 Q----------------------AREMVLEIIREKDQAD-FRGVRSDFSSRMGGGSIEVS 259
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P+ + A
Sbjct: 260 VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMGPPDRCQHAA 314
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST 365
+ ++ L+ +D +GG + +A G W
Sbjct: 315 HFINELILTAQERD--------GFGGLS-------VARGRGRGRGDW------------- 346
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
S+ + PG + E++ A K G VIGKGG N+K + Q
Sbjct: 347 ----------------SVGT--PGGVQEIT------YTVPADKCGLVIGKGGENIKSINQ 382
Query: 426 ETGASIHVEDAP---TDSDERVI 445
++GA + ++ P TD + R+
Sbjct: 383 QSGAHVELQRNPPPNTDPNLRIF 405
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 181/479 (37%), Gaps = 140/479 (29%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTP------------ 131
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR F +D + NSTI +L+P + VG
Sbjct: 132 -------ESIE---QAKRLLGQIVDRCRNGPGF----HNDIDGNSTIQ-EILIPASKVGL 176
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G P ++A V ++
Sbjct: 177 VIGKGGETIKQLQERTGVKMVMIQDGPLPXGA---DKPLRITGDPFKVQQAREMVLEIIR 233
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G D
Sbjct: 234 EKDQAD-----------------------------------------------FRGVRSD 246
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SRMG GSI P F++ I VIG+ G +K++Q + G I
Sbjct: 247 FSSRMGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 289
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF------------------- 474
+ S ER + + I+ ++ + F
Sbjct: 290 KPDDGISPERAAQVMGPPDRCQHAAHFINELILTAQERDGFGGLSVARGRGRGRGDWSVG 349
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSEC-- 532
+ G VP+ K G ++G+GG I + +++ GA V+LQ P +++
Sbjct: 350 TPGGVQEITYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPNTDPNL 402
Query: 533 -IVDIRG------SSEHLI------SAHGTYQSFMTSGQSMKVQP--SSYQNINPQQSS 576
I IRG + HLI ++ G +F GQS QP + +QN P +SS
Sbjct: 403 RIFTIRGVPQQIEVARHLIDEKVGGASLGAPGAF---GQSPFSQPPAAPHQNTFPPRSS 458
Score = 46.2 bits (108), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q + G N G + A + + +G +IG+GG + ++Q
Sbjct: 48 PSVYGYGVQKRPLDDGVGNQL--GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQA 105
Query: 426 ETGASIHVEDAPTDSDER--VIRAS--AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
E+G I + + ER V+ + + E Q +D ++ TI
Sbjct: 106 ESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTI- 164
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+L+P+SKVG ++G+GG I +++ RT + ++
Sbjct: 165 QEILIPASKVGLVIGKGGETIKQLQERTGVKMVMI 199
>gi|85111179|ref|XP_963814.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|28925551|gb|EAA34578.1| hypothetical protein NCU09237 [Neurospora crassa OR74A]
gi|38566984|emb|CAE76284.1| related to hnRNP protein E2 [Neurospora crassa]
Length = 489
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 93/386 (24%), Positives = 150/386 (38%), Gaps = 82/386 (21%)
Query: 115 SREQSFGNSQPADTV----YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS 170
SR Q ++QP D R + S + +IGK G V +RE + AK TV+D G+
Sbjct: 108 SRAQPPVSAQPHDETAWIHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVSDYQKGA 167
Query: 171 EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMA 230
ER++ + DA+ K II +A
Sbjct: 168 VERILTV-----------------------------SGVVDAVAKAFGLIIRTLNNEPLA 198
Query: 231 SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE 290
+ + T RLL+P+ ++G ++GK G I+ ++ +GA R+ +D P ++T+
Sbjct: 199 EPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEASGA--RLNASDSCLP--LSTER 254
Query: 291 MVQISGKPNVAKRALYEV-STLLHQ-NPRKDKPPSSFPQAYGGQNFHSPPA--------P 340
+ + G + A Y V STLL Q N R P +S G S P P
Sbjct: 255 SLVVMGVADAVHIATYYVGSTLLEQLNERFGGPAASAYATRSGGPAASIPGGLQVVPYVP 314
Query: 341 MADMHPLGNSSWPARN-----SSLHGMPSTPWMGGYG----DQPS--------------- 376
GN + RN S HGMP + + YG QP+
Sbjct: 315 QPAGGNFGNRDYYQRNRGPDPRSHHGMPPSQYPAPYGAPHPAQPNPAVPMHYGAHAAGGY 374
Query: 377 ---------RMGSGSINSCPPGQMGE--VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
+G G G A + +I +G +IGKGG + +++Q
Sbjct: 375 GAAAPHVAPHVGHAGPAPHAAGPHGAPVAGAALTQQIYIPNDMVGAIIGKGGQKINEIRQ 434
Query: 426 ETGASIHVEDAPTDSDERVIRASAFE 451
+G+ I + + +S+ER++ + E
Sbjct: 435 ISGSVIKINEPQDNSNERLVTITGTE 460
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 34/134 (25%), Positives = 64/134 (47%), Gaps = 14/134 (10%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
+A ++ + S+ + +IGKGG NV ++++ + A V D + ER++ S G+
Sbjct: 122 TAWIHVRSVISSPEAATIIGKGGENVSKIREMSNAKCTVSDYQKGAVERILTVS---GVV 178
Query: 455 NPRSQTIDAILQLQNK----TSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
+ ++ I++ N + T RLL+P +G I+G+GG I E++ +
Sbjct: 179 DAVAKAFGLIIRTLNNEPLAEPSNTHSKTYPLRLLIPHVLIGSIIGKGGARIKEIQEAS- 237
Query: 511 ADIRVVGARVKLQD 524
GAR+ D
Sbjct: 238 ------GARLNASD 245
Score = 44.3 bits (103), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 7/63 (11%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
+T ++ +P+ VG I+G+GG INE+R ++ G+ +K+ +P S+E +V I G
Sbjct: 406 ALTQQIYIPNDMVGAIIGKGGQKINEIR-------QISGSVIKINEPQDNSNERLVTITG 458
Query: 539 SSE 541
+ E
Sbjct: 459 TEE 461
Score = 40.0 bits (92), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 43/78 (55%), Gaps = 11/78 (14%)
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV-LPADRLPPCAMNTDEMVQISG 296
+ +T ++ +PN+MVG ++GK G I +R +G+ I++ P D + + +V I+G
Sbjct: 405 AALTQQIYIPNDMVGAIIGKGGQKINEIRQISGSVIKINEPQDN------SNERLVTITG 458
Query: 297 KPNVAKRALYEVSTLLHQ 314
+ ALY LL+Q
Sbjct: 459 TEECNRMALY----LLYQ 472
>gi|155372155|ref|NP_001094687.1| far upstream element-binding protein 3 [Bos taurus]
gi|151554191|gb|AAI49199.1| FUBP3 protein [Bos taurus]
gi|296482076|tpg|DAA24191.1| TPA: far upstream element (FUSE) binding protein 3 [Bos taurus]
Length = 572
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/328 (22%), Positives = 132/328 (40%), Gaps = 82/328 (25%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKIA 185
TV I P+ K+G VIGK G +K L+E T K+ + +P ++ + I P K+
Sbjct: 163 TVQEIPIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 222
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
+ A++ +L++ + D F G+ D + + +
Sbjct: 223 Q----------------------AREMVLEIIREKDQAD-FRGVRGDFSSRMGGGSIEVS 259
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P+ + A
Sbjct: 260 VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMGPPDRCQHAA 314
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST 365
+ +S L+ +D +GG +A G W
Sbjct: 315 HVISELILTAQERD--------GFGG-------LAVARGRGRGRGDW------------- 346
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
S+ + PG + EV+ A K G VIGKGG N+K + Q
Sbjct: 347 ----------------SVGT--PGGIQEVT------YTVPADKCGLVIGKGGENIKSINQ 382
Query: 426 ETGASIHVEDAPTDSDERVIRASAFEGL 453
++GA + ++ P S + +R GL
Sbjct: 383 QSGAHVELQRNPPPSTDPNLRIFTIRGL 410
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 105/476 (22%), Positives = 176/476 (36%), Gaps = 134/476 (28%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTP------------ 131
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR F +D + NST+ + +P + VG
Sbjct: 132 -------ESIE---QAKRLLGQIVDRCRNGPGF----HNDVDGNSTVQ-EIPIPASKVGL 176
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G P ++A V ++
Sbjct: 177 VIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIR 233
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G GD
Sbjct: 234 EKDQAD-----------------------------------------------FRGVRGD 246
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SRMG GSI P F++ I VIG+ G +K++Q + G I
Sbjct: 247 FSSRMGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 289
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF------------------- 474
+ S ER + + I ++ + F
Sbjct: 290 KPDDGISPERAAQVMGPPDRCQHAAHVISELILTAQERDGFGGLAVARGRGRGRGDWSVG 349
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSEC-- 532
+ G VP+ K G ++G+GG I + +++ GA V+LQ P S++
Sbjct: 350 TPGGIQEVTYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPSTDPNL 402
Query: 533 -IVDIRG------SSEHLISAHGTYQSFMTS---GQSMKVQP--SSYQNINPQQSS 576
I IRG + HLI S GQS QP + +QN P +SS
Sbjct: 403 RIFTIRGLPPQIEVARHLIDEKVGGTSIGAPGPFGQSPFSQPPAAPHQNTFPPRSS 458
Score = 42.4 bits (98), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 36/155 (23%), Positives = 69/155 (44%), Gaps = 7/155 (4%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q + G N G + A + + +G +IG+GG + ++Q
Sbjct: 48 PSVYGYGVQKRPLDDGVGNQL--GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQA 105
Query: 426 ETGASIHVEDAPTDSDER--VIRAS--AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
E+G I + + ER V+ + + E Q +D ++ T+
Sbjct: 106 ESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTV- 164
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ +P+SKVG ++G+GG I +++ RT + ++
Sbjct: 165 QEIPIPASKVGLVIGKGGETIKQLQERTGVKMVMI 199
>gi|57093423|ref|XP_538537.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Canis lupus
familiaris]
Length = 356
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 86/347 (24%), Positives = 142/347 (40%), Gaps = 72/347 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 161
Query: 308 VSTLLHQN------------PRKDKPPSSFPQAYGGQNFHSPPA--PMADMHPLGNSSWP 353
+ ++ + P + P SS GGQ+ A P A H L P
Sbjct: 162 ICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCGDAAGYPHAT-HDL--EGPP 218
Query: 354 ARNSSLHGMPS-TPWMGGYGDQPSR-----------MGSGSINSCPPGQMG-----EVSA 396
S+ G + +P +Q +R G I+S P G + S
Sbjct: 219 LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDAST 278
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ + ++ IG +IG+ G N+ +++Q +GA I + + S R
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGR 325
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTERAITIAG 150
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSA 333
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 334 ASISLAQYLINARLSSEKGM 353
>gi|146336943|gb|ABQ23585.1| putative KH-domain containing protein [Medicago truncatula]
Length = 334
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 128/320 (40%), Gaps = 74/320 (23%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKI 184
T R L + G VIGK G+ + + ++ A+I ++ + PG+ +R+I++
Sbjct: 36 TYVRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMV------- 88
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT-AR 243
A + +L+ + I+ + L + S+DDN+ T R
Sbjct: 89 ----------------------SGAINEVLRAVELILSK-LLSELHSEDDNDVEPKTKVR 125
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
L+VPN G ++GK G I+ E+ A I++ P D D +V ++G + R
Sbjct: 126 LIVPNGSCGGIIGKGGATIRSFIEESQAGIKISPQDN--SYYGQNDRIVTVTGTLDEQMR 183
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
+ + + L ++P SS P Y G A S G+P
Sbjct: 184 GIDLIVSKLAEDPHYSHSMSS-PFTYSG----------------------AYVSGYQGVP 220
Query: 364 ST--------PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGK 415
T P G +P+ G+ NS + SM I + IG V+G+
Sbjct: 221 YTYVLPSVAPPAYNGVNYRPNGTGAKFQNS-------KEDRSNSMTIGVADEHIGLVVGR 273
Query: 416 GGFNVKQLQQETGASIHVED 435
GG N+ + Q +GA I + D
Sbjct: 274 GGRNISDISQTSGAKIKISD 293
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 4/120 (3%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV----EDAPTDSDERVIRASAFEGLWN 455
++ L S G VIGKGG + Q ++GA I + E P +D ++ + A +
Sbjct: 38 VRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNNEFFPGTTDRIIMVSGAINEVLR 97
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ +L + + + RL+VP+ G I+G+GG I +QA I++
Sbjct: 98 AVELILSKLLSELHSEDDNDVEPKTKVRLIVPNGSCGGIIGKGGATIRSFIEESQAGIKI 157
>gi|116007842|ref|NP_001036619.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
gi|113194920|gb|ABI31266.1| mushroom-body expressed, isoform D [Drosophila melanogaster]
Length = 539
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/349 (23%), Positives = 152/349 (43%), Gaps = 63/349 (18%)
Query: 106 IKKGNWSNSSREQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA 164
++ N S+S+ S + P+ T+ R++ +++G +IGK G IV REE+ AKI ++
Sbjct: 1 MEDNNTSSSAGGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINIS 60
Query: 165 DTIPGS-EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE 223
D GS ER++ + + I SA + E C+ + + KV
Sbjct: 61 D---GSCPERIVTVSGTTNAIF--------SAFTLITKKFEEWCSQFNDVGKVGK----- 104
Query: 224 DLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP 283
+ I RL+VP + G L+GK G I+ +R TG +I+V ++ LP
Sbjct: 105 --------------TQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV-ASEMLPN 149
Query: 284 CAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKD-------KPPSSFP------QAYG 330
+T+ V +SG + +Y++ ++ ++P + KP + P QA+
Sbjct: 150 ---STERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANGQAFT 206
Query: 331 GQNFHSPPAPMADMHPLGNSSWPARN----SSLHGMPSTPWMGGYGDQPSRMGSGSINSC 386
Q ++ P +PL + + +S G+ T + R +
Sbjct: 207 IQGNYAVPTQEVAKNPLASLAALGLAGMNPASTGGINHTAALAALAGSQLRTAN------ 260
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
P + + E ++ S IG +IGKGG + +++Q +GA I + +
Sbjct: 261 PANRAQQQQHEMTV----SNDLIGCIIGKGGTKIAEIRQISGAMIRISN 305
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G V + ++E+GA I++ D ER++ S G
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVS---GTT 75
Query: 455 NPRSQTIDAILQ-LQNKTSEFSEKGT-----ITTRLLVPSSKVGCILGQGGHVINEMRRR 508
N I + + S+F++ G I RL+VP+S+ G ++G+ G I E+R+
Sbjct: 76 NAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQT 135
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
T I+V + P S+E V + GS+E +
Sbjct: 136 TGCSIQVA------SEMLPNSTERAVTLSGSAEQI 164
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
+ V N+++GC++GK G I +R +GA IR+ + NTD + ISG P+
Sbjct: 271 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERE--GGNTDRTITISGNPDSVA 328
Query: 303 RALYEVS 309
A Y ++
Sbjct: 329 LAQYLIN 335
>gi|332019831|gb|EGI60292.1| Poly(rC)-binding protein 3 [Acromyrmex echinatior]
Length = 566
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 28/199 (14%)
Query: 122 NSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYS 179
N P+ T+ R++ +++G +IGK G IVK REE+ AKI ++D GS ER++ +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTG 67
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
I K A + E C+ + HD GG S
Sbjct: 68 PTNSIFK--------AFTLICKKFEEWCS------QFHDVPGSGAGGGGGVSRPP----- 108
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
IT RL+VP + G L+GK G I+ +R TGA+I+V ++ LP +T+ V ISG
Sbjct: 109 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTISGTSE 164
Query: 300 VAKRALYEVSTLLHQNPRK 318
+ +Y + ++ ++P K
Sbjct: 165 AITQCIYHICCVMLESPPK 183
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 31/166 (18%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G VK+ ++E+GA I++ D ER++ +
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG----- 67
Query: 455 NPRSQTIDAILQLQNKTSEFSE-----------------KGTITTRLLVPSSKVGCILGQ 497
P + A + K E+ + IT RL+VP+S+ G ++G+
Sbjct: 68 -PTNSIFKAFTLICKKFEEWCSQFHDVPGSGAGGGGGVSRPPITLRLIVPASQCGSLIGK 126
Query: 498 GGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
GG I E+R T A I+V + P S+E V I G+SE +
Sbjct: 127 GGSKIKEIREVTGASIQVASEML------PNSTERAVTISGTSEAI 166
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + VPN ++GC++GK G I +R +GA IR+ + A TD + I+G P+
Sbjct: 372 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 429
Query: 301 AKRALYEVS 309
A Y ++
Sbjct: 430 VALAQYLIN 438
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 51/98 (52%), Gaps = 8/98 (8%)
Query: 112 SNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP--- 168
+N++R+Q N+Q + + P+ IG +IGK G + +R+ + A I +++
Sbjct: 359 NNTNRQQPAANNQ----THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREG 414
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPH 206
G+ +R I I +P +A Q + S E +K ++E H
Sbjct: 415 GATDRTITITGNPDAVALAQYLINMS-VELQKANLEAH 451
>gi|344245659|gb|EGW01763.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Cricetulus
griseus]
Length = 552
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/393 (20%), Positives = 150/393 (38%), Gaps = 87/393 (22%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPT 182
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S+P
Sbjct: 192 QQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHSTP- 250
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
E +A +L++ + + D +
Sbjct: 251 ---------------------EGCSSACKMILEIMHK----------EAKDTKTADEVPL 279
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIENCC 337
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
RA E+ + + D S Q+ P +A + SS
Sbjct: 338 RAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPSSVT 391
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+ P+ S P +M +++ A +G +IGK G ++KQ
Sbjct: 392 GAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQHIKQ 430
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITT 482
L + ASI + R+ E + P+ E+ + T
Sbjct: 431 LSRFASASIKAQG-------RIYGKLKEENFFGPK------------------EEVKLET 465
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ VP+S G ++G+GG +NE++ T A++ V
Sbjct: 466 HIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 498
>gi|443712210|gb|ELU05631.1| hypothetical protein CAPTEDRAFT_229004 [Capitella teleta]
Length = 679
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 95/446 (21%), Positives = 176/446 (39%), Gaps = 78/446 (17%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKIAKTQN 189
+IL PS +G +IGK G ++++ ++ +++ V G E+VI IY +P
Sbjct: 195 KILVPSDFVGAIIGKGGETIRTITKKCNSRVDVHGKENSGLLEKVISIYGNPENCTS--- 251
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST--ITARLLVP 247
A ++ LL + + ++S + +S I ++L
Sbjct: 252 ------------------ACKEILLVMQNE---------LSSPNRTSSSVQEIVLKILAD 284
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVL-PADRL----------PPCAMNTDEMVQISG 296
N G ++G+ G VI+++R +T I V +D L +M + ++ + G
Sbjct: 285 NRYCGRVIGREGRVIKKIREDTQTKITVSNDSDHLLELGHGHGLQDVASMFPERVISVRG 344
Query: 297 KPNVAKRALYEVSTLLHQNPRKD-KPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPAR 355
+ A +ST+L + KD P P+ + P M + + +
Sbjct: 345 DIDHMSEAEGAISTILRECAEKDMHQPQLDPR------MMAMPGAMGGLPMMQGAGAGGI 398
Query: 356 NSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGK 415
G MG PP G S + +I +G +IG
Sbjct: 399 YPGGGPGFYPGMYPGVQQGHQDMG------FPPSS-GSNSPTETCQICVPNSAVGALIGA 451
Query: 416 GGFNVKQLQQETGASIHVE----DAPTDSDERVIRASAF-EGLWNPRSQTIDAILQLQNK 470
G N+KQ+ +++ A + +E D P + ER++ + +W + + K
Sbjct: 452 AGSNIKQIIRDSQAFVTIEPKKDDDPNPASERIVSIKGTQDSIWRASYYVFEKL-----K 506
Query: 471 TSEFSEKGTITTR--LLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKL-QDPHP 527
+ FS + R + VP VG ++G+GG + E++R T GA +KL +D
Sbjct: 507 SEGFSGNDDVRLRTAIRVPQKAVGFVIGKGGKNVREVQRMT-------GAIIKLPEDQTV 559
Query: 528 GSSECIVDIRGSSEHLISAHGTYQSF 553
E +V+ G+ + SAH ++
Sbjct: 560 QGDEVVVEAYGTFMSVHSAHSRIRAL 585
Score = 52.0 bits (123), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 78/171 (45%), Gaps = 16/171 (9%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS-DERVIRASAFEGLWNP 456
+++KIL + +G +IGKGG ++ + ++ + + V E+VI S + N
Sbjct: 192 YALKILVPSDFVGAIIGKGGETIRTITKKCNSRVDVHGKENSGLLEKVI--SIYGNPENC 249
Query: 457 RSQTIDAILQLQNKTSE----FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
S + +L +QN+ S S I ++L + G ++G+ G VI ++R TQ
Sbjct: 250 TSACKEILLVMQNELSSPNRTSSSVQEIVLKILADNRYCGRVIGREGRVIKKIREDTQTK 309
Query: 513 IRV---------VGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFM 554
I V +G LQD E ++ +RG +H+ A G + +
Sbjct: 310 ITVSNDSDHLLELGHGHGLQDVASMFPERVISVRGDIDHMSEAEGAISTIL 360
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 28/39 (71%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVAD 165
+ V +IL +R G VIG+ G ++K +RE+TQ KITV++
Sbjct: 276 EIVLKILADNRYCGRVIGREGRVIKKIREDTQTKITVSN 314
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 34/174 (19%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIY 178
S G++ P +T +I P+ +G +IG AG+ +K + ++QA +T+
Sbjct: 426 SSGSNSPTETC-QICVPNSAVGALIGAAGSNIKQIIRDSQAFVTI--------------- 469
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
P K DD + A + S++ QD++ + + E+ G + +DD
Sbjct: 470 -EPKK------DDDPNPASERIVSIK---GTQDSIWRASYYVFEKLKSEGFSGNDD---V 516
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
+ + VP VG ++GK G ++ ++ TGA I+ LP D+ + DE+V
Sbjct: 517 RLRTAIRVPQKAVGFVIGKGGKNVREVQRMTGAIIK-LPEDQ----TVQGDEVV 565
>gi|405976740|gb|EKC41236.1| Insulin-like growth factor 2 mRNA-binding protein 1 [Crassostrea
gigas]
Length = 416
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 105/477 (22%), Positives = 182/477 (38%), Gaps = 113/477 (23%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSP---TKIAKTQ 188
IL S +G +IGK G + ++ E++A++ + S + ++ I SP +K K
Sbjct: 12 ILVGSEYVGAIIGKQGQTIHNITSESRARVDIHRRDGLSTDTLVTIKGSPENCSKACKEI 71
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
K +S A++ + P +++ PN
Sbjct: 72 MKIVESEAQSLNKGEPP------------------------------------LKIICPN 95
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
++ G ++GK+G+VI+ +TG +I V A + D ++ I+G P +A V
Sbjct: 96 SLCGRIIGKQGNVIKSFMEQTGTHIVVSSATDMN--NFFVDRVITITGSPENTSKAEALV 153
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH----GMPS 364
S + + +D QN+++ M G + G P
Sbjct: 154 SEKMRKCFEQD-----------AQNYNT------QMGMFGGMPPMPNMMPPYNFQRGPPY 196
Query: 365 TPW-MGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
P+ M G G + G PP Q EV+ + +G IG G N+K++
Sbjct: 197 PPYQMQGDGFYYGQGG-------PPQQDLEVTY-----LYIPESTVGACIGSKGSNIKEI 244
Query: 424 QQETGASIHVED------------------APTDSDERVIRASAFEGLWNPRSQTIDAIL 465
+ +GA I +E+ P + +VI E W + D I
Sbjct: 245 MRLSGARIKIENPQMQSGKNGDMNGDRKGPTPPLEERKVIITGTAEAQWKAQFYVFDKI- 303
Query: 466 QLQNKTS---EFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKL 522
KT + E+ + + +LVP S +G I+G+GG + EM+R + A ++V +
Sbjct: 304 ----KTEGGFQRIEEVHLRSEVLVPRSMIGRIIGKGGQNVREMQRVSGAIVKVPDQNSQT 359
Query: 523 QDPHPGSSECIVDIRGSSEHLISAHGTYQSF----------MTSGQSMKVQPSSYQN 569
Q G E V I G + A +S + GQ ++QP + QN
Sbjct: 360 QS--DGDMEVAVSIIGHFYAMQPAIRRIRSLVNPRPQQGPVLMPGQQRRLQPRTQQN 414
Score = 44.7 bits (104), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 48/195 (24%), Positives = 76/195 (38%), Gaps = 51/195 (26%)
Query: 115 SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE--- 171
S QS +P +I+CP+ G +IGK GN++KS E+T I V+ +
Sbjct: 77 SEAQSLNKGEPP---LKIICPNSLCGRIIGKQGNVIKSFMEQTGTHIVVSSATDMNNFFV 133
Query: 172 ERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG--- 228
+RVI I SP ++ S AE C QDA + + +FGG
Sbjct: 134 DRVITITGSP---------ENTSKAEALVSEKMRKCFEQDA----QNYNTQMGMFGGMPP 180
Query: 229 --------------------MASDD--------DNENSTITARLLVPNNMVGCLLGKRGD 260
M D ++ +T L +P + VG +G +G
Sbjct: 181 MPNMMPPYNFQRGPPYPPYQMQGDGFYYGQGGPPQQDLEVTY-LYIPESTVGACIGSKGS 239
Query: 261 VIQRLRSETGANIRV 275
I+ + +GA I++
Sbjct: 240 NIKEIMRLSGARIKI 254
>gi|169775165|ref|XP_001822050.1| RNA-binding protein rnc1 [Aspergillus oryzae RIB40]
gi|238496215|ref|XP_002379343.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|83769913|dbj|BAE60048.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220694223|gb|EED50567.1| KH domain RNA-binding protein [Aspergillus flavus NRRL3357]
gi|391872927|gb|EIT82002.1| polyC-binding proteins alphaCP-1 [Aspergillus oryzae 3.042]
Length = 357
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 75/315 (23%), Positives = 139/315 (44%), Gaps = 38/315 (12%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ +PG +RV+ + A+
Sbjct: 46 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTARA--- 102
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ LL+ ++ GG+ S+ N T RLL+ +N
Sbjct: 103 ---------------YALVAKGLLEGAPQM----GMGGVVSN----NGTHPVRLLISHNQ 139
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G+ G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 140 MGTIIGRSGLKIKHIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAVWEIGK 195
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGG 370
L + ++ + A AP+ G SS P N + +G + GG
Sbjct: 196 CLIDDWQRGTGTILYNPAV---RASVGTAPVNQNVGNGYSSRP-YNRTGNGADFSDQSGG 251
Query: 371 YGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGAS 430
YG R + N P + + I A +G +IG+ G + ++++ +GA
Sbjct: 252 YG---RRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRAGSKITEIRRSSGAR 308
Query: 431 IHVEDAP-TDSDERV 444
I + AP D+ ER+
Sbjct: 309 ISIAKAPHDDTGERM 323
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 42/178 (23%), Positives = 81/178 (45%), Gaps = 10/178 (5%)
Query: 373 DQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIH 432
D + + G ++ P + + +++ + S+ + G +IGK G NV L+ ETG
Sbjct: 18 DAVNMVDEGDMDITPKTEEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAG 77
Query: 433 VEDAPTDSDERVIRASA-FEGLWNPRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPS 488
V +RV+ + +G + +L+ S GT RLL+
Sbjct: 78 VSKVVPGVHDRVLTVTGPLQGTARAYALVAKGLLEGAPQMGMGGVVSNNGTHPVRLLISH 137
Query: 489 SKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
+++G I+G+ G I + + + +R+V + L P S+E IV+++G+ E + A
Sbjct: 138 NQMGTIIGRSGLKIKHI--QDASGVRMVAQKEML----PQSTERIVEVQGTPEGIEKA 189
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P +MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 277 TQNISIPADMVGCIIGRAGSKITEIRRSSGARISIAKA----PHDDTGERMFTIMGSAQA 332
Query: 301 AKRALYEVSTLLHQNPRKDKP-PSSFPQ 327
++ALY LL++N +K S PQ
Sbjct: 333 NEKALY----LLYENLEAEKTRRSQLPQ 356
>gi|145238284|ref|XP_001391789.1| RNA-binding protein rnc1 [Aspergillus niger CBS 513.88]
gi|134076273|emb|CAL00757.1| unnamed protein product [Aspergillus niger]
gi|350635790|gb|EHA24151.1| hypothetical protein ASPNIDRAFT_209528 [Aspergillus niger ATCC
1015]
Length = 360
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 137/310 (44%), Gaps = 35/310 (11%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGK+G V LR+ET K V+ +PG +RV+ + A+
Sbjct: 46 RAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLNGTARA--- 102
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ LL+ ++ GG+ S+ N T RLL+ +N
Sbjct: 103 ---------------YALVAKGLLEGAPQM----GMGGIVSN----NGTHPVRLLISHNQ 139
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 140 MGTIIGRQGLKIKHIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAVWEIGK 195
Query: 311 LLHQNPRKDKPPSSF-PQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMG 369
L + ++ + P + + M G +S P N + +G + G
Sbjct: 196 CLIDDWQRGTGTILYNPAVRASVGTTTSTSTMNQSVGNGYNSRPY-NRTGNGADFSDQSG 254
Query: 370 GYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGA 429
GYG R + N P + + I A +G +IG+GG + ++++ +GA
Sbjct: 255 GYG---RRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGSKITEIRRSSGA 311
Query: 430 SIHVEDAPTD 439
I + AP D
Sbjct: 312 RISIAKAPHD 321
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 10/168 (5%)
Query: 383 INSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDE 442
I + P + + +++ + S+ + G +IGK G NV L+ ETG V +
Sbjct: 28 IETTPKTEEEYAQSMLTLRAIVSSKEAGIIIGKSGKNVADLRDETGVKAGVSKVVPGVHD 87
Query: 443 RVIRASA-FEGLWNPRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQG 498
RV+ + G + +L+ S GT RLL+ +++G I+G+
Sbjct: 88 RVLTVTGPLNGTARAYALVAKGLLEGAPQMGMGGIVSNNGTHPVRLLISHNQMGTIIGRQ 147
Query: 499 GHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
G I + + + +R+V + L P S+E IV+++G+ E + A
Sbjct: 148 GLKIKHI--QDASGVRMVAQKEML----PQSTERIVEVQGTPEGIEKA 189
Score = 42.4 bits (98), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 8/87 (9%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P +MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 281 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKA----PHDETGERMFTIMGSAQA 336
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQ 327
++ALY LL++N +K S Q
Sbjct: 337 NEKALY----LLYENLEAEKTRRSQLQ 359
Score = 40.4 bits (93), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +P+ VGCI+G+GG I E+RR + A I + A PH + E + I GS+
Sbjct: 281 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKA------PHDETGERMFTIMGSA 334
Query: 541 E 541
+
Sbjct: 335 Q 335
>gi|189238821|ref|XP_968538.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein k
[Tribolium castaneum]
gi|270010156|gb|EFA06604.1| hypothetical protein TcasGA2_TC009519 [Tribolium castaneum]
Length = 414
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 91/196 (46%), Gaps = 39/196 (19%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPT 182
S+ D R+L PS+ G +IGK G + LR + +A ITV D PG E R++ + S
Sbjct: 16 SRRGDEEVRLLIPSKVAGSIIGKGGQNITKLRSQYKASITVPD-CPGPE-RMLTLSSDLD 73
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
I V D + + GG + ++ +
Sbjct: 74 TICNI----------------------------VTDVVPNLEENGGRVNGNE-----LDL 100
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
R+++ + GC++GK G I+ LR +TGA I++ ++ P +TD ++QI G+P+
Sbjct: 101 RMMIHQSQAGCVIGKAGYKIKELREKTGARIKIF-SNVAP---QSTDRIIQIVGEPSKCV 156
Query: 303 RALYEVSTLLHQNPRK 318
++ E+ TL+ NP K
Sbjct: 157 DSIREIITLIKSNPIK 172
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 77/153 (50%), Gaps = 15/153 (9%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLW 454
+ +++L + G +IGKGG N+ +L+ + ASI V D P ER++ S+ + +
Sbjct: 19 GDEEVRLLIPSKVAGSIIGKGGQNITKLRSQYKASITVPDCP--GPERMLTLSSDLDTIC 76
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
N D + L+ + + R+++ S+ GC++G+ G+ I E+R +T
Sbjct: 77 N---IVTDVVPNLEENGGRVNGN-ELDLRMMIHQSQAGCVIGKAGYKIKELREKT----- 127
Query: 515 VVGARVKL-QDPHPGSSECIVDIRGSSEHLISA 546
GAR+K+ + P S++ I+ I G + +
Sbjct: 128 --GARIKIFSNVAPQSTDRIIQIVGEPSKCVDS 158
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVI 175
E++ G + R++ + G VIGKAG +K LRE+T A+I + ++ P S +R+I
Sbjct: 87 EENGGRVNGNELDLRMMIHQSQAGCVIGKAGYKIKELREKTGARIKIFSNVAPQSTDRII 146
Query: 176 IIYSSPTK 183
I P+K
Sbjct: 147 QIVGEPSK 154
>gi|324518489|gb|ADY47116.1| Heterogeneous nuclear ribonucleoprotein K [Ascaris suum]
gi|324519835|gb|ADY47493.1| Heterogeneous nuclear ribonucleoprotein K, partial [Ascaris suum]
Length = 361
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 90/331 (27%), Positives = 138/331 (41%), Gaps = 64/331 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L PSR G VIGK G +K LR E A +T+ D+ + ER++ I + + + N+
Sbjct: 41 RLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDS--QTPERIVTIVAEIDNVIRCVNE 98
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ P D LK D + D+ + RLLV +
Sbjct: 99 ------------IIPRL---DECLKTRD-----------SDDEGSARGESELRLLVHQSH 132
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
G ++G+ G I+ LR ET ++V C +T+ ++QI G P + +
Sbjct: 133 AGAIIGRGGYRIKELREETSTQLKVYSQC----CPQSTERVIQIIGVPEKIIACVILIIN 188
Query: 311 LLHQNPRK--DKPPSS------FPQAYGG----QNFHSPPAPMADMHPLGNSSWPARNSS 358
+L + P K +P S F YGG +N+ M + P R
Sbjct: 189 MLKEIPIKGPSRPYESMFYDPNFVHEYGGFPPDRNYRG----MGPRGGMYGGGLPPR--- 241
Query: 359 LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
P P+ GG G MG G ++ PP G + I G G +IGKGG
Sbjct: 242 ---APRFPY-GGRG-----MGMG-VSPFPPAPFGGPMQTTQVTIPNELG--GTIIGKGGE 289
Query: 419 NVKQLQQETGASIHVEDAPTDSDERVIRASA 449
+ ++++E+GA I VE +S ER+I S
Sbjct: 290 RINRIREESGAHIVVEPQQPNS-ERIITISG 319
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 81/155 (52%), Gaps = 12/155 (7%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGL 453
+ ++ +++L + G VIGKGG ++K+L+ E A++ + D+ T ER++ A + +
Sbjct: 35 AGKYELRLLVPSRGAGAVIGKGGESIKRLRAECDATLTIPDSQTP--ERIVTIVAEIDNV 92
Query: 454 WNPRSQTI---DAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
++ I D L+ ++ E S +G RLLV S G I+G+GG+ I E+R T
Sbjct: 93 IRCVNEIIPRLDECLKTRDSDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELREETS 152
Query: 511 ADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLIS 545
++V P S+E ++ I G E +I+
Sbjct: 153 TQLKV------YSQCCPQSTERVIQIIGVPEKIIA 181
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 48/87 (55%), Gaps = 8/87 (9%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T ++ +PN + G ++GK G+ I R+R E+GA+I V P N++ ++ ISG
Sbjct: 270 TTQVTIPNELGGTIIGKGGERINRIREESGAHIVVEPQQ------PNSERIITISGSHAQ 323
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSFPQ 327
+ A Y + + + P +K P++ P+
Sbjct: 324 IQTAQYLLQQWIVRFP--NKYPAAQPR 348
Score = 39.7 bits (91), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%), Gaps = 1/71 (1%)
Query: 115 SREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEER 173
+R+ S ++ R+L G +IG+ G +K LREET ++ V + P S ER
Sbjct: 109 TRDSDDEGSARGESELRLLVHQSHAGAIIGRGGYRIKELREETSTQLKVYSQCCPQSTER 168
Query: 174 VIIIYSSPTKI 184
VI I P KI
Sbjct: 169 VIQIIGVPEKI 179
>gi|70989127|ref|XP_749413.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|66847044|gb|EAL87375.1| KH domain RNA-binding protein [Aspergillus fumigatus Af293]
gi|159128828|gb|EDP53942.1| KH domain RNA-binding protein [Aspergillus fumigatus A1163]
Length = 355
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 138/322 (42%), Gaps = 60/322 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ +PG +RV+ + A+
Sbjct: 41 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTARA--- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ LL+ ++ GG+ N N T RLL+ +N
Sbjct: 98 ---------------YALVAKGLLEGAPQM----GMGGIV----NNNGTHPVRLLISHNQ 134
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 135 MGTIIGRQGLKIKHIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAVWEIGK 190
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPW--- 367
L + ++ G ++P A +G S+ +S +G S P+
Sbjct: 191 CLIDDWQRGT----------GTILYNP----AVRASVGGSTSMNTSSVGNGYSSRPYNRT 236
Query: 368 ----------MGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
GGYG R + N P + + I A +G +IG+GG
Sbjct: 237 GNGADFSDGQSGGYG---RRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGG 293
Query: 418 FNVKQLQQETGASIHVEDAPTD 439
+ ++++ +GA I + AP D
Sbjct: 294 SKITEIRRSSGARISIAKAPHD 315
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNP 456
+++ + S+ + G +IGK G NV L+ ETG V +RV+ + +G
Sbjct: 38 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTARA 97
Query: 457 RSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ +L+ + GT RLL+ +++G I+G+ G I + + + +
Sbjct: 98 YALVAKGLLEGAPQMGMGGIVNNNGTHPVRLLISHNQMGTIIGRQGLKIKHI--QDASGV 155
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
R+V + L P S+E IV+++G+ E + A
Sbjct: 156 RMVAQKEML----PQSTERIVEVQGTPEGIEKA 184
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P +MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 275 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKA----PHDETGERMFTIMGSAQA 330
Query: 301 AKRALYEVSTLLHQNPRKDKP-PSSFPQ 327
++ALY LL++N +K S PQ
Sbjct: 331 NEKALY----LLYENLEAEKTRRSQLPQ 354
Score = 40.4 bits (93), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +P+ VGCI+G+GG I E+RR + A I + A PH + E + I GS+
Sbjct: 275 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKA------PHDETGERMFTIMGSA 328
Query: 541 E 541
+
Sbjct: 329 Q 329
>gi|355746831|gb|EHH51445.1| hypothetical protein EGM_10814, partial [Macaca fascicularis]
Length = 542
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 98/422 (23%), Positives = 167/422 (39%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D R+L P++ +G GK G +K++ ++TQ+++ +
Sbjct: 117 HSSREQGHAPGGTSQARQIDFPLRVLVPTQFVGANSGKEGLTIKNITKQTQSRVDIHRKE 176
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 177 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 205
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++ N +VG L+GK G ++++ ETG I + L
Sbjct: 206 -QKEADETKLAEEIPLKIFAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 262
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 263 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 313
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + S G P Y P SG +S P Q G S
Sbjct: 314 LGIFSTGLSVLSPPAGPRGAPPAAPY--HPFATHSGYFSSLYPHHQFGPFPHHHSYPEQE 371
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S VI E +
Sbjct: 372 VVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSKRMVIITGPPEAQFKA 431
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 432 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 486
Query: 514 RV 515
V
Sbjct: 487 IV 488
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P V + P++ +G +IGK G +K L A I +A P +R++II
Sbjct: 365 HSYPEQEVVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSKRMVIITGP 424
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 425 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 453
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 454 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 510
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 511 SQTAQRKIREI 521
>gi|328709625|ref|XP_001951678.2| PREDICTED: poly(rC)-binding protein 3-like isoform 1 [Acyrthosiphon
pisum]
Length = 411
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 40/214 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R++ +++G +IGK G IVK REE+ AKI ++D GS ER++ I S I K
Sbjct: 15 LRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTISGSTEAIYK-- 69
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
+ C + +++ + G +T RL+VP
Sbjct: 70 -------------AFSLICTKVEEFIEMQNGKTGATAIG---------KCGMTLRLIVPA 107
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G+ I+ +R TGA I+V +D LP +T+ V ++G + + ++ +
Sbjct: 108 SQCGSLIGKGGNKIKEIREATGAQIQV-ASDVLP---QSTERAVTLTGTRDSITQCIFHI 163
Query: 309 STLLHQNPRKD-------KPPSSFPQAY-GGQNF 334
++ ++P K KP P GGQ F
Sbjct: 164 CAVMVESPPKGVTIPYRAKPQMGAPVILAGGQAF 197
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 84/152 (55%), Gaps = 14/152 (9%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLWNP 456
+++++ ++G +IGK G VK+ ++E+GA I++ D ER++ S + E ++
Sbjct: 13 LTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTISGSTEAIYKA 70
Query: 457 RS---QTIDAILQLQNKTSEFSEKGT--ITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
S ++ +++QN + + G +T RL+VP+S+ G ++G+GG+ I E+R T A
Sbjct: 71 FSLICTKVEEFIEMQNGKTGATAIGKCGMTLRLIVPASQCGSLIGKGGNKIKEIREATGA 130
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
I+V D P S+E V + G+ + +
Sbjct: 131 QIQVA------SDVLPQSTERAVTLTGTRDSI 156
Score = 45.8 bits (107), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
A D+ N ++T RL++ VG ++GK+G++++R R E+GA I + +D P +
Sbjct: 3 AKSKDDSNISLTLRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI--SDGSCP-----E 55
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQ 314
+V ISG +A + T + +
Sbjct: 56 RIVTISGSTEAIYKAFSLICTKVEE 80
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + VPN+++GC++GK G I +R +GA IR+ + A +TD + I+G P+
Sbjct: 315 THEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEDREGSA-STDRTITITGNPDS 373
Query: 301 AKRALYEVS 309
A Y ++
Sbjct: 374 VALAQYLIN 382
>gi|389751124|gb|EIM92197.1| hypothetical protein STEHIDRAFT_89021 [Stereum hirsutum FP-91666
SS1]
Length = 339
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/313 (23%), Positives = 133/313 (42%), Gaps = 53/313 (16%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R L ++ G +IGKAG V LR++T K V+ IPG ERV+ + + +AK
Sbjct: 31 LRALVSTKDAGVIIGKAGKNVADLRDQTGVKAGVSKVIPGVHERVLTVTGAVDSVAK--- 87
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
A + +++E + S +++I RLL+ +N
Sbjct: 88 ----------------------AYALIIAQLVEANPASPSVSSSSGSHTSI--RLLISHN 123
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
++G ++G+ G I+ ++ +GA + V D LP +T+ +V + G P RA+ E+
Sbjct: 124 LMGTIIGRNGLKIKAIQDGSGARM-VASKDMLP---QSTERVVDVQGSPESIGRAIEEIG 179
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMG 369
L ++ + + G +H A +G + A N + G
Sbjct: 180 RCLLED---------WERGLGTVLYHPGVADERSGGSMGGAGRRAHN----------YSG 220
Query: 370 GYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK---ILCSAGKIGGVIGKGGFNVKQLQQE 426
Y + S G S + P S +++ I + +G +IG+GG + ++++
Sbjct: 221 SYSGRRSNAGEMSTRATSPPSPESPSQAANLRTQNISIPSDMVGCIIGRGGTKITEIRRL 280
Query: 427 TGASIHVEDAPTD 439
+G+ I + AP D
Sbjct: 281 SGSKISIAKAPHD 293
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 71/150 (47%), Gaps = 11/150 (7%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLWNP 456
+++ L S G +IGK G NV L+ +TG V ERV+ + A + +
Sbjct: 29 LTLRALVSTKDAGVIIGKAGKNVADLRDQTGVKAGVSKVIPGVHERVLTVTGAVDSVAKA 88
Query: 457 RSQTIDAILQLQ--NKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ I +++ + + S + RLL+ + +G I+G+ G I ++ +
Sbjct: 89 YALIIAQLVEANPASPSVSSSSGSHTSIRLLISHNLMGTIIGRNGLKIKAIQDGS----- 143
Query: 515 VVGAR-VKLQDPHPGSSECIVDIRGSSEHL 543
GAR V +D P S+E +VD++GS E +
Sbjct: 144 --GARMVASKDMLPQSTERVVDVQGSPESI 171
>gi|348524725|ref|XP_003449873.1| PREDICTED: RNA-binding protein Nova-1-like [Oreochromis niloticus]
Length = 503
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 109/483 (22%), Positives = 193/483 (39%), Gaps = 99/483 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
++L PS G +IGK G + L++ET A I ++ D PG+ ERV +I + +
Sbjct: 68 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGV 127
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
N + E + + +P + +L+ + N + A+L+VP
Sbjct: 128 HNFIAEKVREMPQSAQKPEPVS---ILQPQTTV--------------NPDRVKQAKLIVP 170
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE-MVQISGKPNVAKRALY 306
N+ G ++GK G ++ + ++GA +++ P +N E +V ISG+P ++A+
Sbjct: 171 NSTAGLIIGKGGATVKAVMEQSGAWVQL----SQKPEGINLQERVVTISGEPEQNRKAVE 226
Query: 307 EVSTLLHQNPRK----------------DKPPSSFPQAYGGQNFHSPPAPMADMHPL--- 347
+ + ++P+ + P+ P A G+ + A A L
Sbjct: 227 IIVQKIQEDPQSSSCLNISYSNVSGPVANSNPTGSPYANTGEVLPNAAAAAATASSLLGQ 286
Query: 348 ----GNSSWPARNSSLHG------MPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAE 397
G ++PA SSL G + + YG + +G G + G + V+A
Sbjct: 287 AGLTGMGAFPAAMSSLSGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAAS 346
Query: 398 FSMKILCSAGKIGG------------VIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+ +A + G GGF++ L TGAS
Sbjct: 347 ANPAAAAAANLLASYASDASSSAGHPATGLGGFSLGSLAAATGAS--------------- 391
Query: 446 RASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
G N S + + L K ++ ++ + VP + VG ILG+GG + E
Sbjct: 392 -----NGYLNASSPLMASSLLATEKLADGAKD---VVEIAVPENLVGAILGKGGKTLVEY 443
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS------SEHLISAHGTYQSFMTSGQS 559
+ T A I++ K + PG+ V I GS +++LIS TY+ + +
Sbjct: 444 QELTGARIQI----SKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRITYEQGVRATNP 499
Query: 560 MKV 562
KV
Sbjct: 500 QKV 502
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 100/233 (42%), Gaps = 51/233 (21%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERVI----RASA 449
E+ +K+L + G +IGKGG + QLQ+ETGA+I + +D + ERV A
Sbjct: 64 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 123
Query: 450 FEGLWNPRSQTIDAILQLQNK---TSEFSEKGTIT------TRLLVPSSKVGCILGQGGH 500
G+ N ++ + + Q K S + T+ +L+VP+S G I+G+GG
Sbjct: 124 LNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKLIVPNSTAGLIIGKGGA 183
Query: 501 VINEMRRRTQADIRVVGARVKLQDPHPGSS--ECIVDIRGSSEHLISAHGTYQSFMTSGQ 558
+ + ++ GA V+L G + E +V I G E Q
Sbjct: 184 TVKAVMEQS-------GAWVQLSQKPEGINLQERVVTISGEPE----------------Q 220
Query: 559 SMKVQPSSYQNI--NPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQN 609
+ K Q I +PQ SSC + SY N++ P N SPY N
Sbjct: 221 NRKAVEIIVQKIQEDPQSSSCLNI-----SYSNVS---GPVANSNPTGSPYAN 265
Score = 48.5 bits (114), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 23/129 (17%)
Query: 419 NVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG 478
N+ LQQ H++ DS +R + A E R+ T E+G
Sbjct: 23 NLHSLQQ-----THMDADNPDSRKRPLETPAEEAGCTKRTNT--------------GEEG 63
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
++L+PS G I+G+GG I ++++ T A I++ K +D +PG++E + I+G
Sbjct: 64 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL----SKSKDFYPGTTERVCLIQG 119
Query: 539 SSEHLISAH 547
+ E L H
Sbjct: 120 TVEALNGVH 128
>gi|224131210|ref|XP_002328482.1| predicted protein [Populus trichocarpa]
gi|222838197|gb|EEE76562.1| predicted protein [Populus trichocarpa]
Length = 346
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 128/309 (41%), Gaps = 54/309 (17%)
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
SA E S+ P A D LL+VH RII+ L G + + + ++ RLLVP + G
Sbjct: 3 SAKEEPDSSLPP---AMDGLLRVHKRIID-GLEGDSSHAPPSSGAKVSTRLLVPASQAGS 58
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA--------- 304
L+GK+G ++ ++ + +RVL A+ LP ++ D +V++ G+ +A
Sbjct: 59 LIGKQGGTVKSIQEASACIVRVLGAEDLPVFSLQDDRVVEVLGEAVGVHKAVELIASQLR 118
Query: 305 ----------LYEVSTLLHQNPRKDKPPSSFPQAYG---------------GQN--FHSP 337
L+E+ + P + PP Q++G GQN + P
Sbjct: 119 KFLVDRSIIPLFEMQMQMANPPMEQMPPH---QSWGGPQSLPLNPVGGPGYGQNPQYMQP 175
Query: 338 PAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINS-CPPGQMGEVSA 396
P + +P + P G + YG Q G S N+ P + +++
Sbjct: 176 PRQHDNYYPPSDMPPPMEKQPHQG------ISAYGRQTPMGGHASSNAQAAPSMITQITQ 229
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+ M+I S VIG G ++ +++ +GA++ +++ + + S
Sbjct: 230 Q--MQIPLSYAD--AVIGTAGASISYIRRASGATVTIQETRGVPEAMTVEISGTASQVQT 285
Query: 457 RSQTIDAIL 465
Q I AI
Sbjct: 286 AQQLIQAIF 294
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 11/96 (11%)
Query: 449 AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
A +GL + ID L+ + + S ++TRLLVP+S+ G ++G+ G + ++
Sbjct: 15 AMDGLLRVHKRIIDG-LEGDSSHAPPSSGAKVSTRLLVPASQAGSLIGKQGGTVKSIQEA 73
Query: 509 TQADIRVVGAR----VKLQDPHPGSSECIVDIRGSS 540
+ +RV+GA LQD + +V++ G +
Sbjct: 74 SACIVRVLGAEDLPVFSLQD------DRVVEVLGEA 103
>gi|451997944|gb|EMD90409.1| hypothetical protein COCHEDRAFT_1225891 [Cochliobolus
heterostrophus C5]
Length = 365
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/336 (24%), Positives = 146/336 (43%), Gaps = 63/336 (18%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A R + S++ G +IGKAG V LR+ET + V+ + G +RV+ + S + I+
Sbjct: 43 AQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSGIS 102
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
K + A LL+ + GG+ D T RLL
Sbjct: 103 KA------------------YGLAAKGLLEGAPAM----GMGGVIRTD----GTHPIRLL 136
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+ +N +G ++G++G I++++ +G +R++ + P +T+ +V++ G P ++A+
Sbjct: 137 ISHNQMGTIIGRQGLKIKQIQDASG--VRMVAQKEMLP--QSTERIVEVQGSPAGIEKAV 192
Query: 306 YEVSTLL---HQ--------NPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPA 354
+E+ L H+ NP P P G + AP M G S+
Sbjct: 193 WEIGKCLIDDHERGYGTVLYNPAVRVQPGVGP----GPAANGGSAPAGGMG--GGRSY-- 244
Query: 355 RNSSLHGMPSTPWMGGYGDQP----SRMGSGSINSCPPGQMGEVSAEF-SMKILCSAGKI 409
N + HG + D P R GS + + PP E E + I + +
Sbjct: 245 -NRTGHGAD-------FSDSPPAFSRRSGSDAASRPPPPTHTEDGEEMQTQNISIPSDMV 296
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAP-TDSDERV 444
G +IG+GG + ++++ + A I + AP D+ ER+
Sbjct: 297 GCIIGRGGSKISEIRKTSNARISIAKAPHDDTGERM 332
Score = 46.2 bits (108), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 71/148 (47%), Gaps = 10/148 (6%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLW 454
A+ +++ + S+ + G +IGK G NV L+ ETG V +RV+ + + G+
Sbjct: 43 AQLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVRAGVSKVVQGVHDRVLSVTGSLSGIS 102
Query: 455 NPRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+L+ GT RLL+ +++G I+G+ G I ++ + +
Sbjct: 103 KAYGLAAKGLLEGAPAMGMGGVIRTDGTHPIRLLISHNQMGTIIGRQGLKIKQI--QDAS 160
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGS 539
+R+V + L P S+E IV+++GS
Sbjct: 161 GVRMVAQKEML----PQSTERIVEVQGS 184
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 8/80 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R + A I + A P + M I+G +
Sbjct: 286 TQNISIPSDMVGCIIGRGGSKISEIRKTSNARISIAKA----PHDDTGERMFTITGSASA 341
Query: 301 AKRALYEVSTLLHQNPRKDK 320
++ALY LL++N +K
Sbjct: 342 NEKALY----LLYENLEAEK 357
Score = 40.0 bits (92), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +PS VGCI+G+GG I+E+R+ + A I + A PH + E + I GS+
Sbjct: 286 TQNISIPSDMVGCIIGRGGSKISEIRKTSNARISIAKA------PHDDTGERMFTITGSA 339
>gi|432116592|gb|ELK37385.1| Far upstream element-binding protein 3 [Myotis davidii]
Length = 651
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 73/330 (22%), Positives = 135/330 (40%), Gaps = 86/330 (26%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKIA 185
T+ IL P+ K+G VIGK G +K L+E T K+ + +P ++ + I P K+
Sbjct: 163 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 222
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL--FGGMASDDDNENSTITAR 243
+ A++ +L++ I E+D F G+ D + +
Sbjct: 223 Q----------------------AREMVLEI---IREKDQADFRGVRGDFASRMGGGSIE 257
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P+ +
Sbjct: 258 VSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMGPPDRCQH 312
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
A + ++ L+ +D +GG +A G W
Sbjct: 313 AAHVINELILTAQERD--------GFGG-------LAVARGRGRGRGDW----------- 346
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
MG+ PG + E++ A K G VIGKGG N+K +
Sbjct: 347 -------------SMGT-------PGGIQEIT------YTVPADKCGLVIGKGGENIKSI 380
Query: 424 QQETGASIHVEDAPTDSDERVIRASAFEGL 453
Q++GA + ++ P + + +R G+
Sbjct: 381 NQQSGAHVELQRNPPPNTDPNLRIFTIRGI 410
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 109/482 (22%), Positives = 181/482 (37%), Gaps = 146/482 (30%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQTESGCKIQIASESSGIPERPCVLTGTP------------ 131
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR F +D + NSTI +L+P + VG
Sbjct: 132 -------ESIE---QAKRLLGQIVDRCRNGPGF----HNDIDGNSTIQ-EILIPASKVGL 176
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G P ++A V ++
Sbjct: 177 VIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIR 233
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G GD
Sbjct: 234 EKDQAD-----------------------------------------------FRGVRGD 246
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SRMG GSI P F++ I VIG+ G +K++Q + G I
Sbjct: 247 FASRMGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 289
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF------------------- 474
+ S ER + + I+ ++ + F
Sbjct: 290 KPDDGISPERAAQVMGPPDRCQHAAHVINELILTAQERDGFGGLAVARGRGRGRGDWSMG 349
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSEC-- 532
+ G VP+ K G ++G+GG I + +++ GA V+LQ P +++
Sbjct: 350 TPGGIQEITYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPNTDPNL 402
Query: 533 -IVDIRG------SSEHLIS---------AHGTYQSFMTSGQSMKVQP--SSYQNINPQQ 574
I IRG + HLI A GTY GQS QP + +QN P +
Sbjct: 403 RIFTIRGIPQQIEVARHLIDEKVGGTSLGAPGTY------GQSPFSQPPAAPHQNTFPPR 456
Query: 575 SS 576
SS
Sbjct: 457 SS 458
Score = 46.2 bits (108), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q + G N G + A + + +G +IG+GG + ++Q
Sbjct: 48 PSVYGYGVQKRPLDDGVGNQL--GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQT 105
Query: 426 ETGASIHVEDAPTDSDER--VIRAS--AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
E+G I + + ER V+ + + E Q +D ++ TI
Sbjct: 106 ESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTI- 164
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+L+P+SKVG ++G+GG I +++ RT + ++
Sbjct: 165 QEILIPASKVGLVIGKGGETIKQLQERTGVKMVMI 199
>gi|324516472|gb|ADY46541.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 360
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 23/160 (14%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS---- 448
+VS ++++L ++G +IGK G ++K ++ +GA I++ D ER++ +
Sbjct: 18 QVSVILTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDG--SCPERIVTITGNVD 75
Query: 449 ----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINE 504
AF + N + + A L N K IT RL+VP+++ G ++G+GG I E
Sbjct: 76 TINKAFSMICNKFQEDMQA---LPNSV----PKPPITMRLIVPATQCGSLIGKGGSKIKE 128
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
+R T A I+V + P S+E V I GS++ ++
Sbjct: 129 IREATGASIQVASEML------PSSTERAVTISGSADAIV 162
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 37/189 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G+ +KS+R+ + AKI ++D GS ER++ I T T N
Sbjct: 26 RLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISD---GSCPERIVTI----TGNVDTIN 78
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
K +E M+ A + IT RL+VP
Sbjct: 79 KAFSMICNKFQEDMQ-------------------------ALPNSVPKPPITMRLIVPAT 113
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R TGA+I+V ++ LP +T+ V ISG + + +
Sbjct: 114 QCGSLIGKGGSKIKEIREATGASIQVA-SEMLP---SSTERAVTISGSADAIVLCMQHIC 169
Query: 310 TLLHQNPRK 318
+L + P K
Sbjct: 170 HILLEAPPK 178
Score = 44.3 bits (103), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 118 QSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVI 175
Q+ NS P + R++ P+ + G +IGK G+ +K +RE T A I VA + +P S ER +
Sbjct: 93 QALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQVASEMLPSSTERAV 152
Query: 176 IIYSSPTKIA 185
I S I
Sbjct: 153 TISGSADAIV 162
>gi|270001418|gb|EEZ97865.1| hypothetical protein TcasGA2_TC000237 [Tribolium castaneum]
Length = 415
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 100/222 (45%), Gaps = 42/222 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R++ +++G +IGK G IVK REE+ AKI ++D ER++ + S I K
Sbjct: 18 RLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTGSTNAIFK---- 71
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
A + E C+ +D+ G IT RL+VP +
Sbjct: 72 ----AFTLICKKFEEWCSQ------------FQDINSG---GSGVPRPPITLRLIVPASQ 112
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
G L+GK G I+ +R TGA+I+V ++ LP +T+ V ISG + +Y + T
Sbjct: 113 CGSLIGKGGSKIKEIREVTGASIQV-ASEMLP---NSTERAVTISGTGEAITQCIYHICT 168
Query: 311 LLHQNPRKD-------KPPSSFP------QAYGGQNFHSPPA 339
++ ++P K KP P QAY Q ++ PA
Sbjct: 169 VMLESPPKGATIPYRPKPQVGGPVILAGGQAYTIQGNYAVPA 210
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 79/156 (50%), Gaps = 21/156 (13%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPR 457
+++++ ++G +IGK G VK+ ++E+GA I++ D ER++ + G N
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVT---GSTNAI 69
Query: 458 SQTIDAILQ-LQNKTSEFSEKGT---------ITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ I + + S+F + + IT RL+VP+S+ G ++G+GG I E+R
Sbjct: 70 FKAFTLICKKFEEWCSQFQDINSGGSGVPRPPITLRLIVPASQCGSLIGKGGSKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
T A I+V + P S+E V I G+ E +
Sbjct: 130 VTGASIQVASEML------PNSTERAVTISGTGEAI 159
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 48/80 (60%), Gaps = 11/80 (13%)
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
+D+ N T+T RL++ VG ++GK+G++++R R E+GA I + +D P + +V
Sbjct: 8 NDDSNVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI--SDGSCP-----ERIV 60
Query: 293 QISGKPNVAKRALYEVSTLL 312
++G N A+++ TL+
Sbjct: 61 TVTGSTN----AIFKAFTLI 76
Score = 45.4 bits (106), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + VPN ++GC++GK G I +R +GA IR+ D TD + ISG P+
Sbjct: 320 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCDDRESGV--TDRTITISGNPDA 377
Query: 301 AKRALYEVS 309
A Y ++
Sbjct: 378 VALAQYLIN 386
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 5/87 (5%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNS---QPADTVYRILCPSRKIGGVIGKAGNIVK 151
N FK ++ K W + ++ + G S +P T+ R++ P+ + G +IGK G+ +K
Sbjct: 67 NAIFKAFTLICKKFEEWCSQFQDINSGGSGVPRPPITL-RLIVPASQCGSLIGKGGSKIK 125
Query: 152 SLREETQAKITVA-DTIPGSEERVIII 177
+RE T A I VA + +P S ER + I
Sbjct: 126 EIREVTGASIQVASEMLPNSTERAVTI 152
>gi|148689196|gb|EDL21143.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689197|gb|EDL21144.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
gi|148689198|gb|EDL21145.1| poly(rC) binding protein 4, isoform CRA_a [Mus musculus]
Length = 244
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 33/209 (15%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +RE++ A+IT+++ ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVF---- 73
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
H + A ++EDL A+ +T RL++P +
Sbjct: 74 ----------------HAVSMIAFK------LDEDLCAAPANGGSVSRPPVTLRLVIPAS 111
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV- 308
G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 112 QCGSLIGKAGTKIKEIRETTGAQVQV-AGDLLP---NSTERAVTVSGVPDAIILCVRQIC 167
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSP 337
+ +L +P +P + G F P
Sbjct: 168 AVILEHHPVSSEPLPRYCPPLGQPGFLCP 196
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|349802451|gb|AEQ16698.1| putative poly(rC)-binding protein 2 isoform g [Pipa carvalhoi]
Length = 207
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 95/207 (45%), Gaps = 26/207 (12%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSE 171
+SS S +S+P T+ R++ P+ + G +IGK G +K +RE T A++ VA D +P S
Sbjct: 2 SSSMTNSTASSKPPVTL-RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNST 60
Query: 172 ERVIIIYSSPTKIAKTQNKDDDSAAET----------KKESMEPHCAAQDALLKVHDRII 221
ER I I P I + + E+ K S P A A + + I
Sbjct: 61 ERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGA-YTIQGQAI 119
Query: 222 EEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRL 281
+ + D T + L +PN+++GC++G++G I +R +GA I++
Sbjct: 120 PQPI--------DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI-----A 166
Query: 282 PPCAMNTDEMVQISGKPNVAKRALYEV 308
P +TD V I+G A Y +
Sbjct: 167 NPVEGSTDRQVTITGSTASISLAQYLI 193
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/184 (25%), Positives = 82/184 (44%), Gaps = 51/184 (27%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE-DAPTDSDERVIRASAFEGLWNP 456
+++++ A + G +IGKGG +K++++ TGA + V D +S ER I + P
Sbjct: 16 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAITIAGI-----P 70
Query: 457 RSQTIDAILQLQNKTSEFSEKG-------------------------------------T 479
+S I+ + Q+ E KG T
Sbjct: 71 QS-IIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGAYTIQGQAIPQPIDASAQT 129
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+ L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I GS
Sbjct: 130 TSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITGS 182
Query: 540 SEHL 543
+ +
Sbjct: 183 TASI 186
Score = 47.4 bits (111), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 10/101 (9%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+T RL+VP + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P
Sbjct: 16 VTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVA-GDMLP---NSTERAITIAGIPQ 71
Query: 300 VAKRALYEVSTLLHQNPRKD-----KP-PSSFPQAYGGQNF 334
+ ++ ++ ++P K +P PSS P + G +
Sbjct: 72 SIIECVKQICVVMLESPPKGVTIPYRPKPSSSPVIFAGGAY 112
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 41/73 (56%), Gaps = 6/73 (8%)
Query: 472 SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSE 531
S S K +T RL+VP+S+ G ++G+GG I E+R T A ++V G D P S+E
Sbjct: 8 STASSKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG------DMLPNSTE 61
Query: 532 CIVDIRGSSEHLI 544
+ I G + +I
Sbjct: 62 RAITIAGIPQSII 74
>gi|346971553|gb|EGY15005.1| Poly(rC)-binding protein [Verticillium dahliae VdLs.17]
Length = 514
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 78/326 (23%), Positives = 137/326 (42%), Gaps = 47/326 (14%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A R + S++ G +IGK G V LR+ET K V+ + G +RV+ I I+
Sbjct: 45 AQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCEAIS 104
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
+ + ALL+ + GG+ N T +LL
Sbjct: 105 RA------------------YAIVAQALLEGAPSL----GMGGVP----QSNGTHPIKLL 138
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+ +N +G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P+ + A+
Sbjct: 139 ISHNQMGTIIGRQGLKIKHIQDVSG--VRMVAQKEMLP--QSTERIVEVQGTPDGIRAAI 194
Query: 306 YEVS------------TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWP 353
+E+S T+L+ NP P S P A GG SP P S P
Sbjct: 195 WEISKCLVDDWQRGTGTVLY-NPVVRTQPGSTP-AVGGT---SPSYPSTGGGRSQEYSSP 249
Query: 354 ARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVI 413
+ +G + GG R S + + PP + I A +G +I
Sbjct: 250 RVLRTGNGADFSSNGGGQRPYSRRSDSDAASRGPPTHDENGEELQTQNISIPADMVGCII 309
Query: 414 GKGGFNVKQLQQETGASIHVEDAPTD 439
G+ G + ++++ +GA I + AP D
Sbjct: 310 GRAGSKISEIRKTSGARISIAKAPHD 335
Score = 45.8 bits (107), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 76/155 (49%), Gaps = 10/155 (6%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLW 454
A+ +++ + S+ + G +IGKGG NV L+ ETG V +RV+ + E +
Sbjct: 45 AQLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCEAIS 104
Query: 455 NPRSQTIDAILQLQNKTSEFS---EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+ A+L+ GT +LL+ +++G I+G+ G I + + +
Sbjct: 105 RAYAIVAQALLEGAPSLGMGGVPQSNGTHPIKLLISHNQMGTIIGRQGLKIKHI--QDVS 162
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
+R+V + L P S+E IV+++G+ + + +A
Sbjct: 163 GVRMVAQKEML----PQSTERIVEVQGTPDGIRAA 193
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 8/93 (8%)
Query: 228 GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMN 287
G + D+N T + +P +MVGC++G+ G I +R +GA I + A P
Sbjct: 282 GPPTHDENGEELQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA----PHDET 337
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK 320
+ M I G + AL+ LL++N +K
Sbjct: 338 GERMFTIMGTSKANESALF----LLYENLEAEK 366
>gi|116787292|gb|ABK24450.1| unknown [Picea sitchensis]
Length = 357
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 68/313 (21%), Positives = 133/313 (42%), Gaps = 51/313 (16%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
R+L + G VIGK G V + ++ A+I ++ + PG+ +R+I++ S +I
Sbjct: 49 RLLVSNAAAGSVIGKGGATVSDFQTQSGARIQLSRNHEFFPGTTDRIILVTGSINEILTA 108
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
N +I + L ++D + T RL++P
Sbjct: 109 AN------------------------------LILQKLLSEAEDNNDVDEKTSQVRLVLP 138
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
N++ G ++GK G I+ + A+I++ D++ P +D +V I+G RA++
Sbjct: 139 NSVCGGIIGKGGATIKSFVEHSQASIKLSSQDQILPGV--SDRLVTITGTLEQQLRAIFL 196
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPW 367
+ + L ++P + ++ P +Y G + P+G P SS++G+ +
Sbjct: 197 IVSKLAEDPNYAQYANA-PLSYTGGSVAGIQGIPGGYTPVGY-GLPNYGSSVYGVNARNN 254
Query: 368 MGGYG-----DQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
G P +G + S A S+K+ ++G ++G+ G +
Sbjct: 255 KGLMAPLVAMRSPLPIGVPLVAS---------GALTSVKMAVPDDRVGVIVGRAGRTILD 305
Query: 423 LQQETGASIHVED 435
+QQ +GA I + D
Sbjct: 306 IQQVSGAKIKISD 318
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 343 DMHPLGNSSWPARNSSLHGMPS-TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
D+ P+ PA S PS +P G +PS GS + +SC ++
Sbjct: 6 DLSPMDTPESPASGYSTS--PSRSPKRDGLIYEPSEDGSKT-SSC-------------LR 49
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHV----EDAPTDSDERVIRASAFEGLWNPR 457
+L S G VIGKGG V Q ++GA I + E P +D ++ + +
Sbjct: 50 LLVSNAAAGSVIGKGGATVSDFQTQSGARIQLSRNHEFFPGTTDRIILVTGSINEILTAA 109
Query: 458 SQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
+ + +L ++ EK T RL++P+S G I+G+GG I +QA I++
Sbjct: 110 NLILQKLLSEAEDNNDVDEK-TSQVRLVLPNSVCGGIIGKGGATIKSFVEHSQASIKLSS 168
Query: 518 ARVKLQDPHPGSSECIVDIRGSSEHLISA 546
L PG S+ +V I G+ E + A
Sbjct: 169 QDQIL----PGVSDRLVTITGTLEQQLRA 193
>gi|345311367|ref|XP_001520914.2| PREDICTED: poly(rC)-binding protein 4-like [Ornithorhynchus
anatinus]
Length = 447
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 89/190 (46%), Gaps = 34/190 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 19 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTGAVF--- 72
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL G + +T RL++P
Sbjct: 73 -----------------HAVSMIAFK------LDEDLCTGPPNGGSVSKPPVTLRLVIPA 109
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 110 SQCGSLIGKAGAKIKEIRESTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 165
Query: 309 STLLHQNPRK 318
++ ++P K
Sbjct: 166 CAVILESPPK 175
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG 452
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ + G
Sbjct: 12 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTG 69
Query: 453 -LWNPRSQT---IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+++ S +D L K +T RL++P+S+ G ++G+ G I E+R
Sbjct: 70 AVFHAVSMIAFKLDEDLCTGPPNGGSVSKPPVTLRLVIPASQCGSLIGKAGAKIKEIRES 129
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TGAQVQVAG------DLLPNSTERAVTVSGVPDAII 159
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYSSP 181
S+P T+ R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + + P
Sbjct: 97 SKPPVTL-RLVIPASQCGSLIGKAGAKIKEIRESTGAQVQVAGDLLPNSTERAVTVSGVP 155
Query: 182 TKI 184
I
Sbjct: 156 DAI 158
Score = 40.0 bits (92), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 28/42 (66%)
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
D T + LVPN+++GC++G++G I +R +GA+I++
Sbjct: 274 DPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 315
>gi|119498177|ref|XP_001265846.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
gi|119414010|gb|EAW23949.1| KH domain RNA-binding protein [Neosartorya fischeri NRRL 181]
Length = 360
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 138/322 (42%), Gaps = 60/322 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ +PG +RV+ + A+
Sbjct: 46 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTARA--- 102
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ LL+ ++ GG+ N N T RLL+ +N
Sbjct: 103 ---------------YALVAKGLLEGAPQM----GMGGIV----NNNGTHPVRLLISHNQ 139
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 140 MGTIIGRQGLKIKHIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAVWEIGK 195
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPW--- 367
L + ++ G ++P A +G S+ +S +G S P+
Sbjct: 196 CLIDDWQRGT----------GTILYNP----AVRASVGGSTSMNTSSVGNGYNSRPYNRT 241
Query: 368 ----------MGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
GGYG R + N P + + I A +G +IG+GG
Sbjct: 242 GNGADFSDGQSGGYG---RRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGG 298
Query: 418 FNVKQLQQETGASIHVEDAPTD 439
+ ++++ +GA I + AP D
Sbjct: 299 SKITEIRRSSGARISIAKAPHD 320
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNP 456
+++ + S+ + G +IGK G NV L+ ETG V +RV+ + +G
Sbjct: 43 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTARA 102
Query: 457 RSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ +L+ + GT RLL+ +++G I+G+ G I + + + +
Sbjct: 103 YALVAKGLLEGAPQMGMGGIVNNNGTHPVRLLISHNQMGTIIGRQGLKIKHI--QDASGV 160
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
R+V + L P S+E IV+++G+ E + A
Sbjct: 161 RMVAQKEML----PQSTERIVEVQGTPEGIEKA 189
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P +MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 280 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKA----PHDETGERMFTIMGSAQA 335
Query: 301 AKRALYEVSTLLHQNPRKDKP-PSSFPQ 327
++ALY LL++N +K S PQ
Sbjct: 336 NEKALY----LLYENLEAEKTRRSQLPQ 359
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +P+ VGCI+G+GG I E+RR + A I + A PH + E + I GS+
Sbjct: 280 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKA------PHDETGERMFTIMGSA 333
Query: 541 E 541
+
Sbjct: 334 Q 334
>gi|47214279|emb|CAG01336.1| unnamed protein product [Tetraodon nigroviridis]
Length = 408
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 87/372 (23%), Positives = 156/372 (41%), Gaps = 75/372 (20%)
Query: 131 RILCPSRKIGGVIGKA------------------------GNIVKSLREETQAKIT--VA 164
R+L +++G +IGK G VK +RE+ +++ ++
Sbjct: 19 RLLMHGKEVGSIIGKVTPANVAAPDRLCSGSDPCSPLFQKGETVKKMREDVGGRVSTWLS 78
Query: 165 DTIPGSEERVIIIYS-SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRI--- 220
+P + R+++ + S +I N + + E P DA+ K I
Sbjct: 79 GRLPLPDARLLLSFQQSGARI----NISEGNCPERIVTITGPT----DAIFKAFAMIAYK 130
Query: 221 IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
EED+ M++ +T RL+VP + G L+GK G I+ +R TGA ++V D
Sbjct: 131 FEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVA-GDM 189
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKD-----KP-PSSFP------QA 328
LP +T+ V ISG P + + ++ ++ ++P K +P P+S P QA
Sbjct: 190 LP---NSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPVIFSGGQA 246
Query: 329 YGGQNFHSPPAP--MADMH----------PLGNSSWPARNSSLHGMPSTPW---MGGYGD 373
Y Q ++ P P ++ +H PLG ++ PA + W + +
Sbjct: 247 YTIQGQYAIPHPDQLSKLHQLAMQQPPFTPLGQTT-PAFPGTYPPTWRPRWPQLLLSFVP 305
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
+R S + G + ++ IG +IG+ G + +++Q +GA I +
Sbjct: 306 ADARSSSSVTAALDAGNQAS-----THELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKI 360
Query: 434 EDAPTDSDERVI 445
+A S ER I
Sbjct: 361 ANAMEGSSERQI 372
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 61/277 (22%), Positives = 109/277 (39%), Gaps = 75/277 (27%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 121 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEMREST 179
Query: 158 QAKITVA-DTIPGSEERV------------------IIIYSSPTKIAKTQNKDDDS---- 194
A++ VA D +P S ER +++ SP K A + +
Sbjct: 180 GAQVQVAGDMLPNSTERAVTISGTPEAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 239
Query: 195 ------AAETKKESMEPHCAAQDALLKVHDRIIEE------------------------- 223
A + + PH D L K+H +++
Sbjct: 240 IFSGGQAYTIQGQYAIPH---PDQLSKLHQLAMQQPPFTPLGQTTPAFPGTYPPTWRPRW 296
Query: 224 -DLFGGMASDDDNENSTITA-----------RLLVPNNMVGCLLGKRGDVIQRLRSETGA 271
L D +S++TA L +PN+++GC++G++G I +R +GA
Sbjct: 297 PQLLLSFVPADARSSSSVTAALDAGNQASTHELTIPNDLIGCIIGRQGTKINEIRQMSGA 356
Query: 272 NIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
I++ A +++ + I+G P A Y +
Sbjct: 357 QIKIANA-----MEGSSERQITITGTPANISLAQYLI 388
Score = 50.8 bits (120), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 61/130 (46%), Gaps = 24/130 (18%)
Query: 425 QETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSE----------F 474
Q++GA I++ + + ER++ + P A + K E
Sbjct: 93 QQSGARINISEG--NCPERIVTITG------PTDAIFKAFAMIAYKFEEDIINSMSNSPA 144
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIV 534
+ K +T RL+VP+S+ G ++G+GG I EMR T A ++V G D P S+E V
Sbjct: 145 TSKPPVTLRLVVPASQCGSLIGKGGSKIKEMRESTGAQVQVAG------DMLPNSTERAV 198
Query: 535 DIRGSSEHLI 544
I G+ E +I
Sbjct: 199 TISGTPEAII 208
Score = 40.4 bits (93), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 50/96 (52%), Gaps = 21/96 (21%)
Query: 458 SQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
S ++ A L N+ S T L +P+ +GCI+G+ G INE+R+ + G
Sbjct: 311 SSSVTAALDAGNQAS--------THELTIPNDLIGCIIGRQGTKINEIRQMS-------G 355
Query: 518 ARVKLQDPHPGSSECIVDIRGS------SEHLISAH 547
A++K+ + GSSE + I G+ +++LI+A
Sbjct: 356 AQIKIANAMEGSSERQITITGTPANISLAQYLINAR 391
>gi|255550830|ref|XP_002516463.1| nucleic acid binding protein, putative [Ricinus communis]
gi|223544283|gb|EEF45804.1| nucleic acid binding protein, putative [Ricinus communis]
Length = 306
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 83/180 (46%), Gaps = 49/180 (27%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
+I P+ ++G +IGK G +K L+ ++ AKI V D P S R++ + +P +IAK
Sbjct: 143 KIEIPNGRVGVIIGKGGETIKYLQIQSGAKIQVTRDMDADPNSPTRMVELMGNPDQIAKA 202
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR---- 243
+ + + + E D+ G + T++ R
Sbjct: 203 EQL-------------------------ISEVLAEADVGG---------SGTVSRRFTGQ 228
Query: 244 -------LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
+ +PNN VG ++GK GD I+ +++ TGA I+V+P LPP +TD V I G
Sbjct: 229 GGSEHFVMKIPNNKVGLVIGKGGDSIKNMQARTGARIQVIPL-HLPPGDTSTDRNVHIEG 287
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 82/177 (46%), Gaps = 24/177 (13%)
Query: 384 NSCP---PGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE---DAP 437
NS P P G S KI G++G +IGKGG +K LQ ++GA I V DA
Sbjct: 123 NSAPSAIPVSYGTYLGSSSKKIEIPNGRVGVIIGKGGETIKYLQIQSGAKIQVTRDMDAD 182
Query: 438 TDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTR-----------LLV 486
+S R++ Q I +L ++ GT++ R + +
Sbjct: 183 PNSPTRMVELMGNPDQIAKAEQLISEVL----AEADVGGSGTVSRRFTGQGGSEHFVMKI 238
Query: 487 PSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
P++KVG ++G+GG I M+ RT A I+V+ + P S++ V I G+SE +
Sbjct: 239 PNNKVGLVIGKGGDSIKNMQARTGARIQVIPLHLP---PGDTSTDRNVHIEGTSEQI 292
>gi|403174064|ref|XP_003333074.2| hypothetical protein PGTG_14860, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375170814|gb|EFP88655.2| hypothetical protein PGTG_14860, partial [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 365
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 75/351 (21%), Positives = 149/351 (42%), Gaps = 67/351 (19%)
Query: 123 SQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSP 181
+ PA V R L +++ G +IGK G V +RE+T K V+ + G +R+ +
Sbjct: 15 ADPASNVTLRALVSTKEAGVIIGKGGKTVAEIREQTGTKAGVSKAVQGVHDRIFSVSGGL 74
Query: 182 TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
++K + A + ++ AA D L V +
Sbjct: 75 EGVSK-------AYAIVAEAILQNPLAATDPALTVPPPTATTTII--------------- 112
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
R+LV +N++G ++G++G I+ ++ +G +R++ + + P +T+ +V++ G P+
Sbjct: 113 -RVLVSHNLMGSIIGRQGSKIKEIQDTSG--VRMVASKEMLP--QSTERVVEVQGAPDAI 167
Query: 302 KRALYEVSTLLHQNPRK--------------DKPPSSFP------------QAYGGQNFH 335
+ A++E+ L + + + P +++P Q +
Sbjct: 168 RVAIHEIGKCLMDDWERAHGTVLYQPGALGAEGPSAAYPGGVLAGGFGGANQGFSNGRRS 227
Query: 336 SPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSIN-SCPPGQMGEV 394
S P A+ +PL + A N + + + P R GS+ S PP +V
Sbjct: 228 SAPLGNANGNPLSGGARRASNYNSTNIE---------NPPHRSREGSLGASLPPASTDQV 278
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD-SDERV 444
+ I + +G +IGKGG + ++++ +G+ I + P D S ER+
Sbjct: 279 L--RTQNISIPSDMVGCIIGKGGAKINEIRRLSGSKISIAKTPHDESGERM 327
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 88/180 (48%), Gaps = 16/180 (8%)
Query: 383 INSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDE 442
INS G + ++ +++ L S + G +IGKGG V +++++TG V A +
Sbjct: 8 INSTGAG--ADPASNVTLRALVSTKEAGVIIGKGGKTVAEIREQTGTKAGVSKAVQGVHD 65
Query: 443 RVIRAS-AFEGLWNPRSQTIDAILQLQNKTSE------FSEKGTITTRLLVPSSKVGCIL 495
R+ S EG+ + +AILQ ++ T R+LV + +G I+
Sbjct: 66 RIFSVSGGLEGVSKAYAIVAEAILQNPLAATDPALTVPPPTATTTIIRVLVSHNLMGSII 125
Query: 496 GQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL-ISAHGTYQSFM 554
G+ G I E+ + + +R+V ++ L P S+E +V+++G+ + + ++ H + M
Sbjct: 126 GRQGSKIKEI--QDTSGVRMVASKEML----PQSTERVVEVQGAPDAIRVAIHEIGKCLM 179
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +PS VGCI+G+GG INE+RR + + I + + PH S E + I GS
Sbjct: 281 TQNISIPSDMVGCIIGKGGAKINEIRRLSGSKISIA------KTPHDESGERMFTIIGSP 334
Query: 541 E 541
E
Sbjct: 335 E 335
>gi|47226335|emb|CAG09303.1| unnamed protein product [Tetraodon nigroviridis]
Length = 760
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 122/288 (42%), Gaps = 26/288 (9%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
I +++ NN +G L+GK+G ++++ ETG I + L N + + + G
Sbjct: 340 IPLKIIASNNYIGRLIGKQGRNLKKIEEETGTKITISSLQDL--NIYNNERTITVKGSLE 397
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG--NSSWPARNS 357
A E+ L + ++ N + P +++ LG +S+ P S
Sbjct: 398 ACCNAEVEIMKKLRE---------AYENDVAAINQQTSLIPGLNLNALGIFSSALPVLPS 448
Query: 358 SLHGMPSTPWMG--------GYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+ + P +G G+ PS + S P Q E + + +
Sbjct: 449 AAGPRSTMPPVGPAGYNPFIGHSSHPSSLYGVPPASAIPHQHAAQEQEVAY-LFIPTQAV 507
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDA--PTDSDERVIRASAFEGLWNPRSQTIDAILQL 467
G +IGK G ++KQL GASI + A P ++ VI E + + + + +
Sbjct: 508 GALIGKKGQHIKQLAHFAGASIKIAPAEKPDATERMVIITGTPEAQFKAQGRIFGKLKEE 567
Query: 468 QNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
T + E+ + T + VPS+ G ++G+GG +NE++ T A++ V
Sbjct: 568 NIFTGK--EEVRLETHIRVPSTAAGRVIGKGGKTVNELQSLTSAEVIV 613
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 66/155 (42%), Gaps = 33/155 (21%)
Query: 129 VYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT-IPGSEERVIIIYSSPTKIAKT 187
V + P++ +G +IGK G +K L A I +A P + ER++II +P K
Sbjct: 497 VAYLFIPTQAVGALIGKKGQHIKQLAHFAGASIKIAPAEKPDATERMVIITGTPEAQFKA 556
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
Q + + ++ EE++F G E + + VP
Sbjct: 557 QGR-------------------------IFGKLKEENIFTG------KEEVRLETHIRVP 585
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
+ G ++GK G + L+S T A + ++P D+ P
Sbjct: 586 STAAGRVIGKGGKTVNELQSLTSAEV-IVPRDQTP 619
>gi|26346528|dbj|BAC36915.1| unnamed protein product [Mus musculus]
Length = 403
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 134/329 (40%), Gaps = 76/329 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGSVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFP------------QAYG--GQNFHSPPAPMADMHPLGNSSWPA 354
++ +P K P Q + GQ PA + + L + P
Sbjct: 167 CAVILGSPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPF 226
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
+ S+ +P G PS S S EF L IG VIG
Sbjct: 227 ASPSV--VP--------GLDPSTQTS--------------SQEF----LVPNDLIGCVIG 258
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ G + +++Q +GA I + + + ER
Sbjct: 259 RQGSKISEIRQMSGAHIKIGNQAEGAGER 287
Score = 54.7 bits (130), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|115442854|ref|XP_001218234.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
gi|114188103|gb|EAU29803.1| hypothetical protein ATEG_09612 [Aspergillus terreus NIH2624]
Length = 355
Score = 66.2 bits (160), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 74/326 (22%), Positives = 138/326 (42%), Gaps = 72/326 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ +PG +RV+ + A+
Sbjct: 45 RAIVSSKEAGIIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLHGTARA--- 101
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ LL+ ++ GG+ S+ N T RLL+ +N
Sbjct: 102 ---------------YALVAKGLLEGAPQM----GMGGIVSN----NGTHPVRLLISHNQ 138
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 139 MGTIIGRQGLKIKHIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAVWEIGK 194
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGG 370
L + ++ G ++P R S G +T G
Sbjct: 195 CLIDDWQRGT----------GTILYNPAV---------------RASVGSGSTNTNMGNG 229
Query: 371 YGDQP-SRMGSGSINSCPPG---------------QMGEVSAEF-SMKILCSAGKIGGVI 413
YG +P +R G+G+ S G + E E + I A +G +I
Sbjct: 230 YGSRPYNRTGNGADFSDQSGGYSSRRSNSDAGRFPMVAEDGDEIQTQNISIPADMVGCII 289
Query: 414 GKGGFNVKQLQQETGASIHVEDAPTD 439
G+ G + ++++ +GA I + AP D
Sbjct: 290 GRAGSKITEIRRSSGARISIAKAPHD 315
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 71/153 (46%), Gaps = 10/153 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNP 456
+++ + S+ + G +IGK G NV L+ ETG V +RV+ + G
Sbjct: 42 LTLRAIVSSKEAGIIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLHGTARA 101
Query: 457 RSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ +L+ S GT RLL+ +++G I+G+ G I + + + +
Sbjct: 102 YALVAKGLLEGAPQMGMGGIVSNNGTHPVRLLISHNQMGTIIGRQGLKIKHI--QDASGV 159
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
R+V + L P S+E IV+++G+ E + A
Sbjct: 160 RMVAQKEML----PQSTERIVEVQGTPEGIEKA 188
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 46/92 (50%), Gaps = 10/92 (10%)
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
M ++D +E T + +P +MVGC++G+ G I +R +GA I + A P
Sbjct: 265 MVAEDGDEIQT--QNISIPADMVGCIIGRAGSKITEIRRSSGARISIAKA----PHDETG 318
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNPRKDK 320
+ M I G ++ALY LL++N +K
Sbjct: 319 ERMFTIMGSAAANEKALY----LLYENLEAEK 346
>gi|322796009|gb|EFZ18633.1| hypothetical protein SINV_09712 [Solenopsis invicta]
Length = 440
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/199 (30%), Positives = 96/199 (48%), Gaps = 28/199 (14%)
Query: 122 NSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYS 179
N P+ T+ R++ +++G +IGK G IVK REE+ AKI ++D GS ER++ +
Sbjct: 11 NDDPSVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTG 67
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
I K A + E C+ + HD GG S
Sbjct: 68 PTNSIFK--------AFTLICKKFEEWCS------QFHDIQGGGAGGGGGVS-----RPP 108
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
IT RL+VP + G L+GK G I+ +R TGA+I+V ++ LP +T+ V ISG
Sbjct: 109 ITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQVA-SEMLP---NSTERAVTISGTSE 164
Query: 300 VAKRALYEVSTLLHQNPRK 318
+ +Y + ++ ++P K
Sbjct: 165 AITQCIYHICCVMLESPPK 183
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 31/166 (18%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G VK+ ++E+GA I++ D ER++ +
Sbjct: 15 SVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG----- 67
Query: 455 NPRSQTIDAILQLQNKTSEFSE-----------------KGTITTRLLVPSSKVGCILGQ 497
P + A + K E+ + IT RL+VP+S+ G ++G+
Sbjct: 68 -PTNSIFKAFTLICKKFEEWCSQFHDIQGGGAGGGGGVSRPPITLRLIVPASQCGSLIGK 126
Query: 498 GGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
GG I E+R T A I+V + P S+E V I G+SE +
Sbjct: 127 GGSKIKEIREVTGASIQVASEML------PNSTERAVTISGTSEAI 166
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + VPN ++GC++GK G I +R +GA IR+ + A TD + I+G P+
Sbjct: 372 THEMTVPNELIGCIIGKGGTKIAEIRQISGAMIRISNCEEREGGA--TDRTITITGNPDA 429
Query: 301 AKRALYEVS 309
A Y ++
Sbjct: 430 VALAQYLIN 438
>gi|324519086|gb|ADY47282.1| Poly(rC)-binding protein 3 [Ascaris suum]
Length = 342
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 82/160 (51%), Gaps = 23/160 (14%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS---- 448
+VS ++++L ++G +IGK G ++K ++ +GA I++ D ER++ +
Sbjct: 18 QVSVILTIRLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISDG--SCPERIVTITGNVD 75
Query: 449 ----AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINE 504
AF + N + + A L N K IT RL+VP+++ G ++G+GG I E
Sbjct: 76 TINKAFSMICNKFQEDMQA---LPNSV----PKPPITMRLIVPATQCGSLIGKGGSKIKE 128
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
+R T A I+V + P S+E V I GS++ ++
Sbjct: 129 IREATGASIQVASEML------PSSTERAVTISGSADAIV 162
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 37/189 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G+ +KS+R+ + AKI ++D GS ER++ I T T N
Sbjct: 26 RLLMQGKEVGSIIGKRGDHIKSIRDGSGAKINISD---GSCPERIVTI----TGNVDTIN 78
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
K +E M+ A + IT RL+VP
Sbjct: 79 KAFSMICNKFQEDMQ-------------------------ALPNSVPKPPITMRLIVPAT 113
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R TGA+I+V ++ LP +T+ V ISG + + +
Sbjct: 114 QCGSLIGKGGSKIKEIREATGASIQVA-SEMLPS---STERAVTISGSADAIVLCMQHIC 169
Query: 310 TLLHQNPRK 318
+L + P K
Sbjct: 170 HILLEAPPK 178
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 39/70 (55%), Gaps = 2/70 (2%)
Query: 118 QSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVI 175
Q+ NS P + R++ P+ + G +IGK G+ +K +RE T A I VA + +P S ER +
Sbjct: 93 QALPNSVPKPPITMRLIVPATQCGSLIGKGGSKIKEIREATGASIQVASEMLPSSTERAV 152
Query: 176 IIYSSPTKIA 185
I S I
Sbjct: 153 TISGSADAIV 162
>gi|195022402|ref|XP_001985568.1| GH14429 [Drosophila grimshawi]
gi|193899050|gb|EDV97916.1| GH14429 [Drosophila grimshawi]
Length = 362
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 143/318 (44%), Gaps = 54/318 (16%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQN 189
R++ +++G +IGK G IV REE+ AKI ++D GS ER++ + + + I
Sbjct: 27 RLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD---GSCPERIVTVSGTTSAIF---- 79
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
+A + E C+ + + KV + I RL+VP +
Sbjct: 80 ----AAFTLITKKFEEWCSQFNDVGKVGK-------------------TQIPIRLIVPAS 116
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R TG +I+V ++ LP +T+ V +SG + +Y++
Sbjct: 117 QCGSLIGKSGSKIKEIRQNTGCSIQV-ASEMLPN---STERAVTLSGSAEQITQCIYQIC 172
Query: 310 TLLHQNPRKDK--PPSSFPQAYGGQNFHSPPAPMADMHPL---GNSSWPARNSSLHGMPS 364
++ ++P + P PQ G P +A+ GN + P + S + + S
Sbjct: 173 LVMLESPPRGATIPYRPKPQVTG-------PVILANGQAFTIQGNYAVPTQEVSKNPLAS 225
Query: 365 TPWMGGYGDQPSRMGS---GSINSCPPGQMGEVSAEFSMK----ILCSAGKIGGVIGKGG 417
+G G P+ G ++ + Q+ +A + + + S IG +IGKGG
Sbjct: 226 LAALGLAGMTPASTGGINHTALAALAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGG 285
Query: 418 FNVKQLQQETGASIHVED 435
+ +++Q +GA I + +
Sbjct: 286 TKIAEIRQISGAMIRISN 303
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 82/166 (49%), Gaps = 25/166 (15%)
Query: 388 PGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRA 447
P ++ + S +++++ ++G +IGK G V + ++E+GA I++ D ER++
Sbjct: 14 PIKLEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTV 71
Query: 448 SAFEGLWNPRSQTIDAILQLQNK-----TSEFSEKGT-----ITTRLLVPSSKVGCILGQ 497
S + I A L K S+F++ G I RL+VP+S+ G ++G+
Sbjct: 72 SG-------TTSAIFAAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGK 124
Query: 498 GGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
G I E+R+ T I+V + P S+E V + GS+E +
Sbjct: 125 SGSKIKEIRQNTGCSIQVASEML------PNSTERAVTLSGSAEQI 164
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ V N+++GC++GK G I +R +GA IR+ + NTD + ISG P+
Sbjct: 270 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERE--GGNTDRTITISGNPDSVAL 327
Query: 304 ALYEVS 309
A Y ++
Sbjct: 328 AQYLIN 333
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 26/37 (70%)
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
T+T RL++ VG ++GK+G+++ R R E+GA I +
Sbjct: 23 TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI 59
>gi|444513545|gb|ELV10391.1| Poly(rC)-binding protein 4 [Tupaia chinensis]
Length = 399
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 77/315 (24%), Positives = 131/315 (41%), Gaps = 73/315 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGSNVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQV-AGDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWM 368
++ + + GQ PA + + L + P + S+ +P
Sbjct: 167 CAVILEG-----------FSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSV--VP----- 208
Query: 369 GGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETG 428
G PS S S EF L IG VIG+ G + +++Q +G
Sbjct: 209 ---GLDPSTQTS--------------SQEF----LVPNDLIGCVIGRQGSKISEIRQMSG 247
Query: 429 ASIHVEDAPTDSDER 443
A I + + + ER
Sbjct: 248 AHIKIGNQAEGAGER 262
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 93/213 (43%), Gaps = 20/213 (9%)
Query: 70 LSHSRCIRFCCIMDASKRNFFKKRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTV 129
+S C + S F FK + N SN SR P T+
Sbjct: 53 ISEGSCPERITTITGSTAAVFHAVSMIAFKLDEDLCAAPANGSNVSR--------PPVTL 104
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYSSPTKIAKTQ 188
R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + + P I
Sbjct: 105 -RLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 189 NKD-----DDSAAETKKESMEPHCAAQDALLKVHDR-IIEEDLFGGMASDDDNENSTITA 242
+ + + + + ++ P + L H + G+ D T +
Sbjct: 164 RQICAVILEGFSVQGQYGAVTPAEVTKLQQLSGHAVPFASPSVVPGL----DPSTQTSSQ 219
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
LVPN+++GC++G++G I +R +GA+I++
Sbjct: 220 EFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 252
Score = 57.0 bits (136), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 96/203 (47%), Gaps = 18/203 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + + S S + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAVSMIAFKLDEDLCAAPANGSNVS-RPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSY 567
T A ++V G D P S+E V + G + +I + + G S++ Q Y
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAIILCVRQICAVILEGFSVQGQ---Y 180
Query: 568 QNINPQQ-SSCQTMSSHQSSYQN 589
+ P + + Q +S H + +
Sbjct: 181 GAVTPAEVTKLQQLSGHAVPFAS 203
>gi|158293685|ref|XP_557579.3| AGAP004942-PA [Anopheles gambiae str. PEST]
gi|157016566|gb|EAL40201.3| AGAP004942-PA [Anopheles gambiae str. PEST]
Length = 382
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 87/354 (24%), Positives = 145/354 (40%), Gaps = 91/354 (25%)
Query: 125 PADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTK 183
PA T+ R++ +++G +IGK G IVK REE+ AKI ++D ER++ + S +
Sbjct: 18 PAVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDC--SCPERIVTVSGSRSA 75
Query: 184 IAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST---- 239
I K A + E C+ DN N+
Sbjct: 76 IYK--------AFTLITKKFEEWCS----------------------QFQDNANTQGKPQ 105
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
I RL+VP + G L+GK G I+ +R TG +I+V ++ LP +T+ V +SG
Sbjct: 106 IPIRLIVPASQCGSLIGKGGSKIKEIREITGCSIQV-ASEMLP---NSTERAVTLSGSAE 161
Query: 300 VAKRALYEVSTLLHQNPRKD-------KPPSSFP------QAYGGQ-NFHSP-------- 337
+ +Y + ++ ++P K KP + P QAY Q N+ P
Sbjct: 162 AITQCIYHICCVMLESPPKGATIPYRPKPQVNGPVIVANGQAYTIQGNYAVPAQEVSGIA 221
Query: 338 ----------------PAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSG 381
P+ ++P G S P ++L +P G Q + +
Sbjct: 222 KNPLAGLAALGLAGAIPSNTGGLNPTGKYSSP---NALEYIPHAALAALAGSQ---LRTN 275
Query: 382 SINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
+ + P Q S ++ IG +IGKGG + +++Q +GA I + +
Sbjct: 276 NNRNVAPVQ------SQSHEMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISN 323
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 76/159 (47%), Gaps = 24/159 (15%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
+ +++++ ++G +IGK G VK+ ++E+GA I++ D ER++ S
Sbjct: 19 AVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDC--SCPERIVTVSG----- 71
Query: 455 NPRSQTIDAILQLQNKTSEFSE----------KGTITTRLLVPSSKVGCILGQGGHVINE 504
RS A + K E+ K I RL+VP+S+ G ++G+GG I E
Sbjct: 72 -SRSAIYKAFTLITKKFEEWCSQFQDNANTQGKPQIPIRLIVPASQCGSLIGKGGSKIKE 130
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+R T I+V + P S+E V + GS+E +
Sbjct: 131 IREITGCSIQVASEML------PNSTERAVTLSGSAEAI 163
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
+ VPN+++GC++GK G I +R +GA IR+ + + NTD + I+G P+
Sbjct: 289 EMTVPNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERD--SGNTDRTITITGNPDSVA 346
Query: 303 RALYEVS 309
A Y ++
Sbjct: 347 LAQYLIN 353
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 11/79 (13%)
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
D+ T+T RL++ VG ++GK+G++++R R E+GA I + +D P + +V
Sbjct: 16 DDPAVTLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINI--SDCSCP-----ERIVT 68
Query: 294 ISGKPNVAKRALYEVSTLL 312
+SG ++ A+Y+ TL+
Sbjct: 69 VSG----SRSAIYKAFTLI 83
>gi|410979294|ref|XP_003996020.1| PREDICTED: far upstream element-binding protein 3 [Felis catus]
Length = 572
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/328 (21%), Positives = 133/328 (40%), Gaps = 82/328 (25%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKIA 185
T+ IL P+ K+G VIGK G +K L+E T K+ + +P ++ + I P K+
Sbjct: 163 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 222
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
+ A++ +L++ + D F G+ D + + +
Sbjct: 223 Q----------------------AREMVLEIIREKDQAD-FRGVRGDFNARVGGGSIEVS 259
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P+ + A
Sbjct: 260 VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSP-----ERAAQVMGPPDRCQHAA 314
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST 365
+ ++ L+ +D +GG +A G W
Sbjct: 315 HVINELILTAQERD--------GFGG-------LAVARGRGRGRGDW------------- 346
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
S+ + PG + E++ A K G VIGKGG N+K + Q
Sbjct: 347 ----------------SVGA--PGGVQEIT------YTVPADKCGLVIGKGGENIKSINQ 382
Query: 426 ETGASIHVEDAPTDSDERVIRASAFEGL 453
++GA + ++ P S + +R G+
Sbjct: 383 QSGAHVELQRNPPPSTDPSLRVFTIRGV 410
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 162/432 (37%), Gaps = 123/432 (28%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTP------------ 131
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR F +D + NSTI +L+P + VG
Sbjct: 132 -------ESIE---QAKRLLGQIVDRCRNGPGF----HNDIDGNSTIQ-EILIPASKVGL 176
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G P ++A V ++
Sbjct: 177 VIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIR 233
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G GD
Sbjct: 234 EKDQAD-----------------------------------------------FRGVRGD 246
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
+R+G GSI P F++ I VIG+ G +K++Q + G I
Sbjct: 247 FNARVGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 289
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF------------------- 474
+ S ER + + I+ ++ + F
Sbjct: 290 KPDDGVSPERAAQVMGPPDRCQHAAHVINELILTAQERDGFGGLAVARGRGRGRGDWSVG 349
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSE--- 531
+ G VP+ K G ++G+GG I + +++ GA V+LQ P S++
Sbjct: 350 APGGVQEITYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPSTDPSL 402
Query: 532 CIVDIRGSSEHL 543
+ IRG + +
Sbjct: 403 RVFTIRGVPQQI 414
Score = 45.8 bits (107), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q + G N G + A + + +G +IG+GG + ++Q
Sbjct: 48 PSVYGYGVQKRPLDDGVGNQL--GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQA 105
Query: 426 ETGASIHVEDAPTDSDER--VIRAS--AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
E+G I + + ER V+ + + E Q +D ++ TI
Sbjct: 106 ESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTI- 164
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRT 509
+L+P+SKVG ++G+GG I +++ RT
Sbjct: 165 QEILIPASKVGLVIGKGGETIKQLQERT 192
>gi|242021846|ref|XP_002431354.1| polyrC binding protein, putative [Pediculus humanus corporis]
gi|212516622|gb|EEB18616.1| polyrC binding protein, putative [Pediculus humanus corporis]
Length = 234
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 25/157 (15%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPR 457
+++++ ++G +IGK G VK+ ++E+GA I++ D ER++ + P
Sbjct: 15 LTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISDG--SCPERIVTVTG------PT 66
Query: 458 SQTIDAILQLQNKTSEFSE-----------KGTITTRLLVPSSKVGCILGQGGHVINEMR 506
+ A + K EF E K IT RL+VP+S+ G ++G+GG I E+R
Sbjct: 67 NAIFKAFSLICKKFEEFQELQSGGGSMGIPKPPITLRLIVPASQCGSLIGKGGSKIKEIR 126
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
T A I+V + P S+E V I G+SE +
Sbjct: 127 EVTGASIQVASEML------PNSTERAVTISGTSEAI 157
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/236 (27%), Positives = 106/236 (44%), Gaps = 53/236 (22%)
Query: 122 NSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
N P T+ R++ +++G +IGK G IVK REE+ AKI ++D GS I+ +
Sbjct: 8 NDDPNITLTIRLIMQGKEVGSIIGKKGEIVKRFREESGAKINISD---GSCPERIVTVTG 64
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE-DLFGGMASDDDNE--- 236
PT +A+ K I ++ + F + S +
Sbjct: 65 PT----------------------------NAIFKAFSLICKKFEEFQELQSGGGSMGIP 96
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
IT RL+VP + G L+GK G I+ +R TGA+I+V ++ LP +T+ V ISG
Sbjct: 97 KPPITLRLIVPASQCGSLIGKGGSKIKEIREVTGASIQV-ASEMLP---NSTERAVTISG 152
Query: 297 KPNVAKRALYEVSTLLHQNPRKD-------KPPSSFP------QAYGGQNFHSPPA 339
+ +Y + ++ ++P K KP + P QAY Q ++ PA
Sbjct: 153 TSEAITQCIYHICCVMLESPPKGATIPYRPKPQVAGPVILAGGQAYTIQGNYAVPA 208
Score = 40.4 bits (93), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIII 177
S G +P T+ R++ P+ + G +IGK G+ +K +RE T A I VA + +P S ER + I
Sbjct: 92 SMGIPKPPITL-RLIVPASQCGSLIGKGGSKIKEIREVTGASIQVASEMLPNSTERAVTI 150
Query: 178 YSSPTKIAK 186
+ I +
Sbjct: 151 SGTSEAITQ 159
>gi|402083824|gb|EJT78842.1| hypothetical protein GGTG_03937 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 373
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 77/328 (23%), Positives = 135/328 (41%), Gaps = 53/328 (16%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A R + S++ G +IGK G V LR+ET + V+ + G +RV+ I I+
Sbjct: 44 AQLTVRAIVSSKEAGVIIGKGGKNVADLRDETGVRAGVSKVVQGVHDRVLTITGGCDAIS 103
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
K + ALL+ + GG+ N T +LL
Sbjct: 104 KA------------------YAIVARALLEGAPTL----GMGGVV----QSNGTHPIKLL 137
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+ +N +G ++G+ G I+ ++ +G + V D LP + + +V++ G P +RA+
Sbjct: 138 ISHNQMGTIIGREGLKIKHIQDVSGVRM-VAQKDMLP---QSNERVVEVQGTPEGIQRAV 193
Query: 306 YEV------------STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWP 353
+E+ T+L+ + +P + P GG ++S A G+S
Sbjct: 194 WEICKCLIDDWQRATGTVLYNPAVRTQPGGAPPLTTGGPGYNSTGA----RGDYGSSPRV 249
Query: 354 AR--NSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGG 411
R N + STP + R S + N PP + I A +G
Sbjct: 250 TRTGNGADFSNGSTPRL-----YNRRSDSDAANRGPPTHDENGEEIQTQNISIPANMVGC 304
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTD 439
+IG+ G + ++++ +GA I + AP D
Sbjct: 305 IIGRAGSKISEIRKASGARISIAKAPHD 332
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 12/153 (7%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLW 454
A+ +++ + S+ + G +IGKGG NV L+ ETG V +RV+ + + +
Sbjct: 44 AQLTVRAIVSSKEAGVIIGKGGKNVADLRDETGVRAGVSKVVQGVHDRVLTITGGCDAIS 103
Query: 455 NPRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+ A+L+ GT +LL+ +++G I+G+ G I ++
Sbjct: 104 KAYAIVARALLEGAPTLGMGGVVQSNGTHPIKLLISHNQMGTIIGREGLKIKHIQ----- 158
Query: 512 DIRVVGARVKLQ-DPHPGSSECIVDIRGSSEHL 543
V G R+ Q D P S+E +V+++G+ E +
Sbjct: 159 --DVSGVRMVAQKDMLPQSNERVVEVQGTPEGI 189
Score = 43.9 bits (102), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
D+N T + +P NMVGC++G+ G I +R +GA I + A P + M
Sbjct: 284 DENGEEIQTQNISIPANMVGCIIGRAGSKISEIRKASGARISIAKA----PHDETGERMF 339
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKDK 320
I G + AL+ LL++N +K
Sbjct: 340 TIMGSAKANESALF----LLYENLEAEK 363
>gi|315055291|ref|XP_003177020.1| hypothetical protein MGYG_01105 [Arthroderma gypseum CBS 118893]
gi|311338866|gb|EFQ98068.1| hypothetical protein MGYG_01105 [Arthroderma gypseum CBS 118893]
Length = 367
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 76/321 (23%), Positives = 140/321 (43%), Gaps = 45/321 (14%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ + G +RV+ +
Sbjct: 51 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG----------- 99
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
P A V ++E GM N N T + RLL+ +N
Sbjct: 100 --------------PLQGTSKAYSIVAKSLLEGAPQMGMGGVVQN-NGTHSVRLLISHNQ 144
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 145 MGTIIGRQGLKIKYIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAIWEIGK 200
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSP-PAPMADMHPLGNSSWPARNSSLHGMPSTPWMG 369
L + ++ + A P P+A +P S + N + +G + G
Sbjct: 201 CLIDDWQRGTGTVLYNPAVRASVGSGPGQGPVAGSNPSYGGSSRSYNRTGNGADFSDHPG 260
Query: 370 GYG-----DQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQ 424
Y D P+R G G+ EV + I + +G +IG+GG + +++
Sbjct: 261 SYNRRGNNDNPNR---GIPLVTEDGE--EVQTQ---NISIPSDMVGCIIGRGGTKISEIR 312
Query: 425 QETGASIHVEDAP-TDSDERV 444
+ +GA I + AP D+ ER+
Sbjct: 313 RSSGARISIAKAPHDDTGERM 333
Score = 46.2 bits (108), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNP 456
+++ + S+ + G +IGK G NV L+ ETG V +RV+ + +G
Sbjct: 48 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKA 107
Query: 457 RSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
S ++L+ GT + RLL+ +++G I+G+ G I + + + +
Sbjct: 108 YSIVAKSLLEGAPQMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKYI--QDASGV 165
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
R+V + L P S+E IV+++G+ E + A
Sbjct: 166 RMVAQKEML----PQSTERIVEVQGTPEGIEKA 194
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 287 TQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKA----PHDDTGERMFTIMGSAQA 342
Query: 301 AKRALYEVSTLLHQNPRKDK 320
++ALY LL++N +K
Sbjct: 343 NEKALY----LLYENLEAEK 358
Score = 42.0 bits (97), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +PS VGCI+G+GG I+E+RR + A I + A PH + E + I GS+
Sbjct: 287 TQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKA------PHDDTGERMFTIMGSA 340
Query: 541 E 541
+
Sbjct: 341 Q 341
>gi|189238744|ref|XP_972178.2| PREDICTED: similar to P-element somatic inhibitor [Tribolium
castaneum]
Length = 727
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 42/194 (21%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE-ERVIIIYSSPTKIAKTQNK 190
I+ P K+G +IGK G +K L+E++ AK+ V P E E+ + I P+K+
Sbjct: 195 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPNQEQEKPLRISGDPSKV------ 248
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL-----FGGMASDDDNEN-------S 238
+ A V+D I E+++ GG DD +
Sbjct: 249 -------------------EYAKQLVYDLIAEKEMQNYNRRGGGGRQDDRQQYNDYGGGG 289
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
A +LVP VG ++GK GD+I+++++ETGA ++ A P + +SG P
Sbjct: 290 GNEAEVLVPRQAVGVVIGKGGDMIKKIQAETGARVQFQQAREEGPG----ERRCYLSGTP 345
Query: 299 NVAKRALYEVSTLL 312
++A + L+
Sbjct: 346 KQVEQARQRIEELI 359
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 28/156 (17%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGAS-IHVEDAPTDSDERVIRASAFEGLWNPRS 458
++I+ K+G +IGKGG +KQLQ+++GA + ++D P E+ +R S
Sbjct: 193 VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPNQEQEKPLRISGDPSKVEYAK 252
Query: 459 QTIDAIL---QLQN--------------KTSEFSEKGTITTRLLVPSSKVGCILGQGGHV 501
Q + ++ ++QN + +++ G +LVP VG ++G+GG +
Sbjct: 253 QLVYDLIAEKEMQNYNRRGGGGRQDDRQQYNDYGGGGGNEAEVLVPRQAVGVVIGKGGDM 312
Query: 502 INEMRRRTQADIRVVGARVKLQ---DPHPGSSECIV 534
I +++ T GARV+ Q + PG C +
Sbjct: 313 IKKIQAET-------GARVQFQQAREEGPGERRCYL 341
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 40/75 (53%), Gaps = 5/75 (6%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ + VP+ MVG ++G+ G+ I RL+SE+G I++ P + P D + +SG
Sbjct: 97 LNEDIKVPDKMVGLIIGRGGEQITRLQSESGCKIQMAPDSQGMP-----DRVCSLSGTKE 151
Query: 300 VAKRALYEVSTLLHQ 314
RA + ++HQ
Sbjct: 152 AINRAKELIMNIVHQ 166
Score = 40.8 bits (94), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 28/120 (23%), Positives = 53/120 (44%), Gaps = 12/120 (10%)
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQ 468
+G +IG+GG + +LQ E+G I + +RV S + N + I I+ +
Sbjct: 108 VGLIIGRGGEQITRLQSESGCKIQMAPDSQGMPDRVCSLSGTKEAINRAKELIMNIVHQR 167
Query: 469 NKTSEFSEKGTIT------------TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+ G +++P KVG I+G+GG I +++ ++ A + V+
Sbjct: 168 GMNNMNQGMGGGGGGGGGGGGGRNFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVI 227
>gi|291221774|ref|XP_002730893.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Saccoglossus kowalevskii]
Length = 437
Score = 65.9 bits (159), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/210 (28%), Positives = 90/210 (42%), Gaps = 40/210 (19%)
Query: 109 GNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
GN +S R + G+ D RIL S+ G +IGK GN + LR + A +TV D
Sbjct: 31 GNSQSSKRTKGGGDGPKVD--LRILLQSKNAGAIIGKGGNNIHRLRTQYNATVTVPDC-- 86
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
S P +I T +E+ A LL V + E +
Sbjct: 87 ----------SGPERIL---------TVTTNQET------ALSCLLDVIPVLEEYQQYKD 121
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+ D R+LV + G ++G+ G I+ LR +TGANI+V C +T
Sbjct: 122 LDFD-------CEMRMLVHQSQAGAIIGRAGFKIKELREQTGANIKVYSE----VCPNST 170
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNPRK 318
+ +VQ++G P V + + +L+Q P K
Sbjct: 171 ERVVQMNGSPEVVINCMRMILDVLNQTPIK 200
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 73/149 (48%), Gaps = 10/149 (6%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+ ++IL + G +IGKGG N+ +L+ + A++ V D ER++ + +
Sbjct: 47 KVDLRILLQSKNAGAIIGKGGNNIHRLRTQYNATVTVPDC--SGPERILTVTTNQ--ETA 102
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
S +D I L+ R+LV S+ G I+G+ G I E+R +T A+I+V
Sbjct: 103 LSCLLDVIPVLEEYQQYKDLDFDCEMRMLVHQSQAGAIIGRAGFKIKELREQTGANIKV- 161
Query: 517 GARVKLQDPHPGSSECIVDIRGSSEHLIS 545
+ P S+E +V + GS E +I+
Sbjct: 162 -----YSEVCPNSTERVVQMNGSPEVVIN 185
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 462 DAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVK 521
D+ + Q TS+F+ TT++ +P G I+G+GG I ++R + GA +K
Sbjct: 342 DSGMDQQYNTSQFT-----TTQVTIPKDLAGSIIGKGGSRIGQIREDS-------GALIK 389
Query: 522 LQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQ 563
+ +P PGS++ I+ I+G+ E + +A Q+ + + QS + Q
Sbjct: 390 IDEPLPGSNDRIITIKGTPEQIQNAQYLLQNRVRASQSYQQQ 431
Score = 46.6 bits (109), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 113 NSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEE 172
+S +Q + SQ T ++ P G +IGK G+ + +RE++ A I + + +PGS +
Sbjct: 342 DSGMDQQYNTSQF--TTTQVTIPKDLAGSIIGKGGSRIGQIREDSGALIKIDEPLPGSND 399
Query: 173 RVIIIYSSPTKIAKTQ 188
R+I I +P +I Q
Sbjct: 400 RIITIKGTPEQIQNAQ 415
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 390 QMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERVIRAS 448
Q ++ + M++L + G +IG+ GF +K+L+++TGA+I V + +S ERV++ +
Sbjct: 118 QYKDLDFDCEMRMLVHQSQAGAIIGRAGFKIKELREQTGANIKVYSEVCPNSTERVVQMN 177
Query: 449 A 449
Sbjct: 178 G 178
>gi|397493518|ref|XP_003817651.1| PREDICTED: RNA-binding protein Nova-2 [Pan paniscus]
Length = 349
Score = 65.9 bits (159), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 76/327 (23%), Positives = 140/327 (42%), Gaps = 34/327 (10%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
++L PS G +IGK G + L++ET A I ++ D PG+ ERV ++ + A+
Sbjct: 9 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT----AEA 64
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
N AE +E P + ++ + N + A+L+VP
Sbjct: 65 LNAVHSFIAEKVREI--PQAMTKPEVVNILQ-----------PQTTMNPDRAKQAKLIVP 111
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE-MVQISGKPNVAKRALY 306
N+ G ++GK G ++ + ++GA +++ P +N E +V +SG+P +A+
Sbjct: 112 NSTAGLIIGKGGATVKAVMEQSGAWVQL----SQKPEGINLQERVVTVSGEPEQVHKAVS 167
Query: 307 EVSTLLHQNPRKDKPPS-SFPQAYG----GQNFHSPPAPMADMHPLGNSSWPARNSSLHG 361
+ + ++P+ + S+ G SP A AD+ P ++ A S L G
Sbjct: 168 AIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLLG 227
Query: 362 MPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVK 421
+G + + ++ SA+ ++I +G ++GKGG +
Sbjct: 228 PAGLAGVGAFPAXXXXXAGAAGGFLTAEKLAAESAKELVEIAVPENLVGAILGKGGKTLV 287
Query: 422 QLQQETGASIHV----EDAPTDSDERV 444
+ Q+ TGA I + E P + RV
Sbjct: 288 EYQELTGARIQISKKGEFLPGTRNRRV 314
Score = 53.1 bits (126), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERVIRASAFEGL 453
E+ +K+L + G +IGKGG + QLQ+ETGA+I + +D + ERV
Sbjct: 5 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 64
Query: 454 WN-------------PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGH 500
N P++ T ++ + + + +L+VP+S G I+G+GG
Sbjct: 65 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGA 124
Query: 501 VINEMRRRTQADIRVVGARVKLQDPHPGSS--ECIVDIRGSSEHLISAHGTYQSFMTSGQ 558
+ + ++ GA V+L G + E +V + G E + A S
Sbjct: 125 TVKAVMEQS-------GAWVQLSQKPEGINLQERVVTVSGEPEQVHKA--------VSAI 169
Query: 559 SMKVQPSSYQNINPQQSSCQTMSSHQSS--YQNMNTQQSPY 597
KVQ +PQ SSC +S + N N SPY
Sbjct: 170 VQKVQE------DPQSSSCLNISYANVAGPVANSNPTGSPY 204
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 45/72 (62%), Gaps = 4/72 (5%)
Query: 476 EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVD 535
E+G ++L+PS G I+G+GG I ++++ T A I++ K +D +PG++E +
Sbjct: 2 EEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL----SKSKDFYPGTTERVCL 57
Query: 536 IRGSSEHLISAH 547
++G++E L + H
Sbjct: 58 VQGTAEALNAVH 69
>gi|270010095|gb|EFA06543.1| hypothetical protein TcasGA2_TC009450 [Tribolium castaneum]
Length = 756
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 42/194 (21%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE-ERVIIIYSSPTKIAKTQNK 190
I+ P K+G +IGK G +K L+E++ AK+ V P E E+ + I P+K+
Sbjct: 224 IMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPNQEQEKPLRISGDPSKV------ 277
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL-----FGGMASDDDNEN-------S 238
+ A V+D I E+++ GG DD +
Sbjct: 278 -------------------EYAKQLVYDLIAEKEMQNYNRRGGGGRQDDRQQYNDYGGGG 318
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
A +LVP VG ++GK GD+I+++++ETGA ++ A P + +SG P
Sbjct: 319 GNEAEVLVPRQAVGVVIGKGGDMIKKIQAETGARVQFQQAREEGPG----ERRCYLSGTP 374
Query: 299 NVAKRALYEVSTLL 312
++A + L+
Sbjct: 375 KQVEQARQRIEELI 388
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 75/156 (48%), Gaps = 28/156 (17%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGAS-IHVEDAPTDSDERVIRASAFEGLWNPRS 458
++I+ K+G +IGKGG +KQLQ+++GA + ++D P E+ +R S
Sbjct: 222 VEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPNQEQEKPLRISGDPSKVEYAK 281
Query: 459 QTIDAIL---QLQN--------------KTSEFSEKGTITTRLLVPSSKVGCILGQGGHV 501
Q + ++ ++QN + +++ G +LVP VG ++G+GG +
Sbjct: 282 QLVYDLIAEKEMQNYNRRGGGGRQDDRQQYNDYGGGGGNEAEVLVPRQAVGVVIGKGGDM 341
Query: 502 INEMRRRTQADIRVVGARVKLQ---DPHPGSSECIV 534
I +++ T GARV+ Q + PG C +
Sbjct: 342 IKKIQAET-------GARVQFQQAREEGPGERRCYL 370
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 5/80 (6%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ + VP+ MVG ++G+ G+ I RL+SE+G I++ P + P D + +SG
Sbjct: 120 LNEDIKVPDKMVGLIIGRGGEQITRLQSESGCKIQMAPDSQGMP-----DRVCSLSGTKE 174
Query: 300 VAKRALYEVSTLLHQNPRKD 319
RA + ++HQ R +
Sbjct: 175 AINRAKELIMNIVHQRGRTE 194
Score = 42.7 bits (99), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 28/126 (22%), Positives = 53/126 (42%), Gaps = 18/126 (14%)
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQ 468
+G +IG+GG + +LQ E+G I + +RV S + N + I I+ +
Sbjct: 131 VGLIIGRGGEQITRLQSESGCKIQMAPDSQGMPDRVCSLSGTKEAINRAKELIMNIVHQR 190
Query: 469 NKTSEFSEKGTIT------------------TRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
+T +++P KVG I+G+GG I +++ ++
Sbjct: 191 GRTEGLGMNNMNQGMGGGGGGGGGGGGGRNFVEIMIPGPKVGLIIGKGGETIKQLQEKSG 250
Query: 511 ADIRVV 516
A + V+
Sbjct: 251 AKMVVI 256
>gi|443685583|gb|ELT89137.1| hypothetical protein CAPTEDRAFT_171528 [Capitella teleta]
Length = 398
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 45/211 (21%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
RIL S+ G +IGK G +K LR + A +TV D+ ERV+ + ++
Sbjct: 29 RILLQSKNAGAIIGKGGANIKRLRSDYNATVTVPDS--SGPERVLTVGAN---------- 76
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
A + LL V + + F + + R L+ +
Sbjct: 77 ---------------LGTALEILLDVIPSLEDYKRFKDLEFE-------CEMRWLIHQSQ 114
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCA-MNTDEMVQISGKPNVAKRALYEVS 309
GC++G+ G+ I+ LR ETGA I+V CA +++ +VQ++GKP V +L +
Sbjct: 115 AGCVIGRGGNKIKELRDETGAQIKVYSQ-----CAPQSSERIVQLTGKPRVVVNSLATIF 169
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAP 340
LL PP F Y NF AP
Sbjct: 170 DLLQT-----APPKGFNNPYDPNNFDEFYAP 195
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 76/154 (49%), Gaps = 18/154 (11%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
++IL + G +IGKGG N+K+L+ + A++ V D + ERV+ A L
Sbjct: 28 LRILLQSKNAGAIIGKGGANIKRLRSDYNATVTVPD--SSGPERVLTVGA--NLGTALEI 83
Query: 460 TIDAILQLQN----KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+D I L++ K EF R L+ S+ GC++G+GG+ I E+R T A I+V
Sbjct: 84 LLDVIPSLEDYKRFKDLEFE----CEMRWLIHQSQAGCVIGRGGNKIKELRDETGAQIKV 139
Query: 516 VGARVKLQDPHPGSSECIVDIRGSSEHLISAHGT 549
P SSE IV + G ++++ T
Sbjct: 140 ------YSQCAPQSSERIVQLTGKPRVVVNSLAT 167
Score = 40.0 bits (92), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 34/58 (58%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ 188
++ P G +IGK G+ ++ +R+E+ A I + + + GS++R+I I S +I Q
Sbjct: 327 QVSIPKDLAGAIIGKGGSRIRQIRQESGAGINIDEPMQGSQDRIITITGSQDQIQNAQ 384
>gi|326674258|ref|XP_003200102.1| PREDICTED: RNA-binding protein Nova-1 isoform 2 [Danio rerio]
Length = 517
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 188/480 (39%), Gaps = 92/480 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
++L PS G +IGK G + L++ET A I ++ D PG+ ERV +I + +
Sbjct: 81 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT----VEA 136
Query: 188 QNKDDDSAAETKKE------SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
N D AE +E EP Q DR+ +
Sbjct: 137 LNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQ------------------- 177
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE-MVQISGKPNV 300
A+L+VPN+ G ++GK G ++ + ++GA +++ P +N E +V ISG+P
Sbjct: 178 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL----SQKPDGINLQERVVTISGEPEQ 233
Query: 301 AKRALYEVSTLLHQNPRKDK----PPSSFPQAYGGQN-FHSPPAPMADMHPLGNSSWPAR 355
++A+ + + ++P+ S+ N SP A A++ P ++ A
Sbjct: 234 NRKAVEIIVQKIQEDPQSSSCLNISYSNISGPVANSNPTGSPYANSAEVMPAAAAAAAAT 293
Query: 356 NSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGK 415
SSL G S + G G P+ M S S N ++ ++ L S G +G
Sbjct: 294 ASSLLGQAS---LAGVGAFPTTMSSFSGNDL-------LAITSALNTLASYGYNTNSLGL 343
Query: 416 G---------------GFNVKQLQQETGASIHVEDAPTDSDERVIRASAF---------- 450
G N + + DA T + F
Sbjct: 344 GLNPAAASGVLAAVAASANPAAAAAANLLASYANDASTSAGHPATSLGGFTLGSLAAATG 403
Query: 451 --EGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
G + S + + L K +E ++ + VP + VG ILG+GG + E +
Sbjct: 404 ATNGYLSAASPLVASSLLATEKLAEGAKD---VVEIAVPENLVGAILGKGGKTLVEYQEL 460
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGS------SEHLISAHGTYQSFMTSGQSMKV 562
T A I++ K + PG+ V I GS +++LIS TY+ + + KV
Sbjct: 461 TGARIQI----SKKGEFVPGTRNRKVTITGSPAATQAAQYLISQRITYEQGVRATNPQKV 516
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 53/234 (22%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERV-IRASAFEG 452
E+ +K+L + G +IGKGG + QLQ+ETGA+I + +D + ERV + E
Sbjct: 77 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 136
Query: 453 LWN------------PRS-QTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGG 499
L N P+S Q + + LQ +T+ ++ +L+VP+S G I+G+GG
Sbjct: 137 LNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDR-VKQAKLIVPNSTAGLIIGKGG 195
Query: 500 HVINEMRRRTQADIRVVGARVKLQDPHPGSS--ECIVDIRGSSEHLISAHGTYQSFMTSG 557
+ + ++ GA V+L G + E +V I G E
Sbjct: 196 ATVKAVMEQS-------GAWVQLSQKPDGINLQERVVTISGEPE---------------- 232
Query: 558 QSMKVQPSSYQNI--NPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQN 609
Q+ K Q I +PQ SSC + SY N++ P N SPY N
Sbjct: 233 QNRKAVEIIVQKIQEDPQSSSCLNI-----SYSNIS---GPVANSNPTGSPYAN 278
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 62/123 (50%), Gaps = 12/123 (9%)
Query: 432 HVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQ-------LQNKTSEFSEKGTITTRL 484
H+E P DS +R + + E R+ T D Q + F E+G ++
Sbjct: 24 HMESDPPDSRKRPLE-TPTEASSTKRTNTGDRCNQAAIHDPPFSSDIVGFHEEGEYFLKV 82
Query: 485 LVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
L+PS G I+G+GG I ++++ T A I++ K +D +PG++E + I+G+ E L
Sbjct: 83 LIPSYAAGSIIGKGGQTIVQLQKETGATIKL----SKSKDFYPGTTERVCLIQGTVEALN 138
Query: 545 SAH 547
+ H
Sbjct: 139 NVH 141
>gi|195128219|ref|XP_002008562.1| GI13561 [Drosophila mojavensis]
gi|193920171|gb|EDW19038.1| GI13561 [Drosophila mojavensis]
Length = 362
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 83/340 (24%), Positives = 151/340 (44%), Gaps = 55/340 (16%)
Query: 110 NWSNSSREQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
N S+S+ P+ T+ R++ +++G +IGK G IV REE+ AKI ++D
Sbjct: 5 NTSSSASGAPIKLEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--- 61
Query: 169 GS-EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
GS ER++ + + I SA + E C+ + + KV
Sbjct: 62 GSCPERIVTVSGTTNAIF--------SAFTLITKKFEEWCSQFNDVGKVGK--------- 104
Query: 228 GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMN 287
+ I RL+VP + G L+GK G I+ +R TG +I+V ++ LP +
Sbjct: 105 ----------TQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV-ASEMLPN---S 150
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK--PPSSFPQAYGGQNFHSPPAPMADMH 345
T+ V +SG + +Y++ ++ ++P + P PQ G P +A+
Sbjct: 151 TERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTG-------PVILANGQ 203
Query: 346 PL---GNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGS---GSINSCPPGQMGEVSAEFS 399
GN + P + + + + S +G G P+ G ++ + Q+ +A +
Sbjct: 204 AFTIQGNYAVPTQEVAKNPLASLAALGLAGMTPASTGGINHTALAALAGSQLRTANANRA 263
Query: 400 MK----ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
+ + S IG +IGKGG + +++Q +GA I + +
Sbjct: 264 QQQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 303
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 82/162 (50%), Gaps = 17/162 (10%)
Query: 388 PGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRA 447
P ++ + S +++++ ++G +IGK G V + ++E+GA I++ D ER++
Sbjct: 14 PIKLEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTV 71
Query: 448 SAFEGLWNPRSQTIDAIL-QLQNKTSEFSEKGT-----ITTRLLVPSSKVGCILGQGGHV 501
S G N I + + S+F++ G I RL+VP+S+ G ++G+ G
Sbjct: 72 S---GTTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSK 128
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
I E+R+ T I+V + P S+E V + GS+E +
Sbjct: 129 IKEIRQTTGCSIQVASEML------PNSTERAVTLSGSAEQI 164
Score = 43.1 bits (100), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ V N+++GC++GK G I +R +GA IR+ + NTD + ISG P+
Sbjct: 270 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERE--GGNTDRTITISGNPDSVAL 327
Query: 304 ALYEVS 309
A Y ++
Sbjct: 328 AQYLIN 333
>gi|196049606|pdb|2JZX|A Chain A, Pcbp2 Kh1-Kh2 Domains
Length = 160
Score = 65.5 bits (158), Expect = 8e-08, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 85/153 (55%), Gaps = 16/153 (10%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAFEGLWNP 456
++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A ++
Sbjct: 5 LTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKA 62
Query: 457 RSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+ ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+R T A
Sbjct: 63 FAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGA 120
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
++V G D P S+E + I G + +I
Sbjct: 121 QVQVAG------DMLPNSTERAITIAGIPQSII 147
Score = 62.8 bits (151), Expect = 6e-07, Method: Composition-based stats.
Identities = 50/171 (29%), Positives = 79/171 (46%), Gaps = 38/171 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 8 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 56
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 57 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 96
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P
Sbjct: 97 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGIP 143
Score = 39.7 bits (91), Expect = 5.5, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 29/40 (72%)
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
+N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 1 KNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 40
>gi|195377361|ref|XP_002047459.1| GJ11921 [Drosophila virilis]
gi|194154617|gb|EDW69801.1| GJ11921 [Drosophila virilis]
Length = 589
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/318 (24%), Positives = 142/318 (44%), Gaps = 54/318 (16%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQN 189
R++ +++G +IGK G IV REE+ AKI ++D GS ER++ + + I
Sbjct: 27 RLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD---GSCPERIVTVSGTTNAIF---- 79
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
SA + E C+ + + KV + I RL+VP +
Sbjct: 80 ----SAFTLITKKFEEWCSQFNDVGKVGK-------------------TQIPIRLIVPAS 116
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R TG +I+V ++ LP +T+ V +SG + +Y++
Sbjct: 117 QCGSLIGKSGSKIKEIRQTTGCSIQV-ASEMLPN---STERAVTLSGSAEQITQCIYQIC 172
Query: 310 TLLHQNPRKDK--PPSSFPQAYGGQNFHSPPAPMADMHPL---GNSSWPARNSSLHGMPS 364
++ ++P + P PQ G P +A+ GN + P + + + + S
Sbjct: 173 LVMLESPPRGATIPYRPKPQVTG-------PVILANGQAFTIQGNYAVPTQEVAKNPLAS 225
Query: 365 TPWMGGYGDQPSRMGS---GSINSCPPGQMGEVSAEFSMK----ILCSAGKIGGVIGKGG 417
+G G P+ G ++ + Q+ +A + + + S IG +IGKGG
Sbjct: 226 LAALGLAGMTPASTGGINHTALAALAGSQLRTANANRAQQQQHEMTVSNDLIGCIIGKGG 285
Query: 418 FNVKQLQQETGASIHVED 435
+ +++Q +GA I + +
Sbjct: 286 TKIAEIRQISGAMIRISN 303
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 83/165 (50%), Gaps = 17/165 (10%)
Query: 385 SCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 444
S P ++ + S +++++ ++G +IGK G V + ++E+GA I++ D ER+
Sbjct: 11 SGAPIKLEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERI 68
Query: 445 IRASAFEGLWNPRSQTIDAIL-QLQNKTSEFSEKGT-----ITTRLLVPSSKVGCILGQG 498
+ S G N I + + S+F++ G I RL+VP+S+ G ++G+
Sbjct: 69 VTVS---GTTNAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKS 125
Query: 499 GHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
G I E+R+ T I+V + P S+E V + GS+E +
Sbjct: 126 GSKIKEIRQTTGCSIQVASEML------PNSTERAVTLSGSAEQI 164
Score = 42.0 bits (97), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 42/74 (56%), Gaps = 11/74 (14%)
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
T+T RL++ VG ++GK+G+++ R R E+GA I + +D P + +V +SG
Sbjct: 23 TLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINI--SDGSCP-----ERIVTVSGTT 75
Query: 299 NVAKRALYEVSTLL 312
N A++ TL+
Sbjct: 76 N----AIFSAFTLI 85
>gi|395516948|ref|XP_003762645.1| PREDICTED: poly(rC)-binding protein 4 [Sarcophilus harrisii]
Length = 338
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 32/189 (16%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R++ +++G +IGK G VK +RE++ A+IT+++ ER+ I S +
Sbjct: 20 LRMIMHGKEVGSIIGKKGETVKRIREQSCARITISEG--SCPERITTITGSTGAVF---- 73
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
H + A ++EDL G + +T RL++P +
Sbjct: 74 ----------------HAVSMIAFK------LDEDLCTGPPNGGSISKPPVTLRLVIPAS 111
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 112 QCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQIC 167
Query: 310 TLLHQNPRK 318
++ ++P K
Sbjct: 168 AVILESPPK 176
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 78/156 (50%), Gaps = 12/156 (7%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG 452
E+S +++++ ++G +IGK G VK++++++ A I + + ER+ + G
Sbjct: 13 ELSITLTLRMIMHGKEVGSIIGKKGETVKRIREQSCARITISEG--SCPERITTITGSTG 70
Query: 453 -LWNPRSQT---IDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+++ S +D L K +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAVSMIAFKLDEDLCTGPPNGGSISKPPVTLRLVIPASQCGSLIGKAGTKIKEIRET 130
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 131 TGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYSSP 181
S+P T+ R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + + P
Sbjct: 98 SKPPVTL-RLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVP 156
Query: 182 TKI 184
I
Sbjct: 157 DAI 159
>gi|380792097|gb|AFE67924.1| poly(rC)-binding protein 2 isoform f, partial [Macaca mulatta]
Length = 197
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 87/157 (55%), Gaps = 16/157 (10%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAFEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPTNA 67
Query: 453 LWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+R
Sbjct: 68 IFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEIRE 125
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E + I G + +I
Sbjct: 126 STGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 96/212 (45%), Gaps = 42/212 (19%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPTN------ 66
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
A A + D++ EED+ M + +T RL+VP +
Sbjct: 67 ------------------AIFKAFAMIIDKL-EEDISSSMTNSTAASRPPVTLRLVVPAS 107
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + ++
Sbjct: 108 QCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQIC 163
Query: 310 TL----LHQNPRKD-----KP-PSSFPQAYGG 331
+ L Q+P K +P PSS P + G
Sbjct: 164 VVMLETLSQSPPKGVTIPYRPKPSSSPVIFAG 195
Score = 42.4 bits (98), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
+D N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 7 EDGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>gi|242061024|ref|XP_002451801.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
gi|241931632|gb|EES04777.1| hypothetical protein SORBIDRAFT_04g007950 [Sorghum bicolor]
Length = 688
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 98/205 (47%), Gaps = 30/205 (14%)
Query: 112 SNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIP 168
S++ + S+G Q T +I P+ ++G +IGKAG ++ ++ ++ AKI V + P
Sbjct: 129 SSAPQYSSYGGYQ--GTSKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEP 186
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
G+ R + + +P +I+K + + AE A + R GG
Sbjct: 187 GALTRPVELSGNPDQISKAEQLIKEVLAE----------ADAGSSGGGSGRKYNAPQPGG 236
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
T ++ + NN VG ++GK G+ I+ ++ +TGA I+V+P LP +T
Sbjct: 237 E-----------TFQMKIANNKVGLVIGKGGETIKSMQQKTGARIQVIPL-HLPAGDTST 284
Query: 289 DEMVQISGKP---NVAKRALYEVST 310
+ V I G P AK+ + EV++
Sbjct: 285 ERTVHIDGTPEQIESAKQLVIEVTS 309
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 15/160 (9%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERVIRASAFEGLWN 455
S KI G++G +IGK G ++ +Q ++GA I V +A + R + S +
Sbjct: 144 SKKIEIPNGRVGVIIGKAGETIRYIQLQSGAKIQVTRDHEAEPGALTRPVELSGNPDQIS 203
Query: 456 PRSQTIDAILQLQN---------KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMR 506
Q I +L + + + G T ++ + ++KVG ++G+GG I M+
Sbjct: 204 KAEQLIKEVLAEADAGSSGGGSGRKYNAPQPGGETFQMKIANNKVGLVIGKGGETIKSMQ 263
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
++T A I+V+ + D S+E V I G+ E + SA
Sbjct: 264 QKTGARIQVIPLHLPAGD---TSTERTVHIDGTPEQIESA 300
Score = 39.7 bits (91), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/36 (55%), Positives = 25/36 (69%), Gaps = 2/36 (5%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
F MKI + K+G VIGKGG +K +QQ+TGA I V
Sbjct: 239 FQMKIANN--KVGLVIGKGGETIKSMQQKTGARIQV 272
>gi|189528952|ref|XP_001923490.1| PREDICTED: RNA-binding protein Nova-1 isoform 1 [Danio rerio]
Length = 496
Score = 65.5 bits (158), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 113/480 (23%), Positives = 188/480 (39%), Gaps = 92/480 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
++L PS G +IGK G + L++ET A I ++ D PG+ ERV +I + +
Sbjct: 60 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT----VEA 115
Query: 188 QNKDDDSAAETKKE------SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
N D AE +E EP Q DR+ +
Sbjct: 116 LNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDRVKQ------------------- 156
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE-MVQISGKPNV 300
A+L+VPN+ G ++GK G ++ + ++GA +++ P +N E +V ISG+P
Sbjct: 157 AKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL----SQKPDGINLQERVVTISGEPEQ 212
Query: 301 AKRALYEVSTLLHQNPRKDK----PPSSFPQAYGGQN-FHSPPAPMADMHPLGNSSWPAR 355
++A+ + + ++P+ S+ N SP A A++ P ++ A
Sbjct: 213 NRKAVEIIVQKIQEDPQSSSCLNISYSNISGPVANSNPTGSPYANSAEVMPAAAAAAAAT 272
Query: 356 NSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGK 415
SSL G S + G G P+ M S S N ++ ++ L S G +G
Sbjct: 273 ASSLLGQAS---LAGVGAFPTTMSSFSGNDL-------LAITSALNTLASYGYNTNSLGL 322
Query: 416 G---------------GFNVKQLQQETGASIHVEDAPTDSDERVIRASAF---------- 450
G N + + DA T + F
Sbjct: 323 GLNPAAASGVLAAVAASANPAAAAAANLLASYANDASTSAGHPATSLGGFTLGSLAAATG 382
Query: 451 --EGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRR 508
G + S + + L K +E ++ + VP + VG ILG+GG + E +
Sbjct: 383 ATNGYLSAASPLVASSLLATEKLAEGAKD---VVEIAVPENLVGAILGKGGKTLVEYQEL 439
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGS------SEHLISAHGTYQSFMTSGQSMKV 562
T A I++ K + PG+ V I GS +++LIS TY+ + + KV
Sbjct: 440 TGARIQI----SKKGEFVPGTRNRKVTITGSPAATQAAQYLISQRITYEQGVRATNPQKV 495
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 67/234 (28%), Positives = 103/234 (44%), Gaps = 53/234 (22%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERV-IRASAFEG 452
E+ +K+L + G +IGKGG + QLQ+ETGA+I + +D + ERV + E
Sbjct: 56 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 115
Query: 453 LWN------------PRS-QTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGG 499
L N P+S Q + + LQ +T+ ++ +L+VP+S G I+G+GG
Sbjct: 116 LNNVHDFIAEKVREMPQSAQKTEPVSILQPQTTVNPDR-VKQAKLIVPNSTAGLIIGKGG 174
Query: 500 HVINEMRRRTQADIRVVGARVKLQDPHPGSS--ECIVDIRGSSEHLISAHGTYQSFMTSG 557
+ + ++ GA V+L G + E +V I G E
Sbjct: 175 ATVKAVMEQS-------GAWVQLSQKPDGINLQERVVTISGEPE---------------- 211
Query: 558 QSMKVQPSSYQNI--NPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQN 609
Q+ K Q I +PQ SSC + SY N++ P N SPY N
Sbjct: 212 QNRKAVEIIVQKIQEDPQSSSCLNI-----SYSNIS---GPVANSNPTGSPYAN 257
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 46/78 (58%), Gaps = 4/78 (5%)
Query: 470 KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS 529
K + E+G ++L+PS G I+G+GG I ++++ T A I++ K +D +PG+
Sbjct: 47 KRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL----SKSKDFYPGT 102
Query: 530 SECIVDIRGSSEHLISAH 547
+E + I+G+ E L + H
Sbjct: 103 TERVCLIQGTVEALNNVH 120
>gi|149728835|ref|XP_001494599.1| PREDICTED: poly(rC)-binding protein 4-like isoform 1 [Equus
caballus]
Length = 403
Score = 65.5 bits (158), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 88/190 (46%), Gaps = 34/190 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPTNGGSVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRK 318
++ ++P K
Sbjct: 167 CAVILESPPK 176
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/174 (24%), Positives = 77/174 (44%), Gaps = 28/174 (16%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYSSPTKIAKTQ 188
R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + + P I
Sbjct: 104 LRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSGVPDAIILCV 163
Query: 189 NKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGGMASDD----------- 233
+ E+ + P + LL + + +G + S +
Sbjct: 164 RQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTSAEVTKLQQLSGHA 223
Query: 234 ------------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
D T + LVPN+++GC++G++G I +R +GA+I++
Sbjct: 224 VPFASPSMVPGLDPGAQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKI 277
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPTNGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
>gi|326430629|gb|EGD76199.1| hypothetical protein PTSG_00905 [Salpingoeca sp. ATCC 50818]
Length = 947
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/335 (21%), Positives = 138/335 (41%), Gaps = 71/335 (21%)
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
+ E+ + ++++P MVG L+G+ G I+ + +GA I +LP P M+ +V+
Sbjct: 269 EAEDRITSIQMMIPGEMVGHLIGRAGASIKYITETSGAGIELLPLQY--PANMSPVRIVK 326
Query: 294 ISGKPNVAKRA----LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
I G P A L + S + ++ + P Q AP
Sbjct: 327 IEGTPRQLTHAFALMLRKFSNAMRRSMEVMRGPPMMGMMQQQQQQMPGMAP--------- 377
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
P++ GYG PG M E + + A +
Sbjct: 378 ----------------PYVPGYG---------------PGPMMMAPVEV-ITVRVPAWSV 405
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAIL-QLQ 468
G +IG+GG N+K + +ETGA I ++++ D +E + R G + + I ++Q
Sbjct: 406 GALIGRGGSNIKHMMEETGAEIRIQNSGDDVEEPLERDCVVRGTTEQQVRAHALIFRRMQ 465
Query: 469 NKTSEFS-------EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVK 521
++ + + + VP++KVG ++G+GG I +++++T VG V+
Sbjct: 466 DEQARLNIPPTDPRSNDLFPVVMEVPAAKVGRVIGRGGATIRDIQQKTG-----VGVEVQ 520
Query: 522 LQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS 556
+ +P ++ ++ HG+Y+S +
Sbjct: 521 QNEENPEANAAVM-----------LHGSYRSVQAA 544
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 70/157 (44%), Gaps = 13/157 (8%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPR 457
F ++++ +G +IG+GG N++QL Q + A + +E V R +G N
Sbjct: 186 FPVQLVVRPSLVGAIIGRGGANIRQLSQVSRARVELERRDPHLGA-VGRRVFIDGSLNNT 244
Query: 458 SQTIDAILQLQ-------NKTSEFSEKGTITT-RLLVPSSKVGCILGQGGHVINEMRRRT 509
+ A++QL N + IT+ ++++P VG ++G+ G I + +
Sbjct: 245 VEAFRALVQLMADNDVELNGEEPVEAEDRITSIQMMIPGEMVGHLIGRAGASIKYITETS 304
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
A I + + LQ P S IV I G+ L A
Sbjct: 305 GAGIEL----LPLQYPANMSPVRIVKIEGTPRQLTHA 337
>gi|410914634|ref|XP_003970792.1| PREDICTED: RNA-binding protein Nova-1-like [Takifugu rubripes]
Length = 501
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 109/483 (22%), Positives = 193/483 (39%), Gaps = 99/483 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
++L PS G +IGK G + L++ET A I ++ D PG+ ERV +I + +
Sbjct: 66 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEALNGV 125
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
N + E + + +P ++L+ + N + A+++VP
Sbjct: 126 HNFIAEKVREMPQSAQKPEPV---SILQPQTTV--------------NPDRVKQAKIIVP 168
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE-MVQISGKPNVAKRALY 306
N+ G ++GK G ++ + ++GA +++ P +N E +V ISG+P ++A+
Sbjct: 169 NSTAGLIIGKGGATVKAVMEQSGAWVQL----SQKPEGINLQERVVTISGEPEQNRKAVE 224
Query: 307 EVSTLLHQNPRKDKPPS-SFPQAYG----GQNFHSPPAPMADMHP--------------- 346
+ + ++P+ + S+ G SP A AD+ P
Sbjct: 225 IIVQKIQEDPQSSSCLNISYSNVSGPVANSNPTGSPYANTADVLPNAAAAAATASSLLGQ 284
Query: 347 ---LGNSSWPARNSSLHG------MPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAE 397
G ++PA SSL G + + YG + +G G + G + V+A
Sbjct: 285 AGLTGMGAFPAAMSSLSGNDLLAITSALNTLASYGYNTNTLGLGLNPAAASGVLAAVAAS 344
Query: 398 FSMKILCSAGKIGGV------------IGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+ +A + G GGF++ L TGAS
Sbjct: 345 ANPAAAAAANLLASYASDASSSAGHPSTGLGGFSLGSLAAATGAS--------------- 389
Query: 446 RASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
G N S + + L K ++ ++ + VP + VG ILG+GG + E
Sbjct: 390 -----NGYLNASSPLMASSLLATEKLADGAKD---VVEIAVPENLVGAILGKGGKTLVEY 441
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS------SEHLISAHGTYQSFMTSGQS 559
+ T A I++ K + PG+ V I GS +++LIS TY+ + +
Sbjct: 442 QELTGARIQI----SKKGEFIPGTRNRKVTITGSPAATQAAQYLISQRITYEQGVRATNP 497
Query: 560 MKV 562
KV
Sbjct: 498 QKV 500
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 100/233 (42%), Gaps = 51/233 (21%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERVI----RASA 449
E+ +K+L + G +IGKGG + QLQ+ETGA+I + +D + ERV A
Sbjct: 62 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 121
Query: 450 FEGLWNPRSQTIDAILQLQNK---TSEFSEKGTIT------TRLLVPSSKVGCILGQGGH 500
G+ N ++ + + Q K S + T+ +++VP+S G I+G+GG
Sbjct: 122 LNGVHNFIAEKVREMPQSAQKPEPVSILQPQTTVNPDRVKQAKIIVPNSTAGLIIGKGGA 181
Query: 501 VINEMRRRTQADIRVVGARVKLQDPHPGSS--ECIVDIRGSSEHLISAHGTYQSFMTSGQ 558
+ + ++ GA V+L G + E +V I G E Q
Sbjct: 182 TVKAVMEQS-------GAWVQLSQKPEGINLQERVVTISGEPE----------------Q 218
Query: 559 SMKVQPSSYQNI--NPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQN 609
+ K Q I +PQ SSC + SY N++ P N SPY N
Sbjct: 219 NRKAVEIIVQKIQEDPQSSSCLNI-----SYSNVS---GPVANSNPTGSPYAN 263
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 470 KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS 529
K + E+G ++L+PS G I+G+GG I ++++ T A I++ K +D +PG+
Sbjct: 53 KRTNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL----SKSKDFYPGT 108
Query: 530 SECIVDIRGSSEHLISAH 547
+E + I+G+ E L H
Sbjct: 109 TERVCLIQGTVEALNGVH 126
>gi|442634098|ref|NP_001262198.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
gi|440216175|gb|AGB94891.1| mushroom-body expressed, isoform L [Drosophila melanogaster]
Length = 368
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 151/345 (43%), Gaps = 59/345 (17%)
Query: 110 NWSNSSREQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
N S+S+ S + P+ T+ R++ +++G +IGK G IV REE+ AKI ++D
Sbjct: 5 NTSSSAGGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--- 61
Query: 169 GS-EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
GS ER++ + + I SA + E C+ + + KV
Sbjct: 62 GSCPERIVTVSGTTNAIF--------SAFTLITKKFEEWCSQFNDVGKVGK--------- 104
Query: 228 GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMN 287
+ I RL+VP + G L+GK G I+ +R TG +I+V ++ LP +
Sbjct: 105 ----------TQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV-ASEMLPN---S 150
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQN-------PRKDKPPSSFP------QAYGGQNF 334
T+ V +SG + +Y++ ++ ++ P + KP + P QA+ Q
Sbjct: 151 TERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANGQAFTIQGN 210
Query: 335 HSPPAPMADMHPLGNSSWPARN----SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQ 390
++ P +PL + + +S G+ T G + + + + P
Sbjct: 211 YAVPTQEVAKNPLASLAALGLAGMNPASTGGINHT---GSAPAALAALAGSQLRTANPAN 267
Query: 391 MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
+ + ++ S IG +IGKGG + +++Q +GA I + +
Sbjct: 268 RAQ---QQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 309
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G V + ++E+GA I++ D ER++ S G
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVS---GTT 75
Query: 455 NPRSQTIDAILQ-LQNKTSEFSEKGT-----ITTRLLVPSSKVGCILGQGGHVINEMRRR 508
N I + + S+F++ G I RL+VP+S+ G ++G+ G I E+R+
Sbjct: 76 NAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQT 135
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
T I+V + P S+E V + GS+E +
Sbjct: 136 TGCSIQVASEML------PNSTERAVTLSGSAEQI 164
Score = 43.5 bits (101), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ V N+++GC++GK G I +R +GA IR+ + NTD + ISG P+
Sbjct: 276 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERE--GGNTDRTITISGNPDSVAL 333
Query: 304 ALYEVS 309
A Y ++
Sbjct: 334 AQYLIN 339
>gi|169844143|ref|XP_001828793.1| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
gi|116510164|gb|EAU93059.1| cytoplasmic protein [Coprinopsis cinerea okayama7#130]
Length = 343
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/247 (26%), Positives = 103/247 (41%), Gaps = 54/247 (21%)
Query: 125 PADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTK 183
P +T+ R L ++ G +IGKAG V LRE+T K V+ I G ERV+ + S
Sbjct: 24 PNETLTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIAGVHERVLTVTGSVEA 83
Query: 184 IAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG--MASDDDNENSTIT 241
+AK N +I L A + N +
Sbjct: 84 VAKAYN------------------------------LIISQLVSSNPAAPPASSSNVHTS 113
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVA 301
RLL+ +N++G ++G+ G I+ ++ +GA + V + LP +T+ +V++ G P
Sbjct: 114 IRLLISHNLMGTIIGRNGLKIKAIQDNSGARM-VASKEMLP---QSTERVVEVQGSPEAI 169
Query: 302 KRALYEV-------------STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG 348
RA+ E+ + L H P D+ S+ GGQ S P P G
Sbjct: 170 GRAVEEIGKCLLEDWERGLGTVLFHPGPHDDRSRSN----RGGQYSGSYPTGGGSRRPNG 225
Query: 349 NSSWPAR 355
+S+ AR
Sbjct: 226 DSANRAR 232
Score = 44.3 bits (103), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 71/148 (47%), Gaps = 8/148 (5%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLWNP 456
+++ L S G +IGK G NV L+++TG V ERV+ + + E +
Sbjct: 28 LTLRALVSTKDAGVIIGKAGKNVADLREQTGVKAGVSKVIAGVHERVLTVTGSVEAVAKA 87
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITT-RLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ I ++ S T+ RLL+ + +G I+G+ G I ++ + A R+
Sbjct: 88 YNLIISQLVSSNPAAPPASSSNVHTSIRLLISHNLMGTIIGRNGLKIKAIQDNSGA--RM 145
Query: 516 VGARVKLQDPHPGSSECIVDIRGSSEHL 543
V ++ L P S+E +V+++GS E +
Sbjct: 146 VASKEML----PQSTERVVEVQGSPEAI 169
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%), Gaps = 4/66 (6%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R +G+ I + A P + M I G P
Sbjct: 254 TQNISIPSDMVGCIIGRSGTKITEIRRLSGSKISIAKA----PHDDTGERMFTIVGTPEA 309
Query: 301 AKRALY 306
++AL+
Sbjct: 310 NEKALF 315
>gi|56090186|ref|NP_001007777.1| far upstream element-binding protein 3 [Danio rerio]
gi|55715803|gb|AAH85379.1| Zgc:101598 [Danio rerio]
Length = 572
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/194 (23%), Positives = 91/194 (46%), Gaps = 31/194 (15%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA--DTIPGSEERVIIIYSSPTKIA 185
V IL P+ K+G VIGK G+ +K L+E T K+ + D +P ++ + I P K+
Sbjct: 169 AVQEILIPASKVGLVIGKGGDTIKQLQERTGVKMIMIQDDPMPTGSDKPLRISGDPYKVQ 228
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
+ A++ ++++ + D G + S+I +
Sbjct: 229 Q----------------------ARELVVEIIREKDQGDFRSGRSDFGSRLGSSID--VA 264
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP VG ++G+ G++I++++++ G I+ P D + P D + Q+ G+P + A+
Sbjct: 265 VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----DRVAQVMGQPERCQHAV 319
Query: 306 YEVSTLLHQNPRKD 319
+ ++ L+ +D
Sbjct: 320 HLINELVQTAQERD 333
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 112/545 (20%), Positives = 194/545 (35%), Gaps = 138/545 (25%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G +R + +P I +
Sbjct: 90 VPDKMVGFIIGRGGEQITRIQLESNCKIQIAADSGGMMDRPCTLTGTPESIEQ------- 142
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
A+ L ++ DR G + S+ +L+P + VG
Sbjct: 143 ---------------AKRLLGQIVDRCRN-----GPGFHSQMDGSSAVQEILIPASKVGL 182
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK GD I++L+ TG + ++ D +P +D+ ++ISG P ++A V ++
Sbjct: 183 VIGKGGDTIKQLQERTGVKMIMIQDDPMP---TGSDKPLRISGDPYKVQQARELVVEIIR 239
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D F S G D
Sbjct: 240 EKDQGD--------------FRS---------------------------------GRSD 252
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SR+GS SI+ P F++ I VIG+ G +K++Q + G I
Sbjct: 253 FGSRLGS-SIDVAVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 294
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEK---------------- 477
+ S +RV + I+ ++Q + F
Sbjct: 295 KPDDGISPDRVAQVMGQPERCQHAVHLINELVQTAQERDGFGGPLGPRGRGRGRGDWNIG 354
Query: 478 ---GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ-DPHPGSSECI 533
G +P+ K G ++G+GG I + +++ GA V+LQ +P P + +
Sbjct: 355 TPGGLQEVTYTIPADKCGLVIGKGGETIKNINQQS-------GAHVELQRNPPPNTDPNV 407
Query: 534 --VDIRGSSEHLISAHGTYQ-----SFMTSGQSMKVQPSSYQNINPQQSSCQTM--SSHQ 584
IRGS + + A S M S + P + P Q+ QT
Sbjct: 408 RTFSIRGSPQQMEMARQLIDDKIGASGMGGNSSFGLSPFTQGPATPHQNGPQTFMTGGWG 467
Query: 585 SSYQNM--NTQQSPYHRVNAQQSPYQNINPQQSSYPM---HTHQGAGTNPHITPTQSSYY 639
++YQ +QQ P H N QS + + Y +QG + P + YY
Sbjct: 468 TTYQTWQPQSQQDPSH--NGSQSGQMDYSKAWEQYYKKLGQQNQGQSSGPDYSKAWEEYY 525
Query: 640 SSSAQ 644
Q
Sbjct: 526 KKQTQ 530
>gi|242785360|ref|XP_002480578.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
gi|218720725|gb|EED20144.1| KH domain RNA-binding protein [Talaromyces stipitatus ATCC 10500]
Length = 367
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 137/317 (43%), Gaps = 46/317 (14%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R + S++ G +IGKAG V LR+ET K V+ + G +RV+ + + A+
Sbjct: 50 LRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGALQGCARA-- 107
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
+ LL+ ++ GG+ + N T RLL+ +N
Sbjct: 108 ----------------YSIVAKGLLEGAPQV----GMGGVVQN----NGTHPIRLLISHN 143
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 144 QMGTIIGRQGLKIKHIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAVWEIG 199
Query: 310 TLLHQNPRKD------KPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
L + ++ P GQ H+ D + N + +G
Sbjct: 200 KCLIDDWQRGTGTVLYNPAVRVSIGGSGQLNHN-----GDRTGGSYGGGRSYNRTGNGAD 254
Query: 364 STPWMGGYGDQPSRMGSG-SINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+ GGY +R GSG + N P + + I A +G +IG+GG + +
Sbjct: 255 FSEPSGGY----NRRGSGDNGNRNLPLVTDDGEEVQTQNISIPADMVGCIIGRGGSKISE 310
Query: 423 LQQETGASIHVEDAPTD 439
+++ +GA I + AP D
Sbjct: 311 IRRSSGARISIAKAPHD 327
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 78/171 (45%), Gaps = 10/171 (5%)
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
SG + P A +++ + S+ + G +IGK G NV L+ ETG V
Sbjct: 30 SGELEEQPKTDEEYAQAILTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQG 89
Query: 440 SDERVIRAS-AFEGLWNPRSQTIDAILQLQNKTSE---FSEKGTITTRLLVPSSKVGCIL 495
+RV+ + A +G S +L+ + GT RLL+ +++G I+
Sbjct: 90 VHDRVLTVTGALQGCARAYSIVAKGLLEGAPQVGMGGVVQNNGTHPIRLLISHNQMGTII 149
Query: 496 GQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
G+ G I + + + +R+V + L P S+E IV+++G+ E + A
Sbjct: 150 GRQGLKIKHI--QDASGVRMVAQKEML----PQSTERIVEVQGTPEGIEKA 194
Score = 43.9 bits (102), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 10/92 (10%)
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+ +DD E T + +P +MVGC++G+ G I +R +GA I + A P
Sbjct: 277 LVTDDGEE--VQTQNISIPADMVGCIIGRGGSKISEIRRSSGARISIAKA----PHDETG 330
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQNPRKDK 320
+ M I G ++ALY LL++N +K
Sbjct: 331 ERMFTIMGSAQANEKALY----LLYENLEAEK 358
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +P+ VGCI+G+GG I+E+RR + A I + A PH + E + I GS+
Sbjct: 287 TQNISIPADMVGCIIGRGGSKISEIRRSSGARISIAKA------PHDETGERMFTIMGSA 340
Query: 541 E 541
+
Sbjct: 341 Q 341
>gi|383849051|ref|XP_003700160.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like
[Megachile rotundata]
Length = 460
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 92/230 (40%), Gaps = 45/230 (19%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQP------ADTVYRILCPSRKIGGVIGKAGN 148
N + R V GI K + S G + P D R+L PS+ G +IGK G
Sbjct: 8 NVENNRVPVAGIMKREADAGAMTGSGGPTSPHKRYRQGDDELRLLIPSKVAGSIIGKGGQ 67
Query: 149 IVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCA 208
+ LR + +A I V D PG E + I PT
Sbjct: 68 NITKLRSQYKASIIVPDC-PGPERVLTISSDLPT-------------------------- 100
Query: 209 AQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSE 268
+L+V + ++ G D I R+LV + GC++GK G I+ LR +
Sbjct: 101 ----VLQVLNEVVPNLEENGSRHGSDE----IDVRMLVHQSQAGCIIGKGGLKIKELREK 152
Query: 269 TGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRK 318
TGA I++ C +TD ++ I GKP+ + E+ + +P K
Sbjct: 153 TGARIKIYSH----CCPHSTDRLISICGKPSTCIDCIRELIATIKTSPLK 198
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 66/127 (51%), Gaps = 19/127 (14%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
+ +++L + G +IGKGG N+ +L+ + ASI V D P ERV+ S+
Sbjct: 45 GDDELRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDCP--GPERVLTISS------ 96
Query: 456 PRSQTIDAILQLQNKTS-EFSEKGT------ITTRLLVPSSKVGCILGQGGHVINEMRRR 508
+ +LQ+ N+ E G+ I R+LV S+ GCI+G+GG I E+R +
Sbjct: 97 ----DLPTVLQVLNEVVPNLEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREK 152
Query: 509 TQADIRV 515
T A I++
Sbjct: 153 TGARIKI 159
Score = 45.4 bits (106), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 37/68 (54%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
GN T ++ P G +IGK G ++ +R ++ A IT+ + +PGS +R+I I
Sbjct: 379 GNMGSNKTSTQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITIDEPLPGSNDRIITITGL 438
Query: 181 PTKIAKTQ 188
P++I Q
Sbjct: 439 PSQIQMAQ 446
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 43/75 (57%), Gaps = 5/75 (6%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
+ ++ +P ++ G ++GK G I+++RS++GA I + P + D ++ I+G P+
Sbjct: 387 STQVTIPKDLAGAIIGKGGARIRKIRSDSGAGITI-----DEPLPGSNDRIITITGLPSQ 441
Query: 301 AKRALYEVSTLLHQN 315
+ A Y + +H+N
Sbjct: 442 IQMAQYLLQQSVHEN 456
>gi|118486946|gb|ABK95306.1| unknown [Populus trichocarpa]
Length = 313
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 77/312 (24%), Positives = 119/312 (38%), Gaps = 79/312 (25%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKI 184
T ++L + G VIGK G + + ++ A+I ++ + PG+ +R+I+I
Sbjct: 35 TYIKLLVSNAAAGSVIGKGGATITDFQSQSGARIQLSKNYEFFPGTSDRIILI------- 87
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
D LK + II + L D D+ + RL
Sbjct: 88 ----------------------SGGIDDALKALELIIAKLLSEIPTEDGDDAEPRMRVRL 125
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
+VPNN G ++GK G +I+ E+ A I++ P D TD +V I+G
Sbjct: 126 VVPNNACGSIIGKGGSIIKSFIEESHAGIKISPLD--TDFLGLTDRLVAITG-------- 175
Query: 305 LYEVSTLLHQNPRKDKPPSSFP-QAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
TL Q D S + QN H+P + A A NS+ HG
Sbjct: 176 -----TLEEQMHAIDLILSKLTDDTHYLQNMHAPLSYAA-----------AYNSTNHG-- 217
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
+ G G + NS G E IG V+G+GG N+ ++
Sbjct: 218 ----LNGAGVKFQHNKEDRTNSVTIGVADE--------------HIGLVVGRGGRNIMEI 259
Query: 424 QQETGASIHVED 435
Q +GA I + D
Sbjct: 260 SQNSGARIKISD 271
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 71/160 (44%), Gaps = 20/160 (12%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV----EDAPTDSDERVIRASAFEGLWN 455
+K+L S G VIGKGG + Q ++GA I + E P SD ++ + +
Sbjct: 37 IKLLVSNAAAGSVIGKGGATITDFQSQSGARIQLSKNYEFFPGTSDRIILISGGIDDALK 96
Query: 456 PRSQTIDAIL-QLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
I +L ++ + + +E + RL+VP++ G I+G+GG +I + A I+
Sbjct: 97 ALELIIAKLLSEIPTEDGDDAEP-RMRVRLVVPNNACGSIIGKGGSIIKSFIEESHAGIK 155
Query: 515 VVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFM 554
+ S D G ++ L++ GT + M
Sbjct: 156 I--------------SPLDTDFLGLTDRLVAITGTLEEQM 181
>gi|402086578|gb|EJT81476.1| Poly(rC)-binding protein 3 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 486
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 89/372 (23%), Positives = 150/372 (40%), Gaps = 86/372 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S + VIGK G V +R+ + AK TV+D G+ ER++ +
Sbjct: 129 RAVISSPEAATVIGKGGENVSKIRQLSGAKCTVSDYQKGAVERILTV------------- 175
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
DA+ K II ++ + T RLL+P+ +
Sbjct: 176 ----------------SGIVDAVAKAFGLIIRTLNNEPLSDASSAHSKTYPLRLLIPHIL 219
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV-S 309
+G ++GK G I+ ++ +GA R+ +D P ++++ + + G + A Y V S
Sbjct: 220 IGSIIGKGGARIKEIQEASGA--RLNASDSCLP--LSSERSLVVMGVADAVHIATYYVGS 275
Query: 310 TLLHQ-NPRKDKPPSS----------------------FPQAYGG-----QNFHSPPAPM 341
TLL Q N R P +S PQ GG +N+ P P
Sbjct: 276 TLLEQLNDRFGGPAASAYATRAGGPVGAVPGGMQVVPYLPQPAGGNFGNRENYGRRPDPR 335
Query: 342 ADMHPLGNSSWPARNSSLHG----MPSTPWM-----GGYGD--QPSRMGSGS--INSCP- 387
A P G + A++ + H P+ P G YG QP +G ++ P
Sbjct: 336 AGPVPQGAAVPYAQHYNPHAAHQPTPAVPVHYGAQGGAYGAHVQPPHVGHAGPQVHGAPH 395
Query: 388 --------PGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
PG G S + +I +G +IGKGG + +++Q +G+ I + + +
Sbjct: 396 QQPMHSQMPGPGGAQS--LTQQIYIPNDMVGAIIGKGGTKINEIRQISGSVIKINEPQDN 453
Query: 440 SDERVIRASAFE 451
S+ER++ + E
Sbjct: 454 SNERLVTITGTE 465
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 66/134 (49%), Gaps = 14/134 (10%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
+A ++ + S+ + VIGKGG NV +++Q +GA V D + ER++ S G+
Sbjct: 123 TAWIHIRAVISSPEAATVIGKGGENVSKIRQLSGAKCTVSDYQKGAVERILTVS---GIV 179
Query: 455 NPRSQTIDAILQLQNKT----SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
+ ++ I++ N + + T RLL+P +G I+G+GG I E++ +
Sbjct: 180 DAVAKAFGLIIRTLNNEPLSDASSAHSKTYPLRLLIPHILIGSIIGKGGARIKEIQEAS- 238
Query: 511 ADIRVVGARVKLQD 524
GAR+ D
Sbjct: 239 ------GARLNASD 246
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 7/63 (11%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
++T ++ +P+ VG I+G+GG INE+R ++ G+ +K+ +P S+E +V I G
Sbjct: 411 SLTQQIYIPNDMVGAIIGKGGTKINEIR-------QISGSVIKINEPQDNSNERLVTITG 463
Query: 539 SSE 541
+ E
Sbjct: 464 TEE 466
>gi|218189965|gb|EEC72392.1| hypothetical protein OsI_05673 [Oryza sativa Indica Group]
gi|222622089|gb|EEE56221.1| hypothetical protein OsJ_05205 [Oryza sativa Japonica Group]
Length = 442
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/197 (26%), Positives = 95/197 (48%), Gaps = 32/197 (16%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVAD-TIPGSEERVIIIYSSPTK 183
P +V+R++ + K+GG+IG+ G+ +K L E+T+A++ V + + R+++I
Sbjct: 94 PGASVFRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVLI------ 147
Query: 184 IAKTQNKDDDSAAETKKESMEPHCAAQDALLKV--HDRIIE----EDLFGGMASDDDNEN 237
SA E + + P A DA +K+ H IE +D G A +
Sbjct: 148 ----------SATEESQAELPP---AMDAAIKIFMHINDIEKINCDDTLSGSAPE----- 189
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
+A+LLVP+ L+GK+G I+ ++ TGA ++++ L + + +V I G
Sbjct: 190 -KCSAKLLVPSAQATHLIGKQGVRIKSIQETTGATVKIIDKVELLSYDVVDERIVDIHGA 248
Query: 298 PNVAKRALYEVSTLLHQ 314
P AL V +L +
Sbjct: 249 PLKVLHALKSVLGVLRK 265
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 85/172 (49%), Gaps = 18/172 (10%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERVIRASAFEGLWNPRS 458
+++ + K+GG+IG+ G +K+L ++T A + V E A + R++ SA E
Sbjct: 99 FRLVVATDKVGGLIGRRGDTIKRLCEDTRARVRVLEAAAAAAANRIVLISATEESQAELP 158
Query: 459 QTIDAILQL---QNKTSEFSEKGTI--------TTRLLVPSSKVGCILGQGGHVINEMRR 507
+DA +++ N + + T+ + +LLVPS++ ++G+ G I ++
Sbjct: 159 PAMDAAIKIFMHINDIEKINCDDTLSGSAPEKCSAKLLVPSAQATHLIGKQGVRIKSIQE 218
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI----SAHGTYQSFMT 555
T A ++++ +V+L + E IVDI G+ ++ S G + F+
Sbjct: 219 TTGATVKIID-KVELLS-YDVVDERIVDIHGAPLKVLHALKSVLGVLRKFLV 268
Score = 38.9 bits (89), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 42/185 (22%), Positives = 77/185 (41%), Gaps = 36/185 (19%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP-----GSE 171
+ + S P ++L PS + +IGK G +KS++E T A + + D + +
Sbjct: 180 DDTLSGSAPEKCSAKLLVPSAQATHLIGKQGVRIKSIQETTGATVKIIDKVELLSYDVVD 239
Query: 172 ERVIIIYSSPTKIA-----------------------KTQNKDDDSAAETKKESMEPHCA 208
ER++ I+ +P K+ + +N+ A + KE+ + +
Sbjct: 240 ERIVDIHGAPLKVLHALKSVLGVLRKFLVDHGVLHLFERKNQAVGEAHDNSKEN-QVNQV 298
Query: 209 AQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSE 268
A D L V+ I+ D + N IT + +P ++G RG I +RS
Sbjct: 299 ASDYRLPVNKDILLPDHRTPL-------NPKITQTMQIPLPFAEEIIGARGQNISYIRSV 351
Query: 269 TGANI 273
+GA +
Sbjct: 352 SGAVV 356
>gi|328781397|ref|XP_392536.4| PREDICTED: heterogeneous nuclear ribonucleoprotein K [Apis
mellifera]
Length = 482
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 90/221 (40%), Gaps = 42/221 (19%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
KR+ G G+ +S + + + D R+L PS+ G +IGK G + LR +
Sbjct: 55 MKREADAGAMTGSGGPTSPHKRY---RQGDDELRLLIPSKVAGSIIGKGGQNITKLRSQY 111
Query: 158 QAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVH 217
+A I V D PG E + I PT +L+V
Sbjct: 112 KASIIVPDC-PGPERVLTISSDLPT------------------------------VLQVL 140
Query: 218 DRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLP 277
+ ++ G D I R+LV + GC++GK G I+ LR +TGA I++
Sbjct: 141 NEVVPNLEENGSRHGSDE----IDVRMLVHQSQAGCIIGKGGLKIKELREKTGARIKIYS 196
Query: 278 ADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRK 318
C +TD ++ I GKP + E+ + +P K
Sbjct: 197 H----CCPHSTDRLISICGKPTTCIECIRELIATIKTSPLK 233
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 65/123 (52%), Gaps = 19/123 (15%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+++L + G +IGKGG N+ +L+ + ASI V D P ERV+ S+
Sbjct: 84 LRLLIPSKVAGSIIGKGGQNITKLRSQYKASIIVPDCP--GPERVLTISS---------- 131
Query: 460 TIDAILQLQNKTS-EFSEKGT------ITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ +LQ+ N+ E G+ I R+LV S+ GCI+G+GG I E+R +T A
Sbjct: 132 DLPTVLQVLNEVVPNLEENGSRHGSDEIDVRMLVHQSQAGCIIGKGGLKIKELREKTGAR 191
Query: 513 IRV 515
I++
Sbjct: 192 IKI 194
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T ++ +P ++ G ++GK G I+++RS++GA I + P + + D ++ I+G P+
Sbjct: 409 TTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITI-----DEPLSGSNDRIITITGLPSQ 463
Query: 301 AKRALYEVSTLLHQN 315
+ A Y + +H+N
Sbjct: 464 IQMAQYLLQQSVHEN 478
Score = 40.8 bits (94), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 34/61 (55%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
T ++ P G +IGK G ++ +R ++ A IT+ + + GS +R+I I P++I
Sbjct: 408 TTTQVTIPKDLAGAIIGKGGARIRKVRSDSGAGITIDEPLSGSNDRIITITGLPSQIQMA 467
Query: 188 Q 188
Q
Sbjct: 468 Q 468
>gi|340959534|gb|EGS20715.1| hypothetical protein CTHT_0025510 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 373
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/320 (23%), Positives = 133/320 (41%), Gaps = 66/320 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R L S++ G +IGK G V +LREET K V+ + G +RV+ I +++
Sbjct: 54 RALVSSKEAGVIIGKGGQNVANLREETGVKAGVSKVVQGVYDRVLTITGGCDAVSRA--- 110
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ ALL+ + GG+ N T +LL+ +N
Sbjct: 111 ---------------YAVVARALLEGAPAV----SMGGVV----QHNGTHPIKLLISHNQ 147
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P +RA++E+
Sbjct: 148 MGTIIGRQGQRIKYIQDVSG--VRMVAQKEMLP--QSTERIVEVQGTPEGIQRAVWEICK 203
Query: 311 LL-----------HQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
L NP F YG + + AD G+ S+ R S
Sbjct: 204 CLVDDWQRGTGTVFYNPAVRTQVGGFHDRYGSRVLRTGNG--ADFSN-GSRSY-GRRSDS 259
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
G P P P+ +G E+ + I A +G +IG+GG
Sbjct: 260 EGGPRGP--------PTHDENGE----------EIQTQ---NISIPADMVGCIIGRGGSK 298
Query: 420 VKQLQQETGASIHVEDAPTD 439
+ ++++ +GA I + AP D
Sbjct: 299 ISEIRKTSGARISIAKAPHD 318
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/220 (22%), Positives = 89/220 (40%), Gaps = 40/220 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKIAKT-- 187
++L ++G +IG+ G +K +++ + ++ + +P S ER++ + +P I +
Sbjct: 140 KLLISHNQMGTIIGRQGQRIKYIQDVSGVRMVAQKEMLPQSTERIVEVQGTPEGIQRAVW 199
Query: 188 ---QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASD------------ 232
+ DD T P A + + HDR L G +D
Sbjct: 200 EICKCLVDDWQRGTGTVFYNP--AVRTQVGGFHDRYGSRVLRTGNGADFSNGSRSYGRRS 257
Query: 233 ------------DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
D+N T + +P +MVGC++G+ G I +R +GA I + A
Sbjct: 258 DSEGGPRGPPTHDENGEEIQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISIAKA-- 315
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK 320
P + M I G + AL+ LL++N +K
Sbjct: 316 --PHDETGERMFTIMGTAKANETALF----LLYENLEAEK 349
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 75/151 (49%), Gaps = 10/151 (6%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLWN 455
+ +++ L S+ + G +IGKGG NV L++ETG V +RV+ + + +
Sbjct: 50 QLTLRALVSSKEAGVIIGKGGQNVANLREETGVKAGVSKVVQGVYDRVLTITGGCDAVSR 109
Query: 456 PRSQTIDAILQLQNKTSE---FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ A+L+ S GT +LL+ +++G I+G+ G I + + +
Sbjct: 110 AYAVVARALLEGAPAVSMGGVVQHNGTHPIKLLISHNQMGTIIGRQGQRIKYI--QDVSG 167
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+R+V + L P S+E IV+++G+ E +
Sbjct: 168 VRMVAQKEML----PQSTERIVEVQGTPEGI 194
>gi|238836386|gb|ACR61401.1| IGF-II mRNA-binding protein 2a variant B [Danio rerio]
Length = 542
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 98/425 (23%), Positives = 169/425 (39%), Gaps = 95/425 (22%)
Query: 114 SSREQ---------SFGNSQPA-DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
+SREQ S G+ Q D R+L P++ +G +IGK G +K++ ++TQ+K+ +
Sbjct: 174 TSREQDSQPGTSGSSLGSRQKQPDFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDI 233
Query: 164 -ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIE 222
G+ E+ I I+S+P E C + D I++
Sbjct: 234 HRKENAGAAEKPITIHSTP-------------------EGCSTACHM------IMD-IMQ 267
Query: 223 EDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
++ ++D I ++L N++VG L+GK G ++++ +T I + L
Sbjct: 268 KEAVDTKVTED------IPLKILAHNSLVGRLIGKEGRNLKKIEEDTETKITISSLQDL- 320
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPP-------------------- 322
N + + + G RA E+ L + D
Sbjct: 321 -TIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQQSNLIPGLSLSALGIFS 379
Query: 323 ---SSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMG 379
S P A G + PP P P G + + +S L G+ P G Q
Sbjct: 380 TGLSVLPPAAGPRGI--PPVP-----PTGYNPFLGHSSQLGGLYGVPPASGISHQ----- 427
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
++ P Q EV + + +G +IGK G ++KQL + GASI + AP +
Sbjct: 428 ----HTQAPEQ--EV-----VYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--APAE 474
Query: 440 SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS--EKGTITTRLLVPSSKVGCILGQ 497
S + R G + + I + + F+ E+ + T + VPSS G ++G+
Sbjct: 475 SPDVTQRMVIITGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGK 534
Query: 498 GGHVI 502
GG +
Sbjct: 535 GGKTV 539
>gi|410982764|ref|XP_003997718.1| PREDICTED: RNA-binding protein Nova-2 [Felis catus]
Length = 372
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/317 (22%), Positives = 137/317 (43%), Gaps = 34/317 (10%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIY 178
+ + + ++L PS G +IGK G + L++ET A I ++ D PG+ ERV ++
Sbjct: 35 DGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQ 94
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+ A+ N AE +E P + ++ + N +
Sbjct: 95 GT----AEALNAVHSFIAEKVREI--PQAMTKPEVVNILQ-----------PQTTMNPDR 137
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE-MVQISGK 297
A+L+VPN+ G ++GK G ++ + ++GA +++ P +N E +V +SG+
Sbjct: 138 AKQAKLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL----SQKPEGINLQERVVTVSGE 193
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN-SSWPARN 356
P +A+ + + ++P+ S +Y + P+A+ +P G+ + PA
Sbjct: 194 PEQVHKAVSAIVQKVQEDPQSS---SCLNISYA-----NVAGPVANSNPTGSPYASPADV 245
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
S G G G+ + P G A+ ++I +G ++GKG
Sbjct: 246 LPAAAAASAAAASGLLGPAGLAGVGAFPAALPAFSGTDLAKELVEIAVPENLVGAILGKG 305
Query: 417 GFNVKQLQQETGASIHV 433
G + + Q+ TGA I +
Sbjct: 306 GKTLVEYQELTGARIQI 322
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERVIRASAFEGL 453
E+ +K+L + G +IGKGG + QLQ+ETGA+I + +D + ERV
Sbjct: 40 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 99
Query: 454 WN-------------PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGH 500
N P++ T ++ + + + +L+VP+S G I+G+GG
Sbjct: 100 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGA 159
Query: 501 VINEMRRRTQADIRVVGARVKLQDPHPGSS--ECIVDIRGSSEHLISAHGTYQSFMTSGQ 558
+ + ++ GA V+L G + E +V + G E + A S
Sbjct: 160 TVKAVMEQS-------GAWVQLSQKPEGINLQERVVTVSGEPEQVHKA--------VSAI 204
Query: 559 SMKVQPSSYQNINPQQSSCQTMSSHQSS--YQNMNTQQSPY 597
KVQ +PQ SSC +S + N N SPY
Sbjct: 205 VQKVQE------DPQSSSCLNISYANVAGPVANSNPTGSPY 239
Score = 40.8 bits (94), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
+ASD D E ++L+P+ G ++GK G I +L+ ETGA I++
Sbjct: 30 IASDRDGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL 76
Score = 38.9 bits (89), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 49/217 (22%), Positives = 82/217 (37%), Gaps = 42/217 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG--SEERVIIIYSSPTKIAKTQ 188
+++ P+ G +IGK G VK++ E++ A + ++ G +ERV+ + P ++ K
Sbjct: 142 KLIVPNSTAGLIIGKGGATVKAVMEQSGAWVQLSQKPEGINLQERVVTVSGEPEQVHKAV 201
Query: 189 NKDDDSAAETKKESM--------------------EPHCAAQDAL--LKVHDRIIEEDLF 226
+ E + S P+ + D L L
Sbjct: 202 SAIVQKVQEDPQSSSCLNISYANVAGPVANSNPTGSPYASPADVLPAAAAASAAAASGLL 261
Query: 227 G--GMA------------SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
G G+A S D + + VP N+VG +LGK G + + TGA
Sbjct: 262 GPAGLAGVGAFPAALPAFSGTDLAKELV--EIAVPENLVGAILGKGGKTLVEYQELTGAR 319
Query: 273 IRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
I++ P N V I+G P + A Y +S
Sbjct: 320 IQISKKGEFLPGTRN--RRVTITGSPAATQAAQYLIS 354
>gi|410904074|ref|XP_003965518.1| PREDICTED: far upstream element-binding protein 3-like [Takifugu
rubripes]
Length = 569
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 90/432 (20%), Positives = 161/432 (37%), Gaps = 121/432 (28%)
Query: 135 PSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDS 194
P + +G +IGK G + ++ E+ KI +A G +R + SP I +
Sbjct: 86 PDKMVGFIIGKGGEQISRIQLESGCKIQIASDSGGMLDRPCTLTGSPENIELAK------ 139
Query: 195 AAETKKESMEPHCAAQDALLKVHDRIIEEDLFG-GMASDDDNENSTITARLLVPNNMVGC 253
++ + I+E+ +G G D D S ++L+P N VG
Sbjct: 140 --------------------RLLNEIVEQCRYGPGFHCDMDGNGSI--QQILIPANKVGL 177
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK+G+ I++L+ TG + ++ D LP A D+ ++I+G P ++A V L+
Sbjct: 178 VIGKKGETIKQLQERTGVQMIMIQDDPLPTGA---DKPLRITGDPQKVQQARELVVKLI- 233
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+DK F G D
Sbjct: 234 ----RDKDQGDF------------------------------------------RVGRAD 247
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
S+MG +++ P F++ I +IG+ G ++++Q + G I
Sbjct: 248 FGSKMGGSTLDVVVP--------RFAVGI---------IIGRNGEMIRKIQNDAGVRIQF 290
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEK---------------G 478
+ S ERV + + I+ ++Q + F G
Sbjct: 291 KQDDGISPERVAQVMGQLDHCHHAVHIINELVQTAQERDGFGGVMGRRGRGDCNMGGSGG 350
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQD---PHPGSSECIVD 535
VP+ K G ++G+GG I ++ +++ A V+LQ P+ S I
Sbjct: 351 LQEVTYAVPADKCGLVIGKGGETIKNIKEQSR-------AHVELQRNPPPNTDPSVRIFS 403
Query: 536 IRGSSEHLISAH 547
IRG+ + L A
Sbjct: 404 IRGTPQQLEKAR 415
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 92/194 (47%), Gaps = 30/194 (15%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA--DTIPGSEERVIIIYSSPTKIA 185
++ +IL P+ K+G VIGK G +K L+E T ++ + D +P ++ + I P K+
Sbjct: 164 SIQQILIPANKVGLVIGKKGETIKQLQERTGVQMIMIQDDPLPTGADKPLRITGDPQKVQ 223
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
+ A++ ++K+ + D G A D ++ T ++
Sbjct: 224 Q----------------------ARELVVKLIRDKDQGDFRVGRA-DFGSKMGGSTLDVV 260
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP VG ++G+ G++I++++++ G I+ D + P + + Q+ G+ + A+
Sbjct: 261 VPRFAVGIIIGRNGEMIRKIQNDAGVRIQFKQDDGISP-----ERVAQVMGQLDHCHHAV 315
Query: 306 YEVSTLLHQNPRKD 319
+ ++ L+ +D
Sbjct: 316 HIINELVQTAQERD 329
Score = 45.4 bits (106), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 93/220 (42%), Gaps = 36/220 (16%)
Query: 339 APMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF 398
A M D P NSS P + SL+G +G Q + +G N G M A
Sbjct: 32 AKMGD-QPNMNSSPPVIDPSLYG---------FGGQKRSLDNGVGNHL--GSMVHQRALA 79
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRS 458
+ +G +IGKGG + ++Q E+G I + +DS + R G
Sbjct: 80 TEDFKVPDKMVGFIIGKGGEQISRIQLESGCKIQIA---SDSGGMLDRPCTLTG----SP 132
Query: 459 QTIDAILQLQNKTSE-----------FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ I+ +L N+ E G+I ++L+P++KVG ++G+ G I +++
Sbjct: 133 ENIELAKRLLNEIVEQCRYGPGFHCDMDGNGSI-QQILIPANKVGLVIGKKGETIKQLQE 191
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAH 547
RT + ++ DP P ++ + I G + + A
Sbjct: 192 RTGVQMIMI-----QDDPLPTGADKPLRITGDPQKVQQAR 226
>gi|296189557|ref|XP_002742821.1| PREDICTED: poly(rC)-binding protein 1 isoform 1 [Callithrix
jacchus]
Length = 375
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 92/347 (26%), Positives = 144/347 (41%), Gaps = 73/347 (21%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +R+E+ A+I + + G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIRKESGARIKILE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIYKLEEDINSSM-TKSTAASRLVTLRLVVP 104
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN-----VAK 302
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P V +
Sbjct: 105 ATQCGSLIGKGGCKIKEIRKSTGAQVQV-AGDMLPN---STERAITIAGVPQSVTKCVKQ 160
Query: 303 RALYEVSTLLHQNPRKDKP------PSSFP-QAYGGQNFHSPPA--PMADMHPLGNSSWP 353
L + TL H K K PS P GGQ+ S A P A H L P
Sbjct: 161 ICLVMLETLSHSPQGKVKTILYQPMPSRSPVTCAGGQDRCSDAAGYPHAT-HDL--EGPP 217
Query: 354 ARNSSLHGMPS-TPWMGGYGDQPSR-----------MGSGSINSCPPGQMG-----EVSA 396
S+ G + +P +Q +R G I+S P G + S
Sbjct: 218 LDAYSIQGQHTISPLNLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDAST 277
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ + ++ IG +IG+ G N+ +++Q +GA I + + S R
Sbjct: 278 QITHELTIPNNLIGCIIGRQGTNINEIRQMSGAQIKIANPVEGSSGR 324
Score = 62.0 bits (149), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 81/154 (52%), Gaps = 23/154 (14%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGL 453
++ ++++L ++G +IGK G +VK++++E+GA I + + + ER+I L
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEG--NCPERIIT------L 61
Query: 454 WNPRSQTIDA----ILQLQNKTSEFSEKGT-----ITTRLLVPSSKVGCILGQGGHVINE 504
P + A I +L+ + K T +T RL+VP+++ G ++G+GG I E
Sbjct: 62 TGPTNAIFKAFAMIIYKLEEDINSSMTKSTAASRLVTLRLVVPATQCGSLIGKGGCKIKE 121
Query: 505 MRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
+R+ T A ++V G D P S+E + I G
Sbjct: 122 IRKSTGAQVQVAG------DMLPNSTERAITIAG 149
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K NSS +S S+ R++ P+ + G +IGK G +K +R
Sbjct: 66 NAIFKAFAMIIYKLEEDINSSMTKSTAASRLV--TLRLVVPATQCGSLIGKGGCKIKEIR 123
Query: 155 EETQAKITVA-DTIPGSEERVIIIYSSPTKIAK 186
+ T A++ VA D +P S ER I I P + K
Sbjct: 124 KSTGAQVQVAGDMLPNSTERAITIAGVPQSVTK 156
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPAD 279
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I++L +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIRKESGARIKILEGN 53
Score = 43.5 bits (101), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 7/81 (8%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
IT L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS
Sbjct: 279 ITHELTIPNNLIGCIIGRQGTNINEIRQMS-------GAQIKIANPVEGSSGRQVTITGS 331
Query: 540 SEHLISAHGTYQSFMTSGQSM 560
+ + A ++ ++S + M
Sbjct: 332 AASISLAQYLIKARLSSEKGM 352
>gi|444021|emb|CAA82631.1| sub2.3 [Homo sapiens]
Length = 299
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 47/236 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 161
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
+ ++ + + Q+ G+ P PM P+ + R S G P
Sbjct: 162 ICLVMLE---------TLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYP 208
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 83/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKT---SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTERAITIAG 150
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
>gi|313228809|emb|CBY17960.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 98/230 (42%), Gaps = 41/230 (17%)
Query: 108 KGNWSNSSREQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT 166
+G++ S +G + V +R L PS+ G VIGK G +KSLR + ++ V D
Sbjct: 113 QGDFKRSRPSGGYGQKRDEPGVGHRFLIPSKMAGAVIGKGGTTIKSLRSDFACQLNVPDA 172
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
ERV+ + ++ L++ ++ D+
Sbjct: 173 Q--GPERVLRFVCEDSNVS--------------------------PLIEKVGNLLRNDM- 203
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+ + +S I R+LV + G ++G +G+ I+ LR +TG I V P
Sbjct: 204 --VERNRAQADSDIDMRMLVHQSKAGAVIGFKGETIKGLRDKTGCKINVY----QDPAPH 257
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHS 336
++D +++++G+P+ E+ +L+ D PP F Q + +N S
Sbjct: 258 SSDRLIKVAGQPDKIATCFGEILLILN-----DIPPKGFVQEFDPENADS 302
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 111/270 (41%), Gaps = 33/270 (12%)
Query: 338 PAPMADMHPLGNS---SWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSIN------SCPP 388
P PM P+G P RN G P + G G + G G + S P
Sbjct: 63 PLPMGGPLPMGGPLAMGGPPRNMGHRGPGHFPPVNGGGHDGRKRGHGQDSQGDFKRSRPS 122
Query: 389 GQMGEVSAE--FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR 446
G G+ E + L + G VIGKGG +K L+ + ++V DA ERV+R
Sbjct: 123 GGYGQKRDEPGVGHRFLIPSKMAGAVIGKGGTTIKSLRSDFACQLNVPDA--QGPERVLR 180
Query: 447 ASAFEGLWNPRSQTIDAILQ----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVI 502
+ +P + + +L+ +N+ S+ I R+LV SK G ++G G I
Sbjct: 181 FVCEDSNVSPLIEKVGNLLRNDMVERNRAQADSD---IDMRMLVHQSKAGAVIGFKGETI 237
Query: 503 NEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKV 562
+R +T I V QDP P SS+ ++ + G + + + G + +
Sbjct: 238 KGLRDKTGCKINV------YQDPAPHSSDRLIKVAGQPDKIATCFGEILLILND-----I 286
Query: 563 QPSSY-QNINPQQSSCQTMSSHQSSYQNMN 591
P + Q +P+ + T +Y++ N
Sbjct: 287 PPKGFVQEFDPENADS-TFDYGGFAYEDAN 315
>gi|384947380|gb|AFI37295.1| poly(rC)-binding protein 1 [Macaca mulatta]
Length = 358
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 88/348 (25%), Positives = 144/348 (41%), Gaps = 73/348 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 161
Query: 308 VSTLLHQN------------PRKDKPPSSFPQAYGGQNFHSPPA--PMADMHPLGNSSWP 353
+ ++ + P + P SS GGQ+ S A P A H L P
Sbjct: 162 ICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT-HDL--EGPP 218
Query: 354 ARNSSLHGMPS-TPWMGGYGDQPSR-----------MGSGSINSCPPGQMG-----EVSA 396
S+ G + +P +Q +R G I+S P G + SA
Sbjct: 219 LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWAGLDASA 278
Query: 397 E-FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ S ++ IG +IG+ G + +++Q +GA I + + S +R
Sbjct: 279 QTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKIANPVEGSTDR 326
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTERAITIAG 150
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%), Gaps = 5/79 (6%)
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
D T + L +PN+++GC++G++G I +R +GA I++ P +TD V
Sbjct: 275 DASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQIKI-----ANPVEGSTDRQVT 329
Query: 294 ISGKPNVAKRALYEVSTLL 312
I+G A Y ++ L
Sbjct: 330 ITGSAASISLAQYLINVRL 348
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
Score = 40.8 bits (94), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 280 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 332
Query: 539 SSEHL 543
S+ +
Sbjct: 333 SAASI 337
>gi|356535513|ref|XP_003536289.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 136/328 (41%), Gaps = 77/328 (23%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIY 178
+S+ T R L + G VIGK G+ + + ++ A+I ++ + PG+ +R+I++
Sbjct: 30 DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVS 89
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+ +I Q A+ + +++ E + S+DDN+
Sbjct: 90 GAINEI-------------------------QRAVELILSKLLSE-----LHSEDDNDAE 119
Query: 239 TIT-ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
T RL+VPN G ++GK G I+ ++ A I++ P D D +V ++G
Sbjct: 120 PKTKVRLVVPNGSCGGIIGKGGATIRSFIEDSQAGIKISPQDN--NYYGQNDRLVTLTGS 177
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
+ RA+ + + L ++P + +S P +Y G F S
Sbjct: 178 FDEQMRAIELIVSKLSEDPHYAQSMNS-PFSYPGVYF----------------------S 214
Query: 358 SLHGMPSTPWMGGYGDQPSRM--GSGSINSCPPGQMG--------EVSAEFSMKILCSAG 407
G+P T + PS ++N P G G E S +M +
Sbjct: 215 GYQGVPYTYVL------PSVAPPAYNAVNYRPNGAAGGKLQNSKEERSNSLTMGVADE-- 266
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVED 435
IG V+G+GG N+ ++ Q +GA I + D
Sbjct: 267 HIGLVVGRGGRNIMEISQASGARIKISD 294
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 14/125 (11%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV----EDAPTDSDERVIRASAFEGLWN 455
++ L S G VIGKGG + Q ++GA I + E P +D R+I S G N
Sbjct: 38 IRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTD-RIIMVS---GAIN 93
Query: 456 PRSQTIDAIL-----QLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
+ ++ IL +L ++ +E T RL+VP+ G I+G+GG I +Q
Sbjct: 94 EIQRAVELILSKLLSELHSEDDNDAEPKT-KVRLVVPNGSCGGIIGKGGATIRSFIEDSQ 152
Query: 511 ADIRV 515
A I++
Sbjct: 153 AGIKI 157
>gi|356566965|ref|XP_003551695.1| PREDICTED: uncharacterized protein LOC100805008 [Glycine max]
Length = 157
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 53/92 (57%), Gaps = 12/92 (13%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D ++RI+ PSR IG VIGK G+ ++ +RE+T+A I +AD I EERVIII S
Sbjct: 75 DVIFRIVVPSRHIGKVIGKEGHRIQKIREDTKATIKIADAIARHEERVIIISS------- 127
Query: 187 TQNKDDDSAAETKKESME--PHCAAQDALLKV 216
KD+D ++++E H +D L +
Sbjct: 128 ---KDNDEKVTDAEKALEQIAHLILKDMWLPI 156
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 46/78 (58%), Gaps = 10/78 (12%)
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN--- 299
R++VP+ +G ++GK G IQ++R +T A I++ A A + + ++ IS K N
Sbjct: 79 RIVVPSRHIGKVIGKEGHRIQKIREDTKATIKIADA-----IARHEERVIIISSKDNDEK 133
Query: 300 --VAKRALYEVSTLLHQN 315
A++AL +++ L+ ++
Sbjct: 134 VTDAEKALEQIAHLILKD 151
>gi|392894107|ref|NP_497351.3| Protein PES-4 [Caenorhabditis elegans]
gi|373220643|emb|CCD73932.1| Protein PES-4 [Caenorhabditis elegans]
Length = 432
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 38/208 (18%)
Query: 112 SNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS- 170
S S RE S + T+ R+L +++G +IGK G+ +K +REE+ AKI ++D GS
Sbjct: 57 SCSPRETSPSTTSLVLTI-RLLMQGKEVGSIIGKKGDQIKKIREESGAKINISD---GSC 112
Query: 171 EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMA 230
ER++ I + I K N V ++ EED+ +
Sbjct: 113 PERIVTITGTLGVIGKAFNM-------------------------VCNKF-EEDM---LL 143
Query: 231 SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE 290
+ IT R++VP G L+GK G I+ +R TGA+I+V ++ LP +T+
Sbjct: 144 LPNSVPKPPITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQV-ASEMLP---HSTER 199
Query: 291 MVQISGKPNVAKRALYEVSTLLHQNPRK 318
V +SG + + +V +L + P K
Sbjct: 200 AVTLSGTADAINLCMTQVCQILLEAPPK 227
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 19/167 (11%)
Query: 384 NSCPPGQMG--EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD 441
+SC P + S ++++L ++G +IGK G +K++++E+GA I++ D
Sbjct: 56 SSCSPRETSPSTTSLVLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCP 113
Query: 442 ERVIRASAFEGLWNPRSQTI-----DAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILG 496
ER++ + G+ + + +L L N K IT R++VP+++ G ++G
Sbjct: 114 ERIVTITGTLGVIGKAFNMVCNKFEEDMLLLPNSV----PKPPITMRVIVPATQCGSLIG 169
Query: 497 QGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+GG I ++R T A I+V + PH S+E V + G+++ +
Sbjct: 170 KGGSKIKDIREATGASIQVASEML----PH--STERAVTLSGTADAI 210
>gi|355709446|gb|AES03594.1| Poly rC-binding protein 1 [Mustela putorius furo]
Length = 209
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/237 (25%), Positives = 99/237 (41%), Gaps = 47/237 (19%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 16 IRLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT------- 65
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLV 246
+A+ K II EED+ M + +T RL+V
Sbjct: 66 ---------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVV 104
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALY 306
P G L+GK G I+ +R TGA ++V D LP +T+ + I+G P +
Sbjct: 105 PATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVK 160
Query: 307 EVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
++ ++ + + Q+ G+ P PM P+ + R S G P
Sbjct: 161 QICLVMLE---------TLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYP 208
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 83/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKT---SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTERAITIAG 150
Score = 40.8 bits (94), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
>gi|346473549|gb|AEO36619.1| hypothetical protein [Amblyomma maculatum]
Length = 320
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 102/230 (44%), Gaps = 46/230 (20%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
N + + R ++ G + D R L SR G +IGK G + SLR+E +A I+V D PG
Sbjct: 23 NEAPNKRPRNSGGGRAVDV--RFLLQSRNAGAIIGKGGTNINSLRKEFKASISVPDC-PG 79
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
E R++ I + + D LL + I + D F
Sbjct: 80 PE-RILSIVADLDTLG-------------------------DILLNI---IPKLDDFAQH 110
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
+ S + RLL+ + GC++G+ G I+ LR TGANI+V + C +T+
Sbjct: 111 TGQNGGSESEM--RLLMHQSHAGCIIGRAGCRIKELRESTGANIKVHGS----CCPGSTE 164
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRK--DKP------PSSFPQAYGG 331
+V+++G P V + ++ ++ P K +KP F Q YGG
Sbjct: 165 RIVKVTGSPAVVVDCIKQICDIIGVAPIKGLNKPYDPHNFDPEFSQEYGG 214
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 72/142 (50%), Gaps = 12/142 (8%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
++ L + G +IGKGG N+ L++E ASI V D P ER++ S L
Sbjct: 41 VRFLLQSRNAGAIIGKGGTNINSLRKEFKASISVPDCP--GPERIL--SIVADLDTLGDI 96
Query: 460 TIDAILQLQNKTSEFSEKGTITT--RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
++ I +L + + G + RLL+ S GCI+G+ G I E+R T A+I+V G
Sbjct: 97 LLNIIPKLDDFAQHTGQNGGSESEMRLLMHQSHAGCIIGRAGCRIKELRESTGANIKVHG 156
Query: 518 ARVKLQDPHPGSSECIVDIRGS 539
+ PGS+E IV + GS
Sbjct: 157 SCC------PGSTERIVKVTGS 172
>gi|116192195|ref|XP_001221910.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
gi|88181728|gb|EAQ89196.1| conserved hypothetical protein [Chaetomium globosum CBS 148.51]
Length = 375
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 74/322 (22%), Positives = 133/322 (41%), Gaps = 53/322 (16%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R + S++ G +IGK G V LR+ET K V+ + G +RV+ I I++
Sbjct: 52 LRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVYDRVLTITGGCEAISRA-- 109
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
+ ALL+ I GG+ N T +LL+ +N
Sbjct: 110 ----------------YAVVARALLEGAPTI----GMGGVV----QSNGTHPIKLLISHN 145
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV- 308
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P +RA++E+
Sbjct: 146 QMGTIIGRQGLKIKHIQDVSG--VRMVAQKEMLP--QSTERIVEVQGTPEGIQRAIWEIC 201
Query: 309 -----------STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
T+L+ + + + P G NF + D P G S
Sbjct: 202 KCLVDDWQRGAGTVLYNPVVRTQGAGAAPGVTGTTNF------VQDRAPYGGS-----RV 250
Query: 358 SLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG 417
+ G + GG R S + PP + I A +G +IG+GG
Sbjct: 251 TRTGNGADFSNGGPRPYNRRSDSDAAARGPPTHDENGEEIQTQNISIPADMVGCIIGRGG 310
Query: 418 FNVKQLQQETGASIHVEDAPTD 439
+ ++++ +GA I + AP D
Sbjct: 311 SKISEIRKTSGARISIAKAPHD 332
Score = 45.1 bits (105), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
D+N T + +P +MVGC++G+ G I +R +GA I + A P + M
Sbjct: 284 DENGEEIQTQNISIPADMVGCIIGRGGSKISEIRKTSGARISIAKA----PHDETGERMF 339
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKDK 320
I G +RAL+ LL++N +K
Sbjct: 340 TIMGSAKANERALF----LLYENLEAEK 363
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 38/151 (25%), Positives = 73/151 (48%), Gaps = 10/151 (6%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLWN 455
+ +++ + S+ + G +IGKGG NV L+ ETG V +RV+ + E +
Sbjct: 49 QLTLRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVYDRVLTITGGCEAISR 108
Query: 456 PRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ A+L+ GT +LL+ +++G I+G+ G I + + +
Sbjct: 109 AYAVVARALLEGAPTIGMGGVVQSNGTHPIKLLISHNQMGTIIGRQGLKIKHI--QDVSG 166
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+R+V + L P S+E IV+++G+ E +
Sbjct: 167 VRMVAQKEML----PQSTERIVEVQGTPEGI 193
>gi|33150676|gb|AAP97216.1|AF092441_1 CBP [Homo sapiens]
Length = 397
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 89/190 (46%), Gaps = 34/190 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSFLERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+G+ G I+ +R TGA ++V D P +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGQAGTKIKEIRETTGAQVQV-AGDLFP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRK 318
++ ++P K
Sbjct: 167 CAVILESPPK 176
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IG+AG +K +RE T A++ VA D P S ER + +
Sbjct: 95 GNVSRPPVTLRLVIPASQCGSLIGQAGTKIKEIRETTGAQVQVAGDLFPNSTERAVTVSG 154
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGGMASDD-- 233
P I + E+ + P + LL + + +G + +
Sbjct: 155 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTQREVT 214
Query: 234 ---------------------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 215 KLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 274
Query: 273 IRV 275
I++
Sbjct: 275 IKI 277
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SFLERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++GQ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGQAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLFPNSTERAVTVSGVPDAII 160
>gi|431921619|gb|ELK18971.1| Poly(rC)-binding protein 2 [Pteropus alecto]
Length = 446
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 113/281 (40%), Gaps = 68/281 (24%)
Query: 95 NNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLR 154
N FK ++ K +SS S S+P T+ R++ P+ + G +IGK G +K +R
Sbjct: 58 NAIFKAFAMIIDKLEEDISSSMTNSTAASKPPVTL-RLVVPASQCGSLIGKGGCKIKEIR 116
Query: 155 EETQAKITVA-DTIPGSEERVIIIY----------------------------------S 179
E T A++ VA D +P S ER I I S
Sbjct: 117 ESTGAQVQVAGDMLPNSTERAITIAGIPQSIIECVKQICVVMLESPPKGVTIPYRPKPSS 176
Query: 180 SPTKIAKTQNK---DDDSAA---ETKKESMEP---------------HCAAQDALLKVHD 218
SP A Q++ DSA+ T + P + Q L K+H
Sbjct: 177 SPVIFAGGQDRYSTGSDSASFPHTTPSMCLNPDLEGPPLEAYTIQGQYAIPQPDLTKLHQ 236
Query: 219 RIIEEDLF------GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
+++ F G ++ D T + L +PN+++GC++G++G I +R +GA
Sbjct: 237 LAMQQSHFPMTHGNTGFSAGLDASAQTTSHELTIPNDLIGCIIGRQGAKINEIRQMSGAQ 296
Query: 273 IRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
I++ P +TD V I+G A Y ++ L
Sbjct: 297 IKI-----ANPVEGSTDRQVTITGSAASISLAQYLINVSLE 332
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 92/203 (45%), Gaps = 45/203 (22%)
Query: 144 GKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESM 203
GK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 22 GKKGESVKKMREESGARINISE---GNCPERIITLAGPT--------------------- 57
Query: 204 EPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGD 260
+A+ K II EED+ M + +T RL+VP + G L+GK G
Sbjct: 58 -------NAIFKAFAMIIDKLEEDISSSMTNSTAASKPPVTLRLVVPASQCGSLIGKGGC 110
Query: 261 VIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKD- 319
I+ +R TGA ++V D LP +T+ + I+G P + ++ ++ ++P K
Sbjct: 111 KIKEIRESTGAQVQVA-GDMLP---NSTERAITIAGIPQSIIECVKQICVVMLESPPKGV 166
Query: 320 ----KP-PSSFPQAY-GGQNFHS 336
+P PSS P + GGQ+ +S
Sbjct: 167 TIPYRPKPSSSPVIFAGGQDRYS 189
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 75/137 (54%), Gaps = 16/137 (11%)
Query: 414 GKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAFEGLWNPRSQTIDAILQ-----L 467
GK G +VK++++E+GA I++ + + ER+I A ++ + ID + + +
Sbjct: 22 GKKGESVKKMREESGARINISEG--NCPERIITLAGPTNAIFKAFAMIIDKLEEDISSSM 79
Query: 468 QNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP 527
N T+ + K +T RL+VP+S+ G ++G+GG I E+R T A ++V G D P
Sbjct: 80 TNSTA--ASKPPVTLRLVVPASQCGSLIGKGGCKIKEIRESTGAQVQVAG------DMLP 131
Query: 528 GSSECIVDIRGSSEHLI 544
S+E + I G + +I
Sbjct: 132 NSTERAITIAGIPQSII 148
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 263 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 315
Query: 539 SSEHL 543
S+ +
Sbjct: 316 SAASI 320
>gi|417409319|gb|JAA51170.1| Putative polyc-binding alphacp-1, partial [Desmodus rotundus]
Length = 283
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 83/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 19 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 76
Query: 453 LWNPRSQTIDAILQLQNKT---SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 77 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 136
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 137 GAQVQVAG------DMLPNSTERAITIAG 159
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 47/236 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 26 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 74
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 75 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 114
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 115 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGVPQSVTECVKQ 170
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
+ ++ + + Q+ G+ P PM P+ + R S G P
Sbjct: 171 ICLVMLE---------TLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYP 217
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 20 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 58
>gi|403260495|ref|XP_003922705.1| PREDICTED: poly(rC)-binding protein 1 [Saimiri boliviensis
boliviensis]
Length = 302
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 83/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKT---SEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTERAITIAG 150
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 99/236 (41%), Gaps = 47/236 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 161
Query: 308 VSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
+ ++ + + Q+ G+ P PM P+ + R S G P
Sbjct: 162 ICLVMLE---------TLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYP 208
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
>gi|346716112|ref|NP_001231214.1| far upstream element (FUSE) binding protein 3 [Sus scrofa]
gi|336390571|gb|AEI54345.1| far upstream element binding protein 3 [Sus scrofa]
Length = 548
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/328 (21%), Positives = 132/328 (40%), Gaps = 82/328 (25%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKIA 185
T+ +L P+ K+G VIGK G +K L+E T K+ + +P ++ + I P K+
Sbjct: 163 TIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 222
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
A++ +L++ + D F G+ D + + +
Sbjct: 223 ----------------------VAREMVLEIIREKDQAD-FRGVRGDFSSRMGGGSIEVS 259
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P+ + A
Sbjct: 260 VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMGPPDRCQHAA 314
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST 365
+ +S L+ +D +GG +A G W
Sbjct: 315 HVISELILTAQERD--------GFGG-------LAVARGRGRGRGDW------------- 346
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
S+ + PG + E++ A K G VIGKGG N+K + Q
Sbjct: 347 ----------------SVGT--PGGIQEIT------YTVPADKCGLVIGKGGENIKSINQ 382
Query: 426 ETGASIHVEDAPTDSDERVIRASAFEGL 453
++GA + ++ P + + +R G+
Sbjct: 383 QSGAHVELQRNPPPNTDPGLRVFTIRGV 410
Score = 60.1 bits (144), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 106/479 (22%), Positives = 177/479 (36%), Gaps = 140/479 (29%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTP------------ 131
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR G +D + S+ LL+P + VG
Sbjct: 132 -------ESIE---QAKRLLGQIVDR-----CRNGPGFHNDVDGSSTIQELLIPASKVGL 176
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G P + A V ++
Sbjct: 177 VIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQVAREMVLEIIR 233
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G GD
Sbjct: 234 EKDQAD-----------------------------------------------FRGVRGD 246
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SRMG GSI P F++ I VIG+ G +K++Q + G I
Sbjct: 247 FSSRMGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 289
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF------------------- 474
+ S ER + + I ++ + F
Sbjct: 290 KPDDGISPERAAQVMGPPDRCQHAAHVISELILTAQERDGFGGLAVARGRGRGRGDWSVG 349
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ-DPHPGSSEC- 532
+ G VP+ K G ++G+GG I + +++ GA V+LQ +P P +
Sbjct: 350 TPGGIQEITYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPNTDPGL 402
Query: 533 -IVDIRG------SSEHLI------SAHGTYQSFMTSGQSMKVQP--SSYQNINPQQSS 576
+ IRG + HLI S G +F GQS QP + +QN P +SS
Sbjct: 403 RVFTIRGVPQQIEVARHLIDEKVGGSGLGAPGAF---GQSPFSQPPAAPHQNTFPPRSS 458
Score = 45.8 bits (107), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q + G N G + A + + +G +IG+GG + ++Q
Sbjct: 48 PSVYGYGVQKRPLDDGVGNQL--GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQA 105
Query: 426 ETGASIHVEDAPTDSDER--VIRAS--AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
E+G I + + ER V+ + + E Q +D ++ TI
Sbjct: 106 ESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDVDGSSTI- 164
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRT 509
LL+P+SKVG ++G+GG I +++ RT
Sbjct: 165 QELLIPASKVGLVIGKGGETIKQLQERT 192
>gi|363808250|ref|NP_001242748.1| uncharacterized protein LOC100819415 [Glycine max]
gi|255637181|gb|ACU18921.1| unknown [Glycine max]
Length = 318
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 59/112 (52%), Gaps = 5/112 (4%)
Query: 204 EPHCA---AQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGD 260
EP C+ A D LL+VH +++ D A + RLLV + G L+GK+G
Sbjct: 7 EPDCSIPPAVDVLLRVHKQVVNVDPHP--ADSASGAGRPVVTRLLVADTQAGSLIGKQGS 64
Query: 261 VIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
I+ + TG NIR+L ++ LP A+ D +V+I G+ + +A+ V+ L
Sbjct: 65 TIKSFQDATGCNIRILGSEHLPVFALRDDSVVEIQGESSGVHKAVELVAIHL 116
>gi|386771590|ref|NP_001246875.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
gi|383292065|gb|AFH04546.1| mushroom-body expressed, isoform K [Drosophila melanogaster]
Length = 573
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/377 (23%), Positives = 156/377 (41%), Gaps = 85/377 (22%)
Query: 106 IKKGNWSNSSREQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA 164
++ N S+S+ S + P+ T+ R++ +++G +IGK G IV REE+ AKI ++
Sbjct: 1 MEDNNTSSSAGGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINIS 60
Query: 165 DTIPGS-EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE 223
D GS ER++ + + I SA + E C+ + + KV
Sbjct: 61 D---GSCPERIVTVSGTTNAIF--------SAFTLITKKFEEWCSQFNDVGKVGK----- 104
Query: 224 DLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP 283
+ I RL+VP + G L+GK G I+ +R TG +I+V ++ LP
Sbjct: 105 --------------TQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV-ASEMLP- 148
Query: 284 CAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKD-------KPPSS------------ 324
+T+ V +SG + +Y++ ++ ++P + KP +
Sbjct: 149 --NSTERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANGQAFT 206
Query: 325 ---------------FPQAYGGQNFHSPPAPMADMHPLG---NSSWPARNSSLHGMPST- 365
FP A H+ + +AD G + PA + L MP
Sbjct: 207 IQGNYAVPTQETCPVFPLALATGGLHAGISGLADPLLKGAHLQGAIPAHHHHLQQMPDVA 266
Query: 366 --PWMGGYGDQPSRMG---SGSIN--SCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
P + M +G IN + P + + E ++ S IG +IGKGG
Sbjct: 267 KNPLASLAALGLAGMNPASTGGINHTANPANRAQQQQHEMTV----SNDLIGCIIGKGGT 322
Query: 419 NVKQLQQETGASIHVED 435
+ +++Q +GA I + +
Sbjct: 323 KIAEIRQISGAMIRISN 339
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G V + ++E+GA I++ D ER++ S G
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVS---GTT 75
Query: 455 NPRSQTIDAILQ-LQNKTSEFSEKGT-----ITTRLLVPSSKVGCILGQGGHVINEMRRR 508
N I + + S+F++ G I RL+VP+S+ G ++G+ G I E+R+
Sbjct: 76 NAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQT 135
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
T I+V + P S+E V + GS+E +
Sbjct: 136 TGCSIQVASEML------PNSTERAVTLSGSAEQI 164
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
+ V N+++GC++GK G I +R +GA IR+ + NTD + ISG P+
Sbjct: 305 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERE--GGNTDRTITISGNPDSVA 362
Query: 303 RALYEVS 309
A Y ++
Sbjct: 363 LAQYLIN 369
>gi|68475799|ref|XP_718106.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|68475932|ref|XP_718039.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439785|gb|EAK99099.1| hypothetical protein CaO19.13193 [Candida albicans SC5314]
gi|46439861|gb|EAK99174.1| hypothetical protein CaO19.5771 [Candida albicans SC5314]
gi|238882982|gb|EEQ46620.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 529
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 79/382 (20%), Positives = 149/382 (39%), Gaps = 85/382 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+ CP ++ ++G+ G + LRE+ +ITV++ + G ER++ + +A+
Sbjct: 163 RMYCPVKEASTIVGRKGETINHLREKANVRITVSENLKGVPERIVAVKGPAENVARA--- 219
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ R+I E+ AS + + +LL+P+ M
Sbjct: 220 -----------------------FGLITRVILEEPEDEPASINSQQ---YNLKLLIPHPM 253
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++GK+G + + + A ++ + LP +TD ++ + G + A+Y ++
Sbjct: 254 IGFIIGKQGLKFREIEENSAAKLKAA-ENALP---YSTDRVLSVMGVGDAIHIAVYYIAQ 309
Query: 311 LLHQ-------------NP------------RKDKPPS-SFPQAYGGQN----FHSPPAP 340
++ + NP R+ +PPS S+ G Q F PP
Sbjct: 310 VMLEHKEVLKKHKVVLYNPANYQPTDQSLGGRQRQPPSNSYNNPMGYQAKLPPFSKPPQH 369
Query: 341 MADMHPLGNSSWPARNSSLHGMPST-----------------PWMGGYGDQPSRMGSGSI 383
+ PA G P T P + D+ G +
Sbjct: 370 QQSPYNFSMMFQPAVQPQHFGSPVTSNPNAVSPVGMQPSVNIPPQNQFTDEFGNTIVGEV 429
Query: 384 NSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ PP Q G+ +++ + + IG VIGK G N+K + +ET A +V+ P
Sbjct: 430 ITTPPIQAGQ--DKYNQDVFVANSSIGSVIGKRGNNIKHI-RETSACTYVKIEPDKGQSM 486
Query: 444 VIRASAFEGLWNPRSQTIDAIL 465
++ +G+ N R T+ L
Sbjct: 487 ML--GGGKGMTNIRKLTLTGTL 506
>gi|367050644|ref|XP_003655701.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
gi|347002965|gb|AEO69365.1| hypothetical protein THITE_2119679 [Thielavia terrestris NRRL 8126]
Length = 374
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/328 (22%), Positives = 132/328 (40%), Gaps = 43/328 (13%)
Query: 117 EQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVII 176
+Q + +Q R + S++ G +IGK G V LREET K V+ + G +RV+
Sbjct: 42 DQEYAQTQ---LTLRAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSKVVQGVYDRVLT 98
Query: 177 IYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNE 236
I I++ A V ++E GM N
Sbjct: 99 ITGGCEAISR-------------------------AYAAVARSLLEGAPTMGMGGVIQN- 132
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T +LL+ +N +G ++G++G I+ ++ +G +R++ + P +T+ +V++ G
Sbjct: 133 NGTHPIKLLISHNQMGTIIGRQGLKIKHIQDVSG--VRMVAQKEMLP--QSTERIVEVQG 188
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKP-----PSSFPQAYGGQNFHSPPAPMADMHPLGNSS 351
P +RA++E+ L + ++ P Q G + D P G S
Sbjct: 189 TPEGIQRAVWEICKCLVDDWQRGTGTVLYNPVVRTQGVGAPGISGGSGYVQDRAPYGGS- 247
Query: 352 WPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGG 411
+ G + GG R S N PP + I A +G
Sbjct: 248 ----RVTRTGNGADFSNGGPRSYNRRSDSDPSNRGPPTHDENGEEIQTQNISIPADMVGC 303
Query: 412 VIGKGGFNVKQLQQETGASIHVEDAPTD 439
+IG+ G + ++++ +GA I + AP D
Sbjct: 304 IIGRAGSKISEIRKTSGARISIAKAPHD 331
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLWN 455
+ +++ + S+ + G +IGKGG NV L++ETG V +RV+ + E +
Sbjct: 49 QLTLRAIVSSKEAGVIIGKGGKNVADLREETGVKAGVSKVVQGVYDRVLTITGGCEAISR 108
Query: 456 PRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ ++L+ GT +LL+ +++G I+G+ G I + + +
Sbjct: 109 AYAAVARSLLEGAPTMGMGGVIQNNGTHPIKLLISHNQMGTIIGRQGLKIKHI--QDVSG 166
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+R+V + L P S+E IV+++G+ E +
Sbjct: 167 VRMVAQKEML----PQSTERIVEVQGTPEGI 193
Score = 42.4 bits (98), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
D+N T + +P +MVGC++G+ G I +R +GA I + A P + M
Sbjct: 283 DENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA----PHDETGERMF 338
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKDK 320
I G + AL+ LL++N +K
Sbjct: 339 TIMGTSKANETALF----LLYENLEAEK 362
>gi|15225229|ref|NP_180167.1| upstream element-binding protein [Arabidopsis thaliana]
gi|19310435|gb|AAL84954.1| F17H15.1/F17H15.1 [Arabidopsis thaliana]
gi|20197266|gb|AAM15002.1| unknown protein [Arabidopsis thaliana]
gi|20197368|gb|AAM15045.1| unknown protein [Arabidopsis thaliana]
gi|110741998|dbj|BAE98938.1| hypothetical protein [Arabidopsis thaliana]
gi|330252684|gb|AEC07778.1| upstream element-binding protein [Arabidopsis thaliana]
Length = 632
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 83/181 (45%), Gaps = 25/181 (13%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVI 175
S+G+ Q T +I P+ ++G +IGK G +K L+ ++ AKI V D P R +
Sbjct: 127 SYGSFQ--GTTKKIDIPNMRVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNCATRTV 184
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN 235
+ +P +I+K + D E + + + + D F
Sbjct: 185 DLTGTPDQISKAEQLITDVLQEAEAGNT---AGSGGGGGRRMGGQAGADQF--------- 232
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
+ +PNN VG ++GK G+ I+ ++++TGA I+V+P LPP + +QI
Sbjct: 233 -------VMKIPNNKVGLIIGKGGETIKSMQAKTGARIQVIPL-HLPPGDPTPERTLQID 284
Query: 296 G 296
G
Sbjct: 285 G 285
Score = 55.8 bits (133), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 69/150 (46%), Gaps = 17/150 (11%)
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
++G +IGKGG +K LQ ++GA I V DA + R + + + Q I +
Sbjct: 144 RVGVIIGKGGETIKYLQLQSGAKIQVTRDMDADPNCATRTVDLTGTPDQISKAEQLITDV 203
Query: 465 LQLQNKTSEFSEKGTITTR-----------LLVPSSKVGCILGQGGHVINEMRRRTQADI 513
LQ + G R + +P++KVG I+G+GG I M+ +T A I
Sbjct: 204 LQEAEAGNTAGSGGGGGRRMGGQAGADQFVMKIPNNKVGLIIGKGGETIKSMQAKTGARI 263
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+V+ + DP P E + I G +E +
Sbjct: 264 QVIPLHLPPGDPTP---ERTLQIDGITEQI 290
>gi|313239007|emb|CBY13992.1| unnamed protein product [Oikopleura dioica]
Length = 386
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 75/293 (25%), Positives = 120/293 (40%), Gaps = 57/293 (19%)
Query: 123 SQPADTVY-RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSP 181
SQP+D ++ R L PS+ G +IG+ G +++LREE QA I + + + ERV+ I +
Sbjct: 90 SQPSDKIWCRFLIPSKVAGAIIGRGGATIRALREEYQAIINIPEA--RAPERVLKICVNS 147
Query: 182 TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
+ T ++ I++ + G + E T
Sbjct: 148 RETLHT-------------------------IVSQIAEILKNENAKGSHNGRRKEGET-E 181
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV-QISGKPNV 300
R+LV ++ G ++G +G ++ LR TG+ I + P C N+ E V I G P
Sbjct: 182 LRILVQSSQAGAIIGTKGSTVKNLRETTGSRININPE-----CCPNSSERVAAIMGPPAT 236
Query: 301 AKRALYEVSTLLHQNPRKDKP----PSSFPQA--YGGQNFHSPPAPMADMHPLGNSSWP- 353
+ + + +L + P K P+ F YGG F DM P
Sbjct: 237 VVKCISMIYDILERVPAKGNEQRYDPNMFDPTYDYGGYGF--------DMRHSNEQFIPY 288
Query: 354 ARNSSLHGMPSTPWM---GGYGDQPSRMGSGSIN----SCPPGQMGEVSAEFS 399
+R +GMP+ +M G YG+ P +N + PP Q EFS
Sbjct: 289 SRPPYPYGMPNERFMHQPGPYGNSPPFYPQNFVNPGRFAGPPQQGAPSQQEFS 341
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 74/145 (51%), Gaps = 18/145 (12%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR--ASAFEGLWNPRS 458
+ L + G +IG+GG ++ L++E A I++ +A + ERV++ ++ E L S
Sbjct: 99 RFLIPSKVAGAIIGRGGATIRALREEYQAIINIPEA--RAPERVLKICVNSRETLHTIVS 156
Query: 459 QTIDAILQLQNKTSEFS---EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
Q I IL+ +N + ++G R+LV SS+ G I+G G + +R T
Sbjct: 157 Q-IAEILKNENAKGSHNGRRKEGETELRILVQSSQAGAIIGTKGSTVKNLRETT------ 209
Query: 516 VGARVKLQDPH--PGSSECIVDIRG 538
G+R+ + +P P SSE + I G
Sbjct: 210 -GSRINI-NPECCPNSSERVAAIMG 232
Score = 45.4 bits (106), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
G + +T RIL S + G +IG G+ VK+LRE T ++I + + P S ERV I
Sbjct: 173 GRRKEGETELRILVQSSQAGAIIGTKGSTVKNLRETTGSRININPECCPNSSERVAAIMG 232
Query: 180 SPTKIAK 186
P + K
Sbjct: 233 PPATVVK 239
>gi|147794644|emb|CAN66855.1| hypothetical protein VITISV_039970 [Vitis vinifera]
Length = 153
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%), Gaps = 3/88 (3%)
Query: 92 KRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVK 151
KRP + GV+ G ++ R ++ D ++RI+ PSR+IG VIGK G+ ++
Sbjct: 27 KRPRDD--DGGVIASATGEVADDHRSPKR-RAKNQDVLFRIVVPSRQIGKVIGKEGSRIQ 83
Query: 152 SLREETQAKITVADTIPGSEERVIIIYS 179
+REET+A I +AD I EERVIII S
Sbjct: 84 KIREETKATIKIADAIARHEERVIIISS 111
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 48/82 (58%), Gaps = 10/82 (12%)
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
+N + R++VP+ +G ++GK G IQ++R ET A I++ A A + + ++ IS
Sbjct: 56 KNQDVLFRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADA-----IARHEERVIIIS 110
Query: 296 GK--PNV---AKRALYEVSTLL 312
K NV A+ AL +V++L+
Sbjct: 111 SKDSENVISDAENALLQVASLI 132
Score = 41.2 bits (95), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
+I+ + +IG VIGK G ++++++ET A+I + DA +ERVI S+ + N S
Sbjct: 62 FRIVVPSRQIGKVIGKEGSRIQKIREETKATIKIADAIARHEERVIIISSKDS-ENVISD 120
Query: 460 TIDAILQL 467
+A+LQ+
Sbjct: 121 AENALLQV 128
>gi|357465707|ref|XP_003603138.1| Far upstream element-binding protein [Medicago truncatula]
gi|355492186|gb|AES73389.1| Far upstream element-binding protein [Medicago truncatula]
Length = 1145
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/197 (25%), Positives = 93/197 (47%), Gaps = 33/197 (16%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVI 175
S+G+S+ +I P+ ++G +IGK G +K L+ ++ AKI V D P S+ R++
Sbjct: 83 SYGSSK------KIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMV 136
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN 235
+ +P ++ + ++ AE E GG
Sbjct: 137 ELMGTPDAVSSAEKLINEVLAEA-----------------------EAGASGGGTRRMVA 173
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
++ + +PNN VG ++GK G+ I+ +++ TGA I+V+P PP +T+ ++I
Sbjct: 174 QSGGDEFVMQIPNNKVGLIIGKGGETIKSMQASTGARIQVIPL-HPPPGDTSTERTLKID 232
Query: 296 GKPNVAKRALYEVSTLL 312
G P+ + A V+ +L
Sbjct: 233 GTPDQIESAKQLVNQIL 249
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 102/241 (42%), Gaps = 34/241 (14%)
Query: 399 SMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE---DAPTDSDERVIRASAFEGLWN 455
S KI G++G +IGKGG +K LQ ++GA I V DA +S R++ +
Sbjct: 87 SKKIEIPNGRVGVLIGKGGETIKYLQMQSGAKIQVTRDMDADPNSQTRMVELMGTPDAVS 146
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITTRLL-----------VPSSKVGCILGQGGHVINE 504
+ I+ +L +E G T R++ +P++KVG I+G+GG I
Sbjct: 147 SAEKLINEVL----AEAEAGASGGGTRRMVAQSGGDEFVMQIPNNKVGLIIGKGGETIKS 202
Query: 505 MRRRTQADIRVVGARVKLQDPHPG--SSECIVDIRGSSEHLISAHGTYQSFMT------- 555
M+ T A I+V+ P PG S+E + I G+ + + SA +T
Sbjct: 203 MQASTGARIQVIPLH-----PPPGDTSTERTLKIDGTPDQIESAKQLVNQILTGENRLRN 257
Query: 556 SGQSMKVQPSSYQNINPQQSSCQTMSSHQS--SYQNMNTQQSPYHRVNAQQSPYQNINPQ 613
SG S YQ+ P + Q+ Y + P + N Q PY PQ
Sbjct: 258 SGNSGGYTQQGYQSRPPSSWAPPPAPVQQAGYGYGQPGSYSGPSPQYNMPQPPYAGYPPQ 317
Query: 614 Q 614
Q
Sbjct: 318 Q 318
>gi|395844390|ref|XP_003794945.1| PREDICTED: far upstream element-binding protein 3 [Otolemur
garnettii]
Length = 572
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 131/330 (39%), Gaps = 86/330 (26%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKIA 185
T+ IL P+ K+G VIGK G +K L+E T K+ + +P ++ + I P K+
Sbjct: 163 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGTDKPLRITGDPFKVQ 222
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL--FGGMASDDDNENSTITAR 243
+ A++ +L++ I E+D F + D + +
Sbjct: 223 Q----------------------AREMVLEI---IREKDQADFRSVRGDFGSRMGGGSIE 257
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P+ +
Sbjct: 258 VSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMGPPDRCQH 312
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
A + +S L+ +D F S P G+
Sbjct: 313 AAHIISELILTAQERD-------------GFGSLAVPRGRGRSRGD-------------- 345
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
W G PG + E++ A K G VIGKGG N+K +
Sbjct: 346 ---WSVGT----------------PGGVQEIT------YTVPADKCGLVIGKGGENIKSI 380
Query: 424 QQETGASIHVEDAPTDSDERVIRASAFEGL 453
Q++GA + ++ P + + +R G+
Sbjct: 381 NQQSGAHVELQRNPPPNTDPNLRIFTIRGI 410
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 108/479 (22%), Positives = 181/479 (37%), Gaps = 140/479 (29%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTP------------ 131
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR F +D + NSTI +L+P + VG
Sbjct: 132 -------ESIE---QAKRLLGQIVDRCRNGPSF----HNDVDGNSTIQ-EILIPASKVGL 176
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP TD+ ++I+G P ++A V ++
Sbjct: 177 VIGKGGETIKQLQERTGVKMVMIQDGPLP---TGTDKPLRITGDPFKVQQAREMVLEIIR 233
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D F S GD
Sbjct: 234 EKDQAD--------------FRSV---------------------------------RGD 246
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SRMG GSI P F++ I VIG+ G +K++Q + G I
Sbjct: 247 FGSRMGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 289
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF------------------- 474
+ S ER + + I ++ + F
Sbjct: 290 KPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQERDGFGSLAVPRGRGRSRGDWSVG 349
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSE--- 531
+ G VP+ K G ++G+GG I + +++ GA V+LQ P +++
Sbjct: 350 TPGGVQEITYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPNTDPNL 402
Query: 532 CIVDIRG------SSEHLI------SAHGTYQSFMTSGQSMKVQP--SSYQNINPQQSS 576
I IRG + HLI ++ G +F GQS QP + +QN P +SS
Sbjct: 403 RIFTIRGIPQQIEVARHLIDEKVGGTSLGAPGAF---GQSPFSQPPATPHQNTFPPRSS 458
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 71/155 (45%), Gaps = 7/155 (4%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q + G N G + A + + +G +IG+GG + ++Q
Sbjct: 48 PSVYGYGVQKRPLDDGVGNQL--GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQA 105
Query: 426 ETGASIHVEDAPTDSDER--VIRAS--AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
E+G I + + ER V+ + + E Q +D + ++ TI
Sbjct: 106 ESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPSFHNDVDGNSTI- 164
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+L+P+SKVG ++G+GG I +++ RT + ++
Sbjct: 165 QEILIPASKVGLVIGKGGETIKQLQERTGVKMVMI 199
>gi|238836390|gb|ACR61403.1| IGF-II mRNA-binding protein 2a variant D [Danio rerio]
Length = 388
Score = 64.7 bits (156), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 99/425 (23%), Positives = 169/425 (39%), Gaps = 95/425 (22%)
Query: 114 SSREQ---------SFGNSQPA-DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
+SREQ S G+ Q D R+L P++ +G +IGK G +K++ ++TQ+K+ +
Sbjct: 20 TSREQDSQPGTSGSSLGSRQKQPDFPLRMLVPTQFVGAIIGKEGLTIKNITKQTQSKVDI 79
Query: 164 -ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIE 222
G+ E+ I I+S+P + + D +KE++ D +
Sbjct: 80 HRKENAGAAEKPITIHSTPEGCSTACHMIMDI---MQKEAV--------------DTKVT 122
Query: 223 EDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
ED I ++L N++VG L+GK G ++++ +T I + L
Sbjct: 123 ED---------------IPLKILAHNSLVGRLIGKEGRNLKKIEEDTETKITISSLQDL- 166
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPP-------------------- 322
N + + + G RA E+ L + D
Sbjct: 167 -TIYNPERTIIVKGSIEACCRAEVEIMKKLREAYENDVAAINQQSNLIPGLSLSALGIFS 225
Query: 323 ---SSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMG 379
S P A G + PP P P G + + +S L G+ P G Q
Sbjct: 226 TGLSVLPPAAGPRGI--PPVP-----PTGYNPFLGHSSQLGGLYGVPPASGISHQ----- 273
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
++ P Q EV + + +G +IGK G ++KQL + GASI + AP +
Sbjct: 274 ----HTQAPEQ--EV-----VYLFIPTQAVGAIIGKKGQHIKQLARFAGASIKI--APAE 320
Query: 440 SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS--EKGTITTRLLVPSSKVGCILGQ 497
S + R G + + I + + F+ E+ + T + VPSS G ++G+
Sbjct: 321 SPDVTQRMVIITGPPEAQFKAQGRIFGKLKEENFFTAKEEVKLETHIKVPSSAAGRVIGK 380
Query: 498 GGHVI 502
GG +
Sbjct: 381 GGKTV 385
>gi|194225936|ref|XP_001499355.2| PREDICTED: far upstream element-binding protein 3 [Equus caballus]
Length = 573
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 69/328 (21%), Positives = 133/328 (40%), Gaps = 82/328 (25%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKIA 185
T+ +L P+ K+G VIGK G +K L+E T K+ + +P ++ + I P K+
Sbjct: 164 TIQELLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 223
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
+ A++ +L++ + D F G+ D + + +
Sbjct: 224 Q----------------------AREMVLEIIREKDQAD-FRGVRGDFSSRMGGGSLEVS 260
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P+ + A
Sbjct: 261 VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMGPPDRCQHAA 315
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST 365
+ ++ L+ +D +GG +A G W
Sbjct: 316 HVINELILTAQERD--------GFGG-------LAVARGRGRGRGDW------------- 347
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
S+ + PG + E++ A K G VIGKGG N+K + Q
Sbjct: 348 ----------------SVGT--PGGVQEIT------YTVPADKCGLVIGKGGENIKSINQ 383
Query: 426 ETGASIHVEDAPTDSDERVIRASAFEGL 453
++GA + ++ P + + +R G+
Sbjct: 384 QSGAHVELQRNPPPNTDPNLRIFTIRGI 411
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 160/432 (37%), Gaps = 123/432 (28%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 85 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTP------------ 132
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR G +D + S+ LL+P + VG
Sbjct: 133 -------ESIE---QAKRLLGQIVDR-----CRNGPGFHNDVDGSSTIQELLIPASKVGL 177
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G P ++A V ++
Sbjct: 178 VIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIR 234
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G GD
Sbjct: 235 EKDQAD-----------------------------------------------FRGVRGD 247
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SRMG GS+ P F++ I VIG+ G +K++Q + G I
Sbjct: 248 FSSRMGGGSLEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 290
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF------------------- 474
+ S ER + + I+ ++ + F
Sbjct: 291 KPDDGISPERAAQVMGPPDRCQHAAHVINELILTAQERDGFGGLAVARGRGRGRGDWSVG 350
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSE--- 531
+ G VP+ K G ++G+GG I + +++ GA V+LQ P +++
Sbjct: 351 TPGGVQEITYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPNTDPNL 403
Query: 532 CIVDIRGSSEHL 543
I IRG + +
Sbjct: 404 RIFTIRGIPQQI 415
Score = 46.6 bits (109), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q + G N G + A + + +G +IG+GG + ++Q
Sbjct: 49 PSVYGYGVQKRPLDDGVGNQL--GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQA 106
Query: 426 ETGASIHVEDAPTDSDER--VIRAS--AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
E+G I + + ER V+ + + E Q +D ++ TI
Sbjct: 107 ESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDVDGSSTI- 165
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
LL+P+SKVG ++G+GG I +++ RT + ++
Sbjct: 166 QELLIPASKVGLVIGKGGETIKQLQERTGVKMVMI 200
>gi|121710178|ref|XP_001272705.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
gi|119400855|gb|EAW11279.1| KH domain RNA binding protein [Aspergillus clavatus NRRL 1]
Length = 464
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 88/386 (22%), Positives = 151/386 (39%), Gaps = 84/386 (21%)
Query: 109 GNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
G+ ++S EQ + + R + S++ VIGK G V +R + AK TV+D
Sbjct: 93 GDRASSQPEQHRPQDESSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSR 152
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
G+ ER++ + S P QDA+ K II
Sbjct: 153 GAVERILTV-SGP----------------------------QDAVAKAFGLIIRTLNNEP 183
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+ + ++ T RLL+P+ ++G ++GK G I+ ++ +GA R+ +D P ++T
Sbjct: 184 LDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEASGA--RLNASDACLP--LST 239
Query: 289 DEMVQISGKPNVAKRALYEVS-TLLHQNPRKDKPPSS----------------------- 324
+ + I G + A Y V+ TL+ Q + P++
Sbjct: 240 ERSLVILGVADSVHIATYYVAVTLVEQLTERFGGPAASAYATRSGGPAGAVPGGMQVVPY 299
Query: 325 FPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS--LHG----------------MPSTP 366
PQ GGQ H P HP N + LHG P TP
Sbjct: 300 VPQPAGGQYGH--PETFKRHHPHPNRAAAGAYGVPYLHGQPAPAPVAQPALHYGATPHTP 357
Query: 367 WMGGYGDQPSRMGS-------GSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ G QP+ G+ G+ P + +I +G +IGKGG
Sbjct: 358 YAGAGPHQPAPYGAPQPAQSRGAPTPATPAGGVMPGQPLTQQIYIPNDMVGAIIGKGGAK 417
Query: 420 VKQLQQETGASIHVEDAPTDSDERVI 445
+ +++ +G+ I + + +S+ER++
Sbjct: 418 INEIRHLSGSVIKINEPQENSNERLV 443
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S+ ++ + S+ + VIGKGG NV Q+++ +GA V D + ER++ S G
Sbjct: 109 SSWIHIRAVISSQEAATVIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVS---GPQ 165
Query: 455 NPRSQTIDAILQLQNK----TSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
+ ++ I++ N ++ T RLL+P +G I+G+GG I E++ +
Sbjct: 166 DAVAKAFGLIIRTLNNEPLDAPSTAQSKTYPLRLLIPHILIGSIIGKGGSRIREIQEAS- 224
Query: 511 ADIRVVGARVKLQD 524
GAR+ D
Sbjct: 225 ------GARLNASD 232
Score = 42.0 bits (97), Expect = 1.00, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+T ++ +P+ VG I+G+GG INE+R + G+ +K+ +P S+E +V I G+
Sbjct: 396 LTQQIYIPNDMVGAIIGKGGAKINEIR-------HLSGSVIKINEPQENSNERLVTITGT 448
Query: 540 SE 541
E
Sbjct: 449 QE 450
>gi|386771595|ref|NP_001246876.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
gi|383292067|gb|AFH04547.1| mushroom-body expressed, isoform H [Drosophila melanogaster]
Length = 433
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 36/213 (16%)
Query: 106 IKKGNWSNSSREQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA 164
++ N S+S+ S + P+ T+ R++ +++G +IGK G IV REE+ AKI ++
Sbjct: 1 MEDNNTSSSAGGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINIS 60
Query: 165 DTIPGS-EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE 223
D GS ER++ + + I SA + E C+ + + KV
Sbjct: 61 D---GSCPERIVTVSGTTNAIF--------SAFTLITKKFEEWCSQFNDVGKVGK----- 104
Query: 224 DLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP 283
+ I RL+VP + G L+GK G I+ +R TG +I+V ++ LP
Sbjct: 105 --------------TQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV-ASEMLP- 148
Query: 284 CAMNTDEMVQISGKPNVAKRALYEVSTLLHQNP 316
+T+ V +SG + +Y++ ++ ++P
Sbjct: 149 --NSTERAVTLSGSAEQITQCIYQICLVMLESP 179
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G V + ++E+GA I++ D ER++ S G
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVS---GTT 75
Query: 455 NPRSQTIDAILQ-LQNKTSEFSEKGT-----ITTRLLVPSSKVGCILGQGGHVINEMRRR 508
N I + + S+F++ G I RL+VP+S+ G ++G+ G I E+R+
Sbjct: 76 NAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQT 135
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
T I+V + P S+E V + GS+E +
Sbjct: 136 TGCSIQVASEML------PNSTERAVTLSGSAEQI 164
Score = 43.5 bits (101), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
+ V N+++GC++GK G I +R +GA IR+ + NTD + ISG P+
Sbjct: 340 EMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERE--GGNTDRTITISGNPDSVA 397
Query: 303 RALYEVS 309
A Y ++
Sbjct: 398 LAQYLIN 404
>gi|198430105|ref|XP_002128022.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein K,
like [Ciona intestinalis]
Length = 323
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/151 (34%), Positives = 78/151 (51%), Gaps = 12/151 (7%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNPRS 458
M+ L A GG+IGKGG N+K ++ A I++ D +DS ERV+R SA E
Sbjct: 60 MRCLVPAKCAGGIIGKGGTNIKDMRDTFKAQINIPD--SDSRERVLRISASIESCGEILL 117
Query: 459 QTIDAILQLQ-NKTSEFSE--KGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+T+ I + N F K ++ +LLV S+ G I+G G I E+R +T A I+V
Sbjct: 118 RTLPVINEAALNGPGRFGRDPKDDMSIKLLVHQSQAGGIIGVKGFKIKELREKTGATIKV 177
Query: 516 VGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
QD P S++ + + GS+E + S
Sbjct: 178 ------QQDCCPNSTDRVCMVAGSAEIISSC 202
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 92/204 (45%), Gaps = 35/204 (17%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R L P++ GG+IGK G +K +R+ +A+I + D+ S ERV+ I +S
Sbjct: 61 RCLVPAKCAGGIIGKGGTNIKDMRDTFKAQINIPDS--DSRERVLRISASI--------- 109
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG-GMASDDDNENSTITARLLVPNN 249
+S E LL+ I E L G G D ++ +I +LLV +
Sbjct: 110 --ESCGEI--------------LLRTLPVINEAALNGPGRFGRDPKDDMSI--KLLVHQS 151
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G ++G +G I+ LR +TGA I+V + C +TD + ++G + + +
Sbjct: 152 QAGGIIGVKGFKIKELREKTGATIKV----QQDCCPNSTDRVCMVAGSAEIISSCVVLIL 207
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQN 333
LL P K P +F +G N
Sbjct: 208 ELLETIPPK-GPIQNFNPGFGFDN 230
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%), Gaps = 2/59 (3%)
Query: 388 PGQMG-EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERV 444
PG+ G + + S+K+L + GG+IG GF +K+L+++TGA+I V +D +S +RV
Sbjct: 131 PGRFGRDPKDDMSIKLLVHQSQAGGIIGVKGFKIKELREKTGATIKVQQDCCPNSTDRV 189
Score = 39.7 bits (91), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIY 178
FG D ++L + GG+IG G +K LRE+T A I V D P S +RV ++
Sbjct: 134 FGRDPKDDMSIKLLVHQSQAGGIIGVKGFKIKELREKTGATIKVQQDCCPNSTDRVCMVA 193
Query: 179 SSPTKIA 185
S I+
Sbjct: 194 GSAEIIS 200
>gi|336273542|ref|XP_003351525.1| hypothetical protein SMAC_00067 [Sordaria macrospora k-hell]
gi|380095805|emb|CCC05851.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 372
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 76/325 (23%), Positives = 141/325 (43%), Gaps = 51/325 (15%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R + S++ G +IGK G V +LR+ET K V+ + G +RV+ I ++K
Sbjct: 52 LRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVLTITGGCDAVSKA-- 109
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
+ A +LL+ + GG+ S N T +LL+ +N
Sbjct: 110 ----------------YAAVARSLLEGAPSV----GMGGVIS----ANGTHPLKLLISHN 145
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P +RA++E+
Sbjct: 146 QMGTVIGRQGLKIKHIQDVSG--VRMVAQKEMLP--QSTERVVEVQGTPEGIERAVWEIC 201
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMG 369
L + ++ + G P AP++ G ++P S +G G
Sbjct: 202 KCLVDDWQRGTGTVLYNPVVRG-----PGAPVSG----GERNYPQERS--YGSSRVTRTG 250
Query: 370 GYGDQPSRMGSGSIN--------SCPPGQMGEVSAEF-SMKILCSAGKIGGVIGKGGFNV 420
D S G + N S P E E + I A +G +IG+ G +
Sbjct: 251 NGADFSSNSGGRAYNRRSDSDAASRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKI 310
Query: 421 KQLQQETGASIHVEDAPTD-SDERV 444
++++++GA I + P D S ER+
Sbjct: 311 SEIRKQSGARISIAKGPHDESGERM 335
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 43/88 (48%), Gaps = 8/88 (9%)
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
D+N T + +P +MVGC++G+ G I +R ++GA I + P + + M
Sbjct: 281 DENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKQSGARISIAKG----PHDESGERMF 336
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKDK 320
I G + ALY LL++N +K
Sbjct: 337 TIMGSAKANETALY----LLYENLEAEK 360
Score = 42.4 bits (98), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 75/153 (49%), Gaps = 16/153 (10%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPR 457
+++ + S+ + G +IGKGG NV L+ ETG V +RV+ G +
Sbjct: 50 LTLRAIVSSKEAGVIIGKGGQNVANLRDETGVKAGVSKVVQGVHDRVL---TITGGCDAV 106
Query: 458 SQTIDAILQ--LQNKTS-----EFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
S+ A+ + L+ S S GT +LL+ +++G ++G+ G I + +
Sbjct: 107 SKAYAAVARSLLEGAPSVGMGGVISANGTHPLKLLISHNQMGTVIGRQGLKIKHI--QDV 164
Query: 511 ADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+ +R+V + L P S+E +V+++G+ E +
Sbjct: 165 SGVRMVAQKEML----PQSTERVVEVQGTPEGI 193
>gi|302508471|ref|XP_003016196.1| hypothetical protein ARB_05593 [Arthroderma benhamiae CBS 112371]
gi|291179765|gb|EFE35551.1| hypothetical protein ARB_05593 [Arthroderma benhamiae CBS 112371]
Length = 531
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 74/323 (22%), Positives = 136/323 (42%), Gaps = 49/323 (15%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ + G +RV+ +
Sbjct: 215 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG----------- 263
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
P A V ++E GM N N T + RLL+ +N
Sbjct: 264 --------------PLQGTSKAYSIVAKSLLEGAPQMGMGGVVQN-NGTHSVRLLISHNQ 308
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 309 MGTIIGRQGLKIKYIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAIWEIGK 364
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGG 370
L + ++ G ++P + G S N S G + G
Sbjct: 365 CLIDDWQRGT----------GTVLYNPAVRASVGSGSGQGSVTGTNPSYGGSSRSYNRTG 414
Query: 371 YG----DQPSRMGSGSINSCPPGQMGEVSAEF----SMKILCSAGKIGGVIGKGGFNVKQ 422
G D PS N P + V+ + + I + +G +IG+GG + +
Sbjct: 415 NGADFSDHPSSYSRRGNNDNPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISE 474
Query: 423 LQQETGASIHVEDAP-TDSDERV 444
+++ +GA I + AP D+ ER+
Sbjct: 475 IRRSSGARISIAKAPHDDTGERM 497
Score = 48.1 bits (113), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNP 456
+++ + S+ + G +IGK G NV L+ ETG V +RV+ + +G
Sbjct: 212 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKA 271
Query: 457 RSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
S ++L+ GT + RLL+ +++G I+G+ G I + + + +
Sbjct: 272 YSIVAKSLLEGAPQMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKYI--QDASGV 329
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
R+V + L P S+E IV+++G+ E + A
Sbjct: 330 RMVAQKEML----PQSTERIVEVQGTPEGIEKA 358
Score = 43.1 bits (100), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 50/230 (21%), Positives = 91/230 (39%), Gaps = 48/230 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKIAKT-- 187
R+L ++G +IG+ G +K +++ + ++ + +P S ER++ + +P I K
Sbjct: 301 RLLISHNQMGTIIGRQGLKIKYIQDASGVRMVAQKEMLPQSTERIVEVQGTPEGIEKAIW 360
Query: 188 ---QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED-LFGGMA------------- 230
+ DD T P A + + +GG +
Sbjct: 361 EIGKCLIDDWQRGTGTVLYNPAVRASVGSGSGQGSVTGTNPSYGGSSRSYNRTGNGADFS 420
Query: 231 ---------SDDDNENSTI-----------TARLLVPNNMVGCLLGKRGDVIQRLRSETG 270
++DN N I T + +P++MVGC++G+ G I +R +G
Sbjct: 421 DHPSSYSRRGNNDNPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGTKISEIRRSSG 480
Query: 271 ANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDK 320
A I + A P + M I G ++ALY LL++N +K
Sbjct: 481 ARISIAKA----PHDDTGERMFTIMGSAQANEKALY----LLYENLEAEK 522
Score = 42.4 bits (98), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +PS VGCI+G+GG I+E+RR + A I + A PH + E + I GS+
Sbjct: 451 TQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKA------PHDDTGERMFTIMGSA 504
Query: 541 E 541
+
Sbjct: 505 Q 505
>gi|328708265|ref|XP_001949890.2| PREDICTED: far upstream element-binding protein 1-like
[Acyrthosiphon pisum]
Length = 767
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 106/442 (23%), Positives = 173/442 (39%), Gaps = 108/442 (24%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
I P + +G + + G + L+ ET KI +A PG ER + + I T K
Sbjct: 113 EIKVPDKMVG--LSRGGGQISRLQAETGCKIQMAPDSPGLLERSCTLTGNAQSI--TLAK 168
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ K S+E A+ L + S ++ + A++++P
Sbjct: 169 ELIQNIVQNKVSVEGTGGAKIEGLNI--------------SSPPSQPAFTQAQIMIPGAK 214
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
VG ++GK G+ I+ L+ +GA + V+ + P + ++ ++ISG+ + A V
Sbjct: 215 VGLIIGKGGETIKMLQESSGAKMIVI---QDGPNSQENEKPLRISGETAKVEHAKKLVYD 271
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGG 370
+L DK SS NF S+W NS + M S G
Sbjct: 272 MLG----GDKDGSS--------NFDQ-----------NGSNWNGSNSGDYSMHS-----G 303
Query: 371 YGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGAS 430
YG G + P Q+ +G VIGKGG +K++Q +TGA
Sbjct: 304 YG--------GKVEVGVPKQV-----------------VGLVIGKGGDMIKKIQADTGAK 338
Query: 431 IHV----EDAPTD--------------SDERV--IRASAFEGLWNPRSQTIDAILQLQNK 470
+ ED P D + +R+ + SA N +S N+
Sbjct: 339 VQFINLNEDTPDDRRCLITGNPDQVAEAKQRIESLVDSALNRSGNRQSGGGGGGGGNFNR 398
Query: 471 TSEFSEKGTI----TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPH 526
+ G T VPS+K G I+G+GG I ++ +T GA ++ H
Sbjct: 399 NQSWGNSGQTQPLNETTFTVPSAKCGVIIGKGGETIKQINMQT-------GAHCEIDRRH 451
Query: 527 --PGSSECIVDIRGSSEHLISA 546
GS + V IRG++E + +A
Sbjct: 452 NNTGSEKTFV-IRGTTEQIENA 472
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 77/318 (24%), Positives = 121/318 (38%), Gaps = 74/318 (23%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPT 182
SQPA T +I+ P K+G +IGK G +K L+E + AK+ V P S+E P
Sbjct: 199 SQPAFTQAQIMIPGAKVGLIIGKGGETIKMLQESSGAKMIVIQDGPNSQEN-----EKPL 253
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG----GMASDDDNENS 238
+I + ET K D L D D G G S D + +S
Sbjct: 254 RI----------SGETAKVEHAKKLVY-DMLGGDKDGSSNFDQNGSNWNGSNSGDYSMHS 302
Query: 239 TITARLL--VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
++ VP +VG ++GK GD+I++++++TGA ++ + + P D I+G
Sbjct: 303 GYGGKVEVGVPKQVVGLVIGKGGDMIKKIQADTGAKVQFINLNEDTP----DDRRCLITG 358
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN 356
P+ A + +L+ + S GG NF+ N SW
Sbjct: 359 NPDQVAEAKQRIESLVDSALNRSGNRQSGGGGGGGGNFNR------------NQSW---- 402
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
G G+ + K G +IGKG
Sbjct: 403 --------------------------------GNSGQTQPLNETTFTVPSAKCGVIIGKG 430
Query: 417 GFNVKQLQQETGASIHVE 434
G +KQ+ +TGA ++
Sbjct: 431 GETIKQINMQTGAHCEID 448
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 86/192 (44%), Gaps = 30/192 (15%)
Query: 385 SCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGAS-IHVEDAP-TDSDE 442
S PP Q A+ I+ K+G +IGKGG +K LQ+ +GA I ++D P + +E
Sbjct: 195 SSPPSQPAFTQAQ----IMIPGAKVGLIIGKGGETIKMLQESSGAKMIVIQDGPNSQENE 250
Query: 443 RVIRASAFEG-LWNPRSQTIDAILQLQNKTSEFSEKGTI-----------------TTRL 484
+ +R S + + + D + ++ +S F + G+ +
Sbjct: 251 KPLRISGETAKVEHAKKLVYDMLGGDKDGSSNFDQNGSNWNGSNSGDYSMHSGYGGKVEV 310
Query: 485 LVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
VP VG ++G+GG +I +++ T A ++ + L + P C+ I G+ + +
Sbjct: 311 GVPKQVVGLVIGKGGDMIKKIQADTGAKVQF----INLNEDTPDDRRCL--ITGNPDQVA 364
Query: 545 SAHGTYQSFMTS 556
A +S + S
Sbjct: 365 EAKQRIESLVDS 376
>gi|354475601|ref|XP_003500016.1| PREDICTED: poly(rC)-binding protein 2-like [Cricetulus griseus]
Length = 325
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 84/159 (52%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++A + ++L ++G +I K G +VK++++E+GA + D + ER+I A
Sbjct: 8 GGLNATLTSRLLMHGKEVGSIIAKKGESVKKMREESGARTSISDG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + + RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEGISSSMTNSTA--ASRPPVALRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + LI
Sbjct: 124 RESTGAQVQVAG------DMLPNSTEWAITIAGIPQSLI 156
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 81/338 (23%), Positives = 137/338 (40%), Gaps = 55/338 (16%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A R+L +++G +I K G VK +REE+ A+ +++D G+ II + PT
Sbjct: 12 ATLTSRLLMHGKEVGSIIAKKGESVKKMREESGARTSISD---GNCPERIITLAGPT--- 65
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITA 242
+A+ K II EE + M + +
Sbjct: 66 -------------------------NAIFKAFAMIIDKLEEGISSSMTNSTAASRPPVAL 100
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
RL+VP + G L+GK G I+ +R TGA ++V D LP +T+ + I+G P
Sbjct: 101 RLVVPASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STEWAITIAGIPQSLI 156
Query: 303 RALYEVSTLL--------HQNPR------KDKPPSSFPQAYGGQNFHSPPAPMADMHPLG 348
+ ++ ++ H +P+ + KP SS GGQ+ +S + A P
Sbjct: 157 ECVKQICVVMLETLSQPPHPHPKGLTITYRPKPSSSLVIFAGGQDRYSTGSDSASF-PHT 215
Query: 349 NSSWPARNSSLHGMP-STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAG 407
S N L G P + Q S N+ + + S ++ S
Sbjct: 216 TQSM-CLNPDLEGPPLELTKLHQLALQQSHFPMTHGNTGFSAGLDASAQTTSHELTISND 274
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + S +R +
Sbjct: 275 LIGCIIGRQGAKINEIRQMSGAQIKTANPVEGSTDRQV 312
>gi|326378247|gb|ADZ57223.1| neuro-oncological ventral antigen [Branchiostoma lanceolatum]
Length = 508
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/257 (24%), Positives = 111/257 (43%), Gaps = 53/257 (20%)
Query: 113 NSSREQSFGNSQPAD--TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTI 167
NS R G P D + ++L PS G +IGK G + L++ET A I ++ D
Sbjct: 49 NSKRSNFGGEGGPEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFY 108
Query: 168 PGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
PG+ ER+++I S +D+L VH ++E+
Sbjct: 109 PGTTERIVVITGS-----------------------------EDSLKSVHKFLMEKI--- 136
Query: 228 GMA---------SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA 278
G A + N N +++VPN+ G ++GK G I+ + +TG+ +++
Sbjct: 137 GQAPRPPAKSPSEQNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQI--- 193
Query: 279 DRLPPCAMNTDE-MVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSP 337
+ +N E ++ I+G+P +A + + ++P+ P+ Y G ++
Sbjct: 194 SQKATSGINLPERVITITGEPEQNDKACAFIVNKIVEDPQSGSCPNISYATYTGPVANAN 253
Query: 338 P--APMAD-MHPLGNSS 351
P +P A M PL N S
Sbjct: 254 PTGSPYASPMSPLQNGS 270
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 18/141 (12%)
Query: 389 GQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA----PTDSDERV 444
G+ G + +K+L + G +IGKGG + QLQ+ETGA+I + + P ++ V
Sbjct: 57 GEGGPEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIV 116
Query: 445 IRASAFEGLWNPRSQTIDAILQL----------QNKTSEFSEKGTITTRLLVPSSKVGCI 494
+ + + L + ++ I Q QN + +++ +++VP+S G I
Sbjct: 117 VITGSEDSLKSVHKFLMEKIGQAPRPPAKSPSEQNANNNRAKQ----VKIVVPNSTAGLI 172
Query: 495 LGQGGHVINEMRRRTQADIRV 515
+G+GG I + +T + +++
Sbjct: 173 IGKGGATIKFIMEQTGSRVQI 193
>gi|357507883|ref|XP_003624230.1| Poly(rC)-binding protein [Medicago truncatula]
gi|355499245|gb|AES80448.1| Poly(rC)-binding protein [Medicago truncatula]
gi|388513455|gb|AFK44789.1| unknown [Medicago truncatula]
Length = 193
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 13/102 (12%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D ++RI+ PS++IG VIGK G ++ +RE T+A I +AD I EERVIII S
Sbjct: 99 DVIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISS------- 151
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
KD+D ++++E + +LK+ ++ ++L G
Sbjct: 152 ---KDNDEMVTDAEKALE---QIANLILKIIAVLMHQNLLQG 187
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 8/84 (9%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA-----DRLPPC-AMNTDEMVQ 293
+ R++VP+ +G ++GK G IQ++R T ANI++ A +R+ + + DEMV
Sbjct: 100 VIFRIVVPSKQIGKVIGKEGCRIQKIREMTRANIKIADAIARHEERVIIISSKDNDEMVT 159
Query: 294 ISGKP--NVAKRALYEVSTLLHQN 315
+ K +A L ++ L+HQN
Sbjct: 160 DAEKALEQIANLILKIIAVLMHQN 183
>gi|440634730|gb|ELR04649.1| hypothetical protein GMDG_06931 [Geomyces destructans 20631-21]
Length = 473
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 89/360 (24%), Positives = 149/360 (41%), Gaps = 80/360 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S + VIGK G V +R+ + AK TV+D G+ ER++ +
Sbjct: 122 RAVISSAEAATVIGKGGENVTLIRKMSGAKCTVSDYQKGAVERILTV------------- 168
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN--ENSTITARLLVPN 248
DA K II G D + ++ T RLLVP+
Sbjct: 169 ----------------SGVVDAAAKAFGLIIR--TLNGEPLDQPSTPQSRTYPLRLLVPH 210
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
++G ++GK G I+ ++ ++GA R+ +D P ++T+ V + G + A Y V
Sbjct: 211 VLIGSIIGKGGVRIREIQEQSGA--RLNASDACLP--LSTERSVVVLGVADAVHIATYYV 266
Query: 309 -STLLHQNPRKDKPPSS-----------------------FPQAYGGQNFH--------- 335
STLL Q + P++ PQ GG H
Sbjct: 267 ASTLLEQLTERFGGPTASAYATRSGGPAGVIPGGMQVVPYVPQPAGGNYGHPDNVRHNDI 326
Query: 336 -SPPAPMADM-HPLGNSSWPAR-NSSLH--GMPSTPWMGGYGDQPSRMGSG--SINSCPP 388
S P A P P + +S+H G P+ + G QP ++G G + ++ PP
Sbjct: 327 RSRQTPAAQYGQPYAQGPGPQQGGASMHYGGSPAAGYGGVAPQQPQQVGHGGPASHAGPP 386
Query: 389 GQ--MGEVSAE-FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
Q G V + + +I +G +IGKGG + +++Q +G+ I + + +S+ER++
Sbjct: 387 AQPMQGVVPGQPLTQQIYIPNDMVGAIIGKGGAKINEIRQLSGSVIKINEPQDNSNERLV 446
Score = 47.0 bits (110), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S+ ++ + S+ + VIGKGG NV +++ +GA V D + ER++ S G+
Sbjct: 116 SSWIHIRAVISSAEAATVIGKGGENVTLIRKMSGAKCTVSDYQKGAVERILTVS---GVV 172
Query: 455 NPRSQTIDAILQLQN----KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
+ ++ I++ N + T RLLVP +G I+G+GG I E++ ++
Sbjct: 173 DAAAKAFGLIIRTLNGEPLDQPSTPQSRTYPLRLLVPHVLIGSIIGKGGVRIREIQEQS- 231
Query: 511 ADIRVVGARVKLQD 524
GAR+ D
Sbjct: 232 ------GARLNASD 239
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 39/62 (62%), Gaps = 7/62 (11%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+T ++ +P+ VG I+G+GG INE+R+ + G+ +K+ +P S+E +V I G+
Sbjct: 399 LTQQIYIPNDMVGAIIGKGGAKINEIRQLS-------GSVIKINEPQDNSNERLVTITGT 451
Query: 540 SE 541
+E
Sbjct: 452 AE 453
>gi|410924031|ref|XP_003975485.1| PREDICTED: uncharacterized protein LOC101068273 [Takifugu rubripes]
Length = 652
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 33/194 (17%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSP 181
N P TV I+ P+ K G VIGK G +KSL+E K+ ++I P
Sbjct: 171 NDGPGMTVQEIMIPASKAGLVIGKGGETIKSLQERAGVKM-------------VMIQDGP 217
Query: 182 TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL--FGGMASDDDNENST 239
QN D E + A + + + D+ E +G D
Sbjct: 218 ------QNTGADKPLRISGEPFKVQQAKEMVMDLIRDQGFREQRGEYGSRVGGD------ 265
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ + VP VG ++G+ G++I++++++TG I+ P D P D + QI G PN
Sbjct: 266 -SLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGSTP-----DRIAQIMGPPN 319
Query: 300 VAKRALYEVSTLLH 313
A+ A ++ LL
Sbjct: 320 QAQHAADIITDLLR 333
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 66/142 (46%), Gaps = 27/142 (19%)
Query: 389 GQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS 448
G MG S + G +G +IG+GG + +LQQE+G I + AP DS R+
Sbjct: 83 GGMGGPPRSVSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQI--AP-DSGGMPDRSV 139
Query: 449 AFEGLWNPRS-QTIDAILQLQNKTSEFSEK-------------GTITTRLLVPSSKVGCI 494
GL P S QT +L +E EK G +++P+SK G +
Sbjct: 140 TLTGL--PESIQTAKRLL------TEIVEKGRPAPAFNPNDGPGMTVQEIMIPASKAGLV 191
Query: 495 LGQGGHVINEMRRRTQADIRVV 516
+G+GG I ++ R A +++V
Sbjct: 192 IGKGGETIKSLQER--AGVKMV 211
Score = 42.0 bits (97), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+++ VP+ MVG ++G+ G+ I RL+ E+G I++ P P D V ++G P
Sbjct: 91 SVSEEFKVPDGMVGFIIGRGGEQISRLQQESGCKIQIAPDSGGMP-----DRSVTLTGLP 145
Query: 299 N---VAKRALYEV 308
AKR L E+
Sbjct: 146 ESIQTAKRLLTEI 158
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 69/145 (47%), Gaps = 15/145 (10%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGAS-IHVEDAP--TDSDERV-IRASAFEGLWNP 456
+I+ A K G VIGKGG +K LQ+ G + ++D P T +D+ + I F+ +
Sbjct: 180 EIMIPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPFK-VQQA 238
Query: 457 RSQTIDAILQ--LQNKTSEFSEK-GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ +D I + + E+ + G + + VP VG ++G+ G +I +++ T
Sbjct: 239 KEMVMDLIRDQGFREQRGEYGSRVGGDSLDVPVPRFAVGIVIGRNGEMIKKIQNDT---- 294
Query: 514 RVVGARVKLQDPHPGSSECIVDIRG 538
G R++ + + + I I G
Sbjct: 295 ---GVRIQFKPDDGSTPDRIAQIMG 316
>gi|17737727|ref|NP_524208.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
gi|1770212|emb|CAA67719.1| nucleic acid binding protein [Drosophila melanogaster]
gi|7296507|gb|AAF51792.1| mushroom-body expressed, isoform A [Drosophila melanogaster]
Length = 386
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 101/213 (47%), Gaps = 36/213 (16%)
Query: 106 IKKGNWSNSSREQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA 164
++ N S+S+ S + P+ T+ R++ +++G +IGK G IV REE+ AKI ++
Sbjct: 1 MEDNNTSSSAGGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINIS 60
Query: 165 DTIPGS-EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE 223
D GS ER++ + + I SA + E C+ + + KV
Sbjct: 61 D---GSCPERIVTVSGTTNAIF--------SAFTLITKKFEEWCSQFNDVGKVGK----- 104
Query: 224 DLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP 283
+ I RL+VP + G L+GK G I+ +R TG +I+V ++ LP
Sbjct: 105 --------------TQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV-ASEMLPN 149
Query: 284 CAMNTDEMVQISGKPNVAKRALYEVSTLLHQNP 316
+T+ V +SG + +Y++ ++ ++P
Sbjct: 150 ---STERAVTLSGSAEQITQCIYQICLVMLESP 179
Score = 58.9 bits (141), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 78/155 (50%), Gaps = 17/155 (10%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G V + ++E+GA I++ D ER++ S G
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVS---GTT 75
Query: 455 NPRSQTIDAILQ-LQNKTSEFSEKGT-----ITTRLLVPSSKVGCILGQGGHVINEMRRR 508
N I + + S+F++ G I RL+VP+S+ G ++G+ G I E+R+
Sbjct: 76 NAIFSAFTLITKKFEEWCSQFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQT 135
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
T I+V + P S+E V + GS+E +
Sbjct: 136 TGCSIQVASEML------PNSTERAVTLSGSAEQI 164
Score = 43.5 bits (101), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ V N+++GC++GK G I +R +GA IR+ + NTD + ISG P+
Sbjct: 294 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERE--GGNTDRTITISGNPDSVAL 351
Query: 304 ALYEVS 309
A Y ++
Sbjct: 352 AQYLIN 357
>gi|326510613|dbj|BAJ87523.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326528939|dbj|BAJ97491.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 360
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/317 (24%), Positives = 136/317 (42%), Gaps = 53/317 (16%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKI 184
T R L + G +IGK G+ + + ++ A+I ++ + PG+ +R+I++
Sbjct: 49 THLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMV------- 101
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
D ++K + ++E+ L G S++ RL
Sbjct: 102 ----------------------SGLFDEVVKAMELVLEKLLSEGEESNEAEARPKF--RL 137
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
+VPN+ G ++GK G I+ ++ A I++ P D D +V I+G N RA
Sbjct: 138 VVPNSSCGGIIGKGGATIKSFIEDSHAGIKISPQDN--NFVGLHDRLVTITGPLNSQMRA 195
Query: 305 LYEVSTLLHQNPRKDKPPS-SFPQAYGGQNFHSPPAPMADMHPLGNSSWPA-RNSSLHGM 362
++ + + L ++ PP+ S P Y G F S PA + P+G P N++++
Sbjct: 196 IHLILSKLSEDVH--YPPNLSSPFPYAGLGFPSYPAAV----PVGYMIPPVPYNNTVNYG 249
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPG----QMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
P+ GY G G + PG A+ S I + IG V+G+ G
Sbjct: 250 PN-----GYAAPGGGGGGGRYQNNKPGTPVRSPANNDAQESHTIGVADEHIGAVVGRAGR 304
Query: 419 NVKQLQQETGASIHVED 435
N+ ++ Q +GA I + D
Sbjct: 305 NITEIIQASGARIKISD 321
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV----EDAPTDSDERVIRASAFEGLWN 455
++ L S G +IGKGG + Q ++GA I + E P +D ++ + F+ +
Sbjct: 51 LRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPGTNDRIIMVSGLFDEVVK 110
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
++ +L +++E + RL+VP+S G I+G+GG I + A I++
Sbjct: 111 AMELVLEKLLSEGEESNEAEARPKF--RLVVPNSSCGGIIGKGGATIKSFIEDSHAGIKI 168
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 10/67 (14%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPH---PGSSECIVDIRGS 539
R LV ++ GCI+G+GG IN+ + ++ GAR++L H PG+++ I+ + G
Sbjct: 52 RFLVSNTAAGCIIGKGGSTINDFQSQS-------GARIQLSRSHEFFPGTNDRIIMVSGL 104
Query: 540 SEHLISA 546
+ ++ A
Sbjct: 105 FDEVVKA 111
Score = 39.3 bits (90), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 3/65 (4%)
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
+DD E T R LV N GC++GK G I +S++GA I++ + P D +
Sbjct: 42 EDDKEKPT-HLRFLVSNTAAGCIIGKGGSTINDFQSQSGARIQLSRSHEFFPG--TNDRI 98
Query: 292 VQISG 296
+ +SG
Sbjct: 99 IMVSG 103
>gi|348521966|ref|XP_003448497.1| PREDICTED: far upstream element-binding protein 1 [Oreochromis
niloticus]
Length = 631
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 83/194 (42%), Gaps = 33/194 (17%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSP 181
N P TV I+ P+ K G VIGK G +KSL+E K+ ++I P
Sbjct: 167 NDGPGMTVQEIMVPASKAGLVIGKGGETIKSLQERAGVKM-------------VMIQDGP 213
Query: 182 TKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL--FGGMASDDDNENST 239
QN D E + A + + + D+ E +G D
Sbjct: 214 ------QNTGADKPLRISGEPFKVQQAKEMVMELIRDQGFREQRGEYGSRIGGD------ 261
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ + VP VG ++G+ G++I++++++TG I+ P D P D + QI G P+
Sbjct: 262 -SLDVPVPRFAVGIVIGRNGEMIKKIQNDTGVRIQFKPDDGTTP-----DRIAQIMGPPD 315
Query: 300 VAKRALYEVSTLLH 313
A+ A +S LL
Sbjct: 316 QAQHAAEIISDLLR 329
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 61/124 (49%), Gaps = 27/124 (21%)
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRS-QTIDAIL 465
G +G +IG+GG + +LQQE+G I + AP DS R+ GL P S QT +L
Sbjct: 97 GMVGFIIGRGGEQISRLQQESGCKIQI--AP-DSGGMPDRSVTLTGL--PESIQTAKRLL 151
Query: 466 QLQNKTSEFSEK-------------GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+E EK G ++VP+SK G ++G+GG I ++ R A
Sbjct: 152 ------TEIVEKGRPAPAFHHNDGPGMTVQEIMVPASKAGLVIGKGGETIKSLQER--AG 203
Query: 513 IRVV 516
+++V
Sbjct: 204 VKMV 207
Score = 43.1 bits (100), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 31/102 (30%), Positives = 48/102 (47%), Gaps = 9/102 (8%)
Query: 210 QDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSET 269
+DA ++ D F G+ ST + VP+ MVG ++G+ G+ I RL+ E+
Sbjct: 59 EDADQPETKKVATNDAFSGIGGMAGPPRST-SEEFKVPDGMVGFIIGRGGEQISRLQQES 117
Query: 270 GANIRVLPADRLPPCAMNTDEMVQISGKPN---VAKRALYEV 308
G I++ P P D V ++G P AKR L E+
Sbjct: 118 GCKIQIAPDSGGMP-----DRSVTLTGLPESIQTAKRLLTEI 154
Score = 41.2 bits (95), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 16/125 (12%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGAS-IHVEDAP--TDSDERV-IRASAFEGLWNP 456
+I+ A K G VIGKGG +K LQ+ G + ++D P T +D+ + I F+
Sbjct: 176 EIMVPASKAGLVIGKGGETIKSLQERAGVKMVMIQDGPQNTGADKPLRISGEPFK----- 230
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITTRL-------LVPSSKVGCILGQGGHVINEMRRRT 509
Q + +++L ++G +R+ VP VG ++G+ G +I +++ T
Sbjct: 231 VQQAKEMVMELIRDQGFREQRGEYGSRIGGDSLDVPVPRFAVGIVIGRNGEMIKKIQNDT 290
Query: 510 QADIR 514
I+
Sbjct: 291 GVRIQ 295
>gi|386771593|ref|NP_730700.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|442634089|ref|NP_001262197.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
gi|383292066|gb|AAN12194.2| mushroom-body expressed, isoform G [Drosophila melanogaster]
gi|440216174|gb|AGB94890.1| mushroom-body expressed, isoform M [Drosophila melanogaster]
Length = 359
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 81/344 (23%), Positives = 145/344 (42%), Gaps = 66/344 (19%)
Query: 110 NWSNSSREQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIP 168
N S+S+ S + P+ T+ R++ +++G +IGK G IV REE+ AKI ++D
Sbjct: 5 NTSSSAGGASIKHEDPSVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISD--- 61
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
GS I+ S T A A + + E + G
Sbjct: 62 GSCPERIVTVSGTTN------------------------AIFSAFTLITKKFEEFNDVGK 97
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+ + I RL+VP + G L+GK G I+ +R TG +I+V ++ LP +T
Sbjct: 98 VG------KTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTTGCSIQV-ASEMLPN---ST 147
Query: 289 DEMVQISGKPNVAKRALYEVSTLLHQN-------PRKDKPPSSFP------QAYGGQNFH 335
+ V +SG + +Y++ ++ ++ P + KP + P QA+ Q +
Sbjct: 148 ERAVTLSGSAEQITQCIYQICLVMLESPPRGATIPYRPKPQVTGPVILANGQAFTIQGNY 207
Query: 336 SPPAPMADMHPLGNSSWPARN----SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQM 391
+ P +PL + + +S G+ T G Q + + P
Sbjct: 208 AVPTQEVAKNPLASLAALGLAGMNPASTGGINHTALAALAGSQ--------LRTANPANR 259
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
+ + ++ S IG +IGKGG + +++Q +GA I + +
Sbjct: 260 AQ---QQQHEMTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISN 300
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 77/154 (50%), Gaps = 19/154 (12%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S +++++ ++G +IGK G V + ++E+GA I++ D ER++ S G
Sbjct: 21 SVTLTIRLIMQGKEVGSIIGKKGEIVNRFREESGAKINISDG--SCPERIVTVS---GTT 75
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGT-----ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
N A + K EF++ G I RL+VP+S+ G ++G+ G I E+R+ T
Sbjct: 76 NA---IFSAFTLITKKFEEFNDVGKVGKTQIPIRLIVPASQCGSLIGKSGSKIKEIRQTT 132
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
I+V + P S+E V + GS+E +
Sbjct: 133 GCSIQVASEML------PNSTERAVTLSGSAEQI 160
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ V N+++GC++GK G I +R +GA IR+ + NTD + ISG P+
Sbjct: 267 MTVSNDLIGCIIGKGGTKIAEIRQISGAMIRISNCEERE--GGNTDRTITISGNPDSVAL 324
Query: 304 ALYEVS 309
A Y ++
Sbjct: 325 AQYLIN 330
>gi|225682425|gb|EEH20709.1| KH domain RNA-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 364
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ + G +RV+ +
Sbjct: 48 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG----------- 96
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIE---EDLFGGMASDDDNENSTITARLLVP 247
P A A V ++E + GG+ S+ N T RLL+
Sbjct: 97 --------------PLQGAAKAYAIVAKSLLEGAPQLGMGGVVSN----NGTHPVRLLIS 138
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+N +G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E
Sbjct: 139 HNQMGTIIGRQGLKIKYIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAVWE 194
Query: 308 VSTLLHQNPRKDKPPSSFPQAY----GGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
+ L + ++ + A GG ++ G S+ N + +G
Sbjct: 195 IGKCLIDDWQRGTGTVLYNPAVRASVGGAPINNSLGSGGSSGGYGGRSY---NRTGNGAD 251
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
+ GGY R S + N P + + I + +G +IG+GG + ++
Sbjct: 252 FSDQTGGY---SRRSNSDAANRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEI 308
Query: 424 QQETGASIHVEDAPTD 439
++ +GA I + AP D
Sbjct: 309 RRSSGARISIAKAPHD 324
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNP 456
+++ + S+ + G +IGK G NV L+ ETG V +RV+ + +G
Sbjct: 45 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGAAKA 104
Query: 457 RSQTIDAILQLQ---NKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ ++L+ S GT RLL+ +++G I+G+ G I + + + +
Sbjct: 105 YAIVAKSLLEGAPQLGMGGVVSNNGTHPVRLLISHNQMGTIIGRQGLKIKYI--QDASGV 162
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
R+V + L P S+E IV+++G+ E + A
Sbjct: 163 RMVAQKEML----PQSTERIVEVQGTPEGIEKA 191
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 284 TQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKA----PHDETGERMFTIMGSAAA 339
Query: 301 AKRALYEVSTLLHQNPRKDK 320
++ALY LL++N +K
Sbjct: 340 NEKALY----LLYENLEAEK 355
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +PS VGCI+G+GG I+E+RR + A I + A PH + E + I GS+
Sbjct: 284 TQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKA------PHDETGERMFTIMGSA 337
>gi|449447567|ref|XP_004141539.1| PREDICTED: uncharacterized protein LOC101203078 [Cucumis sativus]
gi|449481514|ref|XP_004156205.1| PREDICTED: uncharacterized LOC101203078 [Cucumis sativus]
Length = 787
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/282 (24%), Positives = 122/282 (43%), Gaps = 46/282 (16%)
Query: 114 SSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV---ADTIPGS 170
S+ EQ +S+ T Y++ P+ K+G +IGKAG+ ++ L+ + AKI + A+ P
Sbjct: 173 SNAEQDQPSSESETTTYKMEVPNSKVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEADPNR 232
Query: 171 EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMA 230
R + I + I K + + AE P A+ L H E +
Sbjct: 233 LTRPVEIIGTSENIKKAEELINAVIAEADA-GGSPSLIAR-GLTSSHSIATAEQI----- 285
Query: 231 SDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE 290
+L VPN VG ++G+ G+ I+ L++ +GA I+++P + LP + +
Sbjct: 286 ------------QLQVPNEKVGLIIGRGGETIKSLQTRSGARIQLIPQN-LPEGDESKER 332
Query: 291 MVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSF------PQAYGG--QNFHSPPAPMA 342
++++G + A + +++Q R + F P+ GG Q H P P
Sbjct: 333 TIRVTGDKKQIEIATDMIKEVMNQTVRPSPHSTGFNQQAYRPRGPGGPTQWGHRGPHP-- 390
Query: 343 DMHPLG-----NSSWPARNSSLHGMPSTPWMGGYGDQPSRMG 379
HP G +P+ N+ GYG+ P +MG
Sbjct: 391 -SHPAGYDYPHRGPYPSHNTQYQ-------HPGYGNYPQQMG 424
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 3/132 (2%)
Query: 148 NIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHC 207
+ +S EE A + V G+E+ + + DSAAE +E
Sbjct: 92 DYKQSSEEEPPASVEVLPEKEGTEQPTEEPHEAGDAQDSAAEISQDSAAEISQEDKTQEL 151
Query: 208 A---AQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQR 264
+ +Q + ++ + EED+ +E+ T T ++ VPN+ VG L+GK GD I+
Sbjct: 152 SKEESQPSEVEAAPPLQEEDISNAEQDQPSSESETTTYKMEVPNSKVGVLIGKAGDTIRY 211
Query: 265 LRSETGANIRVL 276
L+ +GA I+++
Sbjct: 212 LQYNSGAKIQIM 223
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 26/138 (18%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTDSDERVIRASAFEGLWNP 456
+ M++ S K+G +IGK G ++ LQ +GA I + DA D + R+ R G
Sbjct: 189 YKMEVPNS--KVGVLIGKAGDTIRYLQYNSGAKIQIMRDAEADPN-RLTRPVEIIGT--- 242
Query: 457 RSQTIDAILQLQNKTSEFSEKG--------------TITT----RLLVPSSKVGCILGQG 498
S+ I +L N ++ G +I T +L VP+ KVG I+G+G
Sbjct: 243 -SENIKKAEELINAVIAEADAGGSPSLIARGLTSSHSIATAEQIQLQVPNEKVGLIIGRG 301
Query: 499 GHVINEMRRRTQADIRVV 516
G I ++ R+ A I+++
Sbjct: 302 GETIKSLQTRSGARIQLI 319
>gi|297592144|gb|ADI46928.1| CRB1m [Volvox carteri f. nagariensis]
Length = 499
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 90/188 (47%), Gaps = 21/188 (11%)
Query: 381 GSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPTD 439
GS + PPG + E + C G +G VIG+GG ++ LQQ +GA I V +D P
Sbjct: 192 GSNEAVPPG-----TGEVQETVECPPGIVGRVIGRGGETIRTLQQASGAHILVNQDFPDG 246
Query: 440 SDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEK-GTITTRLL-VPSSKVGCILGQ 497
+++ A + + S + I Q T ++ G +T ++ P + VG ++G+
Sbjct: 247 VPRQIVITGAQDAVQRATSMVSELIQGDQGNTQSIIQRFGVGSTEVVECPKAMVGRVIGK 306
Query: 498 GGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSG 557
GG I ++++R A I++ GS+ C + I G ++ + SA + +
Sbjct: 307 GGETIKDLQKRFSASIQI----------DQGSTPCKITITGPAQTVSSARRAIEDLI--- 353
Query: 558 QSMKVQPS 565
++ VQPS
Sbjct: 354 RAATVQPS 361
>gi|149236405|ref|XP_001524080.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452456|gb|EDK46712.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 399
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 74/341 (21%), Positives = 144/341 (42%), Gaps = 85/341 (24%)
Query: 107 KKGNWSNSSREQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA 164
+ ++ NS+ S + AD + YR+L +++ G +IG+ G ++ S+R ET K ++
Sbjct: 101 QDADYDNSAALPSLDDKSNADALINYRVLVSAKEAGCLIGQNGGVIDSIRNETNTKAGIS 160
Query: 165 DTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED 224
PG+ ER++ + K DDS A+ + C D+ +++++ +
Sbjct: 161 RLTPGTHERILTV----------SGKLDDS-AKALSYFAQALC---DSAIELYNYFPLKQ 206
Query: 225 LFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPC 284
L +S E T RLL+PN+ +G L+G +G IQ+++ G + ++ + P
Sbjct: 207 L----SSTPCVEGETTIIRLLIPNSQMGTLIGSKGARIQQIQQSFG--VSMIASKLFLPG 260
Query: 285 AMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADM 344
+ + +V++ G + +L +S L ++ F + G ++ P +
Sbjct: 261 S--NERLVELQGTVDDLYDSLRVISRCLIED---------FSSSVGTTTYYVPRS----- 304
Query: 345 HPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILC 404
H M +R + +IN P M
Sbjct: 305 ---------------HQM-------------TRKSTATIN--FPNDM------------- 321
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
+G +IGK G ++ +++ +GA I + +A SDERV
Sbjct: 322 ----VGALIGKNGSRIQGVRKVSGAMIGISEAEDGSDERVF 358
Score = 42.4 bits (98), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 36/160 (22%), Positives = 79/160 (49%), Gaps = 18/160 (11%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-----AF 450
A + ++L SA + G +IG+ G + ++ ET + + ER++ S +
Sbjct: 122 ALINYRVLVSAKEAGCLIGQNGGVIDSIRNETNTKAGISRLTPGTHERILTVSGKLDDSA 181
Query: 451 EGLWNPRSQTIDAILQLQN-------KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVIN 503
+ L D+ ++L N ++ E T RLL+P+S++G ++G G I
Sbjct: 182 KALSYFAQALCDSAIELYNYFPLKQLSSTPCVEGETTIIRLLIPNSQMGTLIGSKGARIQ 241
Query: 504 EMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
++++ + ++ +++ L PGS+E +V+++G+ + L
Sbjct: 242 QIQQ--SFGVSMIASKLFL----PGSNERLVELQGTVDDL 275
>gi|295660901|ref|XP_002791006.1| KH domain RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226280933|gb|EEH36499.1| KH domain RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 364
Score = 63.9 bits (154), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 73/316 (23%), Positives = 137/316 (43%), Gaps = 46/316 (14%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ + G +RV+ +
Sbjct: 48 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG----------- 96
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIE---EDLFGGMASDDDNENSTITARLLVP 247
P A A V ++E + GG+ S+ N T RLL+
Sbjct: 97 --------------PLQGAAKAYAIVAKSLLEGAPQLGMGGVVSN----NGTHPVRLLIS 138
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+N +G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E
Sbjct: 139 HNQMGTIIGRQGLKIKYIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAVWE 194
Query: 308 VSTLLHQNPRKDKPPSSFPQAY----GGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
+ L + ++ + A GG ++ A G S+ N + +G
Sbjct: 195 IGKCLIDDWQRGTGTVLYNPAVRASVGGAPINNSLGSGASSGGYGGRSY---NRTGNGAD 251
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
+ GGY R S + N P + + I + +G +IG+GG + ++
Sbjct: 252 FSDQTGGY---SRRSNSDAANRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEI 308
Query: 424 QQETGASIHVEDAPTD 439
++ +GA I + AP D
Sbjct: 309 RRSSGARISIAKAPHD 324
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNP 456
+++ + S+ + G +IGK G NV L+ ETG V +RV+ + +G
Sbjct: 45 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGAAKA 104
Query: 457 RSQTIDAILQLQ---NKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ ++L+ S GT RLL+ +++G I+G+ G I + + + +
Sbjct: 105 YAIVAKSLLEGAPQLGMGGVVSNNGTHPVRLLISHNQMGTIIGRQGLKIKYI--QDASGV 162
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
R+V + L P S+E IV+++G+ E + A
Sbjct: 163 RMVAQKEML----PQSTERIVEVQGTPEGIEKA 191
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 284 TQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKA----PHDETGERMFTIMGSAAA 339
Query: 301 AKRALYEVSTLLHQNPRKDK 320
++ALY LL++N +K
Sbjct: 340 NEKALY----LLYENLEAEK 355
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +PS VGCI+G+GG I+E+RR + A I + A PH + E + I GS+
Sbjct: 284 TQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKA------PHDETGERMFTIMGSA 337
>gi|170580792|ref|XP_001895410.1| KH domain containing protein [Brugia malayi]
gi|158597654|gb|EDP35742.1| KH domain containing protein [Brugia malayi]
Length = 439
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 49/202 (24%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
++L PS +G +IGK G +++L+ E+ ++ ++ + PG+ ER+ ++ KIA
Sbjct: 37 KVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKG---KIA-- 91
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE-----------DLFGGMASDDDNE 236
++LKV D I+E+ D+F + NE
Sbjct: 92 ------------------------SVLKVSDVILEKIREKVDNNTPSDIFDHKGMERKNE 127
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
+L+VPN G ++GK G I+ +R +TGANI+V P ++ + ++ I+
Sbjct: 128 -----MKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAA 182
Query: 297 KPN-VAKRALYEVSTLLHQNPR 317
+ + V AL V + +P+
Sbjct: 183 EQDEVLMDALQRVLEKVAADPQ 204
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 28/159 (17%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERVIRASAFEGLWNP 456
+K+L + +G +IGKGG ++ L+ E+G + + ++ ++ER+ +G
Sbjct: 36 VKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERIC---LVKGKIAS 92
Query: 457 RSQTIDAILQ-----LQNKTSE--FSEKGTI---TTRLLVPSSKVGCILGQGGHVINEMR 506
+ D IL+ + N T F KG +L+VP++ G ++G+ G I E+R
Sbjct: 93 VLKVSDVILEKIREKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIR 152
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLIS 545
+T A+I+V P GS E V S E +I+
Sbjct: 153 EQTGANIQVY--------PKAGSQEAKV----SQERIIT 179
>gi|301758860|ref|XP_002915252.1| PREDICTED: far upstream element-binding protein 3-like [Ailuropoda
melanoleuca]
Length = 572
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 134/330 (40%), Gaps = 86/330 (26%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKIA 185
T+ IL P+ K+G VIGK G +K L+E T K+ + +P ++ + I P K+
Sbjct: 163 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 222
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL--FGGMASDDDNENSTITAR 243
+ A++ +L++ I E+D F G+ D +
Sbjct: 223 Q----------------------AREMVLEI---IREKDQADFRGVRGDFGARVGGGSIE 257
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P+ +
Sbjct: 258 VSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMGPPDRCQH 312
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
A + ++ L+ +D +GG +A G W
Sbjct: 313 AAHVINELILTAQERD--------GFGG-------LAVARGRGRGRGDW----------- 346
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
S+ + PG + E++ A K G VIGKGG N+K +
Sbjct: 347 ------------------SVGA--PGGVQEIT------YTVPADKCGLVIGKGGENIKSI 380
Query: 424 QQETGASIHVEDAPTDSDERVIRASAFEGL 453
Q++GA + ++ P + + +R G+
Sbjct: 381 NQQSGAHVELQRNPPPNTDPNLRIFTIRGI 410
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 182/479 (37%), Gaps = 140/479 (29%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTP------------ 131
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR F +D + NSTI +L+P + VG
Sbjct: 132 -------ESIE---QAKRLLGQIVDRCRNGPGF----HNDIDGNSTIQ-EILIPASKVGL 176
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G P ++A V ++
Sbjct: 177 VIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIR 233
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G GD
Sbjct: 234 EKDQAD-----------------------------------------------FRGVRGD 246
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
+R+G GSI P F++ I VIG+ G +K++Q + G I
Sbjct: 247 FGARVGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 289
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF------------------- 474
+ S ER + + I+ ++ + F
Sbjct: 290 KPDDGISPERAAQVMGPPDRCQHAAHVINELILTAQERDGFGGLAVARGRGRGRGDWSVG 349
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSE--- 531
+ G VP+ K G ++G+GG I + +++ GA V+LQ P +++
Sbjct: 350 APGGVQEITYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPNTDPNL 402
Query: 532 CIVDIRG------SSEHLI------SAHGTYQSFMTSGQSMKVQP--SSYQNINPQQSS 576
I IRG + HLI ++ G +F GQS QP + +QN P +SS
Sbjct: 403 RIFTIRGIPQQIEVARHLIDEKVGGTSLGAPGAF---GQSPFSQPPAAPHQNTFPPRSS 458
Score = 45.8 bits (107), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q + G N G + A + + +G +IG+GG + ++Q
Sbjct: 48 PSVYGYGVQKRPLDDGVGNQL--GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQA 105
Query: 426 ETGASIHVEDAPTDSDER--VIRAS--AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
E+G I + + ER V+ + + E Q +D ++ TI
Sbjct: 106 ESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTI- 164
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRT 509
+L+P+SKVG ++G+GG I +++ RT
Sbjct: 165 QEILIPASKVGLVIGKGGETIKQLQERT 192
>gi|402594254|gb|EJW88180.1| hypothetical protein WUBG_00913 [Wuchereria bancrofti]
Length = 407
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 90/191 (47%), Gaps = 27/191 (14%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
++L PS +G +IGK G +++L+ E+ ++ ++ + PG+ ER+ ++ + K
Sbjct: 5 KVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKGKIASVLKV 64
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
D E +E ++ + + D+F + NE +L+VP
Sbjct: 65 ----SDVILEKIREKVDNNTPS--------------DIFDHKGMERKNE-----MKLVVP 101
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN-VAKRALY 306
N G ++GK G I+ +R +TGANI+V P ++ + ++ I+ + + V AL
Sbjct: 102 NTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAAEQDEVLMDALQ 161
Query: 307 EVSTLLHQNPR 317
V + +P+
Sbjct: 162 RVLEKVAADPQ 172
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 28/159 (17%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERVIRASAFEGLWNP 456
+K+L + +G +IGKGG ++ L+ E+G + + ++ ++ER+ +G
Sbjct: 4 VKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERI---CLVKGKIAS 60
Query: 457 RSQTIDAILQ-----LQNKTSE--FSEKGTI---TTRLLVPSSKVGCILGQGGHVINEMR 506
+ D IL+ + N T F KG +L+VP++ G ++G+ G I E+R
Sbjct: 61 VLKVSDVILEKIREKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIR 120
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLIS 545
+T A+I+V P GS E V S E +I+
Sbjct: 121 EQTGANIQVY--------PKAGSQEAKV----SQERIIT 147
>gi|213512410|ref|NP_001133499.1| Far upstream element-binding protein 3 [Salmo salar]
gi|209154246|gb|ACI33355.1| Far upstream element-binding protein 3 [Salmo salar]
Length = 557
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 68/323 (21%), Positives = 129/323 (39%), Gaps = 85/323 (26%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKIA 185
+ IL P+ K+G VIGK G+ +K L+E T K+ + +P ++ + I P K+
Sbjct: 167 AIQEILIPASKVGLVIGKGGDTIKQLQERTGVKMMMIQDGPMPTGADKPLRITGDPYKVQ 226
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
+ A++ ++++ R ++ F D + + +
Sbjct: 227 Q----------------------ARELVVEII-RDKDQGDFRASRGDFGSRLGGSSLDVA 263
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP VG ++G+ G++I+++++++G I+ P D + P D + Q+ G+ + + A+
Sbjct: 264 VPRFAVGIVIGRNGEMIKKIQNDSGVRIQFKPDDGISP-----DRIAQVMGQSDRCQHAV 318
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST 365
+ ++ L+ +D F SP P W
Sbjct: 319 HLINELVQTAQERD-------------GFGSPVGPRGRGRG--RGDW------------- 350
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
N PG + EV+ A K G VIGKGG +K + Q
Sbjct: 351 ------------------NMGAPGGLQEVTYSI------PADKCGLVIGKGGETIKNINQ 386
Query: 426 ETGASIHVEDAP---TDSDERVI 445
++GA + ++ P TD + R+
Sbjct: 387 QSGAHVELQRNPPPNTDPNVRIF 409
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 160/432 (37%), Gaps = 123/432 (28%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G +R + SP I +
Sbjct: 88 VPDKMVGFIIGRGGEQITRIQLESGCKIQIAADSGGMMDRACTLTGSPENIEQ------- 140
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
A+ L ++ DR F + + NS I +L+P + VG
Sbjct: 141 ---------------AKRLLSQIVDRCRNGPGF----HSEMDSNSAIQ-EILIPASKVGL 180
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK GD I++L+ TG + ++ +P A D+ ++I+G P ++A V ++
Sbjct: 181 VIGKGGDTIKQLQERTGVKMMMIQDGPMPTGA---DKPLRITGDPYKVQQARELVVEII- 236
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+DK F R S GD
Sbjct: 237 ----RDKDQGDF-----------------------------RASR-------------GD 250
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SR+G S++ P F++ I VIG+ G +K++Q ++G I
Sbjct: 251 FGSRLGGSSLDVAVP--------RFAVGI---------VIGRNGEMIKKIQNDSGVRIQF 293
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSE----------------- 476
+ S +R+ + I+ ++Q + F
Sbjct: 294 KPDDGISPDRIAQVMGQSDRCQHAVHLINELVQTAQERDGFGSPVGPRGRGRGRGDWNMG 353
Query: 477 --KGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSE--- 531
G +P+ K G ++G+GG I + +++ GA V+LQ P +++
Sbjct: 354 APGGLQEVTYSIPADKCGLVIGKGGETIKNINQQS-------GAHVELQRNPPPNTDPNV 406
Query: 532 CIVDIRGSSEHL 543
I IRG+ + +
Sbjct: 407 RIFSIRGTHQQM 418
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 13/158 (8%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q M G N G M A + +G +IG+GG + ++Q
Sbjct: 52 PSLYGYGGQKRSMDDGVGNQM--GGMVHQRAIMTEDFKVPDKMVGFIIGRGGEQITRIQL 109
Query: 426 ETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKT-------SEFSEKG 478
E+G I + DS + RA G Q + Q+ ++ SE
Sbjct: 110 ESGCKIQI---AADSGGMMDRACTLTGSPENIEQAKRLLSQIVDRCRNGPGFHSEMDSNS 166
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
I +L+P+SKVG ++G+GG I +++ RT + ++
Sbjct: 167 AI-QEILIPASKVGLVIGKGGDTIKQLQERTGVKMMMI 203
Score = 47.4 bits (111), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 92/191 (48%), Gaps = 25/191 (13%)
Query: 373 DQPSRMGSGSINSC--PPGQMGEVSAEFSMK-ILCSAGKIGGVIGKGGFNVKQLQQETGA 429
+Q R+ S ++ C PG E+ + +++ IL A K+G VIGKGG +KQLQ+ TG
Sbjct: 139 EQAKRLLSQIVDRCRNGPGFHSEMDSNSAIQEILIPASKVGLVIGKGGDTIKQLQERTGV 198
Query: 430 S-IHVEDAPTDSD-ERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRL--- 484
+ ++D P + ++ +R + + + I++ +++ + +G +RL
Sbjct: 199 KMMMIQDGPMPTGADKPLRITGDPYKVQQARELVVEIIRDKDQGDFRASRGDFGSRLGGS 258
Query: 485 ----LVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
VP VG ++G+ G EM ++ Q D G R++ + S + I + G S
Sbjct: 259 SLDVAVPRFAVGIVIGRNG----EMIKKIQND---SGVRIQFKPDDGISPDRIAQVMGQS 311
Query: 541 E------HLIS 545
+ HLI+
Sbjct: 312 DRCQHAVHLIN 322
>gi|261197389|ref|XP_002625097.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239595727|gb|EEQ78308.1| KH domain RNA-binding protein [Ajellomyces dermatitidis SLH14081]
gi|239606718|gb|EEQ83705.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ER-3]
gi|327358051|gb|EGE86908.1| KH domain RNA-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 363
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/313 (22%), Positives = 135/313 (43%), Gaps = 40/313 (12%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ + G +RV+ + AK
Sbjct: 47 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKA--- 103
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ LL+ ++ GG+ S+ T RLL+ +N
Sbjct: 104 ---------------YAIVAKGLLEGAPQL----GMGGVVSN----TGTHPVRLLISHNQ 140
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 141 MGTIIGRQGLKIKYIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAVWEIGK 196
Query: 311 LLHQNPRKDKPPSSFPQAY----GGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTP 366
L + ++ + A GG ++ G S+ N + +G +
Sbjct: 197 CLIDDWQRGTGTVLYNPAVRASVGGGPMNNSLGSGTAAGGYGGRSY---NRTGNGADFSD 253
Query: 367 WMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQE 426
GGY R S + N P + + I + +G +IG+GG + ++++
Sbjct: 254 QTGGY---NRRSNSDAANRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEIRRS 310
Query: 427 TGASIHVEDAPTD 439
+GA I + AP D
Sbjct: 311 SGARISIAKAPHD 323
Score = 43.9 bits (102), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNP 456
+++ + S+ + G +IGK G NV L+ ETG V +RV+ + +G
Sbjct: 44 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKA 103
Query: 457 RSQTIDAILQLQ---NKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ +L+ S GT RLL+ +++G I+G+ G I + + + +
Sbjct: 104 YAIVAKGLLEGAPQLGMGGVVSNTGTHPVRLLISHNQMGTIIGRQGLKIKYI--QDASGV 161
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
R+V + L P S+E IV+++G+ E + A
Sbjct: 162 RMVAQKEML----PQSTERIVEVQGTPEGIEKA 190
Score = 43.1 bits (100), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 283 TQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKA----PHDETGERMFTIMGSAAA 338
Query: 301 AKRALYEVSTLLHQNPRKDK 320
++ALY LL++N +K
Sbjct: 339 NEKALY----LLYENLEAEK 354
Score = 41.2 bits (95), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 6/60 (10%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +PS VGCI+G+GG I+E+RR + A I + A PH + E + I GS+
Sbjct: 283 TQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKA------PHDETGERMFTIMGSA 336
>gi|281349495|gb|EFB25079.1| hypothetical protein PANDA_003250 [Ailuropoda melanoleuca]
Length = 571
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 134/330 (40%), Gaps = 86/330 (26%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKIA 185
T+ IL P+ K+G VIGK G +K L+E T K+ + +P ++ + I P K+
Sbjct: 163 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 222
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL--FGGMASDDDNENSTITAR 243
+ A++ +L++ I E+D F G+ D +
Sbjct: 223 Q----------------------AREMVLEI---IREKDQADFRGVRGDFGARVGGGSIE 257
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P+ +
Sbjct: 258 VSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMGPPDRCQH 312
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
A + ++ L+ +D +GG +A G W
Sbjct: 313 AAHVINELILTAQERD--------GFGG-------LAVARGRGRGRGDW----------- 346
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
S+ + PG + E++ A K G VIGKGG N+K +
Sbjct: 347 ------------------SVGA--PGGVQEIT------YTVPADKCGLVIGKGGENIKSI 380
Query: 424 QQETGASIHVEDAPTDSDERVIRASAFEGL 453
Q++GA + ++ P + + +R G+
Sbjct: 381 NQQSGAHVELQRNPPPNTDPNLRIFTIRGI 410
Score = 59.7 bits (143), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 103/477 (21%), Positives = 181/477 (37%), Gaps = 135/477 (28%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTP------------ 131
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR F +D + NSTI +L+P + VG
Sbjct: 132 -------ESIE---QAKRLLGQIVDRCRNGPGF----HNDIDGNSTIQ-EILIPASKVGL 176
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G P ++A V ++
Sbjct: 177 VIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIR 233
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G GD
Sbjct: 234 EKDQAD-----------------------------------------------FRGVRGD 246
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
+R+G GSI P F++ I VIG+ G +K++Q + G I
Sbjct: 247 FGARVGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 289
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF------------------- 474
+ S ER + + I+ ++ + F
Sbjct: 290 KPDDGISPERAAQVMGPPDRCQHAAHVINELILTAQERDGFGGLAVARGRGRGRGDWSVG 349
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSE--- 531
+ G VP+ K G ++G+GG I + +++ GA V+LQ P +++
Sbjct: 350 APGGVQEITYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPNTDPNL 402
Query: 532 CIVDIRG------SSEHLISAHGTYQSFMTS----GQSMKVQP--SSYQNINPQQSS 576
I IRG + HLI ++ + + GQS QP + +QN P +SS
Sbjct: 403 RIFTIRGIPQQIEVARHLIDEKVGVRTSLGAPGAFGQSPFSQPPAAPHQNTFPPRSS 459
Score = 45.8 bits (107), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q + G N G + A + + +G +IG+GG + ++Q
Sbjct: 48 PSVYGYGVQKRPLDDGVGNQL--GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQA 105
Query: 426 ETGASIHVEDAPTDSDER--VIRAS--AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
E+G I + + ER V+ + + E Q +D ++ TI
Sbjct: 106 ESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTI- 164
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRT 509
+L+P+SKVG ++G+GG I +++ RT
Sbjct: 165 QEILIPASKVGLVIGKGGETIKQLQERT 192
>gi|126723252|ref|NP_001075594.1| heterogeneous nuclear ribonucleoprotein K [Oryctolagus cuniculus]
gi|12230546|sp|O19049.1|HNRPK_RABIT RecName: Full=Heterogeneous nuclear ribonucleoprotein K;
Short=hnRNP K
gi|2644968|emb|CAA05815.1| hnRNP-K protein [Oryctolagus cuniculus]
Length = 463
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 117 EQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
EQ+F S+ D + RIL S+ G VIGK G +K+LR + A ++V D+ ER+
Sbjct: 30 EQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERI 87
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESME---PHCAAQDALLKVHDRIIEEDLFGGMAS 231
+ I + I + K T +E ++ P +Q L + F G S
Sbjct: 88 LSISADIETIGEILKK----IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKG--S 141
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
D D E RLL+ ++ G ++G +G I+ LR T I++ C +TD +
Sbjct: 142 DFDCE-----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRV 192
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAY 329
V I GKP+ + + L+ ++P K + P Y
Sbjct: 193 VLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFY 230
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA---------- 449
++IL + G VIGKGG N+K L+ + AS+ V D + ER++ SA
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPD--SSGPERILSISADIETIGEILK 102
Query: 450 ------FEGLWNP----------RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGC 493
EGL P S ++ + K S+F RLL+ S G
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKGSDFD----CELRLLIHQSLAGG 158
Query: 494 ILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I+G G I E+R TQ I++ Q+ P S++ +V I G + ++
Sbjct: 159 IIGVKGAKIKELRENTQTTIKL------FQECCPHSTDRVVLIGGKPDRVV 203
Score = 42.7 bits (99), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
++S + S+G+ ++ P G +IGK G +K +R E+ A I + + + G
Sbjct: 370 DYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 170 SEERVIIIYSSPTKIAKTQ 188
SE+R+I I + +I Q
Sbjct: 430 SEDRIITITGTQDQIQNAQ 448
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GG S D IT ++ +P ++ G ++GK G I+++R E+GA+I++ P
Sbjct: 375 GGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEG 429
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+ D ++ I+G + + A Y + + Q
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVKQ 457
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
ITT++ +P G I+G+GG I ++R + GA +K+ +P GS + I+ I G+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHES-------GASIKIDEPLEGSEDRIITITGT 440
Query: 540 SEHLISAHGTYQS 552
+ + +A Q+
Sbjct: 441 QDQIQNAQYLLQN 453
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGKGG +KQ++ E+GASI +++ S++R+I + + Q +A LQN
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQN 453
Query: 470 KTSEFSEK 477
++S K
Sbjct: 454 SVKQYSGK 461
>gi|358056167|dbj|GAA97907.1| hypothetical protein E5Q_04587 [Mixia osmundae IAM 14324]
Length = 531
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 96/206 (46%), Gaps = 42/206 (20%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSS 180
G ++ + R L SR+ G VIG+ G V +RE+ Q K V+ +PG ERV+ +
Sbjct: 136 GQAEAPTLIMRALVSSREAGIVIGRQGKNVADIREKAQVKAGVSKLVPGVSERVLTVTGQ 195
Query: 181 PTKIAKT-----QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEED---LFGGMASD 232
+ +A+ Q D+S+ I D + G++
Sbjct: 196 ISGVARAFGLICQTIMDNSSG------------------------IPNDSPSTYTGLS-- 229
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
ST+T RLL+ + +G ++GK G I+ ++ +G R+ + L P +T+ +V
Sbjct: 230 ----GSTLTLRLLISSAQMGGVIGKAGTKIKSIQQTSGT--RMAASKELLP--QSTERLV 281
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRK 318
+ISG+P ++A+ E++ L ++ K
Sbjct: 282 EISGRPEQVEKAVAEIAKALVEDEAK 307
Score = 46.2 bits (108), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 89/206 (43%), Gaps = 18/206 (8%)
Query: 385 SCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 444
+ PPGQ + M+ L S+ + G VIG+ G NV ++++ V ERV
Sbjct: 132 ASPPGQA--EAPTLIMRALVSSREAGIVIGRQGKNVADIREKAQVKAGVSKLVPGVSERV 189
Query: 445 IR--------ASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILG 496
+ A AF + I T T+T RLL+ S+++G ++G
Sbjct: 190 LTVTGQISGVARAFGLICQTIMDNSSGIPNDSPSTYTGLSGSTLTLRLLISSAQMGGVIG 249
Query: 497 QGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTS 556
+ G I +++ + R+ ++ L P S+E +V+I G E + A +
Sbjct: 250 KAGTKIKSIQQ--TSGTRMAASKELL----PQSTERLVEISGRPEQVEKAVAEIAKALVE 303
Query: 557 GQSMKVQPSSYQ--NINPQQSSCQTM 580
++ V ++ N+NP+ S Q++
Sbjct: 304 DEAKAVGTIAFHPANLNPELSGLQSI 329
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 380 SGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV-EDAPT 438
SG N P G + ++++L S+ ++GGVIGK G +K +QQ +G + ++
Sbjct: 215 SGIPNDSPSTYTGLSGSTLTLRLLISSAQMGGVIGKAGTKIKSIQQTSGTRMAASKELLP 274
Query: 439 DSDERVIRAS 448
S ER++ S
Sbjct: 275 QSTERLVEIS 284
>gi|356576359|ref|XP_003556300.1| PREDICTED: RNA-binding protein Nova-1-like [Glycine max]
Length = 337
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/328 (23%), Positives = 137/328 (41%), Gaps = 77/328 (23%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIY 178
+S+ T R L + G VIGK G+ + + ++ A+I ++ + PG+ +R+I++
Sbjct: 30 DSEEKPTYIRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTDRIIMVS 89
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+ +I Q A+ + +++ E + S+DDN+
Sbjct: 90 GAINEI-------------------------QRAVELILSKLLSE-----LHSEDDNDAE 119
Query: 239 TIT-ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGK 297
T RL+VPN G ++GK G I+ ++ A I++ P D D +V ++G
Sbjct: 120 PKTKVRLVVPNGSCGGIIGKGGVTIRSFIEDSQAGIKISPQDN--NYYGQNDRLVMLTGT 177
Query: 298 PNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNS 357
+ RA+ + + L ++P + +S P +Y G F S
Sbjct: 178 FDEQMRAIELIVSKLAEDPHYAQSMNS-PFSYPGVYF----------------------S 214
Query: 358 SLHGMPSTPWMGGYGDQPSRM--GSGSINSCPPGQMG--------EVSAEFSMKILCSAG 407
G+P T + PS ++N P G G E S +M + +
Sbjct: 215 GYQGVPYTYVL------PSVAPPAYNAVNYRPNGTAGGKLQNSKEERSNSLTMGV--ADE 266
Query: 408 KIGGVIGKGGFNVKQLQQETGASIHVED 435
IG V+G+GG N+ ++ Q +GA I + D
Sbjct: 267 HIGLVVGRGGRNIMEISQVSGARIKISD 294
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 61/125 (48%), Gaps = 14/125 (11%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV----EDAPTDSDERVIRASAFEGLWN 455
++ L S G VIGKGG + Q ++GA I + E P +D R+I S G N
Sbjct: 38 IRFLVSNSAAGSVIGKGGSTITDFQSQSGARIQLSRNHEFFPGTTD-RIIMVS---GAIN 93
Query: 456 PRSQTIDAIL-----QLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
+ ++ IL +L ++ +E T RL+VP+ G I+G+GG I +Q
Sbjct: 94 EIQRAVELILSKLLSELHSEDDNDAEPKT-KVRLVVPNGSCGGIIGKGGVTIRSFIEDSQ 152
Query: 511 ADIRV 515
A I++
Sbjct: 153 AGIKI 157
>gi|9931476|gb|AAG02185.1| RNA binding protein MCG10 [Homo sapiens]
gi|119585575|gb|EAW65171.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
gi|119585578|gb|EAW65174.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
gi|119585579|gb|EAW65175.1| poly(rC) binding protein 4, isoform CRA_d [Homo sapiens]
Length = 369
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 61 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 120
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGGMASDD-- 233
P I + E+ + P + LL + + +G + +
Sbjct: 121 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVT 180
Query: 234 ---------------------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 181 KLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 240
Query: 273 IRV 275
I++
Sbjct: 241 IKI 243
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 53/98 (54%), Gaps = 4/98 (4%)
Query: 221 IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
++EDL A+ + +T RL++P + G L+GK G I+ +R TGA ++V D
Sbjct: 49 LDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA-GDL 107
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRK 318
LP +T+ V +SG P+ + ++ ++ ++P K
Sbjct: 108 LP---NSTERAVTVSGVPDAIILCVRQICAVILESPPK 142
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+T RL++P+S+ G ++G+ G I E+R T A ++V G D P S+E V + G
Sbjct: 68 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAG------DLLPNSTERAVTVSGV 121
Query: 540 SEHLI 544
+ +I
Sbjct: 122 PDAII 126
>gi|308460519|ref|XP_003092563.1| CRE-PES-4 protein [Caenorhabditis remanei]
gi|308253083|gb|EFO97035.1| CRE-PES-4 protein [Caenorhabditis remanei]
Length = 436
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G+ +K +REE+ AKI ++D GS ER++ I + I K N
Sbjct: 76 RLLMQGKEVGSIIGKKGDQIKKIREESGAKINISD---GSCPERIVTITGTLGVIGKAFN 132
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
+ EED+ + + IT R++VP
Sbjct: 133 MVCNK--------------------------FEEDM---LLLPNSVPKPPITMRVIVPAT 163
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R TGA+I+V ++ LP +T+ V +SG + + +V
Sbjct: 164 QCGSLIGKGGSKIKDIREATGASIQV-ASEMLP---HSTERAVTLSGTADAINLCMTQVC 219
Query: 310 TLLHQNPRK 318
+L + P K
Sbjct: 220 QILLEAPPK 228
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 81/154 (52%), Gaps = 17/154 (11%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S ++++L ++G +IGK G +K++++E+GA I++ D ER++ + G+
Sbjct: 70 SLVLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCPERIVTITGTLGVI 127
Query: 455 NPRSQTI-----DAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
+ + +L L N K IT R++VP+++ G ++G+GG I ++R T
Sbjct: 128 GKAFNMVCNKFEEDMLLLPNSV----PKPPITMRVIVPATQCGSLIGKGGSKIKDIREAT 183
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
A I+V + PH S+E V + G+++ +
Sbjct: 184 GASIQVASEML----PH--STERAVTLSGTADAI 211
Score = 40.4 bits (93), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+T RLL+ VG ++GK+GD I+++R E+GA I + +D P + +V I+G
Sbjct: 73 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINI--SDGSCP-----ERIVTITGTLG 125
Query: 300 VAKRALYEV 308
V +A V
Sbjct: 126 VIGKAFNMV 134
>gi|121710626|ref|XP_001272929.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
gi|119401079|gb|EAW11503.1| KH domain RNA-binding protein [Aspergillus clavatus NRRL 1]
Length = 362
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/319 (22%), Positives = 135/319 (42%), Gaps = 53/319 (16%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ +PG +RV+ + A+
Sbjct: 47 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVHDRVLTVTGPLQGTARA--- 103
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ LL+ ++ GG+ N N T RLL+ +N
Sbjct: 104 ---------------YALVAKGLLEGAPQM----GMGGIV----NNNGTHPVRLLISHNQ 140
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 141 MGTIIGRQGLKIKHIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAVWEIGK 196
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPW--M 368
L + ++ G PA A + SS ++ +G S P+
Sbjct: 197 CLIDDWQR-----------GTGTILYNPAVRASVGT--GSSINTNTTASNGYNSRPYNRT 243
Query: 369 GGYGDQPSRMGSGSINSCPPGQ-------MGEVSAEF-SMKILCSAGKIGGVIGKGGFNV 420
G D +G P + E E + I A +G +IG+GG +
Sbjct: 244 GNGADFSDGQSAGYSRRSNPDTSNRGYPLVTEDGEEIQTQNISIPADMVGCIIGRGGSKI 303
Query: 421 KQLQQETGASIHVEDAPTD 439
++++ +GA I + AP D
Sbjct: 304 TEIRRSSGARISIAKAPHD 322
Score = 44.3 bits (103), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 78/170 (45%), Gaps = 10/170 (5%)
Query: 381 GSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDS 440
G ++ P + + +++ + S+ + G +IGK G NV L+ ETG V
Sbjct: 27 GDMDITPKTEEEYAQSMLTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGV 86
Query: 441 DERVIRASA-FEGLWNPRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILG 496
+RV+ + +G + +L+ + GT RLL+ +++G I+G
Sbjct: 87 HDRVLTVTGPLQGTARAYALVAKGLLEGAPQMGMGGIVNNNGTHPVRLLISHNQMGTIIG 146
Query: 497 QGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
+ G I + + + +R+V + L P S+E IV+++G+ E + A
Sbjct: 147 RQGLKIKHI--QDASGVRMVAQKEML----PQSTERIVEVQGTPEGIEKA 190
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P +MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 282 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKA----PHDETGERMFTIMGSAQA 337
Query: 301 AKRALYEVSTLLHQNPRKDKP-PSSFPQ 327
++ALY LL++N +K S PQ
Sbjct: 338 NEKALY----LLYENLEAEKTRRSQLPQ 361
Score = 40.4 bits (93), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +P+ VGCI+G+GG I E+RR + A I + A PH + E + I GS+
Sbjct: 282 TQNISIPADMVGCIIGRGGSKITEIRRSSGARISIAKA------PHDETGERMFTIMGSA 335
Query: 541 E 541
+
Sbjct: 336 Q 336
>gi|355733298|gb|AES10985.1| poly binding protein 2 [Mustela putorius furo]
Length = 148
Score = 63.5 bits (153), Expect = 4e-07, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 77/132 (58%), Gaps = 10/132 (7%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 20 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 77
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 78 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 135
Query: 506 RRRTQADIRVVG 517
R T A ++V G
Sbjct: 136 RESTGAQVQVAG 147
Score = 58.5 bits (140), Expect = 1e-05, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 34/148 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 29 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 77
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 78 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 117
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRV 275
+ G L+GK G I+ +R TGA ++V
Sbjct: 118 ASQCGSLIGKGGCKIKEIRESTGAQVQV 145
Score = 39.3 bits (90), Expect = 6.3, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 23 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 61
>gi|258566349|ref|XP_002583919.1| hypothetical protein UREG_06886 [Uncinocarpus reesii 1704]
gi|237907620|gb|EEP82021.1| hypothetical protein UREG_06886 [Uncinocarpus reesii 1704]
Length = 366
Score = 63.5 bits (153), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 74/319 (23%), Positives = 139/319 (43%), Gaps = 53/319 (16%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ + G +RV+ + AK
Sbjct: 51 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKA--- 107
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ +LL+ ++ GM N N T RLL+ +N
Sbjct: 108 ---------------YGMVAKSLLEGAPQV-------GMGGIIQN-NGTHPVRLLISHNQ 144
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 145 MGTIIGRQGLKIKYIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAVWEIGK 200
Query: 311 LLHQNPRKDKP-----PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPST 365
L + ++ P+ GGQ S P N ++ R+ + G +
Sbjct: 201 CLIDDWQRGTGTVLYNPAVRANVGGGQMNSSFLGP--------NPNYGGRSYNRTGNGAD 252
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQ----MGEVSAEF-SMKILCSAGKIGGVIGKGGFNV 420
+ DQPS + NS P + + E E + I + +G +IG+GG +
Sbjct: 253 -----FSDQPSSGYNRRHNSDAPNRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKI 307
Query: 421 KQLQQETGASIHVEDAPTD 439
++++ +GA I + A D
Sbjct: 308 SEIRRSSGARISIAKASHD 326
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 72/153 (47%), Gaps = 10/153 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNP 456
+++ + S+ + G +IGK G NV L+ ETG V +RV+ + +G
Sbjct: 48 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTAKA 107
Query: 457 RSQTIDAILQLQNKTSE---FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
++L+ + GT RLL+ +++G I+G+ G I + + + +
Sbjct: 108 YGMVAKSLLEGAPQVGMGGIIQNNGTHPVRLLISHNQMGTIIGRQGLKIKYI--QDASGV 165
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
R+V + L P S+E IV+++G+ E + A
Sbjct: 166 RMVAQKEML----PQSTERIVEVQGTPEGIEKA 194
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R +GA I + A + M I G
Sbjct: 286 TQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKASH----DETGERMFTIMGSAQA 341
Query: 301 AKRALYEVSTLLHQNPRKDK 320
++ALY LL++N +K
Sbjct: 342 NEKALY----LLYENLEAEK 357
Score = 38.9 bits (89), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +PS VGCI+G+GG I+E+RR + A I + A H + E + I GS+
Sbjct: 286 TQNISIPSDMVGCIIGRGGSKISEIRRSSGARISIAKA------SHDETGERMFTIMGSA 339
Query: 541 E 541
+
Sbjct: 340 Q 340
>gi|428183593|gb|EKX52450.1| hypothetical protein GUITHDRAFT_101621 [Guillardia theta CCMP2712]
Length = 358
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 76/320 (23%), Positives = 141/320 (44%), Gaps = 56/320 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAK 186
+IL ++ G VIGKAG + S+++ + AK+ V+ +T PG+ +R+++I +
Sbjct: 38 LKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISGKVETVL- 96
Query: 187 TQNKDDDSAAETKKESM--EPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
SAA+ M +P+ R+ D+ N+ +T +
Sbjct: 97 -------SAAKMVISEMYRDPNSG----------RV------------PDDVNAVMTVSI 127
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
++P G ++GK G+ I LR ET A I++ D++ +N + +V I G A+ A
Sbjct: 128 VIPAAACGLVIGKGGEKINSLREETQAKIQLQAKDKVAIPGLN-ERIVTIQGTLPQAQTA 186
Query: 305 LYEVSTLLHQ--NPRKDKPPSSFPQA--YG---GQNFHSPPAPMADMHPL-GNSSWP-AR 355
+ ++ L+H+ N R + +++ + G GQ + PM + G P
Sbjct: 187 VEKIVHLIHEDGNIRYENLGTNYGMSGMMGKGLGQGYGMGMMPMQGAAAMYGGMQMPMGM 246
Query: 356 NSSLHGMPSTPWMGGY--GDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVI 413
+ + GM P M G G + M + + +K+ + +G ++
Sbjct: 247 DMASQGMGMAPGMPGVVPGQEYWGMSQHGLGT---------DMHTVLKLSITDDAVGPLL 297
Query: 414 GKGGFNVKQLQQETGASIHV 433
GKGG N+K+ +GA+I V
Sbjct: 298 GKGGCNLKEYISVSGANIKV 317
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 8/148 (5%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV----EDAPTDSDERVIRASAFEG 452
+ ++KIL G VIGK G + ++ +GA + V E P +D V+ + E
Sbjct: 35 QMALKILIGNKSAGSVIGKAGATINSIKDTSGAKVKVSSNSETFPGTADRIVLISGKVET 94
Query: 453 LWNPRSQTIDAILQLQNKTSEFSE-KGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+ + I + + N + +T +++P++ G ++G+GG IN +R TQA
Sbjct: 95 VLSAAKMVISEMYRDPNSGRVPDDVNAVMTVSIVIPAAACGLVIGKGGEKINSLREETQA 154
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGS 539
I++ + K + PG +E IV I+G+
Sbjct: 155 KIQL---QAKDKVAIPGLNERIVTIQGT 179
Score = 41.6 bits (96), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 55/117 (47%), Gaps = 14/117 (11%)
Query: 217 HDRIIEEDLFG-------GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSET 269
HD E+D+ G++S D+ + + ++L+ N G ++GK G I ++ +
Sbjct: 9 HDEAEEQDVLAKRQVTGDGISSGDETQ---MALKILIGNKSAGSVIGKAGATINSIKDTS 65
Query: 270 GANIRVLP-ADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSF 325
GA ++V ++ P A D +V ISGK A V + ++++P + P
Sbjct: 66 GAKVKVSSNSETFPGTA---DRIVLISGKVETVLSAAKMVISEMYRDPNSGRVPDDV 119
>gi|312079928|ref|XP_003142383.1| hypothetical protein LOAG_06799 [Loa loa]
Length = 440
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 93/202 (46%), Gaps = 49/202 (24%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
++L PS +G +IGK G +++L+ E+ ++ ++ + PG+ ER+ ++ KIA
Sbjct: 37 KVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERICLVKG---KIA-- 91
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE-----------DLFGGMASDDDNE 236
++LKV D I+E+ D+F + NE
Sbjct: 92 ------------------------SVLKVSDVILEKIREKVDNNTPSDIFDHKGMERKNE 127
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
+L+VPN G ++GK G I+ +R +TGANI+V P ++ + ++ I+
Sbjct: 128 -----MKLVVPNTSAGMVIGKSGARIKEIREQTGANIQVYPKAGSQEAKVSQERIITIAA 182
Query: 297 KPN-VAKRALYEVSTLLHQNPR 317
+ + V AL V + +P+
Sbjct: 183 EQDEVLMDALQRVLEKVAADPQ 204
Score = 47.8 bits (112), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 28/159 (17%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERVIRASAFEGLWNP 456
+K+L + +G +IGKGG ++ L+ E+G + + ++ ++ER+ +G
Sbjct: 36 VKVLIPSAAVGALIGKGGETMRNLKSESGCRLQMSKNQEVYPGTNERI---CLVKGKIAS 92
Query: 457 RSQTIDAILQ-----LQNKTSE--FSEKGTI---TTRLLVPSSKVGCILGQGGHVINEMR 506
+ D IL+ + N T F KG +L+VP++ G ++G+ G I E+R
Sbjct: 93 VLKVSDVILEKIREKVDNNTPSDIFDHKGMERKNEMKLVVPNTSAGMVIGKSGARIKEIR 152
Query: 507 RRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLIS 545
+T A+I+V P GS E V S E +I+
Sbjct: 153 EQTGANIQVY--------PKAGSQEAKV----SQERIIT 179
Score = 39.3 bits (90), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 14/42 (33%), Positives = 30/42 (71%)
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
D E++ + ++L+P+ VG L+GK G+ ++ L+SE+G +++
Sbjct: 28 DTEDNIVQVKVLIPSAAVGALIGKGGETMRNLKSESGCRLQM 69
>gi|268570691|ref|XP_002640810.1| C. briggsae CBR-PES-4 protein [Caenorhabditis briggsae]
Length = 447
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G+ +K +REE+ AKI ++D GS ER++ I + I K N
Sbjct: 77 RLLMQGKEVGSIIGKKGDQIKKIREESGAKINISD---GSCPERIVTITGTLGVIGKAFN 133
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
+ EED+ + + IT R++VP
Sbjct: 134 MVCNK--------------------------FEEDM---LLLPNSVPKPPITMRVIVPAT 164
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R TGA+I+V ++ LP +T+ V +SG + + +V
Sbjct: 165 QCGSLIGKGGSKIKDIREATGASIQV-ASEMLP---HSTERAVTLSGTADAINLCMTQVC 220
Query: 310 TLLHQNPRK 318
+L + RK
Sbjct: 221 QILLEVTRK 229
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 81/154 (52%), Gaps = 17/154 (11%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S ++++L ++G +IGK G +K++++E+GA I++ D ER++ + G+
Sbjct: 71 SLVLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCPERIVTITGTLGVI 128
Query: 455 NPRSQTI-----DAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
+ + +L L N K IT R++VP+++ G ++G+GG I ++R T
Sbjct: 129 GKAFNMVCNKFEEDMLLLPNSV----PKPPITMRVIVPATQCGSLIGKGGSKIKDIREAT 184
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
A I+V + PH S+E V + G+++ +
Sbjct: 185 GASIQVASEML----PH--STERAVTLSGTADAI 212
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+T RLL+ VG ++GK+GD I+++R E+GA I + +D P + +V I+G
Sbjct: 74 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINI--SDGSCP-----ERIVTITGTLG 126
Query: 300 VAKRALYEV 308
V +A V
Sbjct: 127 VIGKAFNMV 135
Score = 40.0 bits (92), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 23/85 (27%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV--EDAPTDSDERVIRASAFEGLWN 455
+M+++ A + G +IGKGG +K +++ TGASI V E P ++ V + + +
Sbjct: 155 ITMRVIVPATQCGSLIGKGGSKIKDIREATGASIQVASEMLPHSTERAVTLSGTADAINL 214
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTI 480
+Q +L++ K K T
Sbjct: 215 CMTQVCQILLEVTRKKLSTENKATF 239
>gi|359320464|ref|XP_849868.3| PREDICTED: far upstream element-binding protein 3 isoform 1 [Canis
lupus familiaris]
Length = 554
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/324 (22%), Positives = 133/324 (41%), Gaps = 89/324 (27%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKIA 185
T+ IL P+ K+G VIGK G +K L+E T K+ + +P ++ + I P K+
Sbjct: 163 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKVQ 222
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL--FGGMASDDDNENSTITAR 243
+ A++ +L++ I E+D F G+ D +
Sbjct: 223 Q----------------------AREMVLEI---IREKDQADFRGVRGDFSARVGGGSIE 257
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P+ +
Sbjct: 258 VSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMGPPDRCQH 312
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
A + ++ L+ +D +GG +A G W
Sbjct: 313 AAHVINELILTAQERD--------GFGGLT-------VARGRGRGRGDW----------- 346
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
S+ + PG + E++ A K G VIGKGG N+K +
Sbjct: 347 ------------------SVGA--PGGVQEIT------YTVPADKCGLVIGKGGDNIKSI 380
Query: 424 QQETGASIHVEDAP---TDSDERV 444
Q++GA + ++ P TD + R+
Sbjct: 381 NQQSGAHVELQRNPPPNTDPNLRI 404
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 105/479 (21%), Positives = 182/479 (37%), Gaps = 140/479 (29%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTP------------ 131
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR F +D + NSTI +L+P + VG
Sbjct: 132 -------ESIE---QAKRLLGQIVDRCRNGPGF----HNDIDGNSTIQ-EILIPASKVGL 176
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G P ++A V ++
Sbjct: 177 VIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIR 233
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G GD
Sbjct: 234 EKDQAD-----------------------------------------------FRGVRGD 246
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
+R+G GSI P F++ I VIG+ G +K++Q + G I
Sbjct: 247 FSARVGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 289
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF------------------- 474
+ S ER + + I+ ++ + F
Sbjct: 290 KPDDGISPERAAQVMGPPDRCQHAAHVINELILTAQERDGFGGLTVARGRGRGRGDWSVG 349
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSE--- 531
+ G VP+ K G ++G+GG I + +++ GA V+LQ P +++
Sbjct: 350 APGGVQEITYTVPADKCGLVIGKGGDNIKSINQQS-------GAHVELQRNPPPNTDPNL 402
Query: 532 CIVDIRG------SSEHLI------SAHGTYQSFMTSGQSMKVQP--SSYQNINPQQSS 576
I IRG + HLI ++ G +F GQS QP + +QN P +SS
Sbjct: 403 RIFTIRGIPQQIEVARHLIDEKVGGTSLGAPGAF---GQSPFSQPPAAPHQNTFPPRSS 458
Score = 45.8 bits (107), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q + G N G + A + + +G +IG+GG + ++Q
Sbjct: 48 PSVYGYGVQKRPLDDGVGNQL--GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQA 105
Query: 426 ETGASIHVEDAPTDSDER--VIRAS--AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
E+G I + + ER V+ + + E Q +D ++ TI
Sbjct: 106 ESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDIDGNSTI- 164
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRT 509
+L+P+SKVG ++G+GG I +++ RT
Sbjct: 165 QEILIPASKVGLVIGKGGETIKQLQERT 192
>gi|345306114|ref|XP_001507404.2| PREDICTED: far upstream element-binding protein 3 [Ornithorhynchus
anatinus]
Length = 590
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 94/432 (21%), Positives = 164/432 (37%), Gaps = 123/432 (28%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 103 VPDKMVGFIIGRGGEQISRIQAESGCKIQIAPDSGGMPERPCVLTGTP------------ 150
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR F +D + NSTI +L+P + VG
Sbjct: 151 -------ESIE---QAKRLLGQIVDRCRNGPGF----HNDVDGNSTIQ-EILIPASKVGL 195
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G+P ++A V ++
Sbjct: 196 VIGKGGETIKQLQERTGVKMIMIQDGPLPTGA---DKPLRITGEPFKVQQAREMVLEIIR 252
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G D
Sbjct: 253 EKDQAD-----------------------------------------------FRGVRSD 265
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SRMG GSI P F++ I VIG+ G +K++Q + G I
Sbjct: 266 FSSRMGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 308
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF------------------- 474
+ S ERV + + I+ ++ + F
Sbjct: 309 KPDDGISPERVAQVMGLPDRCQHAAHIINELILTAQERDGFGSLAVARGRGRGRGDWSVG 368
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ-DPHPGS--SE 531
+ G VP+ K G ++G+GG I + +++ GA V+LQ +P P + S
Sbjct: 369 TPGGMQEITYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPNTDPSV 421
Query: 532 CIVDIRGSSEHL 543
I IRG + +
Sbjct: 422 RIFTIRGVPQQI 433
Score = 62.0 bits (149), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 47/194 (24%), Positives = 92/194 (47%), Gaps = 30/194 (15%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAK-ITVADT-IPGSEERVIIIYSSPTKIA 185
T+ IL P+ K+G VIGK G +K L+E T K I + D +P ++ + I P K+
Sbjct: 182 TIQEILIPASKVGLVIGKGGETIKQLQERTGVKMIMIQDGPLPTGADKPLRITGEPFKVQ 241
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
+ A++ +L++ + D F G+ SD + + +
Sbjct: 242 Q----------------------AREMVLEIIREKDQAD-FRGVRSDFSSRMGGGSIEVS 278
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
VP VG ++G+ G++I++++++ G I+ P D + P + + Q+ G P+ + A
Sbjct: 279 VPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERVAQVMGLPDRCQHAA 333
Query: 306 YEVSTLLHQNPRKD 319
+ ++ L+ +D
Sbjct: 334 HIINELILTAQERD 347
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 82/188 (43%), Gaps = 22/188 (11%)
Query: 329 YGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPP 388
YG + S A + D P N+S P + S++G YG Q + G N
Sbjct: 39 YGRKENGSIAAKIGDAIPHLNNSTPLVDPSVYG---------YGVQKRPLDDGVGNQL-- 87
Query: 389 GQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS 448
G + A + + +G +IG+GG + ++Q E+G I + AP DS R
Sbjct: 88 GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQI--AP-DSGGMPERPC 144
Query: 449 AFEGLWNPRSQTIDAILQLQNKT-------SEFSEKGTITTRLLVPSSKVGCILGQGGHV 501
G Q + Q+ ++ ++ TI +L+P+SKVG ++G+GG
Sbjct: 145 VLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTI-QEILIPASKVGLVIGKGGET 203
Query: 502 INEMRRRT 509
I +++ RT
Sbjct: 204 IKQLQERT 211
>gi|198433420|ref|XP_002121389.1| PREDICTED: similar to neuro-oncological ventral antigen 1 [Ciona
intestinalis]
Length = 543
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/245 (22%), Positives = 110/245 (44%), Gaps = 44/245 (17%)
Query: 119 SFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVI 175
+F P + ++L P G VIGK G I+ L++++ A I ++ D PG+++RV+
Sbjct: 38 TFSAPPPGQLILKVLIPGYAAGAVIGKGGQIIVQLQKDSGAIIKLSKAKDFYPGTQDRVV 97
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN 235
+I + + K QN + KV++ + +DL + D
Sbjct: 98 LIQGTAEGLMKVQNTIIE---------------------KVYEFPVPKDL-AAIIGDRPK 135
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE-MVQI 294
+ +++VPN G ++GK G I+ + E+G+ +++ P +N E ++ I
Sbjct: 136 Q-----VKIIVPNTTAGLVIGKAGATIKTIMEESGSKVQL----SQKPDGVNVQERVITI 186
Query: 295 SGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPA 354
G+ K L S ++ + D +S P ++ P+A+ +P G S + A
Sbjct: 187 KGE----KHQLMTASNIIIDKIKDDPQSASCPHI----SYSGIAGPIANANPTG-SPYAA 237
Query: 355 RNSSL 359
+++L
Sbjct: 238 GSAAL 242
Score = 54.3 bits (129), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 80/169 (47%), Gaps = 24/169 (14%)
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA----PTDSDE 442
PPGQ+ +K+L G VIGKGG + QLQ+++GA I + A P D
Sbjct: 43 PPGQL-------ILKVLIPGYAAGAVIGKGGQIIVQLQKDSGAIIKLSKAKDFYPGTQDR 95
Query: 443 RVIRASAFEGLWNPRSQTIDAILQL---QNKTSEFSEKGTITTRLLVPSSKVGCILGQGG 499
V+ EGL ++ I+ + + ++ + ++ +++VP++ G ++G+ G
Sbjct: 96 VVLIQGTAEGLMKVQNTIIEKVYEFPVPKDLAAIIGDRPK-QVKIIVPNTTAGLVIGKAG 154
Query: 500 HVINEMRRRTQADIRVVGARVKLQDPHPGSS--ECIVDIRGSSEHLISA 546
I + + G++V+L G + E ++ I+G L++A
Sbjct: 155 ATIKTIMEES-------GSKVQLSQKPDGVNVQERVITIKGEKHQLMTA 196
>gi|226289821|gb|EEH45305.1| KH domain RNA-binding protein [Paracoccidioides brasiliensis Pb18]
Length = 364
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/316 (22%), Positives = 136/316 (43%), Gaps = 46/316 (14%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ + G +RV+ +
Sbjct: 48 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG----------- 96
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIE---EDLFGGMASDDDNENSTITARLLVP 247
P A A V ++E + GG+ S+ N T RLL+
Sbjct: 97 --------------PLQGAAKAYAIVAKSLLEGAPQLGMGGVVSN----NGTHPVRLLIS 138
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+N +G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E
Sbjct: 139 HNQMGTIIGRQGLKIKYIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAVWE 194
Query: 308 VSTLLHQNPRKDKPPSSFPQAY----GGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
+ L + ++ + A GG ++ G S+ N + +G
Sbjct: 195 IGKCLIDDWQRGTGTVLYNPAVRASVGGAPINNSLGSGGSSGGYGGRSY---NRTGNGAD 251
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
+ GGY R S + N P + + I + +G +IG+GG + ++
Sbjct: 252 FSDQTGGY---SRRSNSDAANRGIPLVTEDGEEVQTQNISIPSDMVGCIIGRGGSKISEI 308
Query: 424 QQETGASIHVEDAPTD 439
++ +GA I + AP D
Sbjct: 309 RRVSGARISIAKAPHD 324
Score = 44.7 bits (104), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNP 456
+++ + S+ + G +IGK G NV L+ ETG V +RV+ + +G
Sbjct: 45 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGAAKA 104
Query: 457 RSQTIDAILQLQ---NKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ ++L+ S GT RLL+ +++G I+G+ G I + + + +
Sbjct: 105 YAIVAKSLLEGAPQLGMGGVVSNNGTHPVRLLISHNQMGTIIGRQGLKIKYI--QDASGV 162
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
R+V + L P S+E IV+++G+ E + A
Sbjct: 163 RMVAQKEML----PQSTERIVEVQGTPEGIEKA 191
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 284 TQNISIPSDMVGCIIGRGGSKISEIRRVSGARISIAKA----PHDETGERMFTIMGSAAA 339
Query: 301 AKRALYEVSTLLHQNPRKDK 320
++ALY LL++N +K
Sbjct: 340 NEKALY----LLYENLEAEK 355
Score = 41.6 bits (96), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%), Gaps = 8/61 (13%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKL-QDPHPGSSECIVDIRGS 539
T + +PS VGCI+G+GG I+E+R RV GAR+ + + PH + E + I GS
Sbjct: 284 TQNISIPSDMVGCIIGRGGSKISEIR-------RVSGARISIAKAPHDETGERMFTIMGS 336
Query: 540 S 540
+
Sbjct: 337 A 337
>gi|417411544|gb|JAA52203.1| Putative k-logy type rna binding protein, partial [Desmodus
rotundus]
Length = 544
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/330 (21%), Positives = 133/330 (40%), Gaps = 86/330 (26%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKIA 185
TV +L P+ K+G VIGK G +K L+E T K+ + +P ++ + + P K+
Sbjct: 135 TVQEVLIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRMTGDPFKVQ 194
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL--FGGMASDDDNENSTITAR 243
+ A++ +L++ I E+D F G D +
Sbjct: 195 Q----------------------AREMVLEI---IREKDQADFRGARGDFAPRTGGGSLE 229
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P+ +
Sbjct: 230 VSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMGPPDRCQH 284
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMP 363
A + ++ L+ +D +GG +A G W
Sbjct: 285 AAHVINELILTAQERD--------GFGG-------LAVARGRGRGRGDW----------- 318
Query: 364 STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQL 423
+G+ PG + E++ A K G VIGKGG N+K +
Sbjct: 319 -------------SLGT-------PGGIQEIT------YTVPADKCGLVIGKGGENIKSI 352
Query: 424 QQETGASIHVEDAPTDSDERVIRASAFEGL 453
Q++GA + ++ P + + +R G+
Sbjct: 353 NQQSGAHVELQRNPPPNTDPSLRIFTIRGI 382
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 87/432 (20%), Positives = 159/432 (36%), Gaps = 123/432 (28%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 56 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTP------------ 103
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
ES+E A+ L ++ DR G +D + S+ +L+P + VG
Sbjct: 104 -------ESIE---LAKRLLGQIVDR-----CRNGPGFHNDVDGSSTVQEVLIPASKVGL 148
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++++G P ++A V ++
Sbjct: 149 VIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRMTGDPFKVQQAREMVLEIIR 205
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G GD
Sbjct: 206 EKDQAD-----------------------------------------------FRGARGD 218
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
R G GS+ P F++ I VIG+ G +K++Q + G I
Sbjct: 219 FAPRTGGGSLEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 261
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF------------------- 474
+ S ER + + I+ ++ + F
Sbjct: 262 KPDDGISPERAAQVMGPPDRCQHAAHVINELILTAQERDGFGGLAVARGRGRGRGDWSLG 321
Query: 475 SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ-DPHPGS--SE 531
+ G VP+ K G ++G+GG I + +++ GA V+LQ +P P + S
Sbjct: 322 TPGGIQEITYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPNTDPSL 374
Query: 532 CIVDIRGSSEHL 543
I IRG + +
Sbjct: 375 RIFTIRGIPQQI 386
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 70/155 (45%), Gaps = 7/155 (4%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q + G N G + A + + +G +IG+GG + ++Q
Sbjct: 20 PSVYGYGVQKRPLDDGVGNQL--GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQA 77
Query: 426 ETGASIHVEDAPTDSDER--VIRAS--AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
E+G I + + ER V+ + + E Q +D ++ T+
Sbjct: 78 ESGCKIQIASESSGIPERPCVLTGTPESIELAKRLLGQIVDRCRNGPGFHNDVDGSSTV- 136
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
+L+P+SKVG ++G+GG I +++ RT + ++
Sbjct: 137 QEVLIPASKVGLVIGKGGETIKQLQERTGVKMVMI 171
>gi|327307466|ref|XP_003238424.1| KH domain RNA-binding protein [Trichophyton rubrum CBS 118892]
gi|326458680|gb|EGD84133.1| KH domain RNA-binding protein [Trichophyton rubrum CBS 118892]
Length = 367
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 75/321 (23%), Positives = 139/321 (43%), Gaps = 45/321 (14%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ + G +RV+ +
Sbjct: 51 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTG----------- 99
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
P A V ++E GM N N T + RLL+ +N
Sbjct: 100 --------------PLQGTSKAYSIVAKSLLEGAPQMGMGGVVQN-NGTHSVRLLISHNQ 144
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P ++A++E+
Sbjct: 145 MGTIIGRQGLKIKYIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPEGIEKAIWEIGK 200
Query: 311 LLHQNPRKDKPPSSF-PQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM-----PS 364
L + ++ + P S + +P S + N + +G PS
Sbjct: 201 CLIDDWQRGTGTVLYNPAVRASVGSSSGQGSVTGTNPSYGGSSRSYNRTGNGADFSDHPS 260
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQ 424
+ G D P+R G G+ EV + I + +G +IG+GG + +++
Sbjct: 261 SYSRRGNNDNPNR---GIPLVTEDGE--EVQTQ---NISIPSDMVGCIIGRGGTKISEIR 312
Query: 425 QETGASIHVEDAP-TDSDERV 444
+ +GA I + AP D+ ER+
Sbjct: 313 RSSGARISIAKAPHDDTGERM 333
Score = 46.6 bits (109), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 39/153 (25%), Positives = 73/153 (47%), Gaps = 10/153 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNP 456
+++ + S+ + G +IGK G NV L+ ETG V +RV+ + +G
Sbjct: 48 LTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVQGVHDRVLTVTGPLQGTSKA 107
Query: 457 RSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
S ++L+ GT + RLL+ +++G I+G+ G I + + + +
Sbjct: 108 YSIVAKSLLEGAPQMGMGGVVQNNGTHSVRLLISHNQMGTIIGRQGLKIKYI--QDASGV 165
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
R+V + L P S+E IV+++G+ E + A
Sbjct: 166 RMVAQKEML----PQSTERIVEVQGTPEGIEKA 194
Score = 43.5 bits (101), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
T + +P++MVGC++G+ G I +R +GA I + A P + M I G
Sbjct: 287 TQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKA----PHDDTGERMFTIMGSAQA 342
Query: 301 AKRALYEVSTLLHQNPRKDK 320
++ALY LL++N +K
Sbjct: 343 NEKALY----LLYENLEAEK 358
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 6/61 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T + +PS VGCI+G+GG I+E+RR + A I + A PH + E + I GS+
Sbjct: 287 TQNISIPSDMVGCIIGRGGTKISEIRRSSGARISIAKA------PHDDTGERMFTIMGSA 340
Query: 541 E 541
+
Sbjct: 341 Q 341
>gi|341891904|gb|EGT47839.1| CBN-PES-4 protein [Caenorhabditis brenneri]
Length = 438
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 37/189 (19%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQN 189
R+L +++G +IGK G+ +K +REE+ AKI ++D GS ER++ I + I K N
Sbjct: 79 RLLMQGKEVGSIIGKKGDQIKKIREESGAKINISD---GSCPERIVTITGTLGVIGKAFN 135
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
+ EED+ + + IT R++VP
Sbjct: 136 MVCNK--------------------------FEEDM---LLLPNSVPKPPITMRVIVPAT 166
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
G L+GK G I+ +R TGA+I+V ++ LP +T+ V +SG + + +V
Sbjct: 167 QCGSLIGKGGSKIKDIREATGASIQV-ASEMLP---HSTERAVTLSGTADAINLCMTQVC 222
Query: 310 TLLHQNPRK 318
+L + P K
Sbjct: 223 QILLEAPPK 231
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 81/154 (52%), Gaps = 17/154 (11%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S ++++L ++G +IGK G +K++++E+GA I++ D ER++ + G+
Sbjct: 73 SLVLTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINISDG--SCPERIVTITGTLGVI 130
Query: 455 NPRSQTI-----DAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
+ + +L L N K IT R++VP+++ G ++G+GG I ++R T
Sbjct: 131 GKAFNMVCNKFEEDMLLLPNSV----PKPPITMRVIVPATQCGSLIGKGGSKIKDIREAT 186
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
A I+V + PH S+E V + G+++ +
Sbjct: 187 GASIQVASEML----PH--STERAVTLSGTADAI 214
Score = 40.4 bits (93), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+T RLL+ VG ++GK+GD I+++R E+GA I + +D P + +V I+G
Sbjct: 76 LTIRLLMQGKEVGSIIGKKGDQIKKIREESGAKINI--SDGSCP-----ERIVTITGTLG 128
Query: 300 VAKRALYEV 308
V +A V
Sbjct: 129 VIGKAFNMV 137
>gi|344276217|ref|XP_003409905.1| PREDICTED: poly(rC)-binding protein 4-like [Loxodonta africana]
Length = 362
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 54 GNISRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 113
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGGMASDD-- 233
P I + E+ + P + LL + + +G + +
Sbjct: 114 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVT 173
Query: 234 ---------------------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 174 KLQQLSGHTVPFASPSVVAGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 233
Query: 273 IRV 275
I++
Sbjct: 234 IKI 236
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/237 (24%), Positives = 97/237 (40%), Gaps = 46/237 (19%)
Query: 221 IEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADR 280
++EDL A+ + +T RL++P + G L+GK G I+ +R TGA ++V D
Sbjct: 42 LDEDLCAAPANGGNISRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVA-GDL 100
Query: 281 LPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFP------------QA 328
LP +T+ V +SG P+ + ++ ++ ++P K P Q
Sbjct: 101 LP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQG 157
Query: 329 YG--GQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC 386
+ GQ PA + + L + P + S+ G PS S
Sbjct: 158 FSVQGQYGAVTPAEVTKLQQLSGHTVPFASPSVVA----------GLDPSTQTS------ 201
Query: 387 PPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
S EF L IG VIG+ G + +++Q +GA I + + + ER
Sbjct: 202 --------SQEF----LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGER 246
Score = 42.0 bits (97), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+T RL++P+S+ G ++G+ G I E+R T A ++V G D P S+E V + G
Sbjct: 61 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAG------DLLPNSTERAVTVSGV 114
Query: 540 SEHLI 544
+ +I
Sbjct: 115 PDAII 119
>gi|148222025|ref|NP_001090223.1| neuro-oncological ventral antigen 2 [Xenopus laevis]
gi|49256115|gb|AAH72959.1| Nova1 protein [Xenopus laevis]
Length = 413
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/377 (20%), Positives = 148/377 (39%), Gaps = 90/377 (23%)
Query: 114 SSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGS 170
+S ++S ++ + ++L PS G +IGK G + L+ ET A I ++ D PG+
Sbjct: 20 TSTKRSNTAAEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGT 79
Query: 171 EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE--DLFGG 228
ERV ++ S +ALL VH+ I E+ ++ G
Sbjct: 80 TERVCLVQGS-----------------------------AEALLSVHNFIAEKVREVPQG 110
Query: 229 MASDD----------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPA 278
+D N A+L+VPN G ++GK G ++ + E+GA +++
Sbjct: 111 APKNDLGVLLPPQSTINAERAKQAKLIVPNTTAGLIIGKGGATVRNIMEESGAWVQL--- 167
Query: 279 DRLPPCAMNTDE-MVQISGKPNVAKRALYEV-----------------STLLHQNPRKDK 320
P N E +V +SG+P+ ++A++ + S + Q P +
Sbjct: 168 -SQKPAGSNLHERVVTVSGEPSQVQKAIHSIIHKSREDPPQGTTHLNISYINTQGPVANS 226
Query: 321 PPSSFPQAYG--------------------GQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
P+ P A G G + + A + + G S+ N +
Sbjct: 227 NPTGSPYAGGAAEPVLTPFQPAPPAPPAISGGDLLAISAALNTLASYGYSTGMGYNPLVG 286
Query: 361 GM--PSTPWMGGYGDQPSRMGSGSINSCPPGQMG--EVSAEFSMKILCSAGKIGGVIGKG 416
G+ + + Y + +MG V+ + ++++ +G ++GKG
Sbjct: 287 GVHPAAVNLLASYTGEAGPSLGLGGGGILLEKMGAESVTGKETLEMAVPETLVGAILGKG 346
Query: 417 GFNVKQLQQETGASIHV 433
G + + Q+ TGA I +
Sbjct: 347 GKTLVEYQELTGARIQI 363
Score = 54.7 bits (130), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 50/78 (64%), Gaps = 4/78 (5%)
Query: 470 KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS 529
+++ +E G + ++L+PS G I+G+GG I +++R T A I++ K +D +PG+
Sbjct: 24 RSNTAAEDGELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKL----SKSKDFYPGT 79
Query: 530 SECIVDIRGSSEHLISAH 547
+E + ++GS+E L+S H
Sbjct: 80 TERVCLVQGSAEALLSVH 97
Score = 47.0 bits (110), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 25/160 (15%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERVI----RASA 449
E +K+L + G +IGKGG + QLQ+ETGA+I + +D + ERV A A
Sbjct: 33 ELFLKVLIPSYAAGSIIGKGGQTIVQLQRETGATIKLSKSKDFYPGTTERVCLVQGSAEA 92
Query: 450 FEGLWNPRSQTIDAILQLQNKT---------SEFSEKGTITTRLLVPSSKVGCILGQGGH 500
+ N ++ + + Q K S + + +L+VP++ G I+G+GG
Sbjct: 93 LLSVHNFIAEKVREVPQGAPKNDLGVLLPPQSTINAERAKQAKLIVPNTTAGLIIGKGGA 152
Query: 501 VINEMRRRTQADIRVVGARVKLQDPHPGSS--ECIVDIRG 538
+ + + GA V+L GS+ E +V + G
Sbjct: 153 TVRNIMEES-------GAWVQLSQKPAGSNLHERVVTVSG 185
>gi|426226097|ref|XP_004007190.1| PREDICTED: far upstream element-binding protein 3 [Ovis aries]
Length = 574
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 108/475 (22%), Positives = 179/475 (37%), Gaps = 137/475 (28%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P I +
Sbjct: 91 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQ------- 143
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
A+ L ++ DR F +D + NST+ + +P + VG
Sbjct: 144 ---------------AKRLLGQIVDRCRNGPGF----HNDVDGNSTVQ-EIPIPASKVGL 183
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ TG + ++ LP A D+ ++I+G P ++A V ++
Sbjct: 184 VIGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIR 240
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G D
Sbjct: 241 EKDQAD-----------------------------------------------FRGVRSD 253
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SRMG GSI P F+ +G VIG+ G +K++Q + G I
Sbjct: 254 FSSRMGGGSIEVSVP--------RFA---------VGIVIGRNGEMIKKIQNDAGVRIQF 296
Query: 434 EDAPTDSDERVIRA--------------SAFEGLWNPRSQTIDAILQLQNK----TSEFS 475
+ S ER + S P Q +L+ K ++ F
Sbjct: 297 KPDDGISPERAAQVMGPPDRCQHAAHVISELILTAQPPPQRGKLVLEAAGKHHLSSAFFQ 356
Query: 476 EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSEC--- 532
E+ T T VP+ K G ++G+GG I + +++ GA V+LQ P S++
Sbjct: 357 ERDTYT----VPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPSTDPSLR 405
Query: 533 IVDIRG------SSEHLISAHGTYQSFMTS---GQSMKVQP--SSYQNINPQQSS 576
I IRG + HLI S GQS QP + +QN P +SS
Sbjct: 406 IFTIRGLPPQIEVARHLIDEKVGGTSLGAPGPFGQSPFSQPPAAPHQNTFPPRSS 460
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 92/196 (46%), Gaps = 38/196 (19%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIY 178
GNS TV I P+ K+G VIGK G +K L+E T K+ + +P ++ + I
Sbjct: 167 GNS----TVQEIPIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRIT 222
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL--FGGMASDDDNE 236
P K+ + A++ +L++ I E+D F G+ SD +
Sbjct: 223 GDPFKVQQ----------------------AREMVLEI---IREKDQADFRGVRSDFSSR 257
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
+ + VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G
Sbjct: 258 MGGGSIEVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMG 312
Query: 297 KPNVAKRALYEVSTLL 312
P+ + A + +S L+
Sbjct: 313 PPDRCQHAAHVISELI 328
Score = 43.9 bits (102), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 66/148 (44%), Gaps = 7/148 (4%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q + G N G + A + + +G +IG+GG + ++Q
Sbjct: 55 PSVYGYGVQKRPLDDGVGNQL--GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQA 112
Query: 426 ETGASIHVEDAPTDSDER--VIRAS--AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
E+G I + + ER V+ + + E Q +D ++ T+
Sbjct: 113 ESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDVDGNSTV- 171
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRT 509
+ +P+SKVG ++G+GG I +++ RT
Sbjct: 172 QEIPIPASKVGLVIGKGGETIKQLQERT 199
>gi|198427864|ref|XP_002125995.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein K
[Ciona intestinalis]
Length = 402
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/243 (25%), Positives = 106/243 (43%), Gaps = 44/243 (18%)
Query: 92 KRPNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTV-YRILCPSRKIGGVIGKAGNIV 150
KR ++ + G +K+ S G +P+D + R+L PS G +IGK G +
Sbjct: 11 KRSHDDVRESGDSDVKRSRSSFQHDRFHQGGREPSDKIELRVLIPSHTAGAIIGKGGANI 70
Query: 151 KSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQ 210
+ LR+E A + V D+ ER++ + +AKT +D+A K
Sbjct: 71 RDLRQEFNANVQVPDS--HGFERIV------SAVAKTI---EDAANICGK---------- 109
Query: 211 DALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETG 270
+ +++R+ + G + R+LV + G ++G +G I+ LR TG
Sbjct: 110 -VVEALNERMHHPEKVGCL-------------RMLVHKSQAGTIIGLKGSRIKELREMTG 155
Query: 271 ANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQ----NPRKDKPPSSFP 326
ANI+V C +TD + Q+ G +V + + + L Q P K+ P+ F
Sbjct: 156 ANIKV----NQECCPESTDRVCQVRGTADVVVKCVARILEHLQQAPPKGPIKNYDPNCFD 211
Query: 327 QAY 329
+Y
Sbjct: 212 DSY 214
Score = 59.3 bits (142), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 81/154 (52%), Gaps = 15/154 (9%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA--F 450
E S + +++L + G +IGKGG N++ L+QE A++ V D+ ER++ A A
Sbjct: 43 EPSDKIELRVLIPSHTAGAIIGKGGANIRDLRQEFNANVQVPDSH--GFERIVSAVAKTI 100
Query: 451 EGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
E N + ++A+ N+ EK R+LV S+ G I+G G I E+R T
Sbjct: 101 EDAANICGKVVEAL----NERMHHPEK-VGCLRMLVHKSQAGTIIGLKGSRIKELREMTG 155
Query: 511 ADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
A+I+V Q+ P S++ + +RG+++ ++
Sbjct: 156 ANIKVN------QECCPESTDRVCQVRGTADVVV 183
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
N N S + GN T ++ P+ VIGK G ++ +RE++ A I + + PG
Sbjct: 313 NLYNDSGDGQTGNGDQKTT--QVTIPTSCAASVIGKTGQRIRQIREDSGAVIVIDEAGPG 370
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKE 201
EERVI I + + Q +A E K E
Sbjct: 371 EEERVISITGNEEQTQNAQFLLQKNAEEPKDE 402
>gi|401885149|gb|EJT49276.1| cytoplasm protein [Trichosporon asahii var. asahii CBS 2479]
gi|406694587|gb|EKC97911.1| cytoplasm protein [Trichosporon asahii var. asahii CBS 8904]
Length = 351
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 72/330 (21%), Positives = 138/330 (41%), Gaps = 49/330 (14%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPT 182
+ P + R L +++ G +IGK G + ++R+ K V+ +PG ++RV+ + P
Sbjct: 14 ASPEELTLRSLVSTKEAGIIIGKGGATIANIRQVANCKAGVSKVVPGVQDRVLSVSGDPE 73
Query: 183 KIAKTQNKDDDSAAET--KKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
IA + ET SM P N
Sbjct: 74 AIAAAYAEVARLLLETPLSDSSMPPPPV----------------------------NQFT 105
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
+ RLL+ +N++G ++G+ G I++++ +GA + V + LP +T+ +V++ G +
Sbjct: 106 SIRLLISHNLMGTVIGRAGVKIKQIQDMSGARM-VASKEMLP---QSTERVVEVQGAQDA 161
Query: 301 AKRALYEVSTLLHQNPRKDKPPSSF-PQAYGGQN-FHSPPAPMADMHPLGNSSWPARNSS 358
K A++E++ L ++ ++ + P A G A P G R +S
Sbjct: 162 IKTAIFEIAKCLLEDWERNTGTVQYHPGAAGDAGVLAGGLGAQAVTGPTGG----IRRTS 217
Query: 359 LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAE---------FSMKILCSAGKI 409
+ G S + + R+ GSI+ GQ VS + I + +
Sbjct: 218 MGGFGSGSPGPNFNNSDRRVSRGSISGGTSGQERRVSESQPVLNDPNLRTQNISIPSDMV 277
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
G +IG+GG + ++++ +G+ I + P D
Sbjct: 278 GCIIGRGGTKITEIRRLSGSRISIAKVPHD 307
>gi|212529012|ref|XP_002144663.1| KH domain RNA binding protein [Talaromyces marneffei ATCC 18224]
gi|210074061|gb|EEA28148.1| KH domain RNA binding protein [Talaromyces marneffei ATCC 18224]
Length = 461
Score = 63.2 bits (152), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 84/363 (23%), Positives = 147/363 (40%), Gaps = 83/363 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ IGK G V +R + AK TV+D G+ ER++ + S P
Sbjct: 107 RAVISSQEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTV-SGP--------- 156
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
QDA+ K II + + ++ T RLL+P+ +
Sbjct: 157 -------------------QDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHIL 197
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS- 309
+G ++GK G I+ ++ +GA R+ +D P ++T+ + + G + A Y V+
Sbjct: 198 IGSIIGKGGVRIREIQEASGA--RLNASDACLP--LSTERSLVVLGVADAVHIATYYVAV 253
Query: 310 TLLHQNPRKDKPPSS-----------------------FPQAYGGQNFHSP--------- 337
TL+ Q + P++ PQ GGQ H
Sbjct: 254 TLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYVPQPAGGQYGHPDSARRHYPQN 313
Query: 338 ----PAPMADMHPLGN--SSWPARNSSLH---GMPSTPWMGGYGDQPSRMGSGSINSCPP 388
P P +P G + P LH G P+ G QP+ G+ ++ P
Sbjct: 314 NRPGPGPYGAPYPHGGPAAQAPVTQPPLHYGGGAARAPYAGAGPHQPAPYGA--PHAQPH 371
Query: 389 GQ-----MGEVSAE-FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDE 442
G G VS++ + +I +G +IGKGG + +++ +G+ I + + +S+E
Sbjct: 372 GASTQPLAGVVSSQPITQQIYIPNDMVGAIIGKGGTKINEIRHLSGSVIKINEPQENSNE 431
Query: 443 RVI 445
R++
Sbjct: 432 RLV 434
Score = 47.8 bits (112), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 65/134 (48%), Gaps = 14/134 (10%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S+ ++ + S+ + IGKGG NV Q+++ +GA V D + ER++ S G
Sbjct: 101 SSWIHIRAVISSQEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTVS---GPQ 157
Query: 455 NPRSQTIDAILQLQN----KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
+ ++ I++ N + ++ T RLL+P +G I+G+GG I E++ +
Sbjct: 158 DAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHILIGSIIGKGGVRIREIQEAS- 216
Query: 511 ADIRVVGARVKLQD 524
GAR+ D
Sbjct: 217 ------GARLNASD 224
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
IT ++ +P+ VG I+G+GG INE+R + G+ +K+ +P S+E +V I G+
Sbjct: 387 ITQQIYIPNDMVGAIIGKGGTKINEIR-------HLSGSVIKINEPQENSNERLVTITGT 439
Query: 540 SE 541
E
Sbjct: 440 QE 441
Score = 39.3 bits (90), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%), Gaps = 5/73 (6%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
IT ++ +PN+MVG ++GK G I +R +G+ I++ P + + +V I+G
Sbjct: 387 ITQQIYIPNDMVGAIIGKGGTKINEIRHLSGSVIKI-----NEPQENSNERLVTITGTQE 441
Query: 300 VAKRALYEVSTLL 312
+ ALY + L
Sbjct: 442 CNQMALYMLYARL 454
>gi|473912|gb|AAA21731.1| phosphoprotein [Mus cookii]
Length = 464
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 117 EQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
EQ+F S+ D + RIL S+ G VIGK G +K+LR + A ++V D+ ER+
Sbjct: 30 EQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERI 87
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESME---PHCAAQDALLKVHDRIIEEDLFGGMAS 231
+ I + I + K T +E ++ P +Q L ++ + G S
Sbjct: 88 LSISADIETIGEILKK----IIPTLEEGLQLPSPTATSQLPLESDAVEVLNYPHYKG--S 141
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
D D E RLL+ + G ++G +G I+ LR T I++ C +TD +
Sbjct: 142 DFDCE-----LRLLIHQTLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRV 192
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAY 329
V I GKP+ + + L+ ++P K + P Y
Sbjct: 193 VLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFY 230
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 77/168 (45%), Gaps = 32/168 (19%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA---------- 449
++IL + G VIGKGG N+K L+ + AS+ V D + ER++ SA
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPD--SSGPERILSISADIETIGEILK 102
Query: 450 ------FEGLWNPRSQTIDAILQLQNKTSEFSE----KGT---ITTRLLVPSSKVGCILG 496
EGL P S T + L L++ E KG+ RLL+ + G I+G
Sbjct: 103 KIIPTLEEGLQLP-SPTATSQLPLESDAVEVLNYPHYKGSDFDCELRLLIHQTLAGGIIG 161
Query: 497 QGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
G I E+R TQ I++ Q+ P S++ +V I G + ++
Sbjct: 162 VKGAKIKELRENTQTTIKL------FQECCPHSTDRVVLIGGKPDRVV 203
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
++S + S+G+ ++ P G +IGK G +K +R E+ A I + + + G
Sbjct: 370 DYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 170 SEERVIIIYSSPTKIAKTQ 188
SE+R+I I + +I Q
Sbjct: 430 SEDRIITITGTQDQIQNAQ 448
Score = 42.7 bits (99), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GG S D IT ++ +P ++ G ++GK G I+++R E+GA+I++ P
Sbjct: 375 GGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEG 429
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+ D ++ I+G + + A Y + + Q
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVKQ 457
Score = 42.7 bits (99), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
ITT++ +P G I+G+GG I ++R + GA +K+ +P GS + I+ I G+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHES-------GASIKIDEPLEGSEDRIITITGT 440
Query: 540 SEHLISAHGTYQS 552
+ + +A Q+
Sbjct: 441 QDQIQNAQYLLQN 453
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGKGG +KQ++ E+GASI +++ S++R+I + + Q +A LQN
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQN 453
Query: 470 KTSEFSE 476
++++
Sbjct: 454 SVKQYAD 460
>gi|340521021|gb|EGR51256.1| predicted protein [Trichoderma reesei QM6a]
Length = 475
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 142/367 (38%), Gaps = 80/367 (21%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S + +IGK G V ++R+ + AK TV+D G+ ER++ +
Sbjct: 122 RAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTV------------- 168
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
DA+ K II + + T RLL+P+ +
Sbjct: 169 ----------------SGIVDAVAKAFGLIIRTLNNEPLTEASTASSKTYPLRLLIPHIL 212
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV-S 309
+G ++GK G I+ ++ +GA R+ +D P M+++ + + G + A Y V S
Sbjct: 213 IGSIIGKGGSRIREIQEASGA--RLNASDSCLP--MSSERSLVVMGVADAVHIATYYVGS 268
Query: 310 TLLHQ-NPRKDKPPSSFPQAYGGQNFHSPPAPMADM----HPLGNSSWPARN-------- 356
TLL Q N R P +S G S P M + P A N
Sbjct: 269 TLLEQLNERFGGPAASAYATRSGAPVGSIPGGMQVVPYSPQPASGHYGRAENYGRHQERR 328
Query: 357 ---------------SSLHGMPSTPWMGGYGDQPSRMGSGS--------------INSCP 387
+ HG P+ P G G QP+ G+ + + P
Sbjct: 329 PHHMPPAPYPQPYAHGAPHGTPAMPMQYGAG-QPAAYGAAAPHVQPHMAPHTGPQAHGAP 387
Query: 388 PGQ---MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 444
GQ G + +I +G +IGKGG + +++Q +G+ I + + +S+ER+
Sbjct: 388 QGQPMHAGMPGGPITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERL 447
Query: 445 IRASAFE 451
+ + E
Sbjct: 448 VTITGTE 454
Score = 46.6 bits (109), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 66/135 (48%), Gaps = 16/135 (11%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S+ ++ + S+ + +IGKGG NV +++ + A V D + ER++ S G+
Sbjct: 116 SSWIHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVS---GIV 172
Query: 455 NPRSQTIDAILQLQN-----KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
+ ++ I++ N + S S K T RLL+P +G I+G+GG I E++ +
Sbjct: 173 DAVAKAFGLIIRTLNNEPLTEASTASSK-TYPLRLLIPHILIGSIIGKGGSRIREIQEAS 231
Query: 510 QADIRVVGARVKLQD 524
GAR+ D
Sbjct: 232 -------GARLNASD 239
Score = 45.8 bits (107), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 7/64 (10%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIR 537
G IT ++ +P+ VG I+G+GG INE+R+ + G+ +K+ +P S+E +V I
Sbjct: 399 GPITQQIYIPNDMVGAIIGKGGQKINEIRQMS-------GSVIKINEPQDNSNERLVTIT 451
Query: 538 GSSE 541
G+ E
Sbjct: 452 GTEE 455
Score = 41.2 bits (95), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV-LPADRLPPCAMNTDEMVQISGKP 298
IT ++ +PN+MVG ++GK G I +R +G+ I++ P D + + +V I+G
Sbjct: 401 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDN------SNERLVTITGTE 454
Query: 299 NVAKRALYEVSTLL 312
+ ALY + + L
Sbjct: 455 ECNRMALYMLYSRL 468
>gi|355709455|gb|AES03597.1| poly binding protein 4 [Mustela putorius furo]
Length = 206
Score = 62.8 bits (151), Expect = 5e-07, Method: Composition-based stats.
Identities = 49/188 (26%), Positives = 88/188 (46%), Gaps = 32/188 (17%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +RE++ A+IT+++ ER+ I S +
Sbjct: 30 RMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTAAVF----- 82
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
H + A ++EDL A+ + +T RL++P +
Sbjct: 83 ---------------HAVSMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPASQ 121
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 122 CGSLIGKAGTKIKEIRETTGAQVQV-AGDLLPN---STERAVTVSGVPDAIILCVRQICA 177
Query: 311 LLHQNPRK 318
++ ++P K
Sbjct: 178 VILESPPK 185
Score = 52.0 bits (123), Expect = 0.001, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 75/155 (48%), Gaps = 10/155 (6%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEG 452
E+S ++++L ++G +IGK G VK++++++ A I + + I S
Sbjct: 22 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEGSCPERITTITGST-AA 80
Query: 453 LWNPRSQ---TIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
+++ S +D L + +T RL++P+S+ G ++G+ G I E+R T
Sbjct: 81 VFHAVSMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETT 140
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
A ++V G D P S+E V + G + +I
Sbjct: 141 GAQVQVAG------DLLPNSTERAVTVSGVPDAII 169
Score = 46.2 bits (108), Expect = 0.059, Method: Composition-based stats.
Identities = 24/65 (36%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 104 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 163
Query: 180 SPTKI 184
P I
Sbjct: 164 VPDAI 168
>gi|345485195|ref|XP_001603038.2| PREDICTED: far upstream element-binding protein 1-like isoform 1
[Nasonia vitripennis]
Length = 767
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 84/375 (22%), Positives = 147/375 (39%), Gaps = 115/375 (30%)
Query: 218 DRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLP 277
D+ + GG+ ++D + VP+ MVG ++G+ G+ I RL+SETG I++
Sbjct: 82 DQPVSAAALGGICNED----------IRVPDKMVGLIIGRGGEQITRLQSETGCKIQMAA 131
Query: 278 ADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSP 337
P + ++G + RA V ++++Q +
Sbjct: 132 ESGGMP-----ERTCTLTGSRDAVNRAKELVQSIVNQRVK-------------------- 166
Query: 338 PAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAE 397
P D+ P N +P SS + + G+ PG
Sbjct: 167 --PGEDLIPGANPPYPGPASSASSSVTASILAGH----------------PG-------- 200
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGAS-IHVEDAPTDSDERVIRASAFEGLWNP 456
++I+ K+G +IGKGG +KQLQ+++GA + ++D P E+ +R +
Sbjct: 201 -FVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDGPGQEQEKPLRITGDPQKVEH 259
Query: 457 RSQTIDAI-----LQLQNKTSE-------FSEKGT-----------ITTR---------- 483
Q + + +QL N+ + FS+ G +T R
Sbjct: 260 AKQLVYELIAEKEMQLYNRGTRNFSSNNSFSQDGNSESGEDRRGNGVTGRPSEYGSWEGN 319
Query: 484 -----------LLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS-SE 531
VPS+K G I+G+GG I E+ ++T GA +L +PG+ ++
Sbjct: 320 RPAGEGKVEFSYPVPSNKCGIIIGKGGVTIKEINQQT-------GAHCELDRRNPGTDTD 372
Query: 532 CIVDIRGSSEHLISA 546
IRG+ E + A
Sbjct: 373 KFFTIRGTPEQVEHA 387
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 103/451 (22%), Positives = 186/451 (41%), Gaps = 96/451 (21%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKD 191
I P + +G +IG+ G + L+ ET KI +A G ER + T ++D
Sbjct: 98 IRVPDKMVGLIIGRGGEQITRLQSETGCKIQMAAESGGMPERTCTL---------TGSRD 148
Query: 192 DDSAAETKKESMEPHCAAQDALLKVHDRIIE-EDLFGGM--------ASDDDNENSTITA 242
+ A+ +S+ V+ R+ EDL G +S + ++I A
Sbjct: 149 AVNRAKELVQSI------------VNQRVKPGEDLIPGANPPYPGPASSASSSVTASILA 196
Query: 243 ------RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
+++P VG ++GK G+ I++L+ ++GA + V+ ++ ++I+G
Sbjct: 197 GHPGFVEIMIPGPKVGLIIGKGGETIKQLQEKSGAKMVVIQDG----PGQEQEKPLRITG 252
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAY--GGQNFHSPPAPMADMHPLGNSSWPA 354
P + A V L+ + Q Y G +NF S N+S+
Sbjct: 253 DPQKVEHAKQLVYELIAEKEM---------QLYNRGTRNFSS------------NNSFSQ 291
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
+S G G +PS GS N GE EFS + + K G +IG
Sbjct: 292 DGNSESGEDRR--GNGVTGRPSEYGSWEGNRP----AGEGKVEFSYPVPSN--KCGIIIG 343
Query: 415 KGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQ---- 468
KGG +K++ Q+TGA ++ + TD+D+ E + + + + +
Sbjct: 344 KGGVTIKEINQQTGAHCELDRRNPGTDTDKFFTIRGTPEQVEHAKRVFAEKLGGGMGSSS 403
Query: 469 -----NKTSEFS------EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
+ +E+ + + VP++K G I+G+GG I ++ ++T G
Sbjct: 404 NGYPTGRPNEYGGWDVNRQGNKVEVTYPVPTNKCGIIIGKGGETIKQINQQT-------G 456
Query: 518 ARVKLQDPHPGS-SECIVDIRGSSEHLISAH 547
A +L +PG+ +E I+G+ E + A
Sbjct: 457 AHCELDRRNPGTETEKFFTIKGTPEQVEHAQ 487
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 42/183 (22%), Positives = 73/183 (39%), Gaps = 19/183 (10%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE-ERVIIIYSSPTKIAKTQNKDD 192
PS K G +IGK G +K + ++T A + PG++ ++ I +P ++
Sbjct: 333 VPSNKCGIIIGKGGVTIKEINQQTGAHCELDRRNPGTDTDKFFTIRGTPEQV-------- 384
Query: 193 DSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVG 252
E K + +GG D + + + + VP N G
Sbjct: 385 ----EHAKRVFAEKLGGGMGSSSNGYPTGRPNEYGGW--DVNRQGNKVEVTYPVPTNKCG 438
Query: 253 CLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
++GK G+ I+++ +TGA+ + DR P T++ I G P + A S L
Sbjct: 439 IIIGKGGETIKQINQQTGAHCEL---DRRNP-GTETEKFFTIKGTPEQVEHAQRIFSEKL 494
Query: 313 HQN 315
N
Sbjct: 495 GNN 497
>gi|218191842|gb|EEC74269.1| hypothetical protein OsI_09495 [Oryza sativa Indica Group]
Length = 263
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 62/227 (27%), Positives = 105/227 (46%), Gaps = 23/227 (10%)
Query: 211 DALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETG 270
D ++K + I+E+ L G S++ + RL+VPN+ G ++GK G I+ ++
Sbjct: 19 DEVIKAMELILEKLLAEGEESNEAEARPKV--RLVVPNSSCGGIIGKGGSTIKSFIEDSH 76
Query: 271 ANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPS-SFPQAY 329
A I++ P D D +V ++G + RA+Y + + L ++ PP+ S P Y
Sbjct: 77 AGIKISPQDN--NFVGLHDRLVTVTGPLDHQMRAIYLILSKLSEDVH--YPPNLSSPFPY 132
Query: 330 GGQNFHS-PPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPP 388
G F S P P+ M P P N+ +G + G Y ++P S P
Sbjct: 133 AGLGFPSYPGVPVGYMIP----QVPYNNAVNYG--PNGYGGRYQNKP---------STPM 177
Query: 389 GQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
A+ S+ I + IG V+G+ G N+ ++ Q +GA I + D
Sbjct: 178 RSPANNDAQDSLTIGIADEHIGAVVGRAGRNITEIIQASGARIKISD 224
>gi|312382238|gb|EFR27763.1| hypothetical protein AND_05166 [Anopheles darlingi]
Length = 738
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 85/386 (22%), Positives = 153/386 (39%), Gaps = 67/386 (17%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVIIIYSSPTKI 184
D R+L S +G +IG+ G+ ++ + ++++A++ V D + GS E+ I IY +P
Sbjct: 267 DFPLRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRKDNV-GSVEKAITIYGNP--- 322
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS-TITAR 243
E A +L+V M + ++ N I +
Sbjct: 323 -------------------ENCTMACKKILEV------------MQQEANSTNKGEICLK 351
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+L NN++G ++GK G+ I+R+ +T I V + + + N + ++ + G +
Sbjct: 352 ILAHNNLIGRIIGKSGNTIKRIMQDTDTKITVSSINDI--SSFNLERIITVKGTIENMSK 409
Query: 304 ALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPA-PMADMHPLGN---SSWPARNSSL 359
++S L Q+ D QA Q+ P PMA M GN +
Sbjct: 410 GESQISAKLRQSYENDL------QALAPQSIMFPGLHPMAMMSTAGNGMGFTGRTGGGGG 463
Query: 360 HGMPSTPWMGGYGDQPSRMGSG-----------SINSCPPGQMGEVSAEFSMKILCSAGK 408
G+P+ P G G GS + PPG EV + I +A
Sbjct: 464 GGVPTAPGAGAGGAGGMYPGSNFPMYQPPTGGPATGGVPPGGSSEVQETTYLYIPNNA-- 521
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQ 468
+G +IG G +++ + + +GAS+ + D + + P +Q L +
Sbjct: 522 VGAIIGTKGLHIRNIIRFSGASVKIAPLEADKPQEQQTERKVTIIGTPEAQWKAQYLIFE 581
Query: 469 NKTSEFSEKGT----ITTRLLVPSSK 490
E GT +T + VPS++
Sbjct: 582 KMREEGFVSGTDDVRLTVEIFVPSAQ 607
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 76/149 (51%), Gaps = 10/149 (6%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNP 456
+F +++L + +G +IG+ G ++ + Q++ A + V D+ V +A G NP
Sbjct: 267 DFPLRVLVQSEMVGAIIGRQGSTIRHITQQSRARVDVHRK--DNVGSVEKAITIYG--NP 322
Query: 457 RSQTI--DAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
+ T+ IL++ + + + KG I ++L ++ +G I+G+ G+ I + + T I
Sbjct: 323 ENCTMACKKILEVMQQEANSTNKGEICLKILAHNNLIGRIIGKSGNTIKRIMQDTDTKIT 382
Query: 515 VVGARVKLQDPHPGSSECIVDIRGSSEHL 543
V + D + E I+ ++G+ E++
Sbjct: 383 VSS----INDISSFNLERIITVKGTIENM 407
>gi|291358560|gb|ADD96765.1| heterogeneous nuclear ribonuclear protein K [Capra hircus]
Length = 441
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/220 (27%), Positives = 98/220 (44%), Gaps = 18/220 (8%)
Query: 113 NSSREQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS 170
+ EQ+F S+ D + RIL S+ G VIGK G +K+LR + A ++V D+
Sbjct: 26 DMEEEQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SG 83
Query: 171 EERVIIIYSSPTKIAKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGM 229
ER++ I + I + K T +E ++ P A L D + +
Sbjct: 84 PERILSISADIETIGEILKK----IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYK 139
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
SD D E RLL+ ++ G ++G +G I+ LR T I++ C +TD
Sbjct: 140 GSDFDCE-----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPQSTD 190
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAY 329
+V I GKP+ + + L+ ++P K + P Y
Sbjct: 191 RVVLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFY 230
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA---------- 449
++IL + G VIGKGG N+K L+ + AS+ V D + ER++ SA
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPD--SSGPERILSISADIETIGEILK 102
Query: 450 ------FEGLWNP----------RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGC 493
EGL P S ++ + K S+F RLL+ S G
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD----CELRLLIHQSLAGG 158
Query: 494 ILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I+G G I E+R TQ I++ Q+ P S++ +V I G + ++
Sbjct: 159 IIGVKGAKIKELRENTQTTIKL------FQECCPQSTDRVVLIGGKPDRVV 203
Score = 42.7 bits (99), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
ITT++ +P G I+G+GG I ++R + GA +K+ +P GS + I+ I G+
Sbjct: 366 ITTQVTIPKDLAGSIIGKGGQRIKQIRHES-------GASIKIDEPLEGSEDRIITITGT 418
Query: 540 SEHLISAHGTYQS 552
+ + +A Q+
Sbjct: 419 QDQIQNAQYLLQN 431
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GG S D IT ++ +P ++ G ++GK G I+++R E+GA+I++ P
Sbjct: 353 GGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEG 407
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+ D ++ I+G + + A Y + + Q
Sbjct: 408 SEDRIITITGTQDQIQNAQYLLQNSVKQ 435
Score = 42.7 bits (99), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
++S + S+G+ ++ P G +IGK G +K +R E+ A I + + + G
Sbjct: 348 DYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 407
Query: 170 SEERVIIIYSSPTKIAKTQ 188
SE+R+I I + +I Q
Sbjct: 408 SEDRIITITGTQDQIQNAQ 426
Score = 41.6 bits (96), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGKGG +KQ++ E+GASI +++ S++R+I + + Q +A LQN
Sbjct: 378 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQN 431
Query: 470 KTSEFSEK 477
++S K
Sbjct: 432 SVKQYSGK 439
>gi|196009850|ref|XP_002114790.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
gi|190582852|gb|EDV22924.1| hypothetical protein TRIADDRAFT_28388 [Trichoplax adhaerens]
Length = 360
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 75/338 (22%), Positives = 146/338 (43%), Gaps = 71/338 (21%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIY 178
NS V ++L P+ G +IGK G+++ L+ +++ +I ++ DT PG++ERVI+I
Sbjct: 16 NSSGDKVVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVIT 75
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
S + + + +E K D+ I+ + D N N
Sbjct: 76 GSIAGVRQVNRFILEKVSEEGKA----------------DKAIQYGVL------DKNRNR 113
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+ +++VPN G ++GK G I+ ++ ++GA+++V + + A++ + ++ ++G+
Sbjct: 114 QL--KMIVPNAAAGVIIGKGGSNIKEIQDKSGAHVQV--SQKKAQYAID-ERILTVTGEF 168
Query: 299 N--------VAKRALYEVSTLLHQNPRKD--KPPSSFP----QAYGGQNFHSPP--APMA 342
N + + L +++ L + + +P + P YGG N + P + A
Sbjct: 169 NERLTAWELIIWKCLEDINNLPNTSVSYSHVEPAGTLPALHSNYYGGGNANDRPMDSSAA 228
Query: 343 DMHPLGNSSW-------PARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVS 395
P + + A+ +GM S P ++PS G
Sbjct: 229 SYDPYTSERYSPTQVTQDAQADRQYGMQSYPPT-ARNNRPSSYG---------------- 271
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
E +KI IG ++GK G + +Q +GA I V
Sbjct: 272 -ETVIKIPVPDSIIGAILGKRGKVISDIQNISGAHIQV 308
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+ +LL+P+ G I+G+GG VIN+++ ++ IR+ D PG+ E ++ I GS
Sbjct: 22 VVLKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHN----NDTFPGTKERVIVITGS 77
Score = 40.4 bits (93), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 59/125 (47%), Gaps = 9/125 (7%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASI---HVEDAPTDSDERVIRASAFEGLWNP 456
+K+L G +IGKGG + LQ ++ I H D + ERVI +
Sbjct: 24 LKLLIPNYAAGSIIGKGGDVINDLQNDSKTRIRLSHNNDTFPGTKERVIVITGSIAGVRQ 83
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITT------RLLVPSSKVGCILGQGGHVINEMRRRTQ 510
++ I + + K + + G + +++VP++ G I+G+GG I E++ ++
Sbjct: 84 VNRFILEKVSEEGKADKAIQYGVLDKNRNRQLKMIVPNAAAGVIIGKGGSNIKEIQDKSG 143
Query: 511 ADIRV 515
A ++V
Sbjct: 144 AHVQV 148
>gi|341894976|gb|EGT50911.1| hypothetical protein CAEBREN_13773 [Caenorhabditis brenneri]
Length = 397
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 79/152 (51%), Gaps = 17/152 (11%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
+F +++L S+ G +IGKGG N+K+L+ E A + V D +++ ERV +A E
Sbjct: 48 GKFEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVTADE---- 101
Query: 456 PRSQTIDAILQ--LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+T+ IL+ L FSE+ R+L+ S G ++G+ G I E+R + A +
Sbjct: 102 ---KTVLNILKDVLPRLEDNFSERDPCEVRMLIHQSHAGALIGRNGSKIKELREKCSARL 158
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLIS 545
++ PGS++ ++ G +++++
Sbjct: 159 KI------FTGCAPGSTDRVLITSGEQKNVLA 184
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 93/424 (21%), Positives = 149/424 (35%), Gaps = 107/424 (25%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L S+ G +IGK G +K LR E A + V D+ + ERV + +
Sbjct: 53 RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPDS--NTPERVCTVTA----------- 99
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
D+ + K D L ++ D E D R+L+ +
Sbjct: 100 DEKTVLNILK----------DVLPRLEDNFSERD--------------PCEVRMLIHQSH 135
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCA-MNTDEMVQISGKPNVAKRALYEVS 309
G L+G+ G I+ LR + A +++ CA +TD ++ SG+ + EV
Sbjct: 136 AGALIGRNGSKIKELREKCSARLKIFTG-----CAPGSTDRVLITSGEQKNVLAIIEEVM 190
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMG 369
L + P K P +FH P+ +++
Sbjct: 191 RELKEIPIKGSATPYLP------SFHYDPSNISE-------------------------- 218
Query: 370 GYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGG----FNVKQLQQ 425
YG P M SG PP G GG + GG F QQ
Sbjct: 219 -YGGFPGTMSSGG----PPNSRGPSQQRGGQGPPGGPRSYGGAVTPGGGPRSFEAGDFQQ 273
Query: 426 ETGASI--HVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTR 483
G + + +AP ++ F G P + T T +
Sbjct: 274 FRGGPVQGYAMNAPGYPPQQ----GQFGGA--PPANT-------GYGYGPGGGGPVTTAQ 320
Query: 484 LLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+ +PS G I+G+GG I +R+ + A I + +P G E I+ I+G+ + +
Sbjct: 321 VTIPSDLGGTIIGRGGERIARIRQDSGAQITL--------EPSNGQPERIITIKGTEQQI 372
Query: 544 ISAH 547
SA
Sbjct: 373 HSAQ 376
>gi|426249910|ref|XP_004018689.1| PREDICTED: poly(rC)-binding protein 4 [Ovis aries]
Length = 425
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 117 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 176
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGG------- 228
P I + E+ + P + LL + + +G
Sbjct: 177 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGAVTPAEVT 236
Query: 229 ----------------MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
M D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 237 KLQQLSGHAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 296
Query: 273 IRV 275
I++
Sbjct: 297 IKI 299
Score = 53.5 bits (127), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 123/301 (40%), Gaps = 60/301 (19%)
Query: 150 VKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCA 208
VK +RE++ A+IT+++ GS ER+ I S + H
Sbjct: 62 VKRIREQSSARITISE---GSCPERITTITGSTAAVF--------------------HAV 98
Query: 209 AQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSE 268
+ A ++EDL A+ + +T RL++P + G L+GK G I+ +R
Sbjct: 99 SMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRET 152
Query: 269 TGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQA 328
TGA ++V D LP +T+ V +SG P+ + ++ ++ ++P K P
Sbjct: 153 TGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQICAVILESPPKGATIPYHPSL 208
Query: 329 YGGQNFHSPPAPMADMHPLGNSSWPARNSSL-----HGMP-STPWMGGYGDQPSRMGSGS 382
G S + G + PA + L H +P ++P M G PS S
Sbjct: 209 SLGTVLLSTNQGFSVQGQYG-AVTPAEVTKLQQLSGHAVPFASPSM-VPGLDPSTQTS-- 264
Query: 383 INSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDE 442
S + L IG VIG+ G + +++Q +GA I + + + E
Sbjct: 265 ----------------SQEFLVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGE 308
Query: 443 R 443
R
Sbjct: 309 R 309
Score = 42.0 bits (97), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+T RL++P+S+ G ++G+ G I E+R T A ++V G D P S+E V + G
Sbjct: 124 VTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAG------DLLPNSTERAVTVSGV 177
Query: 540 SEHLI 544
+ +I
Sbjct: 178 PDAII 182
>gi|453088188|gb|EMF16228.1| KH domain RNA-binding protein [Mycosphaerella populorum SO2202]
Length = 369
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 76/337 (22%), Positives = 144/337 (42%), Gaps = 72/337 (21%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR++T + V+ +PG +RV+ + IA
Sbjct: 46 RAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSKVVPGVHDRVLTVTGILNGIA----- 100
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
DA V D +++ G+ +T RLL+ +N
Sbjct: 101 --------------------DAYGLVADCLVKGAPQMGIGGSVAAAPNTHPIRLLISHNQ 140
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I++++ +G +R++ + P +T+ +V++ G P+ ++A++E+
Sbjct: 141 MGTIIGRQGLKIKQIQDASG--VRMVAQKEMLP--QSTERIVEVQGTPDGIQKAVWEIGK 196
Query: 311 LLHQNPRKDKPPSSFPQAYGGQNFHSPP------APMADMHPLGNSSWPARNSSLHGMPS 364
L + ++ YG +SP AP A ++ G S + P
Sbjct: 197 CLVDDEQR---------GYG-TVLYSPSVRVGGGAPAAPLNGTGESRG-------YNAPR 239
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF----------------SMKILCSAGK 408
+ G G + SG+ S PP + G + I A
Sbjct: 240 SYNRTGNG---ADFTSGAPASYPPRRNGASEGGGGGSGPPPRVEEGEDIQTQNISIPADM 296
Query: 409 IGGVIGKGGFNVKQLQQETGASIHVEDAP-TDSDERV 444
+G +IG+GG + ++++ +GA I + AP D+ ER+
Sbjct: 297 VGCIIGRGGSKISEIRKSSGARISIAKAPHDDTGERM 333
Score = 42.0 bits (97), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 40/176 (22%), Positives = 86/176 (48%), Gaps = 12/176 (6%)
Query: 377 RMGSGSINSCPPGQMGEVS-AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVED 435
R+G+ ++ P E + ++ +++ + ++ + G +IGK G NV L+ +TG V
Sbjct: 21 RLGASNLQDDSPRTDDEYAQSQLTLRAIVTSKEAGVIIGKAGQNVADLRDKTGVRAGVSK 80
Query: 436 APTDSDERVIRASA-FEGLWNPRSQTIDAIL----QLQNKTSEFSEKGTITTRLLVPSSK 490
+RV+ + G+ + D ++ Q+ S + T RLL+ ++
Sbjct: 81 VVPGVHDRVLTVTGILNGIADAYGLVADCLVKGAPQMGIGGSVAAAPNTHPIRLLISHNQ 140
Query: 491 VGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
+G I+G+ G I ++ + + +R+V + L P S+E IV+++G+ + + A
Sbjct: 141 MGTIIGRQGLKIKQI--QDASGVRMVAQKEML----PQSTERIVEVQGTPDGIQKA 190
>gi|325093144|gb|EGC46454.1| KH domain RNA binding protein [Ajellomyces capsulatus H88]
Length = 499
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/364 (23%), Positives = 140/364 (38%), Gaps = 84/364 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S + IGK G V +R + AK TV+D G+ ER++ +
Sbjct: 140 RAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTV------------- 186
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
QDA+ K II + + ++ T RLL+P+ +
Sbjct: 187 ----------------SGMQDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLL 230
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS- 309
+G ++GK G I+ ++ +GA R+ +D P ++T+ + I G + A Y V+
Sbjct: 231 IGSIIGKSGVRIREIQEASGA--RLNASDSCLP--LSTERTLVILGVADAVHIATYYVAV 286
Query: 310 TLLHQNPRKDKPPSS-----------------------FPQAYGGQNFHSPPAPMADMHP 346
TL+ Q + P++ PQ GGQ H P P
Sbjct: 287 TLVEQLTERFGGPAASAYATRSGGAAGVVPGGMQVVPYVPQPAGGQYGH--PDTFKRHQP 344
Query: 347 LGN---SSWPARNSSLHGMPSTPWMG------GYGDQPSRMGSGSINSCPPGQ------- 390
GN S+ +HG P P M G +P G+G P G
Sbjct: 345 PGNRVVSTGGYGVPYVHGQPGQPQMPHQALHYGSSSRPGYSGAGPHQPAPYGAPQPAPVH 404
Query: 391 -------MGEV--SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD 441
G V A + +I +G +IGKGG + +++ +G+ I + + +S+
Sbjct: 405 GGPSAQPAGGVVPGAPVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSN 464
Query: 442 ERVI 445
ER++
Sbjct: 465 ERLV 468
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 16/147 (10%)
Query: 384 NSCPPGQMG--EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD 441
+S PP Q + S ++ + S+ + IGKGG NV Q+++ +GA V D +
Sbjct: 121 SSQPPSQHATQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAV 180
Query: 442 ERVIRASAFEGLWNPRSQTIDAILQLQN----KTSEFSEKGTITTRLLVPSSKVGCILGQ 497
ER++ S G+ + ++ I++ N + ++ T RLL+P +G I+G+
Sbjct: 181 ERILTVS---GMQDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGK 237
Query: 498 GGHVINEMRRRTQADIRVVGARVKLQD 524
G I E++ + GAR+ D
Sbjct: 238 SGVRIREIQEAS-------GARLNASD 257
Score = 43.1 bits (100), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 42/74 (56%), Gaps = 7/74 (9%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV-LPADRLPPCAMNTDEMVQISGKP 298
+T ++ +PN+MVG ++GK G I +R +G+ I++ P D + + +V I+G P
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDN------SNERLVTITGTP 474
Query: 299 NVAKRALYEVSTLL 312
+ ALY + + L
Sbjct: 475 ECNQMALYMLYSRL 488
Score = 42.4 bits (98), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 7/62 (11%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
+T ++ +P+ VG I+G+GG INE+R + G+ +K+ +P S+E +V I G+
Sbjct: 421 VTQQIFIPNDMVGAIIGKGGAKINEIR-------HLSGSVIKINEPQDNSNERLVTITGT 473
Query: 540 SE 541
E
Sbjct: 474 PE 475
>gi|119193374|ref|XP_001247293.1| hypothetical protein CIMG_01064 [Coccidioides immitis RS]
gi|303312121|ref|XP_003066072.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240105734|gb|EER23927.1| KH domain containing protein [Coccidioides posadasii C735 delta
SOWgp]
gi|320040053|gb|EFW21987.1| KH domain RNA binding protein [Coccidioides posadasii str.
Silveira]
gi|392863461|gb|EAS35786.2| KH domain RNA binding protein [Coccidioides immitis RS]
Length = 489
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 86/369 (23%), Positives = 143/369 (38%), Gaps = 96/369 (26%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S + IGK G V +R + AK TV+D G+ ER++ + S P
Sbjct: 136 RAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYTRGAVERILTV-SGP--------- 185
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
QDA+ K II + S ++ T RLL+P+ +
Sbjct: 186 -------------------QDAVAKAFGLIIRTLNNEPLDSPSTAQSKTYPLRLLIPHIL 226
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV-S 309
+G ++GK G I+ ++ +GA R+ +D P ++T+ + I G + A Y V +
Sbjct: 227 IGSIIGKSGVRIREIQEHSGA--RLNASDSCLP--LSTERSLVILGVADAVHIATYYVAA 282
Query: 310 TLLHQNPRKDKPPSS-----------------------FPQAYGGQNFHSPPAPMADMHP 346
TL+ Q + P++ PQ GGQ H P HP
Sbjct: 283 TLVEQLTERFGGPAASAYATRSGGPAGVVPGGMQVVPYVPQPAGGQYGH--PDSFKRHHP 340
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRM---------------GSGSINSCPPGQ- 390
N + S+ +G+ P+M G G P M G+G P G
Sbjct: 341 QANRAM----STGYGV---PYMHGPGPSPHGMQQPIHYNASPRQGYTGAGPHQPAPYGAP 393
Query: 391 ------------MGE--VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA 436
MG + +I +G +IGKGG + +++ +G+ I + +
Sbjct: 394 QPPHSHGTPAQPMGAPVAGGPLTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEP 453
Query: 437 PTDSDERVI 445
+S+ER++
Sbjct: 454 QDNSNERLV 462
Score = 45.8 bits (107), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 14/129 (10%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQ 459
++ + S+ + IGKGG NV Q+++ +GA V D + ER++ S G + ++
Sbjct: 135 IRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYTRGAVERILTVS---GPQDAVAK 191
Query: 460 TIDAILQLQNK----TSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
I++ N + ++ T RLL+P +G I+G+ G I E++ +
Sbjct: 192 AFGLIIRTLNNEPLDSPSTAQSKTYPLRLLIPHILIGSIIGKSGVRIREIQEHS------ 245
Query: 516 VGARVKLQD 524
GAR+ D
Sbjct: 246 -GARLNASD 253
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 7/64 (10%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIR 537
G +T ++ +P+ VG I+G+GG INE+R + G+ +K+ +P S+E +V I
Sbjct: 413 GPLTQQIFIPNDMVGAIIGKGGAKINEIR-------HLSGSVIKINEPQDNSNERLVTIT 465
Query: 538 GSSE 541
G+ E
Sbjct: 466 GTQE 469
>gi|351695446|gb|EHA98364.1| Far upstream element-binding protein 3 [Heterocephalus glaber]
Length = 490
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 71/331 (21%), Positives = 130/331 (39%), Gaps = 86/331 (25%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKI 184
+T+ IL P+ K+G VIGK G +K L+E T K+ + +P ++ + I P K+
Sbjct: 149 NTIQEILIPASKVGLVIGKGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDPFKV 208
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL--FGGMASDDDNENSTITA 242
+ A++ +L++ I E+D F G+ D + +
Sbjct: 209 QQ----------------------AREMVLEI---IREKDQADFRGVRGDFSSRLGGGSI 243
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
+ VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P+ +
Sbjct: 244 EVSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGVSP-----ERAAQVMGPPDRCQ 298
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
A + ++ L+ +D +GG AR G
Sbjct: 299 HAAHIINELILTAQERD--------GFGGLAV-------------------ARG---RGR 328
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
W MG + A K G VIGKGG N+K
Sbjct: 329 SRGDW----------------------NMGTAGGVQEITYTVPADKCGLVIGKGGENIKS 366
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGL 453
+ Q++GA + ++ P + + +R G+
Sbjct: 367 INQQSGAHVELQRNPPPNTDPSLRIFTIRGV 397
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 91/431 (21%), Positives = 161/431 (37%), Gaps = 123/431 (28%)
Query: 135 PSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDDS 194
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P
Sbjct: 72 PDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTP------------- 118
Query: 195 AAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCL 254
ES+E A+ L ++ DR F +D + N+TI +L+P + VG +
Sbjct: 119 ------ESIE---QAKRLLGQIVDRCRNGPGF----HNDVDGNNTIQ-EILIPASKVGLV 164
Query: 255 LGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+GK G+ I++L+ TG + ++ LP A D+ ++I+G P ++A V ++ +
Sbjct: 165 IGKGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDPFKVQQAREMVLEIIRE 221
Query: 315 NPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQ 374
+ D + G GD
Sbjct: 222 KDQAD-----------------------------------------------FRGVRGDF 234
Query: 375 PSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE 434
SR+G GSI P F++ I VIG+ G +K++Q + G I +
Sbjct: 235 SSRLGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQFK 277
Query: 435 DAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF-------------------S 475
S ER + + I+ ++ + F +
Sbjct: 278 PDDGVSPERAAQVMGPPDRCQHAAHIINELILTAQERDGFGGLAVARGRGRSRGDWNMGT 337
Query: 476 EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQD---PHPGSSEC 532
G VP+ K G ++G+GG I + +++ GA V+LQ P+ S
Sbjct: 338 AGGVQEITYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPNTDPSLR 390
Query: 533 IVDIRGSSEHL 543
I IRG + +
Sbjct: 391 IFTIRGVPQQI 401
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 67/148 (45%), Gaps = 7/148 (4%)
Query: 366 PWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQ 425
P + GYG Q + G N G + A + + +G +IG+GG + ++Q
Sbjct: 35 PSVYGYGVQKRPLDDGVGNQL--GALVHQRAVITEEFKVPDKMVGFIIGRGGEQISRIQA 92
Query: 426 ETGASIHVEDAPTDSDER--VIRAS--AFEGLWNPRSQTIDAILQLQNKTSEFSEKGTIT 481
E+G I + + ER V+ + + E Q +D ++ TI
Sbjct: 93 ESGCKIQIASESSGIPERPCVLTGTPESIEQAKRLLGQIVDRCRNGPGFHNDVDGNNTI- 151
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRT 509
+L+P+SKVG ++G+GG I +++ RT
Sbjct: 152 QEILIPASKVGLVIGKGGETIKQLQERT 179
>gi|390604812|gb|EIN14203.1| hypothetical protein PUNSTDRAFT_95868 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 330
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 78/335 (23%), Positives = 139/335 (41%), Gaps = 75/335 (22%)
Query: 116 REQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVI 175
R +S + P R L ++ G +IGK G V LR++T K V+ +PG +RV+
Sbjct: 16 RSRSGSPAGPDTLTLRALVSTKDAGVIIGKGGKNVADLRDQTGVKAGVSKVVPGVHDRVL 75
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN 235
I S ++AK + I+ + + S
Sbjct: 76 TISGSVDRVAK-----------------------------AYGLIVAQLVASNPTSPISA 106
Query: 236 ENSTITA-RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
+ST T+ RLL+ +N++G ++G+ G I+ ++ +GA + V D LP +T+ +V++
Sbjct: 107 SSSTHTSLRLLISHNLMGTIIGRGGTRIKAIQDNSGARM-VASKDMLP---QSTERVVEV 162
Query: 295 SGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPA 354
G +RA+ ++ L ++ + + G FH P A G+S +
Sbjct: 163 HGSVEAIERAVDDIGKSLLED---------WERGLGTVLFH----PGAGDERSGSSRRYS 209
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEF----------SMKILC 404
N G YG SR +G PG G S + + I
Sbjct: 210 EN-----------RGSYGG--SRQSNGR-----PGSPGSPSRQAPSSPQPTNLRTQNISI 251
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD 439
+ +G +IG+GG + ++++ +G+ I + AP D
Sbjct: 252 PSDMVGCIIGRGGSKITEIRRLSGSKISIAKAPHD 286
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 69/149 (46%), Gaps = 10/149 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPR 457
+++ L S G +IGKGG NV L+ +TG V +RV+ S
Sbjct: 28 LTLRALVSTKDAGVIIGKGGKNVADLRDQTGVKAGVSKVVPGVHDRVLTISGSVDRVAKA 87
Query: 458 SQTIDAILQLQNKTSEFSEKGTITT--RLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
I A L N TS S + T RLL+ + +G I+G+GG I ++ +
Sbjct: 88 YGLIVAQLVASNPTSPISASSSTHTSLRLLISHNLMGTIIGRGGTRIKAIQDNS------ 141
Query: 516 VGAR-VKLQDPHPGSSECIVDIRGSSEHL 543
GAR V +D P S+E +V++ GS E +
Sbjct: 142 -GARMVASKDMLPQSTERVVEVHGSVEAI 169
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 85/200 (42%), Gaps = 25/200 (12%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYSSPTKIAK 186
T R+L +G +IG+ G +K++++ + A++ + D +P S ERV+ ++ S I +
Sbjct: 112 TSLRLLISHNLMGTIIGRGGTRIKAIQDNSGARMVASKDMLPQSTERVVEVHGSVEAIER 171
Query: 187 TQNKDDDSAAETKKESMEP---HCAAQDALLKVHDRIIE-EDLFGGMASDDDNENS---- 238
+ S E + + H A D R E +GG + S
Sbjct: 172 AVDDIGKSLLEDWERGLGTVLFHPGAGDERSGSSRRYSENRGSYGGSRQSNGRPGSPGSP 231
Query: 239 ------------TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
T + +P++MVGC++G+ G I +R +G+ I + A P
Sbjct: 232 SRQAPSSPQPTNLRTQNISIPSDMVGCIIGRGGSKITEIRRLSGSKISIAKA----PHDE 287
Query: 287 NTDEMVQISGKPNVAKRALY 306
+ M I G P ++AL+
Sbjct: 288 TGERMFTIVGTPEANEKALF 307
>gi|154281643|ref|XP_001541634.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150411813|gb|EDN07201.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 482
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/369 (22%), Positives = 141/369 (38%), Gaps = 84/369 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S + IGK G V +R + AK TV+D G+ ER++ +
Sbjct: 140 RAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAVERILTV------------- 186
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
QDA+ K II + + ++ T RLL+P+ +
Sbjct: 187 ----------------SGMQDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLL 230
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS- 309
+G ++GK G I+ ++ +GA R+ +D P ++T+ + I G + A Y V+
Sbjct: 231 IGSIIGKSGVRIREIQEASGA--RLNASDSCLP--LSTERTLVILGVADAVHIATYYVAV 286
Query: 310 TLLHQNPRKDKPPSS-----------------------FPQAYGGQNFHSPPAPMADMHP 346
TL+ Q + P++ PQ GGQ H P P
Sbjct: 287 TLVEQLTERFGGPAASAYATRSGGAAGVVPGGMQVVPYVPQPAGGQYGH--PDTFKRHQP 344
Query: 347 LGN---SSWPARNSSLHGMPSTPWMG------GYGDQPSRMGSGSINSCPPGQ------- 390
GN S+ +HG P P M G +P G+G P G
Sbjct: 345 PGNRVVSTGGYGVPYVHGQPGQPQMPHQALHYGSSSRPGYSGAGPHQPAPYGAPQPAPVH 404
Query: 391 -------MGEV--SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD 441
G V A + +I +G +IGKGG + +++ +G+ I + + +S+
Sbjct: 405 GGPSAQPAGGVVPGAPVTQQIFIPNDMVGAIIGKGGAKINEIRHLSGSVIKINEPQDNSN 464
Query: 442 ERVIRASAF 450
ER++ +
Sbjct: 465 ERLVTITVL 473
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 16/147 (10%)
Query: 384 NSCPPGQMG--EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD 441
+S PP Q + S ++ + S+ + IGKGG NV Q+++ +GA V D +
Sbjct: 121 SSQPPSQHATQDESGWIHIRAVISSAEAATCIGKGGENVSQIRRLSGAKCTVSDYSRGAV 180
Query: 442 ERVIRASAFEGLWNPRSQTIDAILQLQN----KTSEFSEKGTITTRLLVPSSKVGCILGQ 497
ER++ S G+ + ++ I++ N + ++ T RLL+P +G I+G+
Sbjct: 181 ERILTVS---GMQDAVAKAFGLIIRTLNNEPLEAPSTAQSKTYPLRLLIPHLLIGSIIGK 237
Query: 498 GGHVINEMRRRTQADIRVVGARVKLQD 524
G I E++ + GAR+ D
Sbjct: 238 SGVRIREIQEAS-------GARLNASD 257
>gi|326378263|gb|ADZ57231.1| neuro-oncological ventral antigen [Branchiostoma floridae]
Length = 511
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 107/248 (43%), Gaps = 35/248 (14%)
Query: 113 NSSREQSFGNSQPAD--TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTI 167
NS R G P D + ++L PS G +IGK G + L++ET A I ++ D
Sbjct: 49 NSKRSNFGGEGGPEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFY 108
Query: 168 PGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
PG+ ER+++I S +DS K ME A K
Sbjct: 109 PGTTERIVVITGS-----------EDSLKSVHKFLMEKISQAPQPPAKSPSE-------- 149
Query: 228 GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMN 287
+ N N +++VPN+ G ++GK G I+ + +TG+ +++ + +N
Sbjct: 150 ----QNANNNRAKQVKIVVPNSTAGLIIGKGGATIKFIMEQTGSRVQI---SQKATNGIN 202
Query: 288 TDE-MVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPP--APMAD- 343
E ++ I+G+P +A + + ++P+ P+ Y G ++ P +P A
Sbjct: 203 LPERVITITGEPEQNDKACAFIVNKIVEDPQSGSCPNISYATYTGPVANANPTGSPYASP 262
Query: 344 MHPLGNSS 351
M PL N S
Sbjct: 263 MSPLQNGS 270
Score = 48.9 bits (115), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 70/141 (49%), Gaps = 18/141 (12%)
Query: 389 GQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDA----PTDSDERV 444
G+ G + +K+L + G +IGKGG + QLQ+ETGA+I + + P ++ V
Sbjct: 57 GEGGPEDGQLLLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSNDFYPGTTERIV 116
Query: 445 IRASAFEGLWNPRSQTIDAILQL----------QNKTSEFSEKGTITTRLLVPSSKVGCI 494
+ + + L + ++ I Q QN + +++ +++VP+S G I
Sbjct: 117 VITGSEDSLKSVHKFLMEKISQAPQPPAKSPSEQNANNNRAKQ----VKIVVPNSTAGLI 172
Query: 495 LGQGGHVINEMRRRTQADIRV 515
+G+GG I + +T + +++
Sbjct: 173 IGKGGATIKFIMEQTGSRVQI 193
>gi|119583080|gb|EAW62676.1| heterogeneous nuclear ribonucleoprotein K, isoform CRA_b [Homo
sapiens]
Length = 462
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 117 EQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
EQ+F S+ D + RIL S+ G VIGK G +K+LR + A ++V D+ ER+
Sbjct: 30 EQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERI 87
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDD 233
+ I + I + K T +E ++ P A L D + + SD
Sbjct: 88 LSISADIETIGEILKK----IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF 143
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
D E RLL+ ++ G ++G +G I+ LR T I++ C +TD +V
Sbjct: 144 DCE-----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVL 194
Query: 294 ISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAY 329
I GKP+ + + L+ ++P K + P Y
Sbjct: 195 IGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFY 230
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA---------- 449
++IL + G VIGKGG N+K L+ + AS+ V D + ER++ SA
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPD--SSGPERILSISADIETIGEILK 102
Query: 450 ------FEGLWNP----------RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGC 493
EGL P S ++ + K S+F RLL+ S G
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD----CELRLLIHQSLAGG 158
Query: 494 ILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I+G G I E+R TQ I++ Q+ P S++ +V I G + ++
Sbjct: 159 IIGVKGAKIKELRENTQTTIKL------FQECCPHSTDRVVLIGGKPDRVV 203
Score = 44.3 bits (103), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 40/79 (50%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
N+S + S+G+ ++ P G +IGK G +K +R E+ A I + + + G
Sbjct: 369 NYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 428
Query: 170 SEERVIIIYSSPTKIAKTQ 188
SE+R+I I + +I Q
Sbjct: 429 SEDRIITITGTQDQIQNAQ 447
Score = 42.7 bits (99), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GG S D IT ++ +P ++ G ++GK G I+++R E+GA+I++ P
Sbjct: 374 GGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEG 428
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+ D ++ I+G + + A Y + + Q
Sbjct: 429 SEDRIITITGTQDQIQNAQYLLQNSVKQ 456
Score = 42.7 bits (99), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
ITT++ +P G I+G+GG I ++R + GA +K+ +P GS + I+ I G+
Sbjct: 387 ITTQVTIPKDLAGSIIGKGGQRIKQIRHES-------GASIKIDEPLEGSEDRIITITGT 439
Query: 540 SEHLISAHGTYQS 552
+ + +A Q+
Sbjct: 440 QDQIQNAQYLLQN 452
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGKGG +KQ++ E+GASI +++ S++R+I + + Q +A LQN
Sbjct: 399 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQN 452
Query: 470 KTSEFSEK 477
++S K
Sbjct: 453 SVKQYSGK 460
>gi|389630232|ref|XP_003712769.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|351645101|gb|EHA52962.1| hypothetical protein MGG_16887 [Magnaporthe oryzae 70-15]
gi|440469705|gb|ELQ38806.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae Y34]
gi|440482607|gb|ELQ63080.1| Poly(rC)-binding protein 3 [Magnaporthe oryzae P131]
Length = 370
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 132/319 (41%), Gaps = 38/319 (11%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
A R + S++ G +IGK G V LR+ET K V+ + G +RV+ I I+
Sbjct: 44 AQLTVRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCEGIS 103
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
K + ALL+ + GG+ S+ N T +LL
Sbjct: 104 KA------------------YAVVARALLEGAPSM----GMGGVVSN----NGTHPIKLL 137
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+ +N +G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P +RA+
Sbjct: 138 ISHNQMGTIIGRQGLKIKHIQDVSG--VRMVAQKEMLP--QSTERVVEVQGTPEGIQRAV 193
Query: 306 YEVSTLLHQNPRKDKP-----PSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLH 360
+E+ L + ++ P Q G S A + + + +
Sbjct: 194 WEICKCLIDDWQRGTGTVLYNPVVRTQPAGATQMGSSGAGYGTSN---RGDYSSSRVTRT 250
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNV 420
G + GG R S + N PP + I A +G +IG+ G +
Sbjct: 251 GNGADFSNGGGRSYNRRSDSDAANRGPPTHDENGEEIQTQNISIPADMVGCIIGRAGSKI 310
Query: 421 KQLQQETGASIHVEDAPTD 439
++++ +GA I + AP D
Sbjct: 311 SEIRKTSGARISIAKAPHD 329
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 10/152 (6%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLW 454
A+ +++ + S+ + G +IGKGG NV L+ ETG V +RV+ + EG+
Sbjct: 44 AQLTVRAIVSSKEAGVIIGKGGKNVADLRDETGVKAGVSKVVQGVHDRVLTITGGCEGIS 103
Query: 455 NPRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQA 511
+ A+L+ S GT +LL+ +++G I+G+ G I + + +
Sbjct: 104 KAYAVVARALLEGAPSMGMGGVVSNNGTHPIKLLISHNQMGTIIGRQGLKIKHI--QDVS 161
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+R+V + L P S+E +V+++G+ E +
Sbjct: 162 GVRMVAQKEML----PQSTERVVEVQGTPEGI 189
Score = 42.7 bits (99), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
D+N T + +P +MVGC++G+ G I +R +GA I + A P + M
Sbjct: 281 DENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA----PHDETGERMF 336
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKDK 320
I G + AL+ LL++N +K
Sbjct: 337 TIMGSAKANETALF----LLYENLEAEK 360
>gi|157115059|ref|XP_001652540.1| far upstream (fuse) binding protein [Aedes aegypti]
gi|157115061|ref|XP_001652541.1| far upstream (fuse) binding protein [Aedes aegypti]
gi|108877074|gb|EAT41299.1| AAEL007042-PA [Aedes aegypti]
gi|108877075|gb|EAT41300.1| AAEL007042-PB [Aedes aegypti]
Length = 706
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 71/156 (45%), Gaps = 32/156 (20%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE-ERVIIIYSSPTKIAKTQNK 190
I+ P K+G +IGK G +K L+E++ AK+ + PG E E+ + I P K+
Sbjct: 162 IMIPGSKVGLIIGKGGETIKQLQEKSGAKMVIIQDGPGQEMEKPLRISGDPQKV------ 215
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
+ A V D I E+D + N T A + VP +
Sbjct: 216 -------------------EHAKQLVFDLIQEKDNYNAQRQQQAPMNGTEQAEVFVPKSA 256
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVL------PADR 280
VG ++GK GD+I++++ ++G ++ + P DR
Sbjct: 257 VGVVIGKGGDMIKKIQGDSGCKLQFIQGRGDGPGDR 292
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 73/140 (52%), Gaps = 10/140 (7%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGAS-IHVEDAPTDSDERVIRASAF-EGLWNPRS 458
+I+ K+G +IGKGG +KQLQ+++GA + ++D P E+ +R S + + + +
Sbjct: 161 EIMIPGSKVGLIIGKGGETIKQLQEKSGAKMVIIQDGPGQEMEKPLRISGDPQKVEHAKQ 220
Query: 459 QTIDAILQLQNKTSEFSEK----GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIR 514
D I + N ++ ++ GT + VP S VG ++G+GG +I +++ + ++
Sbjct: 221 LVFDLIQEKDNYNAQRQQQAPMNGTEQAEVFVPKSAVGVVIGKGGDMIKKIQGDSGCKLQ 280
Query: 515 VVGARVKLQDPHPGSSECIV 534
+ R PG CIV
Sbjct: 281 FIQGR----GDGPGDRRCIV 296
>gi|426256848|ref|XP_004022049.1| PREDICTED: heterogeneous nuclear ribonucleoprotein K-like isoform 2
[Ovis aries]
Length = 466
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 117 EQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
EQ+F S+ D + RIL S+ G VIGK G +K+LR + A ++V D+ ER+
Sbjct: 30 EQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERI 87
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDD 233
+ I + I + K T +E ++ P A L D + + SD
Sbjct: 88 LSISADIETIGEILKK----IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF 143
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
D E RLL+ ++ G ++G +G I+ LR T I++ C +TD +V
Sbjct: 144 DCE-----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPQSTDRVVL 194
Query: 294 ISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAY 329
I GKP+ + + L+ ++P K + P Y
Sbjct: 195 IGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFY 230
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA---------- 449
++IL + G VIGKGG N+K L+ + AS+ V D + ER++ SA
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPD--SSGPERILSISADIETIGEILK 102
Query: 450 ------FEGLWNP----------RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGC 493
EGL P S ++ + K S+F RLL+ S G
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD----CELRLLIHQSLAGG 158
Query: 494 ILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I+G G I E+R TQ I++ Q+ P S++ +V I G + ++
Sbjct: 159 IIGVKGAKIKELRENTQTTIKL------FQECCPQSTDRVVLIGGKPDRVV 203
Score = 42.7 bits (99), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 45/93 (48%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
++S + S+G+ ++ P G +IGK G +K +R E+ A I + + + G
Sbjct: 370 DYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKES 202
SE+R+I I + +I Q +S K+ S
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVKHVKQYS 462
Score = 42.7 bits (99), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
ITT++ +P G I+G+GG I ++R + GA +K+ +P GS + I+ I G+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHES-------GASIKIDEPLEGSEDRIITITGT 440
Query: 540 SEHLISAHGTYQS 552
+ + +A Q+
Sbjct: 441 QDQIQNAQYLLQN 453
Score = 42.0 bits (97), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GG S D IT ++ +P ++ G ++GK G I+++R E+GA+I++ P
Sbjct: 375 GGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEG 429
Query: 287 NTDEMVQISGKPNVAKRALY 306
+ D ++ I+G + + A Y
Sbjct: 430 SEDRIITITGTQDQIQNAQY 449
>gi|405977635|gb|EKC42074.1| Poly(rC)-binding protein 3 [Crassostrea gigas]
Length = 439
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 76/146 (52%), Gaps = 8/146 (5%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPR 457
+++++ ++G +IGK G N+K+ ++++GA I++ D ER++ + +
Sbjct: 12 LTVRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISDG--SCPERIVTVTGTTECIHKA 69
Query: 458 SQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
I + + + K +T RL+VP+S+ G ++G+GG I E+R T A I+V
Sbjct: 70 FTMICKKFEEDLQNTPTVPKPPVTLRLVVPASQCGSLIGKGGSKIKEIRETTGASIQVAS 129
Query: 518 ARVKLQDPHPGSSECIVDIRGSSEHL 543
+ P S+E V + G+++ +
Sbjct: 130 EML------PNSTERAVTVSGTADAI 149
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 51/219 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R++ +++G +IGK G+ +K RE++ AKI ++D GS ER++ + + I K
Sbjct: 14 VRMIMQGKEVGSIIGKKGDNIKKFREDSGAKINISD---GSCPERIVTVTGTTECIHK-- 68
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
A + + EEDL + +T RL+VP
Sbjct: 69 -----------------------AFTMICKKF-EEDL----QNTPTVPKPPVTLRLVVPA 100
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA+I+V ++ LP +T+ V +SG + + +
Sbjct: 101 SQCGSLIGKGGSKIKEIRETTGASIQV-ASEMLP---NSTERAVTVSGTADAITLCIQNI 156
Query: 309 STLLHQNPRKDK----------PPSSFPQAYGGQNFHSP 337
+++ ++P K PP F GGQ + P
Sbjct: 157 CSIMLESPPKGATIQYRPKPVVPPVIF---AGGQAYTVP 192
Score = 47.8 bits (112), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 52/98 (53%), Gaps = 8/98 (8%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEH 542
+ +P+ +GCI+G+GG INE+R+ + GA +K+ + G+ + V I G+ E
Sbjct: 273 EMAIPNDLIGCIIGRGGQKINEIRQMS-------GAMIKISNAEEGAPDRKVTITGTPET 325
Query: 543 LISAHGTYQSFMTSGQSMKVQP-SSYQNINPQQSSCQT 579
+ A + M +++ + P SS QN P +S Q+
Sbjct: 326 IGLAQYLINTSMELHKTLTLDPSSSTQNTTPTLTSVQS 363
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 49/102 (48%), Gaps = 10/102 (9%)
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
+ +PN+++GC++G+ G I +R +GA I++ A+ P D V I+G P
Sbjct: 273 EMAIPNDLIGCIIGRGGQKINEIRQMSGAMIKISNAEEGAP-----DRKVTITGTPETIG 327
Query: 303 RALYEVSTLLHQNPRKDKPPSS-----FPQAYGGQNFHSPPA 339
A Y ++T + + PSS P Q+ H+P A
Sbjct: 328 LAQYLINTSMELHKTLTLDPSSSTQNTTPTLTSVQSQHAPMA 369
>gi|358400710|gb|EHK50036.1| hypothetical protein TRIATDRAFT_51252 [Trichoderma atroviride IMI
206040]
Length = 477
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 84/367 (22%), Positives = 143/367 (38%), Gaps = 80/367 (21%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S + +IGK G V ++R+ + AK TV+D G+ ER++ +
Sbjct: 121 RAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTV------------- 167
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
DA+ K II ++ + T RLL+P+ +
Sbjct: 168 ----------------SGIVDAVAKAFGLIIRTLNNEPLSEASTASSKTYPLRLLIPHIL 211
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV-S 309
+G ++GK G I+ ++ +GA R+ +D P M+++ + + G + A Y V S
Sbjct: 212 IGSIIGKGGSRIREIQEASGA--RLNASDSCLP--MSSERSLVVMGVADAVHIATYYVGS 267
Query: 310 TLLHQ-NPRKDKPPSSFPQAYGGQNFHSPPAPMADM----HPLGNSSWPARN-------- 356
TLL Q N R P +S G S P M + P A N
Sbjct: 268 TLLEQLNERFGGPGASAYATRSGAPVGSIPGGMQVVPYSPQPASGHYGRAENYGRHQERR 327
Query: 357 ---------------SSLHGMPSTPWMGGYGDQPSRMGSGS--------------INSCP 387
+ HG P+ P G G QP+ G+ + + P
Sbjct: 328 PHHMPPAPYPQPYAHGAPHGAPAIPMQYGAG-QPAAYGAAAPHVQPHMAPHTGPQAHGAP 386
Query: 388 PGQ---MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERV 444
GQ G + +I +G +IGKGG + +++Q +G+ I + + +S+ER+
Sbjct: 387 QGQPMHAGMPGGPITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDNSNERL 446
Query: 445 IRASAFE 451
+ + E
Sbjct: 447 VTITGTE 453
Score = 46.6 bits (109), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 66/135 (48%), Gaps = 16/135 (11%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLW 454
S+ ++ + S+ + +IGKGG NV +++ + A V D + ER++ S G+
Sbjct: 115 SSWIHIRAVISSPEAATIIGKGGENVSNIRKMSNAKCTVSDYQKGAVERILTVS---GIV 171
Query: 455 NPRSQTIDAILQLQNKTSEFSEKGTITT-----RLLVPSSKVGCILGQGGHVINEMRRRT 509
+ ++ I++ N SE T ++ RLL+P +G I+G+GG I E++ +
Sbjct: 172 DAVAKAFGLIIRTLNN-EPLSEASTASSKTYPLRLLIPHILIGSIIGKGGSRIREIQEAS 230
Query: 510 QADIRVVGARVKLQD 524
GAR+ D
Sbjct: 231 -------GARLNASD 238
Score = 45.8 bits (107), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 39/64 (60%), Gaps = 7/64 (10%)
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIR 537
G IT ++ +P+ VG I+G+GG INE+R+ + G+ +K+ +P S+E +V I
Sbjct: 398 GPITQQIYIPNDMVGAIIGKGGQKINEIRQMS-------GSVIKINEPQDNSNERLVTIT 450
Query: 538 GSSE 541
G+ E
Sbjct: 451 GTEE 454
Score = 41.2 bits (95), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 41/74 (55%), Gaps = 7/74 (9%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV-LPADRLPPCAMNTDEMVQISGKP 298
IT ++ +PN+MVG ++GK G I +R +G+ I++ P D + + +V I+G
Sbjct: 400 ITQQIYIPNDMVGAIIGKGGQKINEIRQMSGSVIKINEPQDN------SNERLVTITGTE 453
Query: 299 NVAKRALYEVSTLL 312
+ ALY + + L
Sbjct: 454 ECNRMALYMLYSRL 467
>gi|32564028|ref|NP_491825.2| Protein F26B1.2, isoform c [Caenorhabditis elegans]
gi|373218907|emb|CCD64193.1| Protein F26B1.2, isoform c [Caenorhabditis elegans]
Length = 380
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 17/151 (11%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
+F +++L S+ G +IGKGG N+K+L+ E A + V D +++ ERV +A E
Sbjct: 31 GKFEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVTADE---- 84
Query: 456 PRSQTIDAILQ--LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+T+ IL+ L FSE+ R+LV S G ++G+ G I E+R + A +
Sbjct: 85 ---KTVLNILKDVLPRLEDNFSERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARL 141
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
++ PGS++ ++ G ++++
Sbjct: 142 KI------FTGCAPGSTDRVLITSGEQKNVL 166
Score = 38.9 bits (89), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 11/83 (13%)
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP--CAMNTDEMVQIS----- 295
RLLV + G ++GK G+ I+RLR+E A+++V P P C + DE ++
Sbjct: 36 RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQV-PDSNTPERVCTVTADEKTVLNILKDV 94
Query: 296 ---GKPNVAKRALYEVSTLLHQN 315
+ N ++R EV L+HQ+
Sbjct: 95 LPRLEDNFSERDPCEVRMLVHQS 117
>gi|171686672|ref|XP_001908277.1| hypothetical protein [Podospora anserina S mat+]
gi|170943297|emb|CAP68950.1| unnamed protein product [Podospora anserina S mat+]
Length = 386
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/339 (22%), Positives = 136/339 (40%), Gaps = 77/339 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R + S++ G +IGKAG V LR+ET K V+ +PG +RV+ I I+K
Sbjct: 61 RAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVYDRVLTITGGCEAISK---- 116
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNM 250
A KV ++E GM N T +LL+ +N
Sbjct: 117 ---------------------AYAKVASALMEGAPAMGMGGVV-AANGTHPIKLLISHNQ 154
Query: 251 VGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVST 310
+G ++G++G I+ ++ +G +R++ + P +T+ +V++ G P +RA +E+
Sbjct: 155 MGTVIGRQGLKIKHIQDVSG--VRMVAQKEMLP--QSTERVVEVQGTPEGIQRATWEICK 210
Query: 311 LLHQNPRKDK---------------------PPSSFPQA---YGGQNFHSPPAPMADMHP 346
L + ++ + SS+PQ YGG + + AD
Sbjct: 211 CLVDDWQRGQGTVLYNPVVRTGTGAGAPAMGGASSYPQERAPYGGSSRVTRTGNGADFSN 270
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
G + R+ S P G++ + I A
Sbjct: 271 GGPRQYNRRSDSDAAQRGPPTHDENGEEIQ----------------------TQNISIPA 308
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAP-TDSDERV 444
+G +IG+ G + ++++ +GA I + AP D+ ER+
Sbjct: 309 DMVGCIIGRAGSKISEIRKTSGARISIAKAPHDDTGERM 347
Score = 43.9 bits (102), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 42/88 (47%), Gaps = 8/88 (9%)
Query: 233 DDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV 292
D+N T + +P +MVGC++G+ G I +R +GA I + A P + M
Sbjct: 293 DENGEEIQTQNISIPADMVGCIIGRAGSKISEIRKTSGARISIAKA----PHDDTGERMF 348
Query: 293 QISGKPNVAKRALYEVSTLLHQNPRKDK 320
I G + ALY LL++N +K
Sbjct: 349 TIMGSAKANETALY----LLYENLEAEK 372
Score = 42.7 bits (99), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 74/151 (49%), Gaps = 10/151 (6%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRAS-AFEGLWN 455
+ +++ + S+ + G +IGK G NV L+ ETG V +RV+ + E +
Sbjct: 57 QMTLRAIVSSKEAGVIIGKAGKNVADLRDETGVKAGVSKVVPGVYDRVLTITGGCEAISK 116
Query: 456 PRSQTIDAILQ---LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
++ A+++ + GT +LL+ +++G ++G+ G I + + +
Sbjct: 117 AYAKVASALMEGAPAMGMGGVVAANGTHPIKLLISHNQMGTVIGRQGLKIKHI--QDVSG 174
Query: 513 IRVVGARVKLQDPHPGSSECIVDIRGSSEHL 543
+R+V + L P S+E +V+++G+ E +
Sbjct: 175 VRMVAQKEML----PQSTERVVEVQGTPEGI 201
>gi|25144314|ref|NP_740869.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
gi|373218905|emb|CCD64191.1| Protein F26B1.2, isoform a [Caenorhabditis elegans]
Length = 397
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 78/151 (51%), Gaps = 17/151 (11%)
Query: 396 AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWN 455
+F +++L S+ G +IGKGG N+K+L+ E A + V D +++ ERV +A E
Sbjct: 48 GKFEVRLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQVPD--SNTPERVCTVTADE---- 101
Query: 456 PRSQTIDAILQ--LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+T+ IL+ L FSE+ R+LV S G ++G+ G I E+R + A +
Sbjct: 102 ---KTVLNILKDVLPRLEDNFSERDPCEVRMLVHQSHAGALIGRNGSKIKELREKCSARL 158
Query: 514 RVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
++ PGS++ ++ G ++++
Sbjct: 159 KI------FTGCAPGSTDRVLITSGEQKNVL 183
Score = 38.9 bits (89), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 44/83 (53%), Gaps = 11/83 (13%)
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP--CAMNTDEMVQIS----- 295
RLLV + G ++GK G+ I+RLR+E A+++V P P C + DE ++
Sbjct: 53 RLLVSSKSAGAIIGKGGENIKRLRAEFNAHVQV-PDSNTPERVCTVTADEKTVLNILKDV 111
Query: 296 ---GKPNVAKRALYEVSTLLHQN 315
+ N ++R EV L+HQ+
Sbjct: 112 LPRLEDNFSERDPCEVRMLVHQS 134
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.131 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,589,603,543
Number of Sequences: 23463169
Number of extensions: 459467699
Number of successful extensions: 1342667
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1298
Number of HSP's successfully gapped in prelim test: 1849
Number of HSP's that attempted gapping in prelim test: 1314094
Number of HSP's gapped (non-prelim): 20947
length of query: 650
length of database: 8,064,228,071
effective HSP length: 149
effective length of query: 501
effective length of database: 8,863,183,186
effective search space: 4440454776186
effective search space used: 4440454776186
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 80 (35.4 bits)