BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046946
(650 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P58223|Y4837_ARATH KH domain-containing protein At4g18375 OS=Arabidopsis thaliana
GN=At4g18375 PE=2 SV=1
Length = 606
Score = 201 bits (512), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 144/410 (35%), Positives = 214/410 (52%), Gaps = 41/410 (10%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKT 187
VYRILCP +GGVIGK+G ++ ++R T+AKI V D + G +RVI IY S
Sbjct: 36 VVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSV------ 89
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
+ + TK E+ EP C AQDALLKV+D I+ D ++ D +++ RLLVP
Sbjct: 90 -KEKQEEIGFTKSEN-EPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNK-ECRLLVP 146
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP---CAMNTDEMVQISGKPNVAKRA 304
+ L+GK G+ I+R+R T A+++V+ D P CAM D +V ISG+P K+A
Sbjct: 147 FSQSSSLIGKAGENIKRIRRRTRASVKVVSKDVSDPSHVCAMEYDNVVVISGEPESVKQA 206
Query: 305 LYEVSTLLHQ-NPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWP---------- 353
L+ VS ++++ NPR++ P S Q P A + L NS +P
Sbjct: 207 LFAVSAIMYKINPRENIPLDSTSQDV-------PAASVIVPSDLSNSVYPQTGFYSNQDH 259
Query: 354 -----ARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPP--GQMGEV-SAEFSMKILCS 405
A S S GY + + +S P G G S E K+LC
Sbjct: 260 ILQQGAGVPSYFNALSVSDFQGYAETAANPVPVFASSLPVTHGFGGSSRSEELVFKVLCP 319
Query: 406 AGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTD--SDERVIRASAFEGLWNPRSQTIDA 463
I VIGKGG +K++++ +G+ I V D+ T DE VI +A E + +S ++A
Sbjct: 320 LCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVTATESPDDMKSMAVEA 379
Query: 464 ILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+L LQ ++ + + +LLV S +GC++G+ G VINE+R+RT A+I
Sbjct: 380 VLLLQEYIND-EDAENVKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANI 428
Score = 107 bits (266), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/322 (28%), Positives = 157/322 (48%), Gaps = 54/322 (16%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVAD--TIPGSEERVIIIY 178
G+S+ + V+++LCP I VIGK G+ +K +RE + + I V D T G +E VII+
Sbjct: 305 GSSRSEELVFKVLCPLCNIMRVIGKGGSTIKRIREASGSCIEVNDSRTKCGDDECVIIVT 364
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+ T++ DD +SM A +A+L + + I +D+D EN
Sbjct: 365 A-------TESPDD-------MKSM-----AVEAVLLLQEYI----------NDEDAEN- 394
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
+ +LLV + ++GC++GK G VI +R T ANI + + D++V++SG+
Sbjct: 395 -VKMQLLVSSKVIGCVIGKSGSVINEIRKRTNANICISKGKK--------DDLVEVSGEV 445
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARN-- 356
+ + AL ++ L ++ DK + + PPA + L SS
Sbjct: 446 SSVRDALIQIVLRLREDVLGDKDSVATRK---------PPARTDNCSFLSGSSNAGYTLP 496
Query: 357 SSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKG 416
S + M ST GYG P+ G + S P G + + +++IL A + V+GKG
Sbjct: 497 SFMSSMASTSGFHGYGSFPA--GDNVLGSTGPYSYGRLPSSSALEILIPAHAMSKVMGKG 554
Query: 417 GFNVKQLQQETGASIHVEDAPT 438
G N++ +++ +GA I + + T
Sbjct: 555 GGNLENIRRISGAMIEISASKT 576
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 105/276 (38%), Gaps = 52/276 (18%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI----------RASAF 450
+ILC +GGVIGK G + ++ T A I V D +RVI F
Sbjct: 39 RILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVFDQLHGCSQRVITIYCSVKEKQEEIGF 98
Query: 451 EGLWN-PRSQTIDAILQLQNKTSEFSEKGTITT----------RLLVPSSKVGCILGQGG 499
N P DA+L++ + E+ T RLLVP S+ ++G+ G
Sbjct: 99 TKSENEPLCCAQDALLKVYDAIVASDEENNTKTNVDRDDNKECRLLVPFSQSSSLIGKAG 158
Query: 500 HVINEMRRRTQADIRVVGARVKLQDP-HPGSSEC--IVDIRGSSEHLISAHGTYQSFMTS 556
I +RRRT+A ++VV V DP H + E +V I G E + A F S
Sbjct: 159 ENIKRIRRRTRASVKVVSKDV--SDPSHVCAMEYDNVVVISGEPESVKQAL-----FAVS 211
Query: 557 GQSMKVQPSSYQNINPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQNINPQQSS 616
K+ P +NI P S+ +Q P V ++ PQ
Sbjct: 212 AIMYKINPR--ENI-PLDST---------------SQDVPAASVIVPSDLSNSVYPQTGF 253
Query: 617 YPMHTH---QGAGTNPHITPTQSSYYSSSAQQGTYP 649
Y H QGAG + S + A+ P
Sbjct: 254 YSNQDHILQQGAGVPSYFNALSVSDFQGYAETAANP 289
Score = 38.9 bits (89), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCA 285
++ D N + + R+L P ++VG ++GK G VI +R T A I+V D+L C+
Sbjct: 25 ISHDKINRDELVVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKVF--DQLHGCS 79
Score = 35.4 bits (80), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 23/36 (63%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ R+L P VG ++G+ G VIN +R T+A I+V
Sbjct: 36 VVYRILCPIDVVGGVIGKSGKVINAIRHNTKAKIKV 71
>sp|P57721|PCBP3_HUMAN Poly(rC)-binding protein 3 OS=Homo sapiens GN=PCBP3 PE=2 SV=2
Length = 371
Score = 96.3 bits (238), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 98/379 (25%), Positives = 165/379 (43%), Gaps = 85/379 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 253
Query: 346 --PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 254 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 304
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTI 461
IG +IG+ G + +++Q +GA I + +A S ER I + P + ++
Sbjct: 305 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQITITG-----TPANISL 352
Query: 462 DAILQLQNKTSEFSEKGTI 480
L TSE + GT+
Sbjct: 353 AQYLINARLTSEVTGMGTL 371
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 60.5 bits (145), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 107/270 (39%), Gaps = 64/270 (23%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 219
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF---------------------- 226
A + + PH D L K+H +++ F
Sbjct: 220 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 276
Query: 227 ----GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
G +S D T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 277 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 334
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+++ + I+G P A Y ++ L
Sbjct: 335 ---GSSERQITITGTPANISLAQYLINARL 361
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/97 (25%), Positives = 48/97 (49%), Gaps = 15/97 (15%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
N T+T RLL+ VG ++GK+G+ ++++R E+GA I + + C + +V I+G
Sbjct: 43 NVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN----CP---ERIVTITG 95
Query: 297 KPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
+ +A ++ ++ P KPP +
Sbjct: 96 PTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.4 bits (93), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 295 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 347
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 348 ANISLAQYLINARLTS 363
Score = 38.1 bits (87), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 466 QLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDP 525
++++K SE T+T RLL+ +VG I+G+ G + +MR + GAR+ + +
Sbjct: 32 RMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREES-------GARINISEG 84
Query: 526 HPGSSECIVDIRGSSEHLISA 546
+ E IV I G ++ + A
Sbjct: 85 N--CPERIVTITGPTDAIFKA 103
>sp|P57722|PCBP3_MOUSE Poly(rC)-binding protein 3 OS=Mus musculus GN=Pcbp3 PE=2 SV=3
Length = 371
Score = 94.4 bits (233), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 91/344 (26%), Positives = 152/344 (44%), Gaps = 80/344 (23%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ ER++ I + PT
Sbjct: 49 RLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVTI-TGPT-------- 97
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRI---IEEDLFGGMASDDDNENSTITARLLVP 247
DA+ K I EED+ M++ +T RL+VP
Sbjct: 98 --------------------DAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVP 137
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ V ISG P+ + + +
Sbjct: 138 ASQCGSLIGKGGSKIKEIRESTGAQVQVA-GDMLP---NSTERAVTISGTPDAIIQCVKQ 193
Query: 308 VSTLLHQNPRKD-----KP-PSSFP------QAYGGQNFHSPPAP--MADMH-------- 345
+ ++ ++P K +P P+S P QAY Q ++ P P + +H
Sbjct: 194 ICVVMLESPPKGATIPYRPKPASTPVIFAGGQAYTIQGQYAIPHPDQLTKLHQLAMQQTP 253
Query: 346 --PLG--NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMK 401
PLG N ++P LH + G S +++ PP E++ +
Sbjct: 254 FPPLGQTNPAFPGEKLPLHSSEEAQNLMGQ--------SSGLDASPPASTHELTIPNDL- 304
Query: 402 ILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVI 445
IG +IG+ G + +++Q +GA I + +A S ER I
Sbjct: 305 -------IGCIIGRQGTKINEIRQMSGAQIKIANATEGSSERQI 341
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 82/163 (50%), Gaps = 24/163 (14%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFE 451
G ++ ++++L ++G +IGK G VK++++E+GA I++ + + ER++
Sbjct: 40 GGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEG--NCPERIVT----- 92
Query: 452 GLWNPRSQTIDAILQLQNKTSE----------FSEKGTITTRLLVPSSKVGCILGQGGHV 501
+ P A + K E + K +T RL+VP+S+ G ++G+GG
Sbjct: 93 -ITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTLRLVVPASQCGSLIGKGGSK 151
Query: 502 INEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I E+R T A ++V G D P S+E V I G+ + +I
Sbjct: 152 IKEIRESTGAQVQVAG------DMLPNSTERAVTISGTPDAII 188
Score = 60.1 bits (144), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/270 (22%), Positives = 107/270 (39%), Gaps = 64/270 (23%)
Query: 98 FKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREET 157
FK ++ K +S S S+P T+ R++ P+ + G +IGK G+ +K +RE T
Sbjct: 101 FKAFAMIAYKFEEDIINSMSNSPATSKPPVTL-RLVVPASQCGSLIGKGGSKIKEIREST 159
Query: 158 QAKITVA-DTIPGSEERVIIIYSSPTKIAKTQNK-------------------------- 190
A++ VA D +P S ER + I +P I + +
Sbjct: 160 GAQVQVAGDMLPNSTERAVTISGTPDAIIQCVKQICVVMLESPPKGATIPYRPKPASTPV 219
Query: 191 --DDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF---------------------- 226
A + + PH D L K+H +++ F
Sbjct: 220 IFAGGQAYTIQGQYAIPH---PDQLTKLHQLAMQQTPFPPLGQTNPAFPGEKLPLHSSEE 276
Query: 227 ----GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
G +S D T L +PN+++GC++G++G I +R +GA I++ A
Sbjct: 277 AQNLMGQSSGLDASPPASTHELTIPNDLIGCIIGRQGTKINEIRQMSGAQIKIANATE-- 334
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLL 312
+++ + I+G P A Y ++ L
Sbjct: 335 ---GSSERQITITGTPANISLAQYLINARL 361
Score = 43.9 bits (102), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 53/111 (47%), Gaps = 18/111 (16%)
Query: 226 FGGMASDDDNE---NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLP 282
FGG +E N T+T RLL+ VG ++GK+G+ ++++R E+GA I + +
Sbjct: 29 FGGKMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREESGARINISEGN--- 85
Query: 283 PCAMNTDEMVQISGKPNVAKRALYEVSTLLHQN--------PRKDKPPSSF 325
C + +V I+G + +A ++ ++ P KPP +
Sbjct: 86 -CP---ERIVTITGPTDAIFKAFAMIAYKFEEDIINSMSNSPATSKPPVTL 132
Score = 40.4 bits (93), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P+ +GCI+G+ G INE+R+ + GA++K+ + GSSE + I G+
Sbjct: 295 THELTIPNDLIGCIIGRQGTKINEIRQMS-------GAQIKIANATEGSSERQITITGTP 347
Query: 541 EHLISAHGTYQSFMTS 556
++ A + +TS
Sbjct: 348 ANISLAQYLINARLTS 363
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 466 QLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDP 525
++++K SE T+T RLL+ +VG I+G+ G + +MR + GAR+ + +
Sbjct: 32 KMESKVSEGGLNVTLTIRLLMHGKEVGSIIGKKGETVKKMREES-------GARINISEG 84
Query: 526 HPGSSECIVDIRGSSEHLISA 546
+ E IV I G ++ + A
Sbjct: 85 N--CPERIVTITGPTDAIFKA 103
>sp|O00425|IF2B3_HUMAN Insulin-like growth factor 2 mRNA-binding protein 3 OS=Homo sapiens
GN=IGF2BP3 PE=1 SV=2
Length = 579
Score = 91.3 bits (225), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 104/411 (25%), Positives = 178/411 (43%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQGSPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENAG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGNVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P + GMP P G PS M PP E S ++ + A +
Sbjct: 375 -LFPPTS----GMP--PPTSG---PPSAM-------TPPYPQFEQSETETVHLFIPALSV 417
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 472
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 473 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQNLSSAEVVV 523
Score = 34.3 bits (77), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 44/97 (45%), Gaps = 12/97 (12%)
Query: 473 EFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSEC 532
+F + T T L +P+ VG I+G+ G I ++ R A I++ A P +
Sbjct: 399 QFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEA------PDAKVR 452
Query: 533 IVDIRGSSEHLISAHGTY------QSFMTSGQSMKVQ 563
+V I G E A G ++F++ + +K++
Sbjct: 453 MVIITGPPEAQFKAQGRIYGKIKEENFVSPKEEVKLE 489
>sp|Q9CPN8|IF2B3_MOUSE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Mus musculus
GN=Igf2bp3 PE=1 SV=1
Length = 579
Score = 84.7 bits (208), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 99/411 (24%), Positives = 175/411 (42%), Gaps = 75/411 (18%)
Query: 114 SSREQSFGN---SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPG 169
SSR+ S G+ +P D R+L P++ +G +IGK G ++++ ++TQ+KI V G
Sbjct: 179 SSRQASPGSVSKQKPCDLPLRLLVPTQFVGAIIGKEGATIRNITKQTQSKIDVHRKENTG 238
Query: 170 SEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGM 229
+ E+ I I S+P + +A ++ E M H AQD + EE
Sbjct: 239 AAEKSITILSTP--------EGTSAACKSILEIM--HKEAQDI------KFTEE------ 276
Query: 230 ASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTD 289
I ++L NN VG L+GK G ++++ +T I + P L N +
Sbjct: 277 ----------IPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQEL--TLYNPE 324
Query: 290 EMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGN 349
+ + G +A E+ + + S+ N + P +++ LG
Sbjct: 325 RTITVKGSVETCAKAEEEIMKKIRE---------SYENDIASMNLQAHLIPGLNLNALG- 374
Query: 350 SSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKI 409
+P P++ PS + PP E S ++ + A +
Sbjct: 375 -LFP---------PTSGMPPPTSGPPSTL-------TPPYPQFEQSETETVHLFIPALSV 417
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGK G ++KQL + GASI + AP ++ + +R G P A ++
Sbjct: 418 GAIIGKQGQHIKQLSRFAGASIKI--APAEAPDAKVRMVIITG---PPEAQFKAQGRIYG 472
Query: 470 KTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K E + E+ + + VPS G ++G+GG +NE++ + A++ V
Sbjct: 473 KIKEENFVSPKEEVKLEAHIRVPSFAAGRVIGKGGKTVNELQSLSSAEVVV 523
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 42/201 (20%), Positives = 75/201 (37%), Gaps = 53/201 (26%)
Query: 395 SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE-------------------- 434
+ E +KIL +G +IGK G N+K+++Q+T I +
Sbjct: 274 TEEIPLKILAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQELTLYNPERTITVKGSV 333
Query: 435 DAPTDSDERVIRA--SAFE---------------------GLWNPRSQTIDAILQLQNKT 471
+ ++E +++ ++E GL+ P S +
Sbjct: 334 ETCAKAEEEIMKKIRESYENDIASMNLQAHLIPGLNLNALGLFPPTSGMPPPTSGPPSTL 393
Query: 472 S----EFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHP 527
+ +F + T T L +P+ VG I+G+ G I ++ R A I++ A P
Sbjct: 394 TPPYPQFEQSETETVHLFIPALSVGAIIGKQGQHIKQLSRFAGASIKIAPAEA------P 447
Query: 528 GSSECIVDIRGSSEHLISAHG 548
+ +V I G E A G
Sbjct: 448 DAKVRMVIITGPPEAQFKAQG 468
>sp|O42254|IF2B1_CHICK Insulin-like growth factor 2 mRNA-binding protein 1 OS=Gallus
gallus GN=IGF2BP1 PE=1 SV=1
Length = 576
Score = 82.8 bits (203), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 90/398 (22%), Positives = 169/398 (42%), Gaps = 73/398 (18%)
Query: 124 QPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPT 182
QP D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I I+S+P
Sbjct: 192 QPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISIHSTP- 250
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
E AA +L++ + + D +
Sbjct: 251 ---------------------EGCSAACKMILEIMQK----------EAKDTKTADEVPL 279
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 280 KILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGSIENCC 337
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGM 362
+A E+ + + ++ + S P ++ +G +PA ++++
Sbjct: 338 KAEQEIMKKVRE---------AYENDVAAMSLQSHLIPGLNLAAVG--LFPASSNAVPPP 386
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS+ + G S M PP Q ++ + A +G +IGK G ++KQ
Sbjct: 387 PSS--VSGAAPYSSFM--------PPEQE-------TVHVFIPAQAVGAIIGKKGQHIKQ 429
Query: 423 LQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EK 477
L + ASI + AP ++ + +R G P A ++ K E + E+
Sbjct: 430 LSRFASASIKI--APPETPDSKVRMVVITG---PPEAQFKAQGRIYGKLKEENFFGPKEE 484
Query: 478 GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 485 VKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 522
Score = 37.7 bits (86), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 94 PNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSL 153
P QFK +G + + E FG + I P+ G VIGK G V L
Sbjct: 459 PEAQFKAQGRI------YGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNEL 512
Query: 154 REETQAKITV-ADTIPGSEERVII 176
+ T A++ V D P E+VI+
Sbjct: 513 QNLTAAEVVVPRDQTPDENEQVIV 536
>sp|Q9PW80|IF2B3_DANRE Insulin-like growth factor 2 mRNA-binding protein 3 OS=Danio rerio
GN=igf2bp3 PE=1 SV=1
Length = 582
Score = 80.1 bits (196), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 94/399 (23%), Positives = 166/399 (41%), Gaps = 74/399 (18%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKI 184
+D R+L P++ +G +IGK G ++++ ++T +KI + G+ E+ I ++S+P
Sbjct: 193 SDVPLRLLVPTQFVGAIIGKEGATIRNITKQTHSKIDIHRKENAGAAEKPITVHSTPEGC 252
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
+ SA E M+ + +I EE I ++
Sbjct: 253 S--------SACRNIMEIMQKEA--------IDTKITEE----------------IPLKI 280
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L NN VG L+GK G ++++ +T I + P L N + + + G + +A
Sbjct: 281 LAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGTLDACAKA 338
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPS 364
E+ + ++ D +A MH L ++ P N L+ +
Sbjct: 339 EEEIMKKVRESYEND---------------------VAAMH-LQSNLIPGLN--LNALGL 374
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPG-QMGEVSAEFSMK-----ILCSAGKIGGVIGKGGF 418
P G PS ++ PPG Q G S M+ + A +G +IGK G
Sbjct: 375 FPGAASGGISPS-----VVSGPPPGAQAGYQSFGAQMESETVHLFIPALAVGAIIGKQGQ 429
Query: 419 NVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEF--SE 476
++KQL + GASI + AP D + R G + + I + + F E
Sbjct: 430 HIKQLSRFAGASIKI--APADGIDAKQRMVIISGPPEAQFKAQGRIFGKLKEENFFGPKE 487
Query: 477 KGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ + + VPS G ++G+GG +NE++ T A++ V
Sbjct: 488 EVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEVVV 526
Score = 55.5 bits (132), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 94/209 (44%), Gaps = 38/209 (18%)
Query: 118 QSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV--ADTIPGSEERVI 175
QSFG ++TV+ + P+ +G +IGK G +K L A I + AD I +++R++
Sbjct: 400 QSFGAQMESETVH-LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPADGI-DAKQRMV 457
Query: 176 IIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDN 235
II P K Q ++ ++ EE+ FG
Sbjct: 458 IISGPPEAQFKAQG-------------------------RIFGKLKEENFFG------PK 486
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
E + A + VP+ G ++GK G + L++ T A + V+P D+ P N +V+I+
Sbjct: 487 EEVKLEAHIKVPSFAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKIT 543
Query: 296 GKPNVAKRALYEVSTLLHQNPRKDKPPSS 324
G ++ A ++ ++ Q R+ +P S
Sbjct: 544 GHFYASQLAQRKIQEIISQVRRQQQPKPS 572
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 94 PNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSL 153
P QFK +G + + E FG + I PS G VIGK G V L
Sbjct: 463 PEAQFKAQGRI------FGKLKEENFFGPKEEVKLEAHIKVPSFAAGRVIGKGGKTVNEL 516
Query: 154 REETQAKITV-ADTIPGSEERVII 176
+ T A++ V D P ++V++
Sbjct: 517 QNLTSAEVVVPRDQTPDENDQVVV 540
>sp|P38151|PBP2_YEAST PAB1-binding protein 2 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=PBP2 PE=1 SV=1
Length = 413
Score = 78.2 bits (191), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/372 (23%), Positives = 161/372 (43%), Gaps = 71/372 (19%)
Query: 104 VGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV 163
V +K + S+S + ++ P+D R+LC + ++G G + ++ ET A+I +
Sbjct: 44 VALKDAD-SHSDNDHDSPDNVPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINI 102
Query: 164 ADTIPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEE 223
++ I G ER++ + + +AK + ALL+ H
Sbjct: 103 SNNIRGVPERIVYVRGTCDDVAKA------------------YGMIVRALLEEH------ 138
Query: 224 DLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPP 283
++D+ E+ I+ LL+P++++GC++GKRG ++ + + A + P L
Sbjct: 139 ------GNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAKLFASPNQLL-- 190
Query: 284 CAMNTDEMVQISGKPNVAKRALYEVS-TLLH---QNPRKDKPPSSFPQAYGGQNF---HS 336
++ D ++ I+G P+ A + +S TLL+ ++P+K+ S + Q + HS
Sbjct: 191 --LSNDRILTINGVPDAIHIATFYISQTLLNFQMESPQKNVKRSIYYQPTQFNSVLIDHS 248
Query: 337 PPAPM-----ADMHPLGN--SSWPARN----SSLHGMPSTPWM-----GGYGDQPS---- 376
P + HP S P +N S+L M + + QP+
Sbjct: 249 QPNTIFHQRNHQYHPSDKLLSYKPNKNLPISSTLLSMATPQYTTASVANATAFQPNFVIP 308
Query: 377 --RMGSGSINSCPPGQ---MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASI 431
+ G + S PG M V E I +G VIGK G ++ +++ TG SI
Sbjct: 309 NVTVLDGPVISPAPGNHLLMNFVQQE----IFIDEKFVGNVIGKDGKHINSVKESTGCSI 364
Query: 432 HVEDAPTDSDER 443
++D S ER
Sbjct: 365 IIQDPVEGSSER 376
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/121 (20%), Positives = 58/121 (47%), Gaps = 2/121 (1%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF-EG 452
V ++ +++LC ++G G + +++ ET A I++ + ER++ +
Sbjct: 63 VPSDVHLRMLCLVKHASLIVGHKGATISRIKSETSARINISNNIRGVPERIVYVRGTCDD 122
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQAD 512
+ + A+L+ ++ + E I+ LL+P +GCI+G+ G + E+ + A
Sbjct: 123 VAKAYGMIVRALLE-EHGNEDNGEDIEISINLLIPHHLMGCIIGKRGSRLREIEDLSAAK 181
Query: 513 I 513
+
Sbjct: 182 L 182
>sp|O57526|IF23B_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-B OS=Xenopus
laevis GN=igf2bp3-b PE=1 SV=1
Length = 593
Score = 77.8 bits (190), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 88/393 (22%), Positives = 159/393 (40%), Gaps = 73/393 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L P++ +G +IGK G ++++ ++TQ+KI + G+ E+ I I+S+P
Sbjct: 208 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTP-------- 259
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
E C K+ I++++ + D I ++L NN
Sbjct: 260 -----------EGCSAAC-------KIIMEIMQKE------AQDTKFTEEIPLKILAHNN 295
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VG L+GK G ++++ +T I + P L N + + + G +A EV
Sbjct: 296 FVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIETCAKAEEEVM 353
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG--NSSWPARNSSLHGMPSTPW 367
+ + S+ N + P +++ LG S G+ S
Sbjct: 354 KKIRE---------SYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGMPPPSAGVSSPTT 404
Query: 368 MGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQET 427
Y PP G+ ++ + A +G +IGK G ++KQL +
Sbjct: 405 SASY---------------PP--FGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFA 447
Query: 428 GASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EKGTITT 482
GASI + AP + + +R G P A ++ K E + E+ +
Sbjct: 448 GASIKI--APAEGPDAKLRMVIITG---PPEAQFKAQGRIYGKLKEENFFGPKEEVKLEA 502
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ VPS G ++G+GG +NE++ T A++ V
Sbjct: 503 HIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVV 535
Score = 50.8 bits (120), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 39/193 (20%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIY 178
FG ++TV+ + P+ +G +IGK G +K L A I +A P ++ R++II
Sbjct: 411 FGQQPESETVH-LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 469
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
P K Q +++ ++ EE+ FG E
Sbjct: 470 GPPEAQFKAQG-------------------------RIYGKLKEENFFG------PKEEV 498
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-- 296
+ A + VP+ G ++GK G + L++ T A + V+P D+ P N +V+I+G
Sbjct: 499 KLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 555
Query: 297 -KPNVAKRALYEV 308
+A+R + E+
Sbjct: 556 YASQLAQRKIQEI 568
Score = 36.6 bits (83), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 94 PNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSL 153
P QFK +G + + E FG + I PS G VIGK G V L
Sbjct: 472 PEAQFKAQGRI------YGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNEL 525
Query: 154 REETQAKITV-ADTIPGSEERVII 176
+ T A++ V D P ++V++
Sbjct: 526 QNLTSAEVVVPRDQTPDENDQVVV 549
>sp|O73932|IF23A_XENLA Insulin-like growth factor 2 mRNA-binding protein 3-A OS=Xenopus
laevis GN=igf2bp3-a PE=1 SV=1
Length = 594
Score = 77.4 bits (189), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 86/391 (21%), Positives = 159/391 (40%), Gaps = 69/391 (17%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKIAKTQN 189
R+L P++ +G +IGK G ++++ ++TQ+KI + G+ E+ I I+S+P
Sbjct: 209 RMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTP-------- 260
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNN 249
E AA ++++ + + D I ++L NN
Sbjct: 261 --------------EGCSAACKIIMEIMQK----------EAQDTKFTEEIPLKILAHNN 296
Query: 250 MVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
VG L+GK G ++++ +T I + P L N + + + G +A E+
Sbjct: 297 FVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIEPCAKAEEEIM 354
Query: 310 TLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMG 369
+ + S+ N + P +++ LG + + G
Sbjct: 355 KKIRE---------SYENDIAAMNLQAHLIPGLNLNALG-------------LFPSSSSG 392
Query: 370 GYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGA 429
S S PP G+ ++ + A +G +IGK G ++KQL + GA
Sbjct: 393 MPPPSVGVPSPTSSTSYPP--FGQQPESETVHLFIPALAVGAIIGKQGQHIKQLSRFAGA 450
Query: 430 SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS-----EKGTITTRL 484
SI + AP + + +R G P A ++ K E + E+ + T +
Sbjct: 451 SIKI--APAEGPDAKLRMVIITG---PPEAQFKAQGRIYGKLKEENFFGPKEEVKLETHI 505
Query: 485 LVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
VPS G ++G+GG +NE++ T A++ V
Sbjct: 506 KVPSYAAGRVIGKGGKTVNELQNLTSAEVVV 536
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/193 (24%), Positives = 85/193 (44%), Gaps = 39/193 (20%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIY 178
FG ++TV+ + P+ +G +IGK G +K L A I +A P ++ R++II
Sbjct: 412 FGQQPESETVH-LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 470
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
P K Q +++ ++ EE+ FG E
Sbjct: 471 GPPEAQFKAQG-------------------------RIYGKLKEENFFG------PKEEV 499
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-- 296
+ + VP+ G ++GK G + L++ T A + V+P D+ P N + +V+I+G
Sbjct: 500 KLETHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDEVVVKITGHF 556
Query: 297 -KPNVAKRALYEV 308
+A+R + E+
Sbjct: 557 YASQLAQRKIQEI 569
Score = 36.2 bits (82), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 35/84 (41%), Gaps = 7/84 (8%)
Query: 94 PNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSL 153
P QFK +G + + E FG + I PS G VIGK G V L
Sbjct: 473 PEAQFKAQGRI------YGKLKEENFFGPKEEVKLETHIKVPSYAAGRVIGKGGKTVNEL 526
Query: 154 REETQAKITV-ADTIPGSEERVII 176
+ T A++ V D P + V++
Sbjct: 527 QNLTSAEVVVPRDQTPDENDEVVV 550
>sp|Q08CK7|IF2B1_DANRE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Danio rerio
GN=igf2bp1 PE=1 SV=1
Length = 598
Score = 77.0 bits (188), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 107/443 (24%), Positives = 184/443 (41%), Gaps = 97/443 (21%)
Query: 114 SSREQSFGNSQP-----ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTI 167
+SR+ S G+ P AD R+L P++ +G +IGK G ++++ ++TQ+KI V
Sbjct: 180 TSRQMSPGSGIPSKHQHADIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKEN 239
Query: 168 PGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFG 227
G+ E+ I I+S+P E AA +L++ ++
Sbjct: 240 AGAAEKPISIHSTP----------------------EGCSAACRMILEIMNQ-------- 269
Query: 228 GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMN 287
+ D + ++L NN VG L+GK G ++++ +T I + P L N
Sbjct: 270 --EAKDTKTADEVPLKVLAHNNFVGRLIGKEGRNLKKVEQDTDTKITISPLQDL--TLYN 325
Query: 288 TDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPL 347
+ + + G E L Q K +AY
Sbjct: 326 PERTITVKGS--------IEACCLAEQEIMK-----KVREAY------------------ 354
Query: 348 GNSSWPARNSSLHGMPSTPWMGGYG-------DQPSRMGSGSINSCPPGQMGEVSAEFSM 400
++ A N H +P +G G P +G+ S+ P G MG S + ++
Sbjct: 355 -DNDIAAMNQQTHLIPGLN-LGAIGLFPPSSAMPPPALGN-SVPGPPYGPMG-ASEQETV 410
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQT 460
+ A +G +IGK G ++KQL + GASI + AP ++ + +R G P
Sbjct: 411 HVYIPAQAVGALIGKKGQHIKQLSRFAGASIKI--APAEAPDSKMRMVIVTG---PPEAQ 465
Query: 461 IDAILQLQNKTSEFS-----EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
A ++ K E + E+ + T + V ++ G ++G+GG +NE++ T A+ V
Sbjct: 466 FKAQGRIYGKLKEENFFGPKEEVKLETHIKVAAAAAGRVIGKGGKTVNELQNLTAAE--V 523
Query: 516 VGARVKLQDPHPGSSECIVDIRG 538
V R + D H + IV I G
Sbjct: 524 VVPREQTPDEH---DQVIVKIIG 543
>sp|O88477|IF2B1_MOUSE Insulin-like growth factor 2 mRNA-binding protein 1 OS=Mus musculus
GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 75.5 bits (184), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 160/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
QP D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQPVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 389 SVTGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVVITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
Score = 35.8 bits (81), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 94 PNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSL 153
P QFK +G + + E FG + I P+ G VIGK G V L
Sbjct: 460 PEAQFKAQGRI------YGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNEL 513
Query: 154 REETQAKITV-ADTIPGSEERVII 176
+ T A++ V D P ++VI+
Sbjct: 514 QNLTAAEVVVPRDQTPDENDQVIV 537
>sp|Q5SF07|IF2B2_MOUSE Insulin-like growth factor 2 mRNA-binding protein 2 OS=Mus musculus
GN=Igf2bp2 PE=1 SV=1
Length = 592
Score = 75.1 bits (183), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 108/493 (21%), Positives = 191/493 (38%), Gaps = 102/493 (20%)
Query: 115 SREQSFG-----NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIP 168
+REQ G ++ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 169 AREQGHGPGSSSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKENS 228
Query: 169 GSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGG 228
G+ E+ + I+++P E A +L++ +
Sbjct: 229 GAAEKPVTIHATP----------------------EGTSEACRMILEIMQK--------- 257
Query: 229 MASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNT 288
+D+ + ++L N VG L+GK G ++++ ETG I + L N
Sbjct: 258 -EADETKLAEEVPLKILAHNGFVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIYNP 314
Query: 289 DEMVQISGKPNVAKRALYEV---------STLLHQNPRKDKPPSSFPQAYG----GQNFH 335
+ + + G A E+ + +L N + + P A G G +
Sbjct: 315 ERTITVRGTIEACANAEIEIMKKLREAFENDMLAVNQQANLIPGLNLSALGIFSTGLSVL 374
Query: 336 SPPA------PMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPG 389
PPA P HP S SSL+ + P +
Sbjct: 375 PPPAGPRGVPPSPPYHPFATHS--GYFSSLYPHHHFGPFPHHHSYPEQE----------- 421
Query: 390 QMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRA 447
++ + +G +IGK G ++KQL + GASI + + P S+ VI
Sbjct: 422 ---------TVSLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIIT 472
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINE 504
E + + + + K F E+ + + VPSS G ++G+GG +NE
Sbjct: 473 GPPEAQFKAQGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNE 527
Query: 505 MRRRTQADIRVVGARVKLQDPHPG-SSECIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQ 563
++ T A++ V +D P + E IV I G H ++ + Q +K Q
Sbjct: 528 LQNLTSAEVIVP------RDQTPDENEEVIVRIIG---HFFASQTAQRKIREIVQQVKQQ 578
Query: 564 PSSY-QNINPQQS 575
Y Q + PQ+S
Sbjct: 579 EQRYPQGVAPQRS 591
Score = 35.0 bits (79), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 94 PNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSL 153
P QFK +G + + E F + I PS G VIGK G V L
Sbjct: 475 PEAQFKAQGRI------FGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNEL 528
Query: 154 REETQAKITV-ADTIPGSEERVII 176
+ T A++ V D P E VI+
Sbjct: 529 QNLTSAEVIVPRDQTPDENEEVIV 552
>sp|Q8CGX0|IF2B1_RAT Insulin-like growth factor 2 mRNA-binding protein 1 OS=Rattus
norvegicus GN=Igf2bp1 PE=1 SV=1
Length = 577
Score = 75.1 bits (183), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 160/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ GS P +M +++ A +G +IGK G +
Sbjct: 389 SVTGAAPY-------------GSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVVITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
Score = 35.8 bits (81), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 94 PNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSL 153
P QFK +G + + E FG + I P+ G VIGK G V L
Sbjct: 460 PEAQFKAQGRI------YGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNEL 513
Query: 154 REETQAKITV-ADTIPGSEERVII 176
+ T A++ V D P ++VI+
Sbjct: 514 QNLTAAEVVVPRDQTPDENDQVIV 537
>sp|Q9Y6M1|IF2B2_HUMAN Insulin-like growth factor 2 mRNA-binding protein 2 OS=Homo sapiens
GN=IGF2BP2 PE=1 SV=2
Length = 599
Score = 74.7 bits (182), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 101/422 (23%), Positives = 171/422 (40%), Gaps = 69/422 (16%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N + P ++
Sbjct: 320 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNQQANLIPGLNLSA 370
Query: 347 LG-NSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSC-PPGQMGEVSAEFS----- 399
LG S+ + S G P Y P SG +S P Q G S
Sbjct: 371 LGIFSTGLSVLSPPAGPRGAPPAAPY--HPFTTHSGYFSSLYPHHQFGPFPHHHSYPEQE 428
Query: 400 -MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNP 456
+ + +G +IGK G ++KQL + GASI + + P S+ VI E +
Sbjct: 429 IVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKA 488
Query: 457 RSQTIDAILQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADI 513
+ + + K F E+ + + VPSS G ++G+GG +NE++ T A++
Sbjct: 489 QGRIFGKL-----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV 543
Query: 514 RV 515
V
Sbjct: 544 IV 545
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 422 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 481
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 482 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 510
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 511 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 567
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 568 SQTAQRKIREI 578
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 163 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 218
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 219 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEG-TSEACRMILEIMQKEADETKLAEE--I 275
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 276 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 331
Query: 541 EHLISA 546
E SA
Sbjct: 332 EACASA 337
Score = 35.4 bits (80), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 94 PNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSL 153
P QFK +G + + E F + I PS G VIGK G V L
Sbjct: 482 PEAQFKAQGRI------FGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNEL 535
Query: 154 REETQAKITV-ADTIPGSEERVII 176
+ T A++ V D P E VI+
Sbjct: 536 QNLTSAEVIVPRDQTPDENEEVIV 559
>sp|Q5ZLP8|IF2B3_CHICK Insulin-like growth factor 2 mRNA-binding protein 3 OS=Gallus
gallus GN=IGF2BP3 PE=2 SV=1
Length = 584
Score = 74.3 bits (181), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 87/401 (21%), Positives = 162/401 (40%), Gaps = 79/401 (19%)
Query: 126 ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYSSPTKI 184
+D R+L P++ +G +IGK G ++++ ++TQ+KI + G+ E+ I I+S+P
Sbjct: 195 SDVPLRMLVPTQFVGAIIGKEGATIRNITKQTQSKIDIHRKENAGAAEKPITIHSTP--- 251
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARL 244
E C K+ I++++ + D I ++
Sbjct: 252 ----------------EGCSTAC-------KIIMEIMQKE------AQDTKFTEEIPLKI 282
Query: 245 LVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRA 304
L NN VG L+GK G ++++ +T I + P L N + + + G +A
Sbjct: 283 LAHNNFVGRLIGKEGRNLKKIEQDTDTKITISPLQDL--TLYNPERTITVKGSIETCAKA 340
Query: 305 LYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLG-----NSSWPARNSSL 359
E+ + + S+ N + P +++ LG +S P S+
Sbjct: 341 EEEIMKKIRE---------SYENDIAAMNLQAHLIPGLNLNALGLFPPSSSGIPPPAVSV 391
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ +G QP ++ + A +G +IGK G +
Sbjct: 392 ASAAAAASYPPFGQQPESE--------------------TVHLFIPALAVGAIIGKQGQH 431
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + GASI + AP + + +R G P A ++ K E +
Sbjct: 432 IKQLSRFAGASIKI--APAEGPDAKLRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 486
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + + VPS G ++G+GG +NE++ T A++ V
Sbjct: 487 KEEVKLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEVVV 527
Score = 49.3 bits (116), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 85/193 (44%), Gaps = 39/193 (20%)
Query: 120 FGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIY 178
FG ++TV+ + P+ +G +IGK G +K L A I +A P ++ R++II
Sbjct: 403 FGQQPESETVH-LFIPALAVGAIIGKQGQHIKQLSRFAGASIKIAPAEGPDAKLRMVIIT 461
Query: 179 SSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
P K Q +++ ++ EE+ FG E
Sbjct: 462 GPPEAQFKAQG-------------------------RIYGKLKEENFFG------PKEEV 490
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG-- 296
+ A + VP+ G ++GK G + L++ T A + V+P D+ P N +V+I+G
Sbjct: 491 KLEAHIKVPSYAAGRVIGKGGKTVNELQNLTSAEV-VVPRDQTPD--ENDQVVVKITGHF 547
Query: 297 -KPNVAKRALYEV 308
+A+R + E+
Sbjct: 548 YACQLAQRKIQEI 560
Score = 36.2 bits (82), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 94 PNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSL 153
P QFK +G + + E FG + I PS G VIGK G V L
Sbjct: 464 PEAQFKAQGRI------YGKLKEENFFGPKEEVKLEAHIKVPSYAAGRVIGKGGKTVNEL 517
Query: 154 REETQAKITV-ADTIPGSEERVII 176
+ T A++ V D P ++V++
Sbjct: 518 QNLTSAEVVVPRDQTPDENDQVVV 541
>sp|Q9NZI8|IF2B1_HUMAN Insulin-like growth factor 2 mRNA-binding protein 1 OS=Homo sapiens
GN=IGF2BP1 PE=1 SV=2
Length = 577
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 86/401 (21%), Positives = 159/401 (39%), Gaps = 72/401 (17%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADTIPGSEERVIIIYS 179
Q D R+L P++ +G +IGK G ++++ ++TQ+KI V G+ E+ I ++S
Sbjct: 189 AKQQQVDIPLRLLVPTQYVGAIIGKEGATIRNITKQTQSKIDVHRKENAGAAEKAISVHS 248
Query: 180 SPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENST 239
+P E +A +L++ + + D
Sbjct: 249 TP----------------------EGCSSACKMILEIMHK----------EAKDTKTADE 276
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
+ ++L NN VG L+GK G ++++ +T I + L N + + + G
Sbjct: 277 VPLKILAHNNFVGRLIGKEGRNLKKVEQDTETKITISSLQDL--TLYNPERTITVKGAIE 334
Query: 300 VAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL 359
RA E+ + + D S Q+ P +A + SS
Sbjct: 335 NCCRAEQEIMKKVREAYENDVAAMSL------QSHLIPGLNLAAVGLFPASSSAVPPPPS 388
Query: 360 HGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFN 419
+ P+ S P +M +++ A +G +IGK G +
Sbjct: 389 SVTGAAPY-------------SSFMQAPEQEM--------VQVFIPAQAVGAIIGKKGQH 427
Query: 420 VKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---- 475
+KQL + ASI + AP ++ + +R G P A ++ K E +
Sbjct: 428 IKQLSRFASASIKI--APPETPDSKVRMVIITG---PPEAQFKAQGRIYGKLKEENFFGP 482
Query: 476 -EKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
E+ + T + VP+S G ++G+GG +NE++ T A++ V
Sbjct: 483 KEEVKLETHIRVPASAAGRVIGKGGKTVNELQNLTAAEVVV 523
Score = 35.8 bits (81), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 36/84 (42%), Gaps = 7/84 (8%)
Query: 94 PNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSL 153
P QFK +G + + E FG + I P+ G VIGK G V L
Sbjct: 460 PEAQFKAQGRI------YGKLKEENFFGPKEEVKLETHIRVPASAAGRVIGKGGKTVNEL 513
Query: 154 REETQAKITV-ADTIPGSEERVII 176
+ T A++ V D P ++VI+
Sbjct: 514 QNLTAAEVVVPRDQTPDENDQVIV 537
>sp|Q5RB68|IF2B2_PONAB Insulin-like growth factor 2 mRNA-binding protein 2 OS=Pongo abelii
GN=IGF2BP2 PE=2 SV=1
Length = 556
Score = 71.6 bits (174), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 95/414 (22%), Positives = 162/414 (39%), Gaps = 96/414 (23%)
Query: 113 NSSREQSF---GNSQP--ADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITV-ADT 166
+SSREQ G SQ D RIL P++ +G +IGK G +K++ ++TQ+++ +
Sbjct: 174 HSSREQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKNITKQTQSRVDIHRKE 233
Query: 167 IPGSEERVIIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLF 226
G+ E+ + I+++P E C R+I E +
Sbjct: 234 NSGAAEKPVTIHATP-------------------EGTSEAC-----------RMILEIM- 262
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
+D+ I ++L N +VG L+GK G ++++ ETG I + L
Sbjct: 263 -QKEADETKLAEEIPLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISSLQDL--SIY 319
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP 346
N + + + G A E+ L + +F N HS + ++P
Sbjct: 320 NPERTITVKGTVEACASAEIEIMKKLRE---------AFENDMLAVNTHS--GYFSSLYP 368
Query: 347 LGNSSWPARNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSA 406
H P Y +Q +N P Q
Sbjct: 369 H------------HQFGPFPHHHSYPEQEI------VNLFIPTQA--------------- 395
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVE--DAPTDSDERVIRASAFEGLWNPRSQTIDAI 464
+G +IGK G ++KQL + GASI + + P S+ VI E + + + +
Sbjct: 396 --VGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGPPEAQFKAQGRIFGKL 453
Query: 465 LQLQNKTSEF---SEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
K F E+ + + VPSS G ++G+GG +NE++ T A++ V
Sbjct: 454 -----KEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEVIV 502
Score = 48.5 bits (114), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/191 (23%), Positives = 81/191 (42%), Gaps = 38/191 (19%)
Query: 122 NSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTI-PGSEERVIIIYSS 180
+S P + + P++ +G +IGK G +K L A I +A P ER++II
Sbjct: 379 HSYPEQEIVNLFIPTQAVGAIIGKKGAHIKQLARFAGASIKIAPAEGPDVSERMVIITGP 438
Query: 181 PTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTI 240
P K Q + + ++ EE+ F + E +
Sbjct: 439 PEAQFKAQGR-------------------------IFGKLKEENFF------NPKEEVKL 467
Query: 241 TARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG---K 297
A + VP++ G ++GK G + L++ T A + ++P D+ P N + +V+I G
Sbjct: 468 EAHIRVPSSTAGRVIGKGGKTVNELQNLTSAEV-IVPRDQTPD--ENEEVIVRIIGHFFA 524
Query: 298 PNVAKRALYEV 308
A+R + E+
Sbjct: 525 SQTAQRKIREI 535
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 83/186 (44%), Gaps = 13/186 (6%)
Query: 363 PSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
PS P GD SR P G +F ++IL +G +IGK G +K
Sbjct: 163 PSPPQRAQRGDHSSR----EQGHAPGGTSQARQIDFPLRILVPTQFVGAIIGKEGLTIKN 218
Query: 423 LQQETGA--SIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTI 480
+ ++T + IH ++ +++ V + EG + + I I+Q + ++ +E+ I
Sbjct: 219 ITKQTQSRVDIHRKENSGAAEKPVTIHATPEGT-SEACRMILEIMQKEADETKLAEE--I 275
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
++L + VG ++G+ G + ++ T I + LQD + E + ++G+
Sbjct: 276 PLKILAHNGLVGRLIGKEGRNLKKIEHETGTKITISS----LQDLSIYNPERTITVKGTV 331
Query: 541 EHLISA 546
E SA
Sbjct: 332 EACASA 337
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 34/84 (40%), Gaps = 7/84 (8%)
Query: 94 PNNQFKRKGVVGIKKGNWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSL 153
P QFK +G + + E F + I PS G VIGK G V L
Sbjct: 439 PEAQFKAQGRI------FGKLKEENFFNPKEEVKLEAHIRVPSSTAGRVIGKGGKTVNEL 492
Query: 154 REETQAKITV-ADTIPGSEERVII 176
+ T A++ V D P E VI+
Sbjct: 493 QNLTSAEVIVPRDQTPDENEEVIV 516
>sp|Q61990|PCBP2_MOUSE Poly(rC)-binding protein 2 OS=Mus musculus GN=Pcbp2 PE=1 SV=1
Length = 362
Score = 70.9 bits (172), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 101/216 (46%), Gaps = 45/216 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKD-----KP-PSSFPQAY-GGQNFHS 336
+ ++ ++P K +P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLESPPKGVTIPYRPKPSSSPVIFAGGQDRYS 197
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.2 bits (95), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 284 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 336
Query: 539 SSEHL 543
S+ +
Sbjct: 337 SAASI 341
Score = 40.8 bits (94), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>sp|Q0VCU0|PCBP4_BOVIN Poly(rC)-binding protein 4 OS=Bos taurus GN=PCBP4 PE=2 SV=1
Length = 403
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 82/321 (25%), Positives = 136/321 (42%), Gaps = 60/321 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL-----HGMP 363
++ ++P K P G S + G + PA + L H +P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVT-PAEVTKLQQLSGHAVP 225
Query: 364 -STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
++P M G PS S S EF L IG VIG+ G + +
Sbjct: 226 FASPSM-VPGLDPSTQTS--------------SQEF----LVPNDLIGCVIGRQGSKISE 266
Query: 423 LQQETGASIHVEDAPTDSDER 443
++Q +GA I + + + ER
Sbjct: 267 IRQMSGAHIKIGNQAEGAGER 287
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 95 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFG-------- 227
P I + E+ + P + LL + + +G
Sbjct: 155 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTPAEVT 214
Query: 228 ---------------GMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
M D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 215 KLQQLSGHAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 274
Query: 273 IRV 275
I++
Sbjct: 275 IKI 277
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
Score = 39.7 bits (91), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 54/224 (24%), Positives = 92/224 (41%), Gaps = 72/224 (32%)
Query: 388 PGQMGEVS-AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE-DAPTDSDER-- 443
P G VS +++++ A + G +IGK G +K++++ TGA + V D +S ER
Sbjct: 91 PANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAV 150
Query: 444 ------------------VIRASAFEGLWNPRSQTIDAILQLQNKTSEFS---EKGTIT- 481
VI S +G P ++ L + FS + GT+T
Sbjct: 151 TVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSTNQGFSVQGQYGTVTP 210
Query: 482 ---TRL------------------------------LVPSSKVGCILGQGGHVINEMRRR 508
T+L LVP+ +GC++G+ G I+E+R+
Sbjct: 211 AEVTKLQQLSGHAVPFASPSMVPGLDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQM 270
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGS------SEHLISA 546
+ GA +K+ + G+ E V I GS +++LI+A
Sbjct: 271 S-------GAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITA 307
Score = 37.0 bits (84), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 133 LCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ 188
L P+ IG VIG+ G+ + +R+ + A I + + G+ ER + I SP IA Q
Sbjct: 247 LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQ 302
Score = 35.8 bits (81), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 26/37 (70%)
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
T+T R+L+ VG ++GK+G+ ++R+R ++ A I +
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI 53
>sp|O19048|PCBP1_RABIT Poly(rC)-binding protein 1 OS=Oryctolagus cuniculus GN=PCBP1 PE=2
SV=1
Length = 356
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 143/347 (41%), Gaps = 72/347 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 161
Query: 308 VSTLLHQN------------PRKDKPPSSFPQAYGGQNFHSPPA--PMADMHPLGNSSWP 353
+ ++ + P + P SS GGQ+ S A P A H L P
Sbjct: 162 ICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT-HDL--EGPP 218
Query: 354 ARNSSLHGMPS-TPWMGGYGDQPSR-----------MGSGSINSCPPGQMG-----EVSA 396
S+ G + +P +Q +R G I+S P G + S
Sbjct: 219 LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDAST 278
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ + ++ IG +IG+ G N+ +++Q +GA I + + S R
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGR 325
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTERAITIAG 150
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSA 333
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 334 ASISLAQYLINARLSSEKGM 353
Score = 37.0 bits (84), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE-DAPTDSDERVIRASAFEGLWNP 456
+++++ A + G +IGKGG +K++++ TGA + V D +S ER I G+
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAI---TIAGVPQS 154
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITTRLLVP---SSKVGCILGQ 497
++ + I + +T S +G + T P SS V C GQ
Sbjct: 155 VTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
>sp|P60335|PCBP1_MOUSE Poly(rC)-binding protein 1 OS=Mus musculus GN=Pcbp1 PE=1 SV=1
Length = 356
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 143/347 (41%), Gaps = 72/347 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 161
Query: 308 VSTLLHQN------------PRKDKPPSSFPQAYGGQNFHSPPA--PMADMHPLGNSSWP 353
+ ++ + P + P SS GGQ+ S A P A H L P
Sbjct: 162 ICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT-HDL--EGPP 218
Query: 354 ARNSSLHGMPS-TPWMGGYGDQPSR-----------MGSGSINSCPPGQMG-----EVSA 396
S+ G + +P +Q +R G I+S P G + S
Sbjct: 219 LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDAST 278
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ + ++ IG +IG+ G N+ +++Q +GA I + + S R
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGR 325
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTERAITIAG 150
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSA 333
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 334 ASISLAQYLINARLSSEKGM 353
Score = 37.0 bits (84), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE-DAPTDSDERVIRASAFEGLWNP 456
+++++ A + G +IGKGG +K++++ TGA + V D +S ER I G+
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAI---TIAGVPQS 154
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITTRLLVP---SSKVGCILGQ 497
++ + I + +T S +G + T P SS V C GQ
Sbjct: 155 VTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
>sp|Q15365|PCBP1_HUMAN Poly(rC)-binding protein 1 OS=Homo sapiens GN=PCBP1 PE=1 SV=2
Length = 356
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 143/347 (41%), Gaps = 72/347 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 161
Query: 308 VSTLLHQN------------PRKDKPPSSFPQAYGGQNFHSPPA--PMADMHPLGNSSWP 353
+ ++ + P + P SS GGQ+ S A P A H L P
Sbjct: 162 ICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT-HDL--EGPP 218
Query: 354 ARNSSLHGMPS-TPWMGGYGDQPSR-----------MGSGSINSCPPGQMG-----EVSA 396
S+ G + +P +Q +R G I+S P G + S
Sbjct: 219 LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDAST 278
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ + ++ IG +IG+ G N+ +++Q +GA I + + S R
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGR 325
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTERAITIAG 150
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSA 333
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 334 ASISLAQYLINARLSSEKGM 353
Score = 37.0 bits (84), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE-DAPTDSDERVIRASAFEGLWNP 456
+++++ A + G +IGKGG +K++++ TGA + V D +S ER I G+
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAI---TIAGVPQS 154
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITTRLLVP---SSKVGCILGQ 497
++ + I + +T S +G + T P SS V C GQ
Sbjct: 155 VTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
>sp|Q5E9A3|PCBP1_BOVIN Poly(rC)-binding protein 1 OS=Bos taurus GN=PCBP1 PE=2 SV=1
Length = 356
Score = 68.6 bits (166), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 87/347 (25%), Positives = 143/347 (41%), Gaps = 72/347 (20%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKRIREESGARINISE---GNCPERIITLTGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ATQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLPN---STERAITIAGVPQSVTECVKQ 161
Query: 308 VSTLLHQN------------PRKDKPPSSFPQAYGGQNFHSPPA--PMADMHPLGNSSWP 353
+ ++ + P + P SS GGQ+ S A P A H L P
Sbjct: 162 ICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQDRCSDAAGYPHAT-HDL--EGPP 218
Query: 354 ARNSSLHGMPS-TPWMGGYGDQPSR-----------MGSGSINSCPPGQMG-----EVSA 396
S+ G + +P +Q +R G I+S P G + S
Sbjct: 219 LDAYSIQGQHTISPLDLAKLNQVARQQSHFAMMHGGTGFAGIDSSSPEVKGYWASLDAST 278
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ + ++ IG +IG+ G N+ +++Q +GA I + + S R
Sbjct: 279 QTTHELTIPNNLIGCIIGRQGANINEIRQMSGAQIKIANPVEGSSGR 325
Score = 64.3 bits (155), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 82/149 (55%), Gaps = 12/149 (8%)
Query: 394 VSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEG 452
++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I +
Sbjct: 10 LNVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINISEG--NCPERIITLTGPTNA 67
Query: 453 LWNPRSQTIDAILQLQNKTSEFSEKGT---ITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
++ + ID + + N + S + +T RL+VP+++ G ++G+GG I E+R T
Sbjct: 68 IFKAFAMIIDKLEEDINSSMTNSTAASRPPVTLRLVVPATQCGSLIGKGGCKIKEIREST 127
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
A ++V G D P S+E + I G
Sbjct: 128 GAQVQVAG------DMLPNSTERAITIAG 150
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++R+R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKRIREESGARINI 49
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 7/80 (8%)
Query: 481 TTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSS 540
T L +P++ +GCI+G+ G INE+R+ + GA++K+ +P GSS V I GS+
Sbjct: 281 THELTIPNNLIGCIIGRQGANINEIRQMS-------GAQIKIANPVEGSSGRQVTITGSA 333
Query: 541 EHLISAHGTYQSFMTSGQSM 560
+ A + ++S + M
Sbjct: 334 ASISLAQYLINARLSSEKGM 353
Score = 37.0 bits (84), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 52/104 (50%), Gaps = 7/104 (6%)
Query: 398 FSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE-DAPTDSDERVIRASAFEGLWNP 456
+++++ A + G +IGKGG +K++++ TGA + V D +S ER I G+
Sbjct: 98 VTLRLVVPATQCGSLIGKGGCKIKEIRESTGAQVQVAGDMLPNSTERAI---TIAGVPQS 154
Query: 457 RSQTIDAILQLQNKTSEFSEKGTITTRLLVP---SSKVGCILGQ 497
++ + I + +T S +G + T P SS V C GQ
Sbjct: 155 VTECVKQICLVMLETLSQSPQGRVMTIPYQPMPASSPVICAGGQ 198
>sp|P57723|PCBP4_HUMAN Poly(rC)-binding protein 4 OS=Homo sapiens GN=PCBP4 PE=2 SV=1
Length = 403
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 78/321 (24%), Positives = 135/321 (42%), Gaps = 60/321 (18%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ + +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGNVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSL-----HGMP 363
++ ++P K P G S + G + PA + L H +P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYG-AVTPAEVTKLQQLSSHAVP 225
Query: 364 -STPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQ 422
+TP + + PG + S + L IG VIG+ G + +
Sbjct: 226 FATPSV--------------VPGLDPG-----TQTSSQEFLVPNDLIGCVIGRQGSKISE 266
Query: 423 LQQETGASIHVEDAPTDSDER 443
++Q +GA I + + + ER
Sbjct: 267 IRQMSGAHIKIGNQAEGAGER 287
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 78/183 (42%), Gaps = 28/183 (15%)
Query: 121 GNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA-DTIPGSEERVIIIYS 179
GN R++ P+ + G +IGKAG +K +RE T A++ VA D +P S ER + +
Sbjct: 95 GNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAVTVSG 154
Query: 180 SPTKIAKTQNKDDDSAAETKKESM----EPHCAAQDALLKVHDRIIEEDLFGGMASDD-- 233
P I + E+ + P + LL + + +G + +
Sbjct: 155 VPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVT 214
Query: 234 ---------------------DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGAN 272
D T + LVPN+++GC++G++G I +R +GA+
Sbjct: 215 KLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQMSGAH 274
Query: 273 IRV 275
I++
Sbjct: 275 IKI 277
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
Score = 38.9 bits (89), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 72/224 (32%)
Query: 388 PGQMGEVS-AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE-DAPTDSDER-- 443
P G VS +++++ A + G +IGK G +K++++ TGA + V D +S ER
Sbjct: 91 PANGGNVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAV 150
Query: 444 ------------------VIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG------- 478
VI S +G P ++ L + FS +G
Sbjct: 151 TVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTP 210
Query: 479 ------------------------------TITTRLLVPSSKVGCILGQGGHVINEMRRR 508
T + LVP+ +GC++G+ G I+E+R+
Sbjct: 211 AEVTKLQQLSSHAVPFATPSVVPGLDPGTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQM 270
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGS------SEHLISA 546
+ GA +K+ + G+ E V I GS +++LI+A
Sbjct: 271 S-------GAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITA 307
Score = 37.0 bits (84), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 133 LCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ 188
L P+ IG VIG+ G+ + +R+ + A I + + G+ ER + I SP IA Q
Sbjct: 247 LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQ 302
Score = 36.2 bits (82), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
GG+ ++ + T+T R+L+ VG ++GK+G+ ++R+R ++ A I +
Sbjct: 6 GGL-EEEPELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI 53
>sp|P57724|PCBP4_MOUSE Poly(rC)-binding protein 4 OS=Mus musculus GN=Pcbp4 PE=2 SV=1
Length = 403
Score = 68.2 bits (165), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 81/329 (24%), Positives = 134/329 (40%), Gaps = 76/329 (23%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS-EERVIIIYSSPTKIAKTQ 188
R+L +++G +IGK G VK +RE++ A+IT+++ GS ER+ I S +
Sbjct: 20 LRMLMHGKEVGSIIGKKGETVKRIREQSSARITISE---GSCPERITTITGSTAAVF--- 73
Query: 189 NKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPN 248
H + A ++EDL A+ +T RL++P
Sbjct: 74 -----------------HAVSMIAFK------LDEDLCAAPANGGSVSRPPVTLRLVIPA 110
Query: 249 NMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEV 308
+ G L+GK G I+ +R TGA ++V D LP +T+ V +SG P+ + ++
Sbjct: 111 SQCGSLIGKAGTKIKEIRETTGAQVQVA-GDLLP---NSTERAVTVSGVPDAIILCVRQI 166
Query: 309 STLLHQNPRKDKPPSSFP------------QAYG--GQNFHSPPAPMADMHPLGNSSWPA 354
++ ++P K P Q + GQ PA + + L + P
Sbjct: 167 CAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTPAEVTKLQQLSGHAVPF 226
Query: 355 RNSSLHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIG 414
+ S+ P M PS S S EF L IG VIG
Sbjct: 227 ASPSV-----VPGM-----DPSTQTS--------------SQEF----LVPNDLIGCVIG 258
Query: 415 KGGFNVKQLQQETGASIHVEDAPTDSDER 443
+ G + +++Q +GA I + + + ER
Sbjct: 259 RQGSKISEIRQMSGAHIKIGNQAEGAGER 287
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 78/157 (49%), Gaps = 14/157 (8%)
Query: 393 EVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-----A 447
E+S ++++L ++G +IGK G VK++++++ A I + + ER+ A
Sbjct: 13 ELSITLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITISEG--SCPERITTITGSTA 70
Query: 448 SAFEGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
+ F + + + +D L + +T RL++P+S+ G ++G+ G I E+R
Sbjct: 71 AVFHAV-SMIAFKLDEDLCAAPANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRE 129
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
T A ++V G D P S+E V + G + +I
Sbjct: 130 TTGAQVQVAG------DLLPNSTERAVTVSGVPDAII 160
Score = 38.9 bits (89), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 51/224 (22%), Positives = 88/224 (39%), Gaps = 72/224 (32%)
Query: 388 PGQMGEVS-AEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVE-DAPTDSDER-- 443
P G VS +++++ A + G +IGK G +K++++ TGA + V D +S ER
Sbjct: 91 PANGGSVSRPPVTLRLVIPASQCGSLIGKAGTKIKEIRETTGAQVQVAGDLLPNSTERAV 150
Query: 444 ------------------VIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEKG------- 478
VI S +G P ++ L + FS +G
Sbjct: 151 TVSGVPDAIILCVRQICAVILESPPKGATIPYHPSLSLGTVLLSANQGFSVQGQYGAVTP 210
Query: 479 ------------------------------TITTRLLVPSSKVGCILGQGGHVINEMRRR 508
T + LVP+ +GC++G+ G I+E+R+
Sbjct: 211 AEVTKLQQLSGHAVPFASPSVVPGMDPSTQTSSQEFLVPNDLIGCVIGRQGSKISEIRQM 270
Query: 509 TQADIRVVGARVKLQDPHPGSSECIVDIRGS------SEHLISA 546
+ GA +K+ + G+ E V I GS +++LI+A
Sbjct: 271 S-------GAHIKIGNQAEGAGERHVTITGSPVSIALAQYLITA 307
Score = 37.0 bits (84), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 31/56 (55%)
Query: 133 LCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQ 188
L P+ IG VIG+ G+ + +R+ + A I + + G+ ER + I SP IA Q
Sbjct: 247 LVPNDLIGCVIGRQGSKISEIRQMSGAHIKIGNQAEGAGERHVTITGSPVSIALAQ 302
Score = 35.8 bits (81), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/37 (35%), Positives = 26/37 (70%)
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
T+T R+L+ VG ++GK+G+ ++R+R ++ A I +
Sbjct: 17 TLTLRMLMHGKEVGSIIGKKGETVKRIREQSSARITI 53
>sp|Q15366|PCBP2_HUMAN Poly(rC)-binding protein 2 OS=Homo sapiens GN=PCBP2 PE=1 SV=1
Length = 365
Score = 67.8 bits (164), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 98/220 (44%), Gaps = 49/220 (22%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNK 190
R+L +++G +IGK G VK +REE+ A+I +++ G+ II + PT
Sbjct: 17 RLLMHGKEVGSIIGKKGESVKKMREESGARINISE---GNCPERIITLAGPT-------- 65
Query: 191 DDDSAAETKKESMEPHCAAQDALLKVHDRII---EEDLFGGMASDDDNENSTITARLLVP 247
+A+ K II EED+ M + +T RL+VP
Sbjct: 66 --------------------NAIFKAFAMIIDKLEEDISSSMTNSTAASRPPVTLRLVVP 105
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYE 307
+ G L+GK G I+ +R TGA ++V D LP +T+ + I+G P + +
Sbjct: 106 ASQCGSLIGKGGCKIKEIRESTGAQVQV-AGDMLP---NSTERAITIAGIPQSIIECVKQ 161
Query: 308 VSTLLHQNPRKDKP----------PSSFPQAY-GGQNFHS 336
+ ++ + + P PSS P + GGQ+ +S
Sbjct: 162 ICVVMLETLSQSPPKGVTIPYRPKPSSSPVIFAGGQDRYS 201
Score = 67.8 bits (164), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 88/159 (55%), Gaps = 16/159 (10%)
Query: 392 GEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIR-ASAF 450
G ++ ++++L ++G +IGK G +VK++++E+GA I++ + + ER+I A
Sbjct: 8 GGLNVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINISEG--NCPERIITLAGPT 65
Query: 451 EGLWNPRSQTIDAILQ-----LQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEM 505
++ + ID + + + N T+ + + +T RL+VP+S+ G ++G+GG I E+
Sbjct: 66 NAIFKAFAMIIDKLEEDISSSMTNSTA--ASRPPVTLRLVVPASQCGSLIGKGGCKIKEI 123
Query: 506 RRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
R T A ++V G D P S+E + I G + +I
Sbjct: 124 RESTGAQVQVAG------DMLPNSTERAITIAGIPQSII 156
Score = 41.2 bits (95), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 7/65 (10%)
Query: 479 TITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRG 538
T + L +P+ +GCI+G+ G INE+R+ + GA++K+ +P GS++ V I G
Sbjct: 287 TTSHELTIPNDLIGCIIGRQGAKINEIRQMS-------GAQIKIANPVEGSTDRQVTITG 339
Query: 539 SSEHL 543
S+ +
Sbjct: 340 SAASI 344
Score = 40.8 bits (94), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 28/39 (71%)
Query: 237 NSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
N T+T RLL+ VG ++GK+G+ ++++R E+GA I +
Sbjct: 11 NVTLTIRLLMHGKEVGSIIGKKGESVKKMREESGARINI 49
>sp|O19049|HNRPK_RABIT Heterogeneous nuclear ribonucleoprotein K OS=Oryctolagus cuniculus
GN=HNRNPK PE=2 SV=1
Length = 463
Score = 63.5 bits (153), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 98/218 (44%), Gaps = 22/218 (10%)
Query: 117 EQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
EQ+F S+ D + RIL S+ G VIGK G +K+LR + A ++V D+ ER+
Sbjct: 30 EQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERI 87
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESME---PHCAAQDALLKVHDRIIEEDLFGGMAS 231
+ I + I + K T +E ++ P +Q L + F G S
Sbjct: 88 LSISADIETIGEILKK----IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKG--S 141
Query: 232 DDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEM 291
D D E RLL+ ++ G ++G +G I+ LR T I++ C +TD +
Sbjct: 142 DFDCE-----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRV 192
Query: 292 VQISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAY 329
V I GKP+ + + L+ ++P K + P Y
Sbjct: 193 VLIGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFY 230
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA---------- 449
++IL + G VIGKGG N+K L+ + AS+ V D + ER++ SA
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPD--SSGPERILSISADIETIGEILK 102
Query: 450 ------FEGLWNP----------RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGC 493
EGL P S ++ + K S+F RLL+ S G
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHFKGSDFD----CELRLLIHQSLAGG 158
Query: 494 ILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I+G G I E+R TQ I++ Q+ P S++ +V I G + ++
Sbjct: 159 IIGVKGAKIKELRENTQTTIKL------FQECCPHSTDRVVLIGGKPDRVV 203
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
++S + S+G+ ++ P G +IGK G +K +R E+ A I + + + G
Sbjct: 370 DYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 170 SEERVIIIYSSPTKIAKTQ 188
SE+R+I I + +I Q
Sbjct: 430 SEDRIITITGTQDQIQNAQ 448
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GG S D IT ++ +P ++ G ++GK G I+++R E+GA+I++ P
Sbjct: 375 GGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEG 429
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+ D ++ I+G + + A Y + + Q
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVKQ 457
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
ITT++ +P G I+G+GG I ++R + GA +K+ +P GS + I+ I G+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHES-------GASIKIDEPLEGSEDRIITITGT 440
Query: 540 SEHLISAHGTYQS 552
+ + +A Q+
Sbjct: 441 QDQIQNAQYLLQN 453
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGKGG +KQ++ E+GASI +++ S++R+I + + Q +A LQN
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQN 453
Query: 470 KTSEFSEK 477
++S K
Sbjct: 454 SVKQYSGK 461
>sp|Q3T0D0|HNRPK_BOVIN Heterogeneous nuclear ribonucleoprotein K OS=Bos taurus GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 117 EQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
EQ+F S+ D + RIL S+ G VIGK G +K+LR + A ++V D+ ER+
Sbjct: 30 EQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERI 87
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDD 233
+ I + I + K T +E ++ P A L D + + SD
Sbjct: 88 LSISADIETIGEILKK----IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF 143
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
D E RLL+ ++ G ++G +G I+ LR T I++ C +TD +V
Sbjct: 144 DCE-----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPQSTDRVVL 194
Query: 294 ISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAY 329
I GKP+ + + L+ ++P K + P Y
Sbjct: 195 IGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFY 230
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA---------- 449
++IL + G VIGKGG N+K L+ + AS+ V D + ER++ SA
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPD--SSGPERILSISADIETIGEILK 102
Query: 450 ------FEGLWNP----------RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGC 493
EGL P S ++ + K S+F RLL+ S G
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD----CELRLLIHQSLAGG 158
Query: 494 ILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I+G G I E+R TQ I++ Q+ P S++ +V I G + ++
Sbjct: 159 IIGVKGAKIKELRENTQTTIKL------FQECCPQSTDRVVLIGGKPDRVV 203
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
++S + S+G+ ++ P G +IGK G +K +R E+ A I + + + G
Sbjct: 370 DYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 170 SEERVIIIYSSPTKIAKTQ 188
SE+R+I I + +I Q
Sbjct: 430 SEDRIITITGTQDQIQNAQ 448
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
ITT++ +P G I+G+GG I ++R + GA +K+ +P GS + I+ I G+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHES-------GASIKIDEPLEGSEDRIITITGT 440
Query: 540 SEHLISAHGTYQS 552
+ + +A Q+
Sbjct: 441 QDQIQNAQYLLQN 453
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GG S D IT ++ +P ++ G ++GK G I+++R E+GA+I++ P
Sbjct: 375 GGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEG 429
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+ D ++ I+G + + A Y + + Q
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVKQ 457
Score = 40.4 bits (93), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGKGG +KQ++ E+GASI +++ S++R+I + + Q +A LQN
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQN 453
Query: 470 KTSEFSE 476
++++
Sbjct: 454 SVKQYAD 460
>sp|P61980|HNRPK_RAT Heterogeneous nuclear ribonucleoprotein K OS=Rattus norvegicus
GN=Hnrnpk PE=1 SV=1
Length = 463
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 117 EQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
EQ+F S+ D + RIL S+ G VIGK G +K+LR + A ++V D+ ER+
Sbjct: 30 EQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERI 87
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDD 233
+ I + I + K T +E ++ P A L D + + SD
Sbjct: 88 LSISADIETIGEILKK----IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF 143
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
D E RLL+ ++ G ++G +G I+ LR T I++ C +TD +V
Sbjct: 144 DCE-----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVL 194
Query: 294 ISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAY 329
I GKP+ + + L+ ++P K + P Y
Sbjct: 195 IGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFY 230
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA---------- 449
++IL + G VIGKGG N+K L+ + AS+ V D + ER++ SA
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPD--SSGPERILSISADIETIGEILK 102
Query: 450 ------FEGLWNP----------RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGC 493
EGL P S ++ + K S+F RLL+ S G
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD----CELRLLIHQSLAGG 158
Query: 494 ILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I+G G I E+R TQ I++ Q+ P S++ +V I G + ++
Sbjct: 159 IIGVKGAKIKELRENTQTTIKL------FQECCPHSTDRVVLIGGKPDRVV 203
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
++S + S+G+ ++ P G +IGK G +K +R E+ A I + + + G
Sbjct: 370 DYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 170 SEERVIIIYSSPTKIAKTQ 188
SE+R+I I + +I Q
Sbjct: 430 SEDRIITITGTQDQIQNAQ 448
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GG S D IT ++ +P ++ G ++GK G I+++R E+GA+I++ P
Sbjct: 375 GGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEG 429
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+ D ++ I+G + + A Y + + Q
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVKQ 457
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
ITT++ +P G I+G+GG I ++R + GA +K+ +P GS + I+ I G+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHES-------GASIKIDEPLEGSEDRIITITGT 440
Query: 540 SEHLISAHGTYQS 552
+ + +A Q+
Sbjct: 441 QDQIQNAQYLLQN 453
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGKGG +KQ++ E+GASI +++ S++R+I + + Q +A LQN
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQN 453
Query: 470 KTSEFSEK 477
++S K
Sbjct: 454 SVKQYSGK 461
>sp|P61979|HNRPK_MOUSE Heterogeneous nuclear ribonucleoprotein K OS=Mus musculus GN=Hnrnpk
PE=1 SV=1
Length = 463
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 117 EQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
EQ+F S+ D + RIL S+ G VIGK G +K+LR + A ++V D+ ER+
Sbjct: 30 EQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERI 87
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDD 233
+ I + I + K T +E ++ P A L D + + SD
Sbjct: 88 LSISADIETIGEILKK----IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF 143
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
D E RLL+ ++ G ++G +G I+ LR T I++ C +TD +V
Sbjct: 144 DCE-----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVL 194
Query: 294 ISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAY 329
I GKP+ + + L+ ++P K + P Y
Sbjct: 195 IGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFY 230
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA---------- 449
++IL + G VIGKGG N+K L+ + AS+ V D + ER++ SA
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPD--SSGPERILSISADIETIGEILK 102
Query: 450 ------FEGLWNP----------RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGC 493
EGL P S ++ + K S+F RLL+ S G
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD----CELRLLIHQSLAGG 158
Query: 494 ILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I+G G I E+R TQ I++ Q+ P S++ +V I G + ++
Sbjct: 159 IIGVKGAKIKELRENTQTTIKL------FQECCPHSTDRVVLIGGKPDRVV 203
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
++S + S+G+ ++ P G +IGK G +K +R E+ A I + + + G
Sbjct: 370 DYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 170 SEERVIIIYSSPTKIAKTQ 188
SE+R+I I + +I Q
Sbjct: 430 SEDRIITITGTQDQIQNAQ 448
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GG S D IT ++ +P ++ G ++GK G I+++R E+GA+I++ P
Sbjct: 375 GGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEG 429
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+ D ++ I+G + + A Y + + Q
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVKQ 457
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
ITT++ +P G I+G+GG I ++R + GA +K+ +P GS + I+ I G+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHES-------GASIKIDEPLEGSEDRIITITGT 440
Query: 540 SEHLISAHGTYQS 552
+ + +A Q+
Sbjct: 441 QDQIQNAQYLLQN 453
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGKGG +KQ++ E+GASI +++ S++R+I + + Q +A LQN
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQN 453
Query: 470 KTSEFSEK 477
++S K
Sbjct: 454 SVKQYSGK 461
>sp|P61978|HNRPK_HUMAN Heterogeneous nuclear ribonucleoprotein K OS=Homo sapiens GN=HNRNPK
PE=1 SV=1
Length = 463
Score = 62.4 bits (150), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 117 EQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
EQ+F S+ D + RIL S+ G VIGK G +K+LR + A ++V D+ ER+
Sbjct: 30 EQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERI 87
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDD 233
+ I + I + K T +E ++ P A L D + + SD
Sbjct: 88 LSISADIETIGEILKK----IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF 143
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
D E RLL+ ++ G ++G +G I+ LR T I++ C +TD +V
Sbjct: 144 DCE-----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVL 194
Query: 294 ISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAY 329
I GKP+ + + L+ ++P K + P Y
Sbjct: 195 IGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFY 230
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA---------- 449
++IL + G VIGKGG N+K L+ + AS+ V D + ER++ SA
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPD--SSGPERILSISADIETIGEILK 102
Query: 450 ------FEGLWNP----------RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGC 493
EGL P S ++ + K S+F RLL+ S G
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD----CELRLLIHQSLAGG 158
Query: 494 ILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I+G G I E+R TQ I++ Q+ P S++ +V I G + ++
Sbjct: 159 IIGVKGAKIKELRENTQTTIKL------FQECCPHSTDRVVLIGGKPDRVV 203
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
++S + S+G+ ++ P G +IGK G +K +R E+ A I + + + G
Sbjct: 370 DYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 170 SEERVIIIYSSPTKIAKTQ 188
SE+R+I I + +I Q
Sbjct: 430 SEDRIITITGTQDQIQNAQ 448
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GG S D IT ++ +P ++ G ++GK G I+++R E+GA+I++ P
Sbjct: 375 GGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEG 429
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+ D ++ I+G + + A Y + + Q
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVKQ 457
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
ITT++ +P G I+G+GG I ++R + GA +K+ +P GS + I+ I G+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHES-------GASIKIDEPLEGSEDRIITITGT 440
Query: 540 SEHLISAHGTYQS 552
+ + +A Q+
Sbjct: 441 QDQIQNAQYLLQN 453
Score = 41.6 bits (96), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGKGG +KQ++ E+GASI +++ S++R+I + + Q +A LQN
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQN 453
Query: 470 KTSEFSEK 477
++S K
Sbjct: 454 SVKQYSGK 461
>sp|Q5R5H8|HNRPK_PONAB Heterogeneous nuclear ribonucleoprotein K OS=Pongo abelii GN=HNRNPK
PE=2 SV=1
Length = 464
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 117 EQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
EQ+F S+ D + RIL S+ G VIGK G +K+LR + A ++V D+ ER+
Sbjct: 30 EQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERI 87
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDD 233
+ I + I + K T +E ++ P A L D + + SD
Sbjct: 88 LSISADIETIGEILKK----IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF 143
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
D E RLL+ ++ G ++G +G I+ LR T I++ C +TD +V
Sbjct: 144 DCE-----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVL 194
Query: 294 ISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAY 329
I GKP+ + + L+ ++P K + P Y
Sbjct: 195 IGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFY 230
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA---------- 449
++IL + G VIGKGG N+K L+ + AS+ V D + ER++ SA
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPD--SSGPERILSISADIETIGEILK 102
Query: 450 ------FEGLWNP----------RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGC 493
EGL P S ++ + K S+F RLL+ S G
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD----CELRLLIHQSLAGG 158
Query: 494 ILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I+G G I E+R TQ I++ Q+ P S++ +V I G + ++
Sbjct: 159 IIGVKGAKIKELRENTQTTIKL------FQECCPHSTDRVVLIGGKPDRVV 203
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
++S + S+G+ ++ P G +IGK G +K +R E+ A I + + + G
Sbjct: 370 DYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 170 SEERVIIIYSSPTKIAKTQ 188
SE+R+I I + +I Q
Sbjct: 430 SEDRIITITGTQDQIQNAQ 448
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GG S D IT ++ +P ++ G ++GK G I+++R E+GA+I++ P
Sbjct: 375 GGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEG 429
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+ D ++ I+G + + A Y + + Q
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVKQ 457
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
ITT++ +P G I+G+GG I ++R + GA +K+ +P GS + I+ I G+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHES-------GASIKIDEPLEGSEDRIITITGT 440
Query: 540 SEHLISAHGTYQS 552
+ + +A Q+
Sbjct: 441 QDQIQNAQYLLQN 453
Score = 40.4 bits (93), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGKGG +KQ++ E+GASI +++ S++R+I + + Q +A LQN
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQN 453
Query: 470 KTSEFSE 476
++++
Sbjct: 454 SVKQYAD 460
>sp|Q4R4M6|HNRPK_MACFA Heterogeneous nuclear ribonucleoprotein K OS=Macaca fascicularis
GN=HNRNPK PE=2 SV=1
Length = 464
Score = 62.0 bits (149), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 97/216 (44%), Gaps = 18/216 (8%)
Query: 117 EQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
EQ+F S+ D + RIL S+ G VIGK G +K+LR + A ++V D+ ER+
Sbjct: 30 EQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERI 87
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESME-PHCAAQDALLKVHDRIIEEDLFGGMASDD 233
+ I + I + K T +E ++ P A L D + + SD
Sbjct: 88 LSISADIETIGEILKK----IIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDF 143
Query: 234 DNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQ 293
D E RLL+ ++ G ++G +G I+ LR T I++ C +TD +V
Sbjct: 144 DCE-----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVL 194
Query: 294 ISGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAY 329
I GKP+ + + L+ ++P K + P Y
Sbjct: 195 IGGKPDRVVECIKIILDLISESPIKGRAQPYDPNFY 230
Score = 50.1 bits (118), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 74/171 (43%), Gaps = 38/171 (22%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA---------- 449
++IL + G VIGKGG N+K L+ + AS+ V D + ER++ SA
Sbjct: 45 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPD--SSGPERILSISADIETIGEILK 102
Query: 450 ------FEGLWNP----------RSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGC 493
EGL P S ++ + K S+F RLL+ S G
Sbjct: 103 KIIPTLEEGLQLPSPTATSQLPLESDAVECLNYQHYKGSDFD----CELRLLIHQSLAGG 158
Query: 494 ILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLI 544
I+G G I E+R TQ I++ Q+ P S++ +V I G + ++
Sbjct: 159 IIGVKGAKIKELRENTQTTIKL------FQECCPHSTDRVVLIGGKPDRVV 203
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
++S + S+G+ ++ P G +IGK G +K +R E+ A I + + + G
Sbjct: 370 DYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 429
Query: 170 SEERVIIIYSSPTKIAKTQ 188
SE+R+I I + +I Q
Sbjct: 430 SEDRIITITGTQDQIQNAQ 448
Score = 42.7 bits (99), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GG S D IT ++ +P ++ G ++GK G I+++R E+GA+I++ P
Sbjct: 375 GGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEG 429
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+ D ++ I+G + + A Y + + Q
Sbjct: 430 SEDRIITITGTQDQIQNAQYLLQNSVKQ 457
Score = 42.4 bits (98), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
ITT++ +P G I+G+GG I ++R + GA +K+ +P GS + I+ I G+
Sbjct: 388 ITTQVTIPKDLAGSIIGKGGQRIKQIRHES-------GASIKIDEPLEGSEDRIITITGT 440
Query: 540 SEHLISAHGTYQS 552
+ + +A Q+
Sbjct: 441 QDQIQNAQYLLQN 453
Score = 40.4 bits (93), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGKGG +KQ++ E+GASI +++ S++R+I + + Q +A LQN
Sbjct: 400 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQN 453
Query: 470 KTSEFSE 476
++++
Sbjct: 454 SVKQYAD 460
>sp|O74919|RNC1_SCHPO RNA-binding protein rnc1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=rnc1 PE=1 SV=1
Length = 398
Score = 58.9 bits (141), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/316 (21%), Positives = 132/316 (41%), Gaps = 55/316 (17%)
Query: 130 YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQN 189
R L +R+ G +IGKAG V LR T K V +P +RV+ I S P
Sbjct: 96 LRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTI-SGPL------- 147
Query: 190 KDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD----NENSTITARLL 245
+ +++ + II D+F +++ D + N+ RLL
Sbjct: 148 ---------------------ENVVRAYRFII--DIFAKNSTNPDGTPSDANTPRKLRLL 184
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
+ ++++G ++G+ G I+ ++ + + + D LP +T+ V+I G + A+
Sbjct: 185 IAHSLMGSIIGRNGLRIKLIQDKCSCRM-IASKDMLP---QSTERTVEIHGTVDNLHAAI 240
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP-LGNSSWPARNSSLHGMPS 364
+E+ L + + G F++P + + P L +++ P + S P+
Sbjct: 241 WEIGKCLIDDWERG----------AGTVFYNPVSRLTQPLPSLASTASPQQVSP----PA 286
Query: 365 TPWMGGYGDQPSRMGSGSINSCPPGQMGEVSA-EFSMKILCSAGKIGGVIGKGGFNVKQL 423
P P S P QM + + + I A +G +IG+GG + ++
Sbjct: 287 APSTTSGEAIPENFVSYGAQVFPATQMPFLQQPKVTQNISIPADMVGCIIGRGGSKISEI 346
Query: 424 QQETGASIHVEDAPTD 439
++ +G+ I + P D
Sbjct: 347 RRTSGSKISIAKEPHD 362
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 6/69 (8%)
Query: 474 FSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECI 533
F ++ +T + +P+ VGCI+G+GG I+E+RR + + I + ++PH + E +
Sbjct: 315 FLQQPKVTQNISIPADMVGCIIGRGGSKISEIRRTSGSKISIA------KEPHDETGERM 368
Query: 534 VDIRGSSEH 542
I G+ E
Sbjct: 369 FTITGTHEE 377
Score = 42.7 bits (99), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 73/155 (47%), Gaps = 13/155 (8%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWN 455
+ +++ L S + G +IGK G NV +L+ T V A + +RV+ S E +
Sbjct: 93 QLTLRALLSTREAGIIIGKAGKNVAELRSTTNVKAGVTKAVPNVHDRVLTISGPLENVVR 152
Query: 456 PRSQTIDAILQLQNKTSEFSEKGTITT----RLLVPSSKVGCILGQGGHVINEMRRRTQA 511
ID + +N T+ T RLL+ S +G I+G+ G I ++ +
Sbjct: 153 AYRFIID--IFAKNSTNPDGTPSDANTPRKLRLLIAHSLMGSIIGRNGLRIKLIQDK--C 208
Query: 512 DIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISA 546
R++ ++ D P S+E V+I G+ ++L +A
Sbjct: 209 SCRMIASK----DMLPQSTERTVEIHGTVDNLHAA 239
>sp|Q5ZIQ3|HNRPK_CHICK Heterogeneous nuclear ribonucleoprotein K OS=Gallus gallus
GN=HNRNPK PE=2 SV=1
Length = 427
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 92/215 (42%), Gaps = 40/215 (18%)
Query: 117 EQSFGNSQPADTV--YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERV 174
EQ+F S+ D + RIL S+ G VIGK G +K+LR + A ++V D+ ER+
Sbjct: 27 EQAFKRSRNTDEMVELRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDS--SGPERI 84
Query: 175 IIIYSSPTKIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDD 234
+ I + I + L K+ + E + G SD D
Sbjct: 85 LSISADTETIGEI-------------------------LKKIIPTLEEYQHYKG--SDFD 117
Query: 235 NENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQI 294
E RLL+ ++ G ++G +G I+ LR T I++ C +TD +V I
Sbjct: 118 CE-----LRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKLFQE----CCPHSTDRVVLI 168
Query: 295 SGKPNVAKRALYEVSTLLHQNPRKDKPPSSFPQAY 329
GKP+ + + L+ ++P K + P Y
Sbjct: 169 GGKPDRVVECIKIILDLISESPIKGRAQPYDPNFY 203
Score = 55.1 bits (131), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 14/147 (9%)
Query: 400 MKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASA-FEGLWNPRS 458
++IL + G VIGKGG N+K L+ + AS+ V D+ ER++ SA E +
Sbjct: 42 LRILLQSKNAGAVIGKGGKNIKALRTDYNASVSVPDSS--GPERILSISADTETIGEILK 99
Query: 459 QTIDAILQLQN-KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVG 517
+ I + + Q+ K S+F RLL+ S G I+G G I E+R TQ I++
Sbjct: 100 KIIPTLEEYQHYKGSDFD----CELRLLIHQSLAGGIIGVKGAKIKELRENTQTTIKL-- 153
Query: 518 ARVKLQDPHPGSSECIVDIRGSSEHLI 544
Q+ P S++ +V I G + ++
Sbjct: 154 ----FQECCPHSTDRVVLIGGKPDRVV 176
Score = 43.1 bits (100), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 40/79 (50%)
Query: 110 NWSNSSREQSFGNSQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPG 169
++S + S+G+ ++ P G +IGK G +K +R E+ A I + + + G
Sbjct: 334 DYSYAGGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKIDEPLEG 393
Query: 170 SEERVIIIYSSPTKIAKTQ 188
SE+R+I I + +I Q
Sbjct: 394 SEDRIITITGTQDQIQNAQ 412
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 7/73 (9%)
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS 539
ITT++ +P G I+G+GG I ++R + GA +K+ +P GS + I+ I G+
Sbjct: 352 ITTQVTIPKDLAGSIIGKGGQRIKQIRHES-------GASIKIDEPLEGSEDRIITITGT 404
Query: 540 SEHLISAHGTYQS 552
+ + +A Q+
Sbjct: 405 QDQIQNAQYLLQN 417
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 227 GGMASDDDNENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAM 286
GG S D IT ++ +P ++ G ++GK G I+++R E+GA+I++ P
Sbjct: 339 GGRGSYGDLGGPIITTQVTIPKDLAGSIIGKGGQRIKQIRHESGASIKI-----DEPLEG 393
Query: 287 NTDEMVQISGKPNVAKRALYEVSTLLHQ 314
+ D ++ I+G + + A Y + + Q
Sbjct: 394 SEDRIITITGTQDQIQNAQYLLQNSVKQ 421
Score = 41.6 bits (96), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 39/68 (57%), Gaps = 6/68 (8%)
Query: 410 GGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQN 469
G +IGKGG +KQ++ E+GASI +++ S++R+I + + Q +A LQN
Sbjct: 364 GSIIGKGGQRIKQIRHESGASIKIDEPLEGSEDRIITITGTQ------DQIQNAQYLLQN 417
Query: 470 KTSEFSEK 477
++S K
Sbjct: 418 SVKQYSGK 425
>sp|Q96I24|FUBP3_HUMAN Far upstream element-binding protein 3 OS=Homo sapiens GN=FUBP3
PE=1 SV=2
Length = 572
Score = 58.5 bits (140), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/196 (22%), Positives = 91/196 (46%), Gaps = 34/196 (17%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADT--IPGSEERVIIIYSSPTKIA 185
T+ IL P+ K+G VIG+ G +K L+E T K+ + +P ++ + I K+
Sbjct: 163 TIQEILIPASKVGLVIGRGGETIKQLQERTGVKMVMIQDGPLPTGADKPLRITGDAFKVQ 222
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDL--FGGMASDDDNENSTITAR 243
+ A++ +L++ I E+D F G+ D ++ +
Sbjct: 223 Q----------------------AREMVLEI---IREKDQADFRGVRGDFNSRMGGGSIE 257
Query: 244 LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKR 303
+ VP VG ++G+ G++I++++++ G I+ P D + P + Q+ G P+ +
Sbjct: 258 VSVPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGISP-----ERAAQVMGPPDRCQH 312
Query: 304 ALYEVSTLLHQNPRKD 319
A + +S L+ +D
Sbjct: 313 AAHIISELILTAQERD 328
Score = 57.0 bits (136), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 89/432 (20%), Positives = 157/432 (36%), Gaps = 123/432 (28%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P + +G +IG+ G + ++ E+ KI +A G ER ++ +P I +
Sbjct: 84 VPDKMVGFIIGRGGEQISRIQAESGCKIQIASESSGIPERPCVLTGTPESIEQ------- 136
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
A+ L ++ DR F +D + NSTI +L+P + VG
Sbjct: 137 ---------------AKRLLGQIVDRCRNGPGF----HNDIDSNSTIQ-EILIPASKVGL 176
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++G+ G+ I++L+ TG + ++ LP A D+ ++I+G ++A V ++
Sbjct: 177 VIGRGGETIKQLQERTGVKMVMIQDGPLPTGA---DKPLRITGDAFKVQQAREMVLEIIR 233
Query: 314 QNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSSLHGMPSTPWMGGYGD 373
+ + D + G GD
Sbjct: 234 EKDQAD-----------------------------------------------FRGVRGD 246
Query: 374 QPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV 433
SRMG GSI P F++ I VIG+ G +K++Q + G I
Sbjct: 247 FNSRMGGGSIEVSVP--------RFAVGI---------VIGRNGEMIKKIQNDAGVRIQF 289
Query: 434 EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTSEFSEK---------------- 477
+ S ER + + I ++ + F
Sbjct: 290 KPDDGISPERAAQVMGPPDRCQHAAHIISELILTAQERDGFGGLAAARGRGRGRGDWSVG 349
Query: 478 ---GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQ-DPHPGSSECI 533
G VP+ K G ++G+GG I + +++ GA V+LQ +P P S +
Sbjct: 350 APGGVQEITYTVPADKCGLVIGKGGENIKSINQQS-------GAHVELQRNPPPNSDPNL 402
Query: 534 --VDIRGSSEHL 543
IRG + +
Sbjct: 403 RRFTIRGVPQQI 414
Score = 37.7 bits (86), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 28/41 (68%)
Query: 235 NENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRV 275
++ + IT VP+ MVG ++G+ G+ I R+++E+G I++
Sbjct: 73 HQRTVITEEFKVPDKMVGFIIGRGGEQISRIQAESGCKIQI 113
>sp|Q9UNW9|NOVA2_HUMAN RNA-binding protein Nova-2 OS=Homo sapiens GN=NOVA2 PE=1 SV=1
Length = 492
Score = 56.2 bits (134), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 89/191 (46%), Gaps = 25/191 (13%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
++L PS G +IGK G + L++ET A I ++ D PG+ ERV ++ + A+
Sbjct: 36 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGT----AEA 91
Query: 188 QNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVP 247
N AE +E P + ++ + N + A+L+VP
Sbjct: 92 LNAVHSFIAEKVREI--PQAMTKPEVVNILQ-----------PQTTMNPDRAKQAKLIVP 138
Query: 248 NNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE-MVQISGKPNVAKRALY 306
N+ G ++GK G ++ + ++GA +++ P +N E +V +SG+P +A+
Sbjct: 139 NSTAGLIIGKGGATVKAVMEQSGAWVQL----SQKPEGINLQERVVTVSGEPEQVHKAVS 194
Query: 307 EVSTLLHQNPR 317
+ + ++P+
Sbjct: 195 AIVQKVQEDPQ 205
Score = 54.3 bits (129), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 93/221 (42%), Gaps = 41/221 (18%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERVIRASAFEGL 453
E+ +K+L + G +IGKGG + QLQ+ETGA+I + +D + ERV
Sbjct: 32 EYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLVQGTAEA 91
Query: 454 WN-------------PRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGH 500
N P++ T ++ + + + +L+VP+S G I+G+GG
Sbjct: 92 LNAVHSFIAEKVREIPQAMTKPEVVNILQPQTTMNPDRAKQAKLIVPNSTAGLIIGKGGA 151
Query: 501 VINEMRRRTQADIRVVGARVKLQDPHPGSS--ECIVDIRGSSEHLISAHGTYQSFMTSGQ 558
+ + ++ GA V+L G + E +V + G E + A S
Sbjct: 152 TVKAVMEQS-------GAWVQLSQKPEGINLQERVVTVSGEPEQVHKA--------VSAI 196
Query: 559 SMKVQPSSYQNINPQQSSCQTMSSHQSS--YQNMNTQQSPY 597
KVQ +PQ SSC +S + N N SPY
Sbjct: 197 VQKVQE------DPQSSSCLNISYANVAGPVANSNPTGSPY 231
Score = 50.1 bits (118), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 4/79 (5%)
Query: 469 NKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPG 528
K S E+G ++L+PS G I+G+GG I ++++ T A I++ K +D +PG
Sbjct: 22 TKRSNTGEEGEYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL----SKSKDFYPG 77
Query: 529 SSECIVDIRGSSEHLISAH 547
++E + ++G++E L + H
Sbjct: 78 TTERVCLVQGTAEALNAVH 96
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQIS 295
E++ + VP N+VG +LGK G + + TGA I++ P N V I+
Sbjct: 403 ESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRN--RRVTIT 460
Query: 296 GKPNVAKRALYEVS 309
G P + A Y +S
Sbjct: 461 GSPAATQAAQYLIS 474
Score = 35.0 bits (79), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 10/87 (11%)
Query: 482 TRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS-- 539
+ VP + VG ILG+GG + E + T A I++ K + PG+ V I GS
Sbjct: 409 VEIAVPENLVGAILGKGGKTLVEYQELTGARIQI----SKKGEFLPGTRNRRVTITGSPA 464
Query: 540 ----SEHLISAHGTYQSFMTSGQSMKV 562
+++LIS TY+ + + KV
Sbjct: 465 ATQAAQYLISQRVTYEQGVRASNPQKV 491
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 33/69 (47%), Gaps = 3/69 (4%)
Query: 123 SQPADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYS 179
++ A + I P +G ++GK G + +E T A+I ++ + +PG+ R + I
Sbjct: 402 AESAKELVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFLPGTRNRRVTITG 461
Query: 180 SPTKIAKTQ 188
SP Q
Sbjct: 462 SPAATQAAQ 470
>sp|Q91WJ8|FUBP1_MOUSE Far upstream element-binding protein 1 OS=Mus musculus GN=Fubp1
PE=1 SV=1
Length = 651
Score = 54.7 bits (130), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 31/191 (16%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS--EERVIIIYSSPT 182
P + V I+ P+ K G VIGK G +K L+E K+ + P + ++ + I P
Sbjct: 179 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 238
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
K+ + A E E + ++ + RI GG NE +
Sbjct: 239 KVQQ--------AKEMVLELIRDQGGFREVRNEYGSRI------GG------NEGIDVP- 277
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
+P VG ++G+ G++I++++++ G I+ P D P D + QI+G P+ +
Sbjct: 278 ---IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP-----DRIAQITGPPDRCQ 329
Query: 303 RALYEVSTLLH 313
A ++ LL
Sbjct: 330 HAAEIITDLLR 340
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 19/154 (12%)
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQ 466
G +G +IG+GG + ++QQE+G I + ER + + +D I++
Sbjct: 106 GMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVE 165
Query: 467 LQNKTSEFSEK---GTITTRLLVPSSKVGCILGQGGHVINEMRRR--------------T 509
F G +++P+SK G ++G+GG I +++ R T
Sbjct: 166 KGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT 225
Query: 510 QAD--IRVVGARVKLQDPHPGSSECIVDIRGSSE 541
AD +R+ G K+Q E I D G E
Sbjct: 226 GADKPLRITGDPYKVQQAKEMVLELIRDQGGFRE 259
Score = 40.8 bits (94), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 67/149 (44%), Gaps = 21/149 (14%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGAS-IHVEDAPTDSD-ERVIRASAFEGLWNPRS 458
+I+ A K G VIGKGG +KQLQ+ G + ++D P ++ ++ +R + G
Sbjct: 185 EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRIT---GDPYKVQ 241
Query: 459 QTIDAILQLQNKTSEFSE---------KGTITTRLLVPSSKVGCILGQGGHVINEMRRRT 509
Q + +L+L F E G + +P VG ++G+ G EM ++
Sbjct: 242 QAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNG----EMIKKI 297
Query: 510 QADIRVVGARVKLQDPHPGSSECIVDIRG 538
Q D G R++ + + + I I G
Sbjct: 298 QND---AGVRIQFKPDDGTTPDRIAQITG 323
Score = 40.0 bits (92), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 33/180 (18%), Positives = 75/180 (41%), Gaps = 30/180 (16%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P +G +IG+ G + +++E+ KI +A G ER ++ +P + +
Sbjct: 103 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAK----- 157
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
++ D+I+E+ D + + +++P + G
Sbjct: 158 ---------------------RLLDQIVEKGRPAPGFHHGDGPGNAVQ-EIMIPASKAGL 195
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ G + ++ + P D+ ++I+G P ++A V L+
Sbjct: 196 VIGKGGETIKQLQERAGVKMVMI---QDGPQNTGADKPLRITGDPYKVQQAKEMVLELIR 252
Score = 38.1 bits (87), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 43/89 (48%), Gaps = 11/89 (12%)
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLP-ADRLPPCAMNTDEMVQISG 296
S +T VP+ MVG ++G+ G+ I R++ E+G I++ P + LP + ++G
Sbjct: 95 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP------ERSCMLTG 148
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSF 325
P + A LL Q K +P F
Sbjct: 149 TPESVQSA----KRLLDQIVEKGRPAPGF 173
Score = 36.2 bits (82), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 6/54 (11%)
Query: 384 NSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP 437
N PPG + E + + GK G +IGKGG +K + Q++GA I ++ +P
Sbjct: 365 NMGPPGGLQEFN------FIVPTGKTGLIIGKGGETIKSISQQSGARIELQRSP 412
>sp|Q32PX7|FUBP1_RAT Far upstream element-binding protein 1 OS=Rattus norvegicus
GN=Fubp1 PE=1 SV=1
Length = 639
Score = 54.7 bits (130), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/191 (24%), Positives = 84/191 (43%), Gaps = 31/191 (16%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGS--EERVIIIYSSPT 182
P + V I+ P+ K G VIGK G +K L+E K+ + P + ++ + I P
Sbjct: 178 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITGDPY 237
Query: 183 KIAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITA 242
K+ + A E E + ++ + RI GG NE +
Sbjct: 238 KVQQ--------AKEMVLELIRDQGGFREVRNEYGSRI------GG------NEGIDVP- 276
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
+P VG ++G+ G++I++++++ G I+ P D P D + QI+G P+ +
Sbjct: 277 ---IPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP-----DRIAQITGPPDRCQ 328
Query: 303 RALYEVSTLLH 313
A ++ LL
Sbjct: 329 HAAEIITDLLR 339
Score = 47.0 bits (110), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 64/154 (41%), Gaps = 19/154 (12%)
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQ 466
G +G +IG+GG + ++QQE+G I + ER + + +D I++
Sbjct: 105 GMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVE 164
Query: 467 LQNKTSEFSEK---GTITTRLLVPSSKVGCILGQGGHVINEMRRR--------------T 509
F G +++P+SK G ++G+GG I +++ R T
Sbjct: 165 KGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNT 224
Query: 510 QAD--IRVVGARVKLQDPHPGSSECIVDIRGSSE 541
AD +R+ G K+Q E I D G E
Sbjct: 225 GADKPLRITGDPYKVQQAKEMVLELIRDQGGFRE 258
Score = 40.4 bits (93), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 42/172 (24%), Positives = 74/172 (43%), Gaps = 25/172 (14%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGAS-IHVEDAPTDSD-ERVIRASAFEGLWNPRS 458
+I+ A K G VIGKGG +KQLQ+ G + ++D P ++ ++ +R + +P
Sbjct: 184 EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITG-----DPYK 238
Query: 459 --QTIDAILQLQNKTSEFSE---------KGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
Q + +L+L F E G + +P VG ++G+ G EM +
Sbjct: 239 VQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNG----EMIK 294
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQS 559
+ Q D G R++ + + + I I G + A + S Q+
Sbjct: 295 KIQND---AGVRIQFKPDDGTTPDRIAQITGPPDRCQHAAEIITDLLRSVQA 343
Score = 39.7 bits (91), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/180 (18%), Positives = 75/180 (41%), Gaps = 30/180 (16%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P +G +IG+ G + +++E+ KI +A G ER ++ +P + +
Sbjct: 102 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAK----- 156
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
++ D+I+E+ D + + +++P + G
Sbjct: 157 ---------------------RLLDQIVEKGRPAPGFHHGDGPGNAVQ-EIMIPASKAGL 194
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ G + ++ + P D+ ++I+G P ++A V L+
Sbjct: 195 VIGKGGETIKQLQERAGVKMVMI---QDGPQNTGADKPLRITGDPYKVQQAKEMVLELIR 251
Score = 38.5 bits (88), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 236 ENSTITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLP-ADRLPPCAMNTDEMVQI 294
+ S +T VP+ MVG ++G+ G+ I R++ E+G I++ P + LP + +
Sbjct: 92 QRSVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLP------ERSCML 145
Query: 295 SGKPNVAKRALYEVSTLLHQNPRKDKPPSSF 325
+G P + A LL Q K +P F
Sbjct: 146 TGTPESVQSA----KRLLDQIVEKGRPAPGF 172
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 384 NSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP 437
N PPG + E + + GK G +IGKGG +K + Q++GA I ++ P
Sbjct: 364 NMGPPGGLQEFN------FIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNP 411
>sp|Q9Y2W6|TDRKH_HUMAN Tudor and KH domain-containing protein OS=Homo sapiens GN=TDRKH
PE=1 SV=2
Length = 561
Score = 53.5 bits (127), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 61/123 (49%), Gaps = 12/123 (9%)
Query: 391 MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF 450
+GE E M++ A K+ +IG+ G N+KQL+++TGA I V D DERV+ S F
Sbjct: 48 VGEDDIEIEMRVPQEAVKL--IIGRQGANIKQLRKQTGARIDV-DTEDVGDERVLLISGF 104
Query: 451 EGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
I IL +E ++ +L VP VG I+G+GG I + + +
Sbjct: 105 PVQVCKAKAAIHQIL---------TENTPVSEQLSVPQRSVGRIIGRGGETIRSICKASG 155
Query: 511 ADI 513
A I
Sbjct: 156 AKI 158
Score = 43.5 bits (101), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 72/170 (42%), Gaps = 43/170 (25%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D + P + +IG+ G +K LR++T A+I V DT +ERV++I P ++
Sbjct: 52 DIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV-DTEDVGDERVLLISGFPVQV-- 108
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
C A+ A+ ++ EN+ ++ +L V
Sbjct: 109 --------------------CKAKAAIHQIL-----------------TENTPVSEQLSV 131
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
P VG ++G+ G+ I+ + +GA I D+ + +++ISG
Sbjct: 132 PQRSVGRIIGRGGETIRSICKASGAKIT---CDKESEGTLLLSRLIKISG 178
Score = 33.9 bits (76), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
I + VP V ++G++G I++LR +TGA I V D + + ++ ISG P
Sbjct: 53 IEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTED------VGDERVLLISGFPV 106
Query: 300 VAKRALYEVSTLLHQN 315
+A + +L +N
Sbjct: 107 QVCKAKAAIHQILTEN 122
>sp|Q2PFW9|NOVA1_MACFA RNA-binding protein Nova-1 OS=Macaca fascicularis GN=NOVA1 PE=2
SV=1
Length = 483
Score = 53.1 bits (126), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 37/197 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
++L PS G +IGK G + L++ET A I ++ D PG+ ERV +I + +
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGT----VEA 108
Query: 188 QNKDDDSAAETKKE------SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
N AE +E EP Q DRI +
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQ------------------- 149
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE-MVQISGKPNV 300
+++VPN+ G ++GK G ++ + ++GA +++ P +N E +V +SG+P
Sbjct: 150 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL----SQKPDGINLQERVVTVSGEPEQ 205
Query: 301 AKRALYEVSTLLHQNPR 317
++A+ + + ++P+
Sbjct: 206 NRKAVELIIQKIQEDPQ 222
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 96/233 (41%), Gaps = 51/233 (21%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERVI----RASA 449
++ +K+L + G +IGKGG + QLQ+ETGA+I + +D + ERV A
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTVEA 108
Query: 450 FEGLWNPRSQTIDAILQLQNKTSEFSEKGTITT---------RLLVPSSKVGCILGQGGH 500
+ ++ I + Q KT S TT +++VP+S G I+G+GG
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 168
Query: 501 VINEMRRRTQADIRVVGARVKLQDPHPGSS--ECIVDIRGSSEHLISAHGTYQSFMTSGQ 558
+ + ++ GA V+L G + E +V + G E Q
Sbjct: 169 TVKAIMEQS-------GAWVQLSQKPDGINLQERVVTVSGEPE----------------Q 205
Query: 559 SMKVQPSSYQNI--NPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQN 609
+ K Q I +PQ SC + SY N+ P N SPY N
Sbjct: 206 NRKAVELIIQKIQEDPQSGSCLNI-----SYANVT---GPVANSNPTGSPYAN 250
Score = 40.0 bits (92), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 202 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV 261
S+ AA + + + G S D +++ + VP N+VG +LGK G
Sbjct: 363 SLAAATAATNGYFGAASPLAASAILGTEKSTDGSKD---VVEIAVPENLVGAILGKGGKT 419
Query: 262 IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
+ + TGA I++ P N V I+G P + A Y ++
Sbjct: 420 LVEYQELTGARIQISKKGEFVPGTRN--RKVTITGTPAATQAAQYLIT 465
Score = 33.1 bits (74), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
+ VP + VG ILG+GG + E + T A I++ K + PG+ V I G+
Sbjct: 401 EIAVPENLVGAILGKGGKTLVEYQELTGARIQI----SKKGEFVPGTRNRKVTITGTPAA 456
Query: 540 ---SEHLISAHGTYQSFMTSGQSMKV 562
+++LI+ TY+ + + KV
Sbjct: 457 TQAAQYLITQRITYEQGVRAANPQKV 482
Score = 33.1 bits (74), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 129 VYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSP 181
V I P +G ++GK G + +E T A+I ++ + +PG+ R + I +P
Sbjct: 399 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 454
>sp|Q80WA4|NOVA1_RAT RNA-binding protein Nova-1 (Fragment) OS=Rattus norvegicus GN=Nova1
PE=2 SV=1
Length = 474
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 88/197 (44%), Gaps = 37/197 (18%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
++L PS G +IGK G + L++ET A I ++ D PG+ ERV +I + +
Sbjct: 52 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEAL--- 108
Query: 188 QNKDDDSAAETKKE------SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
N AE +E EP Q DRI +
Sbjct: 109 -NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQ------------------- 148
Query: 242 ARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE-MVQISGKPNV 300
+++VPN+ G ++GK G ++ + ++GA +++ P +N E +V +SG+P
Sbjct: 149 VKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL----SQKPDGINLQERVVTVSGEPEQ 204
Query: 301 AKRALYEVSTLLHQNPR 317
++A+ + + ++P+
Sbjct: 205 NRKAVELIIQKIQEDPQ 221
Score = 44.7 bits (104), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 98/233 (42%), Gaps = 51/233 (21%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERV--IRAS--A 449
++ +K+L + G +IGKGG + QLQ+ETGA+I + +D + ERV I+ + A
Sbjct: 48 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 107
Query: 450 FEGLWNPRSQTIDAILQLQNKTSEFSEKGTITT---------RLLVPSSKVGCILGQGGH 500
+ ++ I + Q KT S TT +++VP+S G I+G+GG
Sbjct: 108 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQVKIIVPNSTAGLIIGKGGA 167
Query: 501 VINEMRRRTQADIRVVGARVKLQDPHPGSS--ECIVDIRGSSEHLISAHGTYQSFMTSGQ 558
+ + ++ GA V+L G + E +V + G E Q
Sbjct: 168 TVKAIMEQS-------GAWVQLSQKPDGINLQERVVTVSGEPE----------------Q 204
Query: 559 SMKVQPSSYQNI--NPQQSSCQTMSSHQSSYQNMNTQQSPYHRVNAQQSPYQN 609
+ K Q I +PQ SC + SY N+ P N PY N
Sbjct: 205 NRKAVELIIQKIQEDPQSGSCLNI-----SYANVT---GPVANSNPTGFPYAN 249
Score = 40.4 bits (93), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 202 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV 261
S+ AA + + + G S D +++ + VP N+VG +LGK G
Sbjct: 362 SLAAATAATNGYFGAASPLAASAILGTEKSTDGSKD---VVEIAVPENLVGAILGKGGKT 418
Query: 262 IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
+ + TGA I++ P N V I+G P + A Y ++
Sbjct: 419 LVEYQELTGARIQISKKGEFVPGTRN--RKVTITGTPAATQAAQYLIT 464
Score = 33.1 bits (74), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 129 VYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSP 181
V I P +G ++GK G + +E T A+I ++ + +PG+ R + I +P
Sbjct: 398 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 453
>sp|Q96AE4|FUBP1_HUMAN Far upstream element-binding protein 1 OS=Homo sapiens GN=FUBP1
PE=1 SV=3
Length = 644
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 35/193 (18%)
Query: 125 PADTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKI 184
P + V I+ P+ K G VIGK G +K L+E K+ ++I P
Sbjct: 183 PGNAVQEIMIPASKAGLVIGKGGETIKQLQERAGVKM-------------VMIQDGP--- 226
Query: 185 AKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR- 243
QN D + + A + L + D+ GG + S I
Sbjct: 227 ---QNTGADKPLRITGDPYKVQQAKEMVLELIRDQ-------GGFREVRNEYGSRIGGNE 276
Query: 244 ---LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
+ +P VG ++G+ G++I++++++ G I+ P D P + + QI+G P+
Sbjct: 277 GIDVPIPRFAVGIVIGRNGEMIKKIQNDAGVRIQFKPDDGTTP-----ERIAQITGPPDR 331
Query: 301 AKRALYEVSTLLH 313
+ A ++ LL
Sbjct: 332 CQHAAEIITDLLR 344
Score = 47.4 bits (111), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 54/113 (47%), Gaps = 5/113 (4%)
Query: 407 GKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQ 466
G +G +IG+GG + ++QQE+G I + ER + + +D I++
Sbjct: 110 GMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAKRLLDQIVE 169
Query: 467 LQNKTSEFSEK---GTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
F G +++P+SK G ++G+GG I +++ R A +++V
Sbjct: 170 KGRPAPGFHHGDGPGNAVQEIMIPASKAGLVIGKGGETIKQLQER--AGVKMV 220
Score = 42.4 bits (98), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 74/172 (43%), Gaps = 25/172 (14%)
Query: 401 KILCSAGKIGGVIGKGGFNVKQLQQETGAS-IHVEDAPTDSD-ERVIRASAFEGLWNPRS 458
+I+ A K G VIGKGG +KQLQ+ G + ++D P ++ ++ +R + +P
Sbjct: 189 EIMIPASKAGLVIGKGGETIKQLQERAGVKMVMIQDGPQNTGADKPLRITG-----DPYK 243
Query: 459 --QTIDAILQLQNKTSEFSE---------KGTITTRLLVPSSKVGCILGQGGHVINEMRR 507
Q + +L+L F E G + +P VG ++G+ G EM +
Sbjct: 244 VQQAKEMVLELIRDQGGFREVRNEYGSRIGGNEGIDVPIPRFAVGIVIGRNG----EMIK 299
Query: 508 RTQADIRVVGARVKLQDPHPGSSECIVDIRGSSEHLISAHGTYQSFMTSGQS 559
+ Q D G R++ + + E I I G + A + S Q+
Sbjct: 300 KIQND---AGVRIQFKPDDGTTPERIAQITGPPDRCQHAAEIITDLLRSVQA 348
Score = 40.0 bits (92), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 33/180 (18%), Positives = 75/180 (41%), Gaps = 30/180 (16%)
Query: 134 CPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAKTQNKDDD 193
P +G +IG+ G + +++E+ KI +A G ER ++ +P + +
Sbjct: 107 VPDGMVGFIIGRGGEQISRIQQESGCKIQIAPDSGGLPERSCMLTGTPESVQSAK----- 161
Query: 194 SAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGC 253
++ D+I+E+ D + + +++P + G
Sbjct: 162 ---------------------RLLDQIVEKGRPAPGFHHGDGPGNAVQ-EIMIPASKAGL 199
Query: 254 LLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVSTLLH 313
++GK G+ I++L+ G + ++ + P D+ ++I+G P ++A V L+
Sbjct: 200 VIGKGGETIKQLQERAGVKMVMI---QDGPQNTGADKPLRITGDPYKVQQAKEMVLELIR 256
Score = 38.1 bits (87), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 15/40 (37%), Positives = 26/40 (65%)
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLP 277
S +T VP+ MVG ++G+ G+ I R++ E+G I++ P
Sbjct: 99 SVMTEEYKVPDGMVGFIIGRGGEQISRIQQESGCKIQIAP 138
Score = 35.0 bits (79), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%), Gaps = 6/54 (11%)
Query: 384 NSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAP 437
N PPG + E + + GK G +IGKGG +K + Q++GA I ++ P
Sbjct: 369 NMGPPGGLQEFN------FIVPTGKTGLIIGKGGETIKSISQQSGARIELQRNP 416
>sp|Q9JKN6|NOVA1_MOUSE RNA-binding protein Nova-1 OS=Mus musculus GN=Nova1 PE=1 SV=2
Length = 507
Score = 52.8 bits (125), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 92/202 (45%), Gaps = 23/202 (11%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSPTKIAKT 187
++L PS G +IGK G + L++ET A I ++ D PG+ ERV +I + +
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEAL--- 109
Query: 188 QNKDDDSAAETKKE------SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTIT 241
N AE +E EP Q DRI + + + T
Sbjct: 110 -NAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTT 168
Query: 242 AR-----LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE-MVQIS 295
+R ++VPN+ G ++GK G ++ + ++GA +++ P +N E +V +S
Sbjct: 169 SRANQVKIIVPNSTAGLIIGKGGATVKAIMEQSGAWVQL----SQKPDGINLQERVVTVS 224
Query: 296 GKPNVAKRALYEVSTLLHQNPR 317
G+P ++A+ + + ++P+
Sbjct: 225 GEPEQNRKAVELIIQKIQEDPQ 246
Score = 49.7 bits (117), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 4/79 (5%)
Query: 470 KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS 529
K + E G ++L+PS G I+G+GG I ++++ T A I++ K +D +PG+
Sbjct: 40 KRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKL----SKSKDFYPGT 95
Query: 530 SECIVDIRGSSEHLISAHG 548
+E + I+G+ E L + HG
Sbjct: 96 TERVCLIQGTIEALNAVHG 114
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 66/257 (25%), Positives = 104/257 (40%), Gaps = 75/257 (29%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHV---EDAPTDSDERV------IRA 447
++ +K+L + G +IGKGG + QLQ+ETGA+I + +D + ERV I A
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPGTTERVCLIQGTIEA 108
Query: 448 -SAFEGLWNPRSQTID---------AILQLQN---------------KTSEFSEKGTITT 482
+A G + + + +ILQ Q T++ S +TT
Sbjct: 109 LNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDPMTT 168
Query: 483 ------RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSS--ECIV 534
+++VP+S G I+G+GG + + ++ GA V+L G + E +V
Sbjct: 169 SRANQVKIIVPNSTAGLIIGKGGATVKAIMEQS-------GAWVQLSQKPDGINLQERVV 221
Query: 535 DIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQNI--NPQQSSCQTMSSHQSSYQNMNT 592
+ G E Q+ K Q I +PQ SC + SY N+
Sbjct: 222 TVSGEPE----------------QNRKAVELIIQKIQEDPQSGSCLNI-----SYANVT- 259
Query: 593 QQSPYHRVNAQQSPYQN 609
P N SPY N
Sbjct: 260 --GPVANSNPTGSPYAN 274
Score = 41.2 bits (95), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/209 (22%), Positives = 82/209 (39%), Gaps = 40/209 (19%)
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAK 302
++L+P+ G ++GK G I +L+ ETGA I++ + P T+ + I G
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKSKDFYPG--TTERVCLIQG----TI 106
Query: 303 RALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP-LGNSSWPARNSSLHG 361
AL V + + R+ PQ S P ++P + P+ ++
Sbjct: 107 EALNAVHGFIAEKIRE------MPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKS 160
Query: 362 MPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNVK 421
PS P +Q +KI+ G +IGKGG VK
Sbjct: 161 SPSDPMTTSRANQ-------------------------VKIIVPNSTAGLIIGKGGATVK 195
Query: 422 QLQQETGASIHVEDAP--TDSDERVIRAS 448
+ +++GA + + P + ERV+ S
Sbjct: 196 AIMEQSGAWVQLSQKPDGINLQERVVTVS 224
Score = 40.4 bits (93), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 202 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV 261
S+ AA + + + G S D +++ + VP N+VG +LGK G
Sbjct: 387 SLAAATAATNGYFGAASPLAASAILGTEKSTDGSKD---VVEIAVPENLVGAILGKGGKT 443
Query: 262 IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
+ + TGA I++ P N V I+G P + A Y ++
Sbjct: 444 LVEYQELTGARIQISKKGEFVPGTRN--RKVTITGTPAATQAAQYLIT 489
Score = 33.5 bits (75), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
+ VP + VG ILG+GG + E + T A I++ K + PG+ V I G+
Sbjct: 425 EIAVPENLVGAILGKGGKTLVEYQELTGARIQI----SKKGEFVPGTRNRKVTITGTPAA 480
Query: 540 ---SEHLISAHGTYQSFMTSGQSMKV 562
+++LI+ TY+ + + KV
Sbjct: 481 TQAAQYLITQRITYEQGVRAANPQKV 506
Score = 33.1 bits (74), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 129 VYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSP 181
V I P +G ++GK G + +E T A+I ++ + +PG+ R + I +P
Sbjct: 423 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 478
>sp|Q80VL1|TDRKH_MOUSE Tudor and KH domain-containing protein OS=Mus musculus GN=Tdrkh
PE=1 SV=1
Length = 560
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 60/123 (48%), Gaps = 12/123 (9%)
Query: 391 MGEVSAEFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSDERVIRASAF 450
+GE E M++ A K+ +IG+ G N+KQL+++TGA I V D DERV+ S F
Sbjct: 48 VGEDDIEIEMRVPQEAVKL--IIGRQGANIKQLRKQTGARIDV-DTEDVGDERVLLISGF 104
Query: 451 EGLWNPRSQTIDAILQLQNKTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQ 510
I IL +E + +L VP VG I+G+GG I + + +
Sbjct: 105 PVQVCKAKAAIHQIL---------TENTPVFEQLSVPQRSVGRIIGRGGETIRSICKASG 155
Query: 511 ADI 513
A I
Sbjct: 156 AKI 158
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/170 (22%), Positives = 71/170 (41%), Gaps = 43/170 (25%)
Query: 127 DTVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIAK 186
D + P + +IG+ G +K LR++T A+I V DT +ERV++I P ++
Sbjct: 52 DIEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDV-DTEDVGDERVLLISGFPVQV-- 108
Query: 187 TQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLV 246
C A+ A+ ++ EN+ + +L V
Sbjct: 109 --------------------CKAKAAIHQIL-----------------TENTPVFEQLSV 131
Query: 247 PNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISG 296
P VG ++G+ G+ I+ + +GA I D+ + +++ISG
Sbjct: 132 PQRSVGRIIGRGGETIRSICKASGAKI---TCDKESEGTLLLSRLIKISG 178
Score = 33.9 bits (76), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 240 ITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPN 299
I + VP V ++G++G I++LR +TGA I V D + + ++ ISG P
Sbjct: 53 IEIEMRVPQEAVKLIIGRQGANIKQLRKQTGARIDVDTED------VGDERVLLISGFPV 106
Query: 300 VAKRALYEVSTLLHQN 315
+A + +L +N
Sbjct: 107 QVCKAKAAIHQILTEN 122
>sp|P51513|NOVA1_HUMAN RNA-binding protein Nova-1 OS=Homo sapiens GN=NOVA1 PE=1 SV=1
Length = 510
Score = 51.6 bits (122), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 26/205 (12%)
Query: 131 RILCPSRKIGGVIGKAGNIVKSLREETQAKITVA------DTIPGSEERVIIIYSSPTKI 184
++L PS G +IGK G + L++ET A I ++ D PG+ ERV +I +
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGT---- 108
Query: 185 AKTQNKDDDSAAETKKE------SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENS 238
+ N AE +E EP Q DRI + + +
Sbjct: 109 VEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDP 168
Query: 239 TITAR-----LLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDE-MV 292
T+R ++VPN+ G ++GK G ++ + ++GA +++ P +N E +V
Sbjct: 169 MTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQSGAWVQL----SQKPDGINLQERVV 224
Query: 293 QISGKPNVAKRALYEVSTLLHQNPR 317
+SG+P ++A+ + + ++P+
Sbjct: 225 TVSGEPEQNRKAVELIIQKIQEDPQ 249
Score = 49.7 bits (117), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 46/79 (58%), Gaps = 1/79 (1%)
Query: 470 KTSEFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGS 529
K + E G ++L+PS G I+G+GG I ++++ T A I+ + K +D +PG+
Sbjct: 40 KRTNTGEDGQYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIK-LSKLSKSKDFYPGT 98
Query: 530 SECIVDIRGSSEHLISAHG 548
+E + I+G+ E L + HG
Sbjct: 99 TERVCLIQGTVEALNAVHG 117
Score = 40.8 bits (94), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 65/260 (25%), Positives = 102/260 (39%), Gaps = 78/260 (30%)
Query: 397 EFSMKILCSAGKIGGVIGKGGFNVKQLQQETGASIHVEDAPTDSD------ERV------ 444
++ +K+L + G +IGKGG + QLQ+ETGA+I + D ERV
Sbjct: 49 QYFLKVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQGT 108
Query: 445 IRA-SAFEGLWNPRSQTID---------AILQLQN---------------KTSEFSEKGT 479
+ A +A G + + + +ILQ Q T++ S
Sbjct: 109 VEALNAVHGFIAEKIREMPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTKSSPSDP 168
Query: 480 ITT------RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSS--E 531
+TT +++VP+S G I+G+GG + + ++ GA V+L G + E
Sbjct: 169 MTTSRANQVKIIVPNSTAGLIIGKGGATVKAVMEQS-------GAWVQLSQKPDGINLQE 221
Query: 532 CIVDIRGSSEHLISAHGTYQSFMTSGQSMKVQPSSYQNI--NPQQSSCQTMSSHQSSYQN 589
+V + G E Q+ K Q I +PQ SC + SY N
Sbjct: 222 RVVTVSGEPE----------------QNRKAVELIIQKIQEDPQSGSCLNI-----SYAN 260
Query: 590 MNTQQSPYHRVNAQQSPYQN 609
+ P N SPY N
Sbjct: 261 VT---GPVANSNPTGSPYAN 277
Score = 40.4 bits (93), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 45/108 (41%), Gaps = 5/108 (4%)
Query: 202 SMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLLVPNNMVGCLLGKRGDV 261
S+ AA + + + G S D +++ + VP N+VG +LGK G
Sbjct: 390 SLAAATAATNGYFGAASPLAASAILGTEKSTDGSKD---VVEIAVPENLVGAILGKGGKT 446
Query: 262 IQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRALYEVS 309
+ + TGA I++ P N V I+G P + A Y ++
Sbjct: 447 LVEYQELTGARIQISKKGEFVPGTRN--RKVTITGTPAATQAAQYLIT 492
Score = 38.1 bits (87), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 81/210 (38%), Gaps = 39/210 (18%)
Query: 243 RLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMV-QISGKPNVA 301
++L+P+ G ++GK G I +L+ ETGA I++ + T E V I G
Sbjct: 53 KVLIPSYAAGSIIGKGGQTIVQLQKETGATIKLSKLSKSKDFYPGTTERVCLIQG----T 108
Query: 302 KRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHP-LGNSSWPARNSSLH 360
AL V + + R+ PQ S P ++P + P+ ++
Sbjct: 109 VEALNAVHGFIAEKIRE------MPQNVAKTEPVSILQPQTTVNPDRIKQTLPSSPTTTK 162
Query: 361 GMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGFNV 420
PS P +Q +KI+ G +IGKGG V
Sbjct: 163 SSPSDPMTTSRANQ-------------------------VKIIVPNSTAGLIIGKGGATV 197
Query: 421 KQLQQETGASIHVEDAP--TDSDERVIRAS 448
K + +++GA + + P + ERV+ S
Sbjct: 198 KAVMEQSGAWVQLSQKPDGINLQERVVTVS 227
Score = 33.5 bits (75), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
Query: 483 RLLVPSSKVGCILGQGGHVINEMRRRTQADIRVVGARVKLQDPHPGSSECIVDIRGS--- 539
+ VP + VG ILG+GG + E + T A I++ K + PG+ V I G+
Sbjct: 428 EIAVPENLVGAILGKGGKTLVEYQELTGARIQI----SKKGEFVPGTRNRKVTITGTPAA 483
Query: 540 ---SEHLISAHGTYQSFMTSGQSMKV 562
+++LI+ TY+ + + KV
Sbjct: 484 TQAAQYLITQRITYEQGVRAANPQKV 509
Score = 33.1 bits (74), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)
Query: 129 VYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVA---DTIPGSEERVIIIYSSP 181
V I P +G ++GK G + +E T A+I ++ + +PG+ R + I +P
Sbjct: 426 VVEIAVPENLVGAILGKGGKTLVEYQELTGARIQISKKGEFVPGTRNRKVTITGTP 481
>sp|C5DIR2|HEK2_LACTC Heterogeneous nuclear rnp K-like protein 2 OS=Lachancea
thermotolerans (strain ATCC 56472 / CBS 6340 / NRRL
Y-8284) GN=HEK2 PE=3 SV=1
Length = 285
Score = 51.2 bits (121), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/287 (21%), Positives = 117/287 (40%), Gaps = 64/287 (22%)
Query: 239 TITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKP 298
T+ R+LV ++G +G IQ++R + I + P +R C +D ++ SG
Sbjct: 9 TVNHRVLVSLKEAARIIGAQGMTIQKIRESSKVKIGISPHER--GC---SDRILSCSGSA 63
Query: 299 NVAKRALYEVSTLLHQNPRKDKPPSSFPQAYGGQNFHSPPAPMADMHPLGNSSWPARNSS 358
A+ +V +L+Q+ D P + +Y NF PAP A +
Sbjct: 64 QGVANAIGDVVEVLNQD---DSEPET--HSYKPLNF-ILPAPSA--------------TE 103
Query: 359 LHGMPSTPWMGGYGDQPSRMGSGSINSCPPGQMGEVSAEFSMKILCSAGKIGGVIGKGGF 418
+ S +G +++++ S ++ +IG G
Sbjct: 104 IQDPESVKRIG-----------------------------NLRLIVSNSQVSSIIGTQGS 134
Query: 419 NVKQLQQETGASIHV-EDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQNKTS----- 472
+K L ++ G + ++ DS +RV+ F G I IL + K S
Sbjct: 135 RIKSLIEKHGVKVVASKNFLPDSQDRVVEIQGFPGAIASCLVDISEILAAEPKPSHEKQY 194
Query: 473 ----EFSEKGTITTRLLVPSSKVGCILGQGGHVINEMRRRTQADIRV 515
+ E+G++T + +P VG +LG+GG+ ++ +R+ T+ + V
Sbjct: 195 YPHTKSQEEGSVTKDVAIPVEYVGALLGRGGNRVSSLRKYTKTKVIV 241
Score = 41.6 bits (96), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 87/204 (42%), Gaps = 17/204 (8%)
Query: 127 DTV-YRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIIIYSSPTKIA 185
DTV +R+L ++ +IG G ++ +RE ++ KI ++ G +R++ S +A
Sbjct: 8 DTVNHRVLVSLKEAARIIGAQGMTIQKIRESSKVKIGISPHERGCSDRILSCSGSAQGVA 67
Query: 186 KTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITARLL 245
N D ++ EP + L I D ++ RL+
Sbjct: 68 ---NAIGDVVEVLNQDDSEPETHSYKPL-----NFILPAPSATEIQDPESVKRIGNLRLI 119
Query: 246 VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNVAKRAL 305
V N+ V ++G +G I+ L + G ++V+ + P + D +V+I G P L
Sbjct: 120 VSNSQVSSIIGTQGSRIKSLIEKHG--VKVVASKNFLPDSQ--DRVVEIQGFPGAIASCL 175
Query: 306 YEVSTLLHQNPRKDKPPSSFPQAY 329
++S +L P+ PS Q Y
Sbjct: 176 VDISEILAAEPK----PSHEKQYY 195
Score = 33.1 bits (74), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 132 ILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSEERVIII 177
+ P +G ++G+ GN V SLR+ T+ K+ V+D RV I
Sbjct: 210 VAIPVEYVGALLGRGGNRVSSLRKYTKTKVIVSDEPDEENNRVFTI 255
>sp|Q3U0V1|FUBP2_MOUSE Far upstream element-binding protein 2 OS=Mus musculus GN=Khsrp
PE=1 SV=2
Length = 748
Score = 47.4 bits (111), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 42/193 (21%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE----ERVIIIYSSPTK 183
TV I+ P+ K G VIGK G +K L+E K+ + GS+ ++ + I P K
Sbjct: 235 TVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD--GSQNTNVDKPLRIIGDPYK 292
Query: 184 IAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR 243
+ Q A V D + E D GG D NE +
Sbjct: 293 V-------------------------QQACEMVMDILRERDQ-GGFG--DRNEYGSRVGG 324
Query: 244 LL---VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
+ VP + VG ++G+ G++I++++++ G I+ D P +++ I G P+
Sbjct: 325 GIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-----EKIAHIMGPPDR 379
Query: 301 AKRALYEVSTLLH 313
+ A ++ LL
Sbjct: 380 CEHAARIINDLLQ 392
Score = 42.7 bits (99), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 78/193 (40%), Gaps = 33/193 (17%)
Query: 372 GDQPSRMGSGSINSCPPGQMGEV----SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQET 427
GDQP S Q+G + + + G +G +IG+GG + ++QQ++
Sbjct: 116 GDQPDSKKLASQGDSIGSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDS 175
Query: 428 GASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQ--------NKTSEFSEKGT 479
G + + ER + + +D I+ + + + GT
Sbjct: 176 GCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGT 235
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRR--------------TQAD--IRVVGARVKLQ 523
+ +++P+ K G ++G+GG I +++ R T D +R++G K+Q
Sbjct: 236 V-QEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQ 294
Query: 524 DPHPGSSECIVDI 536
+ E ++DI
Sbjct: 295 Q----ACEMVMDI 303
Score = 42.0 bits (97), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 31/202 (15%)
Query: 353 PARNSSLHGMPSTPWMGGYGDQPSRMGSGSINS----CPPGQMGEVSAEFS----MKILC 404
P R+ SL G P + Q ++M I S PPGQ + + +I+
Sbjct: 189 PERSVSLTGAPESV-------QKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMI 241
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGAS-IHVEDAPTDSD-ERVIRASAFEGLWNPRSQTID 462
AGK G VIGKGG +KQLQ+ G I ++D +++ ++ +R + +
Sbjct: 242 PAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVM 301
Query: 463 AILQLQNKTSEFSEKGTITTRLL------VPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
IL+ +++ F ++ +R+ VP VG ++G+ G EM ++ Q D
Sbjct: 302 DILRERDQGG-FGDRNEYGSRVGGGIDVPVPRHSVGVVIGRSG----EMIKKIQND---A 353
Query: 517 GARVKLQDPHPGSSECIVDIRG 538
G R++ + E I I G
Sbjct: 354 GVRIQFKQDDGTGPEKIAHIMG 375
Score = 40.4 bits (93), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLP-ADRLPPCAMNTDEMVQISG 296
+++T VP+ MVG ++G+ G+ I +++ ++G +++ P + LP + V ++G
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP------ERSVSLTG 197
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSF-PQAYGGQN 333
P ++A + ++ + + PP F A GGQN
Sbjct: 198 APESVQKAKMMLDDIVSRG--RGGPPGQFHDNANGGQN 233
>sp|Q99PF5|FUBP2_RAT Far upstream element-binding protein 2 OS=Rattus norvegicus
GN=Khsrp PE=1 SV=1
Length = 721
Score = 47.0 bits (110), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/193 (24%), Positives = 82/193 (42%), Gaps = 42/193 (21%)
Query: 128 TVYRILCPSRKIGGVIGKAGNIVKSLREETQAKITVADTIPGSE----ERVIIIYSSPTK 183
TV I+ P+ K G VIGK G +K L+E K+ + GS+ ++ + I P K
Sbjct: 235 TVQEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQD--GSQNTNVDKPLRIIGDPYK 292
Query: 184 IAKTQNKDDDSAAETKKESMEPHCAAQDALLKVHDRIIEEDLFGGMASDDDNENSTITAR 243
+ Q A V D + E D GG D NE +
Sbjct: 293 V-------------------------QQACEMVMDILRERDQ-GGFG--DRNEYGSRVGG 324
Query: 244 LL---VPNNMVGCLLGKRGDVIQRLRSETGANIRVLPADRLPPCAMNTDEMVQISGKPNV 300
+ VP + VG ++G+ G++I++++++ G I+ D P +++ I G P+
Sbjct: 325 GIDVPVPRHSVGVVIGRSGEMIKKIQNDAGVRIQFKQDDGTGP-----EKIAHIMGPPDR 379
Query: 301 AKRALYEVSTLLH 313
+ A ++ LL
Sbjct: 380 CEHAARIINDLLQ 392
Score = 42.4 bits (98), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/193 (20%), Positives = 78/193 (40%), Gaps = 33/193 (17%)
Query: 372 GDQPSRMGSGSINSCPPGQMGEV----SAEFSMKILCSAGKIGGVIGKGGFNVKQLQQET 427
GDQP S Q+G + + + G +G +IG+GG + ++QQ++
Sbjct: 116 GDQPDSKKLASQGDSIGSQLGPIHPPPRTSMTEEYRVPDGMVGLIIGRGGEQINKIQQDS 175
Query: 428 GASIHVEDAPTDSDERVIRASAFEGLWNPRSQTIDAILQLQ--------NKTSEFSEKGT 479
G + + ER + + +D I+ + + + GT
Sbjct: 176 GCKVQISPDSGGLPERSVSLTGAPESVQKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGT 235
Query: 480 ITTRLLVPSSKVGCILGQGGHVINEMRRR--------------TQAD--IRVVGARVKLQ 523
+ +++P+ K G ++G+GG I +++ R T D +R++G K+Q
Sbjct: 236 V-QEIMIPAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQ 294
Query: 524 DPHPGSSECIVDI 536
+ E ++DI
Sbjct: 295 Q----ACEMVMDI 303
Score = 42.0 bits (97), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 89/202 (44%), Gaps = 31/202 (15%)
Query: 353 PARNSSLHGMPSTPWMGGYGDQPSRMGSGSINS----CPPGQMGEVSAEFS----MKILC 404
P R+ SL G P + Q ++M I S PPGQ + + +I+
Sbjct: 189 PERSVSLTGAPESV-------QKAKMMLDDIVSRGRGGPPGQFHDNANGGQNGTVQEIMI 241
Query: 405 SAGKIGGVIGKGGFNVKQLQQETGAS-IHVEDAPTDSD-ERVIRASAFEGLWNPRSQTID 462
AGK G VIGKGG +KQLQ+ G I ++D +++ ++ +R + +
Sbjct: 242 PAGKAGLVIGKGGETIKQLQERAGVKMILIQDGSQNTNVDKPLRIIGDPYKVQQACEMVM 301
Query: 463 AILQLQNKTSEFSEKGTITTRLL------VPSSKVGCILGQGGHVINEMRRRTQADIRVV 516
IL+ +++ F ++ +R+ VP VG ++G+ G EM ++ Q D
Sbjct: 302 DILRERDQGG-FGDRNEYGSRVGGGIDVPVPRHSVGVVIGRSG----EMIKKIQND---A 353
Query: 517 GARVKLQDPHPGSSECIVDIRG 538
G R++ + E I I G
Sbjct: 354 GVRIQFKQDDGTGPEKIAHIMG 375
Score = 40.4 bits (93), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 52/98 (53%), Gaps = 10/98 (10%)
Query: 238 STITARLLVPNNMVGCLLGKRGDVIQRLRSETGANIRVLP-ADRLPPCAMNTDEMVQISG 296
+++T VP+ MVG ++G+ G+ I +++ ++G +++ P + LP + V ++G
Sbjct: 144 TSMTEEYRVPDGMVGLIIGRGGEQINKIQQDSGCKVQISPDSGGLP------ERSVSLTG 197
Query: 297 KPNVAKRALYEVSTLLHQNPRKDKPPSSF-PQAYGGQN 333
P ++A + ++ + + PP F A GGQN
Sbjct: 198 APESVQKAKMMLDDIVSRG--RGGPPGQFHDNANGGQN 233
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.131 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 250,050,083
Number of Sequences: 539616
Number of extensions: 10893916
Number of successful extensions: 35529
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 388
Number of HSP's successfully gapped in prelim test: 206
Number of HSP's that attempted gapping in prelim test: 33012
Number of HSP's gapped (non-prelim): 2394
length of query: 650
length of database: 191,569,459
effective HSP length: 124
effective length of query: 526
effective length of database: 124,657,075
effective search space: 65569621450
effective search space used: 65569621450
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 65 (29.6 bits)