Query 046950
Match_columns 239
No_of_seqs 126 out of 1590
Neff 8.9
Searched_HMMs 29240
Date Mon Mar 25 10:24:32 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046950.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046950hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4a6d_A Hydroxyindole O-methylt 100.0 1.8E-38 6.3E-43 276.4 17.8 220 14-239 7-251 (353)
2 3p9c_A Caffeic acid O-methyltr 100.0 2.2E-36 7.5E-41 264.3 21.6 229 8-239 13-266 (364)
3 3reo_A (ISO)eugenol O-methyltr 100.0 1.3E-35 4.5E-40 259.7 19.8 229 8-239 14-268 (368)
4 3lst_A CALO1 methyltransferase 100.0 2.1E-35 7.2E-40 256.5 20.2 217 12-239 19-254 (348)
5 1fp2_A Isoflavone O-methyltran 100.0 3.2E-35 1.1E-39 255.7 20.1 226 9-239 10-253 (352)
6 1zg3_A Isoflavanone 4'-O-methy 100.0 3.9E-35 1.3E-39 255.7 19.8 228 10-239 5-258 (358)
7 3gwz_A MMCR; methyltransferase 100.0 8.8E-35 3E-39 254.5 17.0 218 12-239 35-275 (369)
8 3i53_A O-methyltransferase; CO 100.0 1.1E-34 3.9E-39 250.2 14.1 214 16-239 6-242 (332)
9 1fp1_D Isoliquiritigenin 2'-O- 100.0 1.6E-33 5.5E-38 246.7 20.9 233 4-239 11-274 (372)
10 2ip2_A Probable phenazine-spec 100.0 2.2E-33 7.5E-38 242.1 17.1 212 14-239 7-240 (334)
11 3dp7_A SAM-dependent methyltra 100.0 2.9E-32 1E-36 238.0 15.7 219 6-239 6-255 (363)
12 1qzz_A RDMB, aclacinomycin-10- 100.0 1.8E-31 6E-36 233.4 15.3 216 13-238 14-254 (374)
13 1tw3_A COMT, carminomycin 4-O- 100.0 7.8E-31 2.7E-35 228.3 17.5 213 16-238 20-255 (360)
14 1x19_A CRTF-related protein; m 100.0 2.2E-29 7.5E-34 219.3 16.3 208 9-238 24-262 (359)
15 3mcz_A O-methyltransferase; ad 100.0 4E-29 1.4E-33 216.9 17.4 208 11-239 21-255 (352)
16 2r3s_A Uncharacterized protein 100.0 5.1E-29 1.8E-33 214.5 16.3 207 17-238 8-238 (335)
17 2qm3_A Predicted methyltransfe 98.9 1.2E-08 4E-13 88.9 10.5 64 174-238 172-247 (373)
18 4gek_A TRNA (CMO5U34)-methyltr 98.8 1.3E-08 4.5E-13 84.4 9.7 67 172-238 68-145 (261)
19 3dtn_A Putative methyltransfer 98.7 7.2E-08 2.5E-12 77.8 8.9 66 173-238 43-115 (234)
20 1ve3_A Hypothetical protein PH 98.7 2.5E-08 8.5E-13 80.0 5.8 64 173-238 37-109 (227)
21 3kr9_A SAM-dependent methyltra 98.7 2.7E-08 9.2E-13 80.6 5.7 66 173-238 14-90 (225)
22 1nv8_A HEMK protein; class I a 98.6 6.1E-08 2.1E-12 81.3 7.1 64 174-238 123-198 (284)
23 3g07_A 7SK snRNA methylphospha 98.6 4.8E-08 1.7E-12 82.1 6.5 42 173-214 45-87 (292)
24 3e05_A Precorrin-6Y C5,15-meth 98.6 1.3E-07 4.5E-12 74.8 8.5 74 162-238 31-114 (204)
25 3dlc_A Putative S-adenosyl-L-m 98.6 1E-07 3.4E-12 75.7 6.7 62 176-238 45-117 (219)
26 2qe6_A Uncharacterized protein 98.6 2.1E-07 7.3E-12 77.5 8.9 65 174-238 77-163 (274)
27 3ege_A Putative methyltransfer 98.6 2.5E-07 8.6E-12 76.2 9.2 73 161-238 24-100 (261)
28 3lec_A NADB-rossmann superfami 98.6 7E-08 2.4E-12 78.3 5.6 66 173-238 20-96 (230)
29 3gnl_A Uncharacterized protein 98.5 8.1E-08 2.8E-12 78.6 5.6 66 173-238 20-96 (244)
30 3mb5_A SAM-dependent methyltra 98.5 1.6E-07 5.4E-12 76.9 7.4 74 162-238 84-168 (255)
31 4hg2_A Methyltransferase type 98.5 3.2E-07 1.1E-11 75.8 8.9 64 173-238 38-105 (257)
32 1yzh_A TRNA (guanine-N(7)-)-me 98.5 1.9E-07 6.4E-12 74.6 7.0 65 174-238 41-117 (214)
33 3ou2_A SAM-dependent methyltra 98.5 5.6E-07 1.9E-11 71.4 9.8 73 162-238 36-113 (218)
34 3pfg_A N-methyltransferase; N, 98.5 3.4E-07 1.2E-11 75.3 8.7 65 172-238 48-116 (263)
35 1nkv_A Hypothetical protein YJ 98.5 3.2E-07 1.1E-11 74.9 8.4 74 161-238 26-109 (256)
36 1yb2_A Hypothetical protein TA 98.5 1.2E-07 4E-12 78.9 5.8 74 162-238 101-185 (275)
37 3vc1_A Geranyl diphosphate 2-C 98.5 4.7E-07 1.6E-11 76.5 9.4 75 161-238 106-191 (312)
38 1jsx_A Glucose-inhibited divis 98.5 2.8E-07 9.6E-12 72.9 7.5 64 175-238 66-138 (207)
39 3f4k_A Putative methyltransfer 98.5 2.9E-07 1E-11 75.2 7.8 66 172-238 44-120 (257)
40 3b3j_A Histone-arginine methyl 98.5 4E-07 1.4E-11 81.8 9.3 75 160-238 147-230 (480)
41 3gu3_A Methyltransferase; alph 98.5 1.9E-07 6.4E-12 78.0 6.7 67 172-238 20-95 (284)
42 3dh0_A SAM dependent methyltra 98.5 1.8E-07 6.3E-12 74.6 6.4 75 161-238 27-112 (219)
43 3bus_A REBM, methyltransferase 98.5 4.4E-07 1.5E-11 74.8 8.4 74 161-238 51-135 (273)
44 3q87_B N6 adenine specific DNA 98.5 4E-07 1.4E-11 70.3 7.6 60 173-238 22-84 (170)
45 2b3t_A Protein methyltransfera 98.5 2.9E-07 1E-11 76.5 7.3 66 173-238 108-182 (276)
46 3ntv_A MW1564 protein; rossman 98.5 1.9E-07 6.5E-12 75.7 5.8 67 172-238 69-148 (232)
47 3kkz_A Uncharacterized protein 98.4 2.4E-07 8.4E-12 76.3 6.4 66 172-238 44-120 (267)
48 4dzr_A Protein-(glutamine-N5) 98.4 4.9E-08 1.7E-12 77.3 2.1 66 173-238 29-107 (215)
49 4dcm_A Ribosomal RNA large sub 98.4 3E-07 1E-11 80.0 7.2 74 162-238 213-298 (375)
50 3g5t_A Trans-aconitate 3-methy 98.4 5.1E-07 1.7E-11 75.7 8.4 66 173-238 35-119 (299)
51 1vl5_A Unknown conserved prote 98.4 2.9E-07 1E-11 75.5 6.7 74 160-238 26-109 (260)
52 2o57_A Putative sarcosine dime 98.4 4.4E-07 1.5E-11 75.9 7.9 76 161-238 68-156 (297)
53 3jwh_A HEN1; methyltransferase 98.4 3E-07 1E-11 73.4 6.5 67 172-238 27-108 (217)
54 3mgg_A Methyltransferase; NYSG 98.4 3.5E-07 1.2E-11 75.6 7.1 67 172-238 35-111 (276)
55 3ujc_A Phosphoethanolamine N-m 98.4 2.9E-07 9.9E-12 75.4 6.6 66 172-238 53-126 (266)
56 3jwg_A HEN1, methyltransferase 98.4 2E-07 6.8E-12 74.5 5.4 66 173-238 28-108 (219)
57 3gjy_A Spermidine synthase; AP 98.4 2E-07 6.9E-12 79.1 5.5 63 176-238 91-165 (317)
58 3hm2_A Precorrin-6Y C5,15-meth 98.4 2.4E-07 8.2E-12 71.3 5.5 70 166-238 19-100 (178)
59 2p35_A Trans-aconitate 2-methy 98.4 3.6E-07 1.2E-11 74.7 6.6 74 162-238 24-101 (259)
60 3g5l_A Putative S-adenosylmeth 98.4 4.8E-07 1.6E-11 73.9 7.3 64 174-238 44-114 (253)
61 3grz_A L11 mtase, ribosomal pr 98.4 8.8E-07 3E-11 70.0 8.4 65 173-238 59-131 (205)
62 3hem_A Cyclopropane-fatty-acyl 98.4 4.2E-07 1.5E-11 76.4 6.9 72 162-238 63-143 (302)
63 3mq2_A 16S rRNA methyltransfer 98.4 1.1E-06 3.8E-11 70.1 9.0 66 172-237 25-103 (218)
64 3fzg_A 16S rRNA methylase; met 98.4 2.9E-07 1E-11 72.3 5.2 65 172-238 47-121 (200)
65 2h00_A Methyltransferase 10 do 98.4 3E-07 1E-11 75.3 5.4 65 174-238 65-146 (254)
66 2yxd_A Probable cobalt-precorr 98.4 2E-07 6.8E-12 71.8 4.0 72 162-238 26-106 (183)
67 2fca_A TRNA (guanine-N(7)-)-me 98.4 3.5E-07 1.2E-11 73.2 5.5 65 174-238 38-114 (213)
68 3njr_A Precorrin-6Y methylase; 98.4 7.7E-07 2.6E-11 70.8 7.5 69 166-238 49-128 (204)
69 3uwp_A Histone-lysine N-methyl 98.4 3.8E-07 1.3E-11 79.9 6.0 74 162-238 164-258 (438)
70 1pjz_A Thiopurine S-methyltran 98.4 3E-07 1E-11 73.0 4.6 65 172-238 20-107 (203)
71 3bxo_A N,N-dimethyltransferase 98.4 1.6E-06 5.5E-11 69.8 9.0 63 173-237 39-105 (239)
72 3hnr_A Probable methyltransfer 98.4 6.8E-07 2.3E-11 71.2 6.6 72 162-238 36-112 (220)
73 3ocj_A Putative exported prote 98.3 1.4E-07 4.7E-12 79.6 2.6 67 172-238 116-193 (305)
74 3dxy_A TRNA (guanine-N(7)-)-me 98.3 3E-07 1E-11 74.0 4.4 65 174-238 34-111 (218)
75 3l8d_A Methyltransferase; stru 98.3 1.3E-06 4.6E-11 70.5 7.9 65 172-238 51-122 (242)
76 3ccf_A Cyclopropane-fatty-acyl 98.3 6.3E-07 2.2E-11 74.4 6.0 73 161-238 47-123 (279)
77 3bkw_A MLL3908 protein, S-aden 98.3 1E-06 3.4E-11 71.2 7.1 65 173-238 42-113 (243)
78 2p7i_A Hypothetical protein; p 98.3 8.6E-07 2.9E-11 71.6 6.6 64 173-238 41-109 (250)
79 2pwy_A TRNA (adenine-N(1)-)-me 98.3 1.2E-06 3.9E-11 71.6 7.3 74 162-238 87-172 (258)
80 3fpf_A Mtnas, putative unchara 98.3 5.8E-07 2E-11 75.5 5.5 66 172-238 120-194 (298)
81 1jg1_A PIMT;, protein-L-isoasp 98.3 1E-06 3.6E-11 71.3 6.9 74 161-238 81-164 (235)
82 3q7e_A Protein arginine N-meth 98.3 1.4E-06 4.9E-11 75.0 8.1 66 172-238 64-139 (349)
83 1kpg_A CFA synthase;, cyclopro 98.3 1E-06 3.6E-11 73.2 7.0 72 162-238 55-135 (287)
84 1xxl_A YCGJ protein; structura 98.3 1.3E-06 4.4E-11 70.9 7.3 73 161-238 11-93 (239)
85 3dli_A Methyltransferase; PSI- 98.3 1.4E-06 4.7E-11 70.6 7.4 63 172-238 39-107 (240)
86 3g2m_A PCZA361.24; SAM-depende 98.3 6.7E-07 2.3E-11 75.0 5.7 63 174-238 82-156 (299)
87 2pjd_A Ribosomal RNA small sub 98.3 7.2E-07 2.5E-11 76.6 6.0 75 161-238 186-267 (343)
88 1dus_A MJ0882; hypothetical pr 98.3 1.3E-06 4.5E-11 67.7 7.0 72 162-238 43-125 (194)
89 1o54_A SAM-dependent O-methylt 98.3 9.6E-07 3.3E-11 73.3 6.5 75 161-238 102-187 (277)
90 3ckk_A TRNA (guanine-N(7)-)-me 98.3 8.3E-07 2.8E-11 72.3 5.9 66 173-238 45-129 (235)
91 2bm8_A Cephalosporin hydroxyla 98.3 1.5E-06 5.3E-11 70.6 7.5 65 174-238 81-158 (236)
92 4fsd_A Arsenic methyltransfera 98.3 1E-06 3.6E-11 76.7 6.8 66 173-238 82-172 (383)
93 2plw_A Ribosomal RNA methyltra 98.3 2.9E-06 9.9E-11 66.6 8.7 59 166-229 15-75 (201)
94 1fbn_A MJ fibrillarin homologu 98.3 2.8E-06 9.7E-11 68.5 8.7 66 172-237 72-148 (230)
95 2fyt_A Protein arginine N-meth 98.3 2.2E-06 7.7E-11 73.5 8.5 66 172-238 62-137 (340)
96 2ozv_A Hypothetical protein AT 98.3 1.1E-06 3.7E-11 72.6 6.2 66 173-238 35-121 (260)
97 2pxx_A Uncharacterized protein 98.3 1.8E-06 6.1E-11 68.2 7.3 65 173-238 41-113 (215)
98 1xtp_A LMAJ004091AAA; SGPP, st 98.3 7.6E-07 2.6E-11 72.5 5.1 73 162-238 84-164 (254)
99 3tfw_A Putative O-methyltransf 98.3 4.3E-07 1.5E-11 74.4 3.6 67 172-238 61-142 (248)
100 2y1w_A Histone-arginine methyl 98.3 1.8E-06 6E-11 74.4 7.6 73 162-238 41-122 (348)
101 3adn_A Spermidine synthase; am 98.3 5.4E-07 1.8E-11 75.9 4.2 66 173-238 82-163 (294)
102 2yxe_A Protein-L-isoaspartate 98.3 1.8E-06 6.2E-11 68.6 7.1 67 172-238 75-152 (215)
103 3lbf_A Protein-L-isoaspartate 98.3 2.2E-06 7.6E-11 67.8 7.6 69 166-238 71-149 (210)
104 3duw_A OMT, O-methyltransferas 98.3 4.2E-07 1.4E-11 72.9 3.3 67 172-238 56-139 (223)
105 1xdz_A Methyltransferase GIDB; 98.3 7.1E-07 2.4E-11 72.6 4.7 66 173-238 69-147 (240)
106 2gpy_A O-methyltransferase; st 98.2 1.3E-06 4.4E-11 70.6 6.1 67 172-238 52-132 (233)
107 1nt2_A Fibrillarin-like PRE-rR 98.2 1.5E-06 5.1E-11 69.5 6.3 67 172-238 55-132 (210)
108 1wzn_A SAM-dependent methyltra 98.2 2E-06 6.7E-11 70.1 7.2 64 173-238 40-111 (252)
109 3g89_A Ribosomal RNA small sub 98.2 5.4E-07 1.9E-11 74.0 3.8 65 174-238 80-157 (249)
110 3mti_A RRNA methylase; SAM-dep 98.2 1.2E-06 4.1E-11 68.0 5.5 65 172-238 20-95 (185)
111 2xvm_A Tellurite resistance pr 98.2 2.5E-06 8.4E-11 66.6 7.3 72 162-238 23-103 (199)
112 3eey_A Putative rRNA methylase 98.2 8.2E-07 2.8E-11 69.7 4.5 67 172-238 20-99 (197)
113 1m6y_A S-adenosyl-methyltransf 98.2 1.3E-06 4.4E-11 73.8 5.9 76 160-238 15-104 (301)
114 3tr6_A O-methyltransferase; ce 98.2 6.4E-07 2.2E-11 71.8 3.8 67 172-238 62-146 (225)
115 2yqz_A Hypothetical protein TT 98.2 2.5E-06 8.7E-11 69.6 7.4 65 172-238 37-110 (263)
116 3lpm_A Putative methyltransfer 98.2 1.3E-06 4.3E-11 71.9 5.5 66 172-238 46-125 (259)
117 2vdv_E TRNA (guanine-N(7)-)-me 98.2 2.2E-06 7.6E-11 69.9 7.0 66 173-238 48-134 (246)
118 3cgg_A SAM-dependent methyltra 98.2 2.5E-06 8.4E-11 66.2 6.9 64 173-238 45-113 (195)
119 3h2b_A SAM-dependent methyltra 98.2 1.4E-06 4.7E-11 68.6 5.4 62 175-238 42-108 (203)
120 3m33_A Uncharacterized protein 98.2 1.6E-06 5.4E-11 69.8 5.9 64 173-238 47-117 (226)
121 1iy9_A Spermidine synthase; ro 98.2 9.4E-07 3.2E-11 73.7 4.7 66 173-238 74-154 (275)
122 2esr_A Methyltransferase; stru 98.2 4.8E-07 1.7E-11 69.8 2.7 65 173-238 30-106 (177)
123 1ne2_A Hypothetical protein TA 98.2 1.7E-06 5.6E-11 68.2 5.7 64 173-238 50-116 (200)
124 2fhp_A Methylase, putative; al 98.2 1E-06 3.4E-11 68.3 4.3 65 173-238 43-122 (187)
125 2gb4_A Thiopurine S-methyltran 98.2 1.2E-06 4.3E-11 72.0 4.9 63 174-238 68-158 (252)
126 3bkx_A SAM-dependent methyltra 98.2 9.1E-07 3.1E-11 73.0 4.1 74 162-238 34-128 (275)
127 4htf_A S-adenosylmethionine-de 98.2 1.5E-06 5.1E-11 72.3 5.4 63 174-238 68-142 (285)
128 3dr5_A Putative O-methyltransf 98.2 1.8E-06 6E-11 69.6 5.7 62 177-238 59-135 (221)
129 2frn_A Hypothetical protein PH 98.2 1.5E-06 5E-11 72.5 5.2 65 173-238 124-198 (278)
130 3u81_A Catechol O-methyltransf 98.2 2E-06 6.7E-11 69.0 5.8 67 172-238 56-140 (221)
131 3lcc_A Putative methyl chlorid 98.2 1.2E-06 4.1E-11 70.7 4.4 62 175-238 67-138 (235)
132 2avd_A Catechol-O-methyltransf 98.2 7.6E-07 2.6E-11 71.5 3.1 67 172-238 67-151 (229)
133 1g6q_1 HnRNP arginine N-methyl 98.2 3.9E-06 1.3E-10 71.6 7.5 66 172-238 36-111 (328)
134 2ipx_A RRNA 2'-O-methyltransfe 98.2 2.3E-06 7.8E-11 69.1 5.8 67 172-238 75-153 (233)
135 3ggd_A SAM-dependent methyltra 98.2 1.3E-06 4.3E-11 71.0 4.2 65 172-238 54-130 (245)
136 3m70_A Tellurite resistance pr 98.2 4.3E-06 1.5E-10 69.5 7.6 73 161-238 110-190 (286)
137 1g8a_A Fibrillarin-like PRE-rR 98.1 5E-06 1.7E-10 66.7 7.5 67 172-238 71-149 (227)
138 3r3h_A O-methyltransferase, SA 98.1 7.9E-07 2.7E-11 72.7 2.7 67 172-238 58-142 (242)
139 3d2l_A SAM-dependent methyltra 98.1 3E-06 1E-10 68.4 6.2 63 173-238 32-102 (243)
140 2hnk_A SAM-dependent O-methylt 98.1 3.2E-06 1.1E-10 68.5 6.3 57 172-228 58-123 (239)
141 3c3p_A Methyltransferase; NP_9 98.1 1.4E-06 4.7E-11 69.2 4.0 66 173-238 55-132 (210)
142 3ofk_A Nodulation protein S; N 98.1 2.8E-06 9.4E-11 67.5 5.7 65 172-238 49-120 (216)
143 3i9f_A Putative type 11 methyl 98.1 7.6E-07 2.6E-11 68.1 2.3 67 166-238 11-81 (170)
144 2fk8_A Methoxy mycolic acid sy 98.1 3.7E-06 1.3E-10 71.0 6.8 72 162-238 81-161 (318)
145 1p91_A Ribosomal RNA large sub 98.1 4.5E-06 1.5E-10 68.7 7.1 66 173-238 84-154 (269)
146 3orh_A Guanidinoacetate N-meth 98.1 1E-06 3.5E-11 71.6 3.1 65 173-238 59-134 (236)
147 3tma_A Methyltransferase; thum 98.1 3.6E-06 1.2E-10 72.4 6.6 67 172-238 201-278 (354)
148 1zq9_A Probable dimethyladenos 98.1 3.2E-06 1.1E-10 70.7 6.1 73 161-238 18-99 (285)
149 3frh_A 16S rRNA methylase; met 98.1 6.3E-06 2.1E-10 67.1 7.5 63 173-238 104-174 (253)
150 1y8c_A S-adenosylmethionine-de 98.1 4.8E-06 1.6E-10 67.1 6.9 63 174-238 37-107 (246)
151 3sm3_A SAM-dependent methyltra 98.1 3.9E-06 1.3E-10 67.2 6.3 65 172-238 28-107 (235)
152 1vbf_A 231AA long hypothetical 98.1 6.1E-06 2.1E-10 66.2 7.4 72 162-238 61-140 (231)
153 3p2e_A 16S rRNA methylase; met 98.1 3.6E-06 1.2E-10 68.0 5.9 56 173-228 23-89 (225)
154 3p9n_A Possible methyltransfer 98.1 3.4E-06 1.1E-10 65.8 5.5 65 173-238 43-119 (189)
155 1ws6_A Methyltransferase; stru 98.1 1.4E-06 5E-11 66.3 3.2 63 174-238 41-116 (171)
156 2b25_A Hypothetical protein; s 98.1 7.5E-06 2.6E-10 69.9 8.0 75 161-238 95-193 (336)
157 4hc4_A Protein arginine N-meth 98.1 3.6E-06 1.2E-10 73.1 6.0 63 174-237 83-154 (376)
158 3evz_A Methyltransferase; NYSG 98.1 4.9E-06 1.7E-10 66.8 6.4 66 172-238 53-129 (230)
159 1dl5_A Protein-L-isoaspartate 98.1 5.4E-06 1.9E-10 70.3 7.0 74 162-238 66-150 (317)
160 2cmg_A Spermidine synthase; tr 98.1 4.8E-06 1.7E-10 68.9 6.4 64 173-238 71-145 (262)
161 1ej0_A FTSJ; methyltransferase 98.1 8.1E-06 2.8E-10 62.0 7.3 63 172-238 20-94 (180)
162 3r0q_C Probable protein argini 98.1 4.8E-06 1.6E-10 72.4 6.5 66 172-238 61-135 (376)
163 1sui_A Caffeoyl-COA O-methyltr 98.1 2.1E-06 7.1E-11 70.4 3.9 67 172-238 77-162 (247)
164 3bgv_A MRNA CAP guanine-N7 met 98.1 1.5E-05 5.3E-10 67.1 9.4 88 146-238 10-120 (313)
165 3e23_A Uncharacterized protein 98.1 2.7E-06 9.3E-11 67.4 4.5 65 172-238 41-108 (211)
166 3gru_A Dimethyladenosine trans 98.1 5.6E-06 1.9E-10 69.7 6.6 73 161-238 40-120 (295)
167 2pt6_A Spermidine synthase; tr 98.1 1.3E-06 4.4E-11 74.5 2.7 66 173-238 115-195 (321)
168 1l3i_A Precorrin-6Y methyltran 98.1 3E-06 1E-10 65.5 4.6 69 166-238 27-106 (192)
169 1xj5_A Spermidine synthase 1; 98.1 2.2E-06 7.5E-11 73.4 4.1 66 173-238 119-200 (334)
170 1i9g_A Hypothetical protein RV 98.1 8.1E-06 2.8E-10 67.5 7.4 74 162-238 90-177 (280)
171 2o07_A Spermidine synthase; st 98.1 2.2E-06 7.6E-11 72.4 4.0 66 173-238 94-174 (304)
172 3a27_A TYW2, uncharacterized p 98.1 3.8E-06 1.3E-10 69.8 5.4 67 172-238 117-192 (272)
173 3gdh_A Trimethylguanosine synt 98.1 2.2E-06 7.5E-11 69.4 3.8 63 174-238 78-150 (241)
174 3e8s_A Putative SAM dependent 98.1 6.2E-06 2.1E-10 65.5 6.4 72 162-238 43-122 (227)
175 2ih2_A Modification methylase 98.1 7.5E-06 2.6E-10 71.8 7.4 62 174-238 39-104 (421)
176 3cc8_A Putative methyltransfer 98.1 6E-06 2.1E-10 65.7 6.2 63 173-238 31-99 (230)
177 3bwc_A Spermidine synthase; SA 98.0 1.9E-06 6.3E-11 72.9 3.2 66 173-238 94-175 (304)
178 1inl_A Spermidine synthase; be 98.0 2.4E-06 8.2E-11 71.9 3.9 66 173-238 89-169 (296)
179 2yvl_A TRMI protein, hypotheti 98.0 1E-05 3.5E-10 65.5 7.5 65 172-238 89-164 (248)
180 1zx0_A Guanidinoacetate N-meth 98.0 2.3E-06 7.9E-11 69.2 3.6 65 173-238 59-134 (236)
181 1o9g_A RRNA methyltransferase; 98.0 2.3E-06 7.8E-11 69.9 3.5 41 174-214 51-94 (250)
182 1u2z_A Histone-lysine N-methyl 98.0 7.4E-06 2.5E-10 72.4 7.0 67 172-238 240-329 (433)
183 2i7c_A Spermidine synthase; tr 98.0 2.2E-06 7.5E-11 71.7 3.4 66 173-238 77-157 (283)
184 1mjf_A Spermidine synthase; sp 98.0 2.2E-06 7.6E-11 71.6 3.4 65 173-238 74-158 (281)
185 3c3y_A Pfomt, O-methyltransfer 98.0 2.8E-06 9.6E-11 69.1 3.9 67 172-238 68-153 (237)
186 3dou_A Ribosomal RNA large sub 98.0 9.4E-06 3.2E-10 63.8 6.8 69 162-238 15-97 (191)
187 2nxc_A L11 mtase, ribosomal pr 98.0 3.3E-06 1.1E-10 69.4 4.3 65 172-238 118-190 (254)
188 1wy7_A Hypothetical protein PH 98.0 6.9E-06 2.4E-10 64.8 6.0 63 174-238 49-118 (207)
189 2pbf_A Protein-L-isoaspartate 98.0 1E-05 3.5E-10 64.8 7.0 67 172-238 78-168 (227)
190 2ex4_A Adrenal gland protein A 98.0 3.3E-06 1.1E-10 68.4 4.0 64 174-238 79-152 (241)
191 2ift_A Putative methylase HI07 98.0 3E-06 1E-10 67.1 3.6 64 174-238 53-131 (201)
192 3tm4_A TRNA (guanine N2-)-meth 98.0 3.9E-06 1.3E-10 72.9 4.5 67 172-238 215-292 (373)
193 3thr_A Glycine N-methyltransfe 98.0 4.9E-06 1.7E-10 69.3 4.9 69 166-238 51-136 (293)
194 1uir_A Polyamine aminopropyltr 98.0 2.9E-06 9.9E-11 72.0 3.5 66 173-238 76-157 (314)
195 1ri5_A MRNA capping enzyme; me 98.0 1.3E-05 4.3E-10 66.7 7.3 65 173-238 63-139 (298)
196 3htx_A HEN1; HEN1, small RNA m 98.0 8E-06 2.7E-10 77.0 6.5 66 173-238 720-802 (950)
197 2kw5_A SLR1183 protein; struct 98.0 7E-06 2.4E-10 64.4 5.3 60 177-238 32-100 (202)
198 3lcv_B Sisomicin-gentamicin re 98.0 2.1E-06 7.1E-11 70.7 2.3 66 173-238 131-204 (281)
199 2h1r_A Dimethyladenosine trans 98.0 4.4E-06 1.5E-10 70.4 4.4 73 161-238 32-112 (299)
200 2fpo_A Methylase YHHF; structu 98.0 7.6E-06 2.6E-10 64.7 5.5 64 174-238 54-128 (202)
201 2b2c_A Spermidine synthase; be 98.0 2.3E-06 7.8E-11 72.7 2.3 66 173-238 107-187 (314)
202 2p8j_A S-adenosylmethionine-de 98.0 1E-05 3.4E-10 63.7 5.9 66 172-238 21-95 (209)
203 3fut_A Dimethyladenosine trans 98.0 9E-06 3.1E-10 67.6 5.7 71 161-237 37-115 (271)
204 1i1n_A Protein-L-isoaspartate 98.0 1.6E-05 5.4E-10 63.6 7.0 67 172-238 75-157 (226)
205 1af7_A Chemotaxis receptor met 98.0 9.4E-06 3.2E-10 67.6 5.8 66 174-239 105-220 (274)
206 2nyu_A Putative ribosomal RNA 98.0 2.4E-05 8.1E-10 61.0 7.7 63 172-238 20-103 (196)
207 1r18_A Protein-L-isoaspartate( 97.9 8.6E-06 2.9E-10 65.4 5.1 67 172-238 82-169 (227)
208 3cbg_A O-methyltransferase; cy 97.9 2.6E-06 8.8E-11 69.0 1.9 66 173-238 71-154 (232)
209 3k0b_A Predicted N6-adenine-sp 97.9 1.3E-05 4.5E-10 70.1 6.1 76 160-238 190-313 (393)
210 3ldu_A Putative methylase; str 97.9 1.1E-05 3.8E-10 70.4 5.4 76 160-238 184-307 (385)
211 1qam_A ERMC' methyltransferase 97.9 1.9E-05 6.6E-10 64.4 6.1 66 161-231 20-91 (244)
212 3ldg_A Putative uncharacterize 97.9 2.1E-05 7.2E-10 68.6 6.7 76 160-238 183-306 (384)
213 1uwv_A 23S rRNA (uracil-5-)-me 97.9 2.1E-05 7.3E-10 69.6 6.6 65 172-238 284-362 (433)
214 3tqs_A Ribosomal RNA small sub 97.8 1.3E-05 4.5E-10 66.0 4.7 63 161-228 19-86 (255)
215 3dmg_A Probable ribosomal RNA 97.8 3.1E-05 1E-09 67.5 7.0 63 174-238 233-304 (381)
216 3o4f_A Spermidine synthase; am 97.8 2.8E-05 9.5E-10 65.2 6.2 67 172-238 81-163 (294)
217 2gs9_A Hypothetical protein TT 97.8 1.8E-05 6.2E-10 62.5 4.8 60 174-238 36-101 (211)
218 2avn_A Ubiquinone/menaquinone 97.8 2.6E-05 9E-10 63.8 5.8 64 173-238 53-120 (260)
219 3ftd_A Dimethyladenosine trans 97.8 2.8E-05 9.4E-10 63.8 5.9 67 161-231 21-91 (249)
220 3iv6_A Putative Zn-dependent a 97.8 1.4E-05 4.6E-10 66.1 4.0 50 161-215 35-85 (261)
221 3k6r_A Putative transferase PH 97.8 1.8E-05 6E-10 66.0 4.7 66 172-238 123-198 (278)
222 3uzu_A Ribosomal RNA small sub 97.8 1E-05 3.5E-10 67.5 2.9 67 162-231 33-105 (279)
223 1vlm_A SAM-dependent methyltra 97.8 3.8E-05 1.3E-09 61.2 6.1 57 175-238 48-108 (219)
224 2zfu_A Nucleomethylin, cerebra 97.8 5.8E-05 2E-09 59.7 7.1 53 173-238 66-121 (215)
225 1ixk_A Methyltransferase; open 97.8 3.3E-05 1.1E-09 65.5 5.8 67 172-238 116-193 (315)
226 3id6_C Fibrillarin-like rRNA/T 97.7 0.00011 3.7E-09 59.6 7.3 67 172-238 74-152 (232)
227 2oxt_A Nucleoside-2'-O-methylt 97.6 2.8E-05 9.6E-10 64.4 3.7 64 172-238 72-146 (265)
228 1yub_A Ermam, rRNA methyltrans 97.6 2.3E-05 7.8E-10 63.9 3.0 66 161-231 19-90 (245)
229 2wa2_A Non-structural protein 97.6 2.5E-05 8.5E-10 65.1 3.2 64 172-238 80-154 (276)
230 2i62_A Nicotinamide N-methyltr 97.6 1.3E-05 4.4E-10 65.4 1.4 64 174-238 56-163 (265)
231 3ajd_A Putative methyltransfer 97.6 3.5E-05 1.2E-09 63.9 4.0 67 172-238 81-162 (274)
232 2r6z_A UPF0341 protein in RSP 97.6 1.8E-05 6.3E-10 65.2 2.2 64 173-238 82-167 (258)
233 3bzb_A Uncharacterized protein 97.6 0.00011 3.7E-09 61.1 7.0 65 173-238 78-169 (281)
234 2f8l_A Hypothetical protein LM 97.6 4.2E-05 1.4E-09 65.5 4.5 65 174-238 130-207 (344)
235 2yx1_A Hypothetical protein MJ 97.6 5E-05 1.7E-09 64.9 4.9 63 173-238 194-264 (336)
236 2p41_A Type II methyltransfera 97.6 4.4E-05 1.5E-09 64.5 4.4 64 172-238 80-154 (305)
237 1qyr_A KSGA, high level kasuga 97.6 4.7E-05 1.6E-09 62.5 4.2 63 161-228 11-78 (252)
238 4df3_A Fibrillarin-like rRNA/T 97.6 7.4E-05 2.5E-09 60.6 5.3 67 172-238 75-153 (233)
239 2jjq_A Uncharacterized RNA met 97.6 0.00011 3.8E-09 64.9 6.6 63 173-238 289-359 (425)
240 4azs_A Methyltransferase WBDD; 97.6 7.8E-05 2.7E-09 68.3 5.8 65 172-238 64-140 (569)
241 2igt_A SAM dependent methyltra 97.6 3.2E-05 1.1E-09 66.1 3.0 63 174-238 153-231 (332)
242 2qfm_A Spermine synthase; sper 97.6 4.8E-05 1.6E-09 65.5 4.0 65 173-238 187-273 (364)
243 3giw_A Protein of unknown func 97.5 0.00026 8.8E-09 58.8 7.5 56 173-228 77-142 (277)
244 3sso_A Methyltransferase; macr 97.5 0.00016 5.5E-09 63.1 6.2 63 174-238 216-294 (419)
245 4gqb_A Protein arginine N-meth 97.5 0.00013 4.4E-09 67.3 5.9 96 134-237 323-433 (637)
246 2yxl_A PH0851 protein, 450AA l 97.4 0.00022 7.6E-09 63.3 6.9 67 172-238 257-336 (450)
247 2k4m_A TR8_protein, UPF0146 pr 97.4 0.00016 5.4E-09 54.1 4.7 56 172-237 33-94 (153)
248 2vdw_A Vaccinia virus capping 97.4 0.00015 5.3E-09 61.0 5.0 64 174-238 48-135 (302)
249 2b78_A Hypothetical protein SM 97.4 6.2E-05 2.1E-09 65.6 2.5 65 173-238 211-291 (385)
250 2oyr_A UPF0341 protein YHIQ; a 97.3 9.4E-05 3.2E-09 60.9 3.1 72 162-238 77-170 (258)
251 1wg8_A Predicted S-adenosylmet 97.3 0.00048 1.6E-08 57.2 7.0 75 159-238 10-95 (285)
252 2a14_A Indolethylamine N-methy 97.3 4.2E-05 1.4E-09 62.9 0.6 38 174-213 55-94 (263)
253 2as0_A Hypothetical protein PH 97.3 7.8E-05 2.7E-09 65.1 2.1 64 174-238 217-295 (396)
254 2g72_A Phenylethanolamine N-me 97.3 0.00016 5.6E-09 60.0 3.8 39 174-213 71-110 (289)
255 3v97_A Ribosomal RNA large sub 97.2 0.00042 1.4E-08 65.0 5.9 76 160-238 179-309 (703)
256 1sqg_A SUN protein, FMU protei 97.2 0.00027 9.2E-09 62.4 4.3 66 173-238 245-321 (429)
257 3ll7_A Putative methyltransfer 97.2 0.00015 5.1E-09 63.6 2.6 62 175-238 94-169 (410)
258 3c0k_A UPF0064 protein YCCW; P 97.1 0.00014 4.8E-09 63.5 2.0 65 173-238 219-299 (396)
259 1wxx_A TT1595, hypothetical pr 97.1 0.00013 4.5E-09 63.3 1.8 63 174-238 209-285 (382)
260 3bt7_A TRNA (uracil-5-)-methyl 97.1 0.00027 9.3E-09 61.1 3.7 52 175-228 214-272 (369)
261 3hp7_A Hemolysin, putative; st 97.1 0.0005 1.7E-08 57.5 5.0 74 162-238 75-157 (291)
262 4e2x_A TCAB9; kijanose, tetron 97.1 0.00027 9.3E-09 61.8 3.5 72 160-238 96-177 (416)
263 2okc_A Type I restriction enzy 97.0 0.00055 1.9E-08 60.7 5.0 65 174-238 171-259 (445)
264 4dmg_A Putative uncharacterize 97.0 0.00053 1.8E-08 59.9 4.4 63 174-238 214-286 (393)
265 2aot_A HMT, histamine N-methyl 97.0 0.0011 3.9E-08 54.9 6.2 41 174-214 52-99 (292)
266 2frx_A Hypothetical protein YE 96.9 0.0014 4.8E-08 58.6 6.6 65 174-238 117-193 (479)
267 3v97_A Ribosomal RNA large sub 96.9 0.00077 2.6E-08 63.2 5.0 64 174-238 539-615 (703)
268 2b9e_A NOL1/NOP2/SUN domain fa 96.9 0.0017 6E-08 54.7 6.7 67 172-238 100-180 (309)
269 3m6w_A RRNA methylase; rRNA me 96.9 0.0005 1.7E-08 61.3 3.2 66 172-238 99-176 (464)
270 2dul_A N(2),N(2)-dimethylguano 96.8 0.0011 3.7E-08 57.6 4.9 65 174-238 47-137 (378)
271 2xyq_A Putative 2'-O-methyl tr 96.8 0.0014 4.8E-08 54.8 5.1 59 172-238 61-129 (290)
272 3opn_A Putative hemolysin; str 96.8 0.0019 6.4E-08 52.2 5.7 48 162-212 27-75 (232)
273 4auk_A Ribosomal RNA large sub 96.8 0.0012 4.1E-08 56.9 4.5 64 172-237 209-275 (375)
274 3m4x_A NOL1/NOP2/SUN family pr 96.7 0.00063 2.2E-08 60.5 2.8 67 172-238 103-181 (456)
275 3axs_A Probable N(2),N(2)-dime 96.7 0.001 3.5E-08 58.0 3.6 65 174-238 52-131 (392)
276 3ua3_A Protein arginine N-meth 96.6 0.0018 6.2E-08 60.1 4.7 63 175-237 410-500 (745)
277 3c6k_A Spermine synthase; sper 96.5 0.0017 5.8E-08 56.1 3.5 64 174-238 205-290 (381)
278 3tka_A Ribosomal RNA small sub 96.2 0.0082 2.8E-07 51.0 6.4 77 159-238 45-134 (347)
279 2ar0_A M.ecoki, type I restric 95.9 0.0071 2.4E-07 54.9 4.7 65 174-238 169-267 (541)
280 3p8z_A Mtase, non-structural p 95.4 0.023 8E-07 45.8 5.6 67 172-238 76-150 (267)
281 3s1s_A Restriction endonucleas 95.2 0.014 4.8E-07 55.1 4.3 65 174-238 321-405 (878)
282 3lkd_A Type I restriction-modi 95.2 0.012 4E-07 53.5 3.6 65 174-238 221-303 (542)
283 3khk_A Type I restriction-modi 95.1 0.0091 3.1E-07 54.2 2.6 63 176-238 246-335 (544)
284 3gcz_A Polyprotein; flavivirus 95.0 0.026 9E-07 46.5 4.9 36 172-207 88-123 (282)
285 2px2_A Genome polyprotein [con 94.8 0.0062 2.1E-07 49.7 0.5 66 171-237 70-144 (269)
286 1i4w_A Mitochondrial replicati 94.7 0.088 3E-06 45.1 7.4 54 175-228 59-116 (353)
287 1rjd_A PPM1P, carboxy methyl t 94.6 0.066 2.2E-06 45.5 6.4 56 173-228 96-178 (334)
288 3evf_A RNA-directed RNA polyme 94.6 0.049 1.7E-06 44.9 5.3 36 172-207 72-107 (277)
289 3lkz_A Non-structural protein 93.7 0.057 1.9E-06 44.9 4.0 67 172-238 92-166 (321)
290 2qy6_A UPF0209 protein YFCK; s 93.1 0.067 2.3E-06 43.7 3.7 33 174-206 60-104 (257)
291 3b5i_A S-adenosyl-L-methionine 92.9 0.06 2.1E-06 46.5 3.3 63 175-237 53-155 (374)
292 3eld_A Methyltransferase; flav 92.9 0.09 3.1E-06 43.7 4.1 67 171-237 78-152 (300)
293 3cvo_A Methyltransferase-like 92.8 0.45 1.6E-05 37.3 7.8 53 172-227 28-90 (202)
294 2zig_A TTHA0409, putative modi 92.4 0.16 5.5E-06 42.1 5.2 39 174-214 235-274 (297)
295 2efj_A 3,7-dimethylxanthine me 91.6 0.11 3.7E-06 45.0 3.2 63 175-237 53-154 (384)
296 2wk1_A NOVP; transferase, O-me 90.1 0.72 2.4E-05 38.1 6.8 66 173-238 105-215 (282)
297 2ld4_A Anamorsin; methyltransf 89.8 0.092 3.1E-06 39.6 1.0 51 172-238 10-69 (176)
298 2uyo_A Hypothetical protein ML 88.4 0.66 2.3E-05 38.8 5.4 54 173-228 101-164 (310)
299 1m6e_X S-adenosyl-L-methionnin 87.2 0.17 5.9E-06 43.3 1.1 64 174-237 51-144 (359)
300 3iht_A S-adenosyl-L-methionine 86.2 3.3 0.00011 31.0 7.4 32 175-206 41-72 (174)
301 2py6_A Methyltransferase FKBM; 85.5 0.88 3E-05 39.5 4.8 37 173-209 225-264 (409)
302 1zkd_A DUF185; NESG, RPR58, st 83.4 1.5 5.1E-05 37.9 5.2 37 175-211 81-124 (387)
303 2oo3_A Protein involved in cat 83.3 1.1 3.9E-05 36.9 4.2 63 174-238 91-165 (283)
304 1g60_A Adenine-specific methyl 81.7 2.1 7E-05 34.5 5.2 38 173-212 211-249 (260)
305 2heo_A Z-DNA binding protein 1 81.5 0.9 3.1E-05 28.6 2.4 41 37-81 12-66 (67)
306 3mq0_A Transcriptional repress 79.9 0.91 3.1E-05 37.2 2.5 45 37-85 32-90 (275)
307 3ufb_A Type I restriction-modi 75.6 3.1 0.00011 37.4 4.9 65 174-238 217-308 (530)
308 3iei_A Leucine carboxyl methyl 74.9 8.6 0.0003 32.3 7.2 81 146-228 64-174 (334)
309 3vrd_B FCCB subunit, flavocyto 74.0 3.3 0.00011 35.2 4.5 32 175-206 2-35 (401)
310 4f3n_A Uncharacterized ACR, CO 74.0 5.5 0.00019 34.8 5.8 57 141-207 114-175 (432)
311 1y0u_A Arsenical resistance op 73.5 3.2 0.00011 27.7 3.5 47 31-85 27-87 (96)
312 3r24_A NSP16, 2'-O-methyl tran 73.0 3.4 0.00012 34.4 4.0 58 173-237 108-174 (344)
313 3mag_A VP39; methylated adenin 72.9 2.1 7.2E-05 35.4 2.8 51 174-224 60-114 (307)
314 3llv_A Exopolyphosphatase-rela 70.9 8.3 0.00028 27.3 5.4 60 176-238 7-76 (141)
315 2xrn_A HTH-type transcriptiona 70.0 2.4 8.3E-05 33.8 2.5 47 38-87 9-69 (241)
316 3b73_A PHIH1 repressor-like pr 69.6 3.2 0.00011 29.0 2.8 31 56-90 49-79 (111)
317 3fwz_A Inner membrane protein 69.5 6.9 0.00024 27.9 4.7 61 176-238 8-77 (140)
318 3r4k_A Transcriptional regulat 68.8 1.5 5.2E-05 35.5 1.1 46 38-86 9-68 (260)
319 1mkm_A ICLR transcriptional re 68.1 4 0.00014 32.6 3.5 43 38-84 11-67 (249)
320 3hyw_A Sulfide-quinone reducta 64.0 6.8 0.00023 33.8 4.4 31 176-206 3-35 (430)
321 2fu4_A Ferric uptake regulatio 61.9 4 0.00014 26.3 2.0 15 56-70 58-72 (83)
322 3ech_A MEXR, multidrug resista 61.9 19 0.00065 25.3 5.9 54 34-88 36-105 (142)
323 2g7u_A Transcriptional regulat 61.4 4.3 0.00015 32.6 2.4 46 38-88 17-76 (257)
324 2o0y_A Transcriptional regulat 61.0 4.2 0.00014 32.8 2.3 43 38-84 26-82 (260)
325 4a5n_A Uncharacterized HTH-typ 57.5 15 0.00053 26.2 4.6 75 14-89 14-95 (131)
326 2oqg_A Possible transcriptiona 56.2 7.7 0.00026 26.4 2.8 44 35-84 21-81 (114)
327 3mwm_A ZUR, putative metal upt 56.1 10 0.00035 27.3 3.5 26 56-81 54-79 (139)
328 1lss_A TRK system potassium up 56.0 20 0.00067 24.8 5.0 61 176-238 5-75 (140)
329 2ia2_A Putative transcriptiona 55.5 4.7 0.00016 32.5 1.7 45 38-87 24-82 (265)
330 2o03_A Probable zinc uptake re 53.8 13 0.00044 26.4 3.7 25 56-80 51-75 (131)
331 2fe3_A Peroxide operon regulat 53.8 13 0.00045 26.9 3.8 25 56-80 62-86 (145)
332 1u2w_A CADC repressor, cadmium 53.2 11 0.00039 26.3 3.3 41 29-70 36-90 (122)
333 3fm5_A Transcriptional regulat 53.1 21 0.0007 25.4 4.8 54 35-88 39-108 (150)
334 2g1u_A Hypothetical protein TM 52.8 49 0.0017 23.6 6.9 64 174-238 18-90 (155)
335 3pqk_A Biofilm growth-associat 51.8 16 0.00054 24.4 3.7 33 36-70 24-70 (102)
336 3jth_A Transcription activator 49.9 10 0.00036 25.0 2.5 38 31-70 19-70 (98)
337 2xig_A Ferric uptake regulatio 49.4 18 0.0006 26.4 3.9 47 34-80 26-91 (150)
338 3f6o_A Probable transcriptiona 46.5 13 0.00043 25.8 2.6 51 31-84 14-78 (118)
339 3f6v_A Possible transcriptiona 45.3 14 0.00047 27.1 2.8 54 28-84 51-118 (151)
340 2wte_A CSA3; antiviral protein 44.9 13 0.00043 29.8 2.7 48 37-88 154-215 (244)
341 1mzb_A Ferric uptake regulatio 44.6 17 0.00057 26.0 3.1 25 56-80 59-83 (136)
342 4eqs_A Coenzyme A disulfide re 44.5 23 0.00078 30.6 4.5 30 177-206 2-33 (437)
343 1vpt_A VP39; RNA CAP, poly(A) 44.5 17 0.00059 30.4 3.4 53 175-228 76-132 (348)
344 3cuo_A Uncharacterized HTH-typ 44.4 15 0.00053 23.9 2.7 38 32-70 21-72 (99)
345 3c85_A Putative glutathione-re 44.2 28 0.00097 25.6 4.5 63 175-238 39-111 (183)
346 3l4b_C TRKA K+ channel protien 44.1 31 0.0011 26.4 4.8 60 177-238 2-71 (218)
347 3c4a_A Probable tryptophan hyd 44.1 23 0.00079 29.6 4.4 32 177-208 2-35 (381)
348 1r1u_A CZRA, repressor protein 43.0 17 0.00059 24.5 2.8 34 35-70 26-73 (106)
349 3df8_A Possible HXLR family tr 42.5 9 0.00031 26.4 1.3 72 15-88 16-93 (111)
350 1on2_A Transcriptional regulat 41.5 16 0.00054 25.9 2.5 29 56-88 42-70 (142)
351 2aef_A Calcium-gated potassium 40.7 58 0.002 25.0 6.0 60 175-238 9-77 (234)
352 3kp7_A Transcriptional regulat 40.6 82 0.0028 22.0 6.4 51 36-88 39-107 (151)
353 2kko_A Possible transcriptiona 40.6 40 0.0014 22.7 4.4 52 8-70 7-72 (108)
354 2vvp_A Ribose-5-phosphate isom 39.8 13 0.00044 27.8 1.8 53 174-226 60-114 (162)
355 1g55_A DNA cytosine methyltran 39.8 25 0.00085 29.4 3.8 63 176-238 3-74 (343)
356 1m6i_A Programmed cell death p 39.3 29 0.00098 30.4 4.3 33 175-207 11-45 (493)
357 3iwa_A FAD-dependent pyridine 39.1 31 0.0011 29.9 4.5 33 176-208 4-38 (472)
358 3oc4_A Oxidoreductase, pyridin 38.8 30 0.001 29.8 4.3 32 176-207 3-36 (452)
359 2nyx_A Probable transcriptiona 38.5 76 0.0026 22.9 6.0 53 35-88 45-113 (168)
360 3s5p_A Ribose 5-phosphate isom 37.5 15 0.00053 27.5 1.9 53 174-226 77-131 (166)
361 3l9w_A Glutathione-regulated p 37.3 44 0.0015 28.7 5.1 61 176-238 5-74 (413)
362 3he8_A Ribose-5-phosphate isom 36.8 15 0.00052 27.0 1.8 50 177-226 59-110 (149)
363 3e48_A Putative nucleoside-dip 36.8 50 0.0017 26.1 5.1 59 178-238 3-71 (289)
364 2y75_A HTH-type transcriptiona 36.6 54 0.0018 22.7 4.7 25 56-82 46-70 (129)
365 1id1_A Putative potassium chan 36.6 81 0.0028 22.3 5.9 61 176-238 4-77 (153)
366 1s3j_A YUSO protein; structura 36.0 71 0.0024 22.4 5.5 50 37-87 39-104 (155)
367 1o1x_A Ribose-5-phosphate isom 36.0 13 0.00044 27.6 1.2 54 173-226 67-122 (155)
368 3ic5_A Putative saccharopine d 36.0 62 0.0021 21.3 4.9 62 176-238 6-75 (118)
369 2hzt_A Putative HTH-type trans 35.9 29 0.001 23.4 3.1 73 15-88 3-82 (107)
370 1xmk_A Double-stranded RNA-spe 35.9 29 0.001 22.5 2.9 28 56-85 46-73 (79)
371 3ggo_A Prephenate dehydrogenas 35.8 44 0.0015 27.5 4.7 65 175-239 33-101 (314)
372 3c4n_A Uncharacterized protein 35.8 33 0.0011 29.0 4.0 32 176-207 37-70 (405)
373 2f2e_A PA1607; transcription f 35.7 28 0.00097 25.1 3.2 72 16-88 14-90 (146)
374 3b1f_A Putative prephenate deh 35.7 54 0.0019 26.1 5.2 64 176-239 7-73 (290)
375 2jsc_A Transcriptional regulat 35.5 17 0.00057 25.2 1.8 26 56-82 54-79 (118)
376 3fpz_A Thiazole biosynthetic e 34.8 36 0.0012 27.7 4.0 30 177-206 67-98 (326)
377 3ics_A Coenzyme A-disulfide re 34.1 42 0.0014 30.0 4.6 33 174-206 35-69 (588)
378 2pyx_A Tryptophan halogenase; 33.9 26 0.0009 30.9 3.2 33 175-207 7-51 (526)
379 2vvr_A Ribose-5-phosphate isom 33.8 29 0.001 25.5 2.9 54 173-226 56-111 (149)
380 1qbj_A Protein (double-strande 33.4 46 0.0016 21.5 3.5 50 36-87 11-76 (81)
381 2q7x_A UPF0052 protein SP_1565 33.4 30 0.001 29.0 3.2 28 175-202 4-33 (326)
382 3ph3_A Ribose-5-phosphate isom 33.4 15 0.00051 27.7 1.2 53 174-226 76-130 (169)
383 3dfz_A SIRC, precorrin-2 dehyd 33.2 32 0.0011 27.0 3.2 63 174-238 30-97 (223)
384 2bll_A Protein YFBG; decarboxy 33.2 50 0.0017 26.7 4.7 51 177-228 2-56 (345)
385 3ono_A Ribose/galactose isomer 33.1 14 0.00047 29.0 1.1 52 173-224 64-117 (214)
386 3c5y_A Ribose/galactose isomer 33.0 14 0.00048 29.2 1.1 51 174-224 82-134 (231)
387 2cdu_A NADPH oxidase; flavoenz 32.8 45 0.0015 28.6 4.5 31 177-207 2-34 (452)
388 3bdd_A Regulatory protein MARR 32.6 53 0.0018 22.6 4.2 52 36-88 32-99 (142)
389 2ppw_A Conserved domain protei 31.7 12 0.00042 29.3 0.5 52 173-224 65-118 (216)
390 3k7p_A Ribose 5-phosphate isom 31.6 21 0.00072 27.1 1.8 52 175-226 81-134 (179)
391 2e4g_A Tryptophan halogenase; 31.6 40 0.0014 30.0 4.0 33 175-207 25-60 (550)
392 4g6h_A Rotenone-insensitive NA 31.4 36 0.0012 30.0 3.6 32 175-206 42-73 (502)
393 1ub9_A Hypothetical protein PH 31.4 21 0.00071 23.3 1.7 30 56-85 50-81 (100)
394 1nhp_A NADH peroxidase; oxidor 31.4 50 0.0017 28.2 4.5 31 177-207 2-34 (447)
395 1r7j_A Conserved hypothetical 31.0 35 0.0012 22.7 2.7 28 56-88 40-67 (95)
396 3kkj_A Amine oxidase, flavin-c 30.8 37 0.0013 25.5 3.3 30 177-206 4-33 (336)
397 2jt1_A PEFI protein; solution 30.6 40 0.0014 21.6 2.8 15 56-70 44-58 (77)
398 3r0a_A Putative transcriptiona 30.5 36 0.0012 23.6 2.9 34 37-70 28-76 (123)
399 3f3x_A Transcriptional regulat 30.5 57 0.002 22.7 4.1 53 35-89 37-105 (144)
400 1pqw_A Polyketide synthase; ro 30.4 37 0.0013 25.3 3.2 35 172-207 36-72 (198)
401 3h28_A Sulfide-quinone reducta 30.3 39 0.0013 28.8 3.6 31 176-206 3-35 (430)
402 3h8l_A NADH oxidase; membrane 30.1 34 0.0012 28.8 3.2 31 176-206 2-35 (409)
403 1ges_A Glutathione reductase; 30.0 47 0.0016 28.5 4.1 31 176-206 5-35 (450)
404 4hb9_A Similarities with proba 29.9 39 0.0013 28.0 3.5 30 177-206 3-32 (412)
405 2p0y_A Hypothetical protein LP 29.9 29 0.00099 29.2 2.6 28 174-201 9-38 (341)
406 4fzv_A Putative methyltransfer 29.6 54 0.0018 27.7 4.3 66 173-238 147-229 (359)
407 1boo_A Protein (N-4 cytosine-s 29.5 80 0.0027 25.9 5.3 34 173-208 251-284 (323)
408 3sx6_A Sulfide-quinone reducta 29.3 36 0.0012 29.1 3.2 31 176-206 5-38 (437)
409 2aqj_A Tryptophan halogenase, 29.0 42 0.0014 29.6 3.7 33 175-207 5-40 (538)
410 3kd9_A Coenzyme A disulfide re 29.0 55 0.0019 28.0 4.4 32 176-207 4-37 (449)
411 3sgw_A Ribose 5-phosphate isom 28.9 25 0.00085 26.8 1.8 50 177-226 91-142 (184)
412 3lzw_A Ferredoxin--NADP reduct 28.9 40 0.0014 27.0 3.3 31 176-206 8-38 (332)
413 3ntd_A FAD-dependent pyridine 28.7 53 0.0018 29.0 4.3 31 176-206 2-34 (565)
414 2hr3_A Probable transcriptiona 28.7 44 0.0015 23.3 3.1 54 35-88 35-104 (147)
415 1xdi_A RV3303C-LPDA; reductase 28.7 48 0.0017 28.9 4.0 31 177-207 4-37 (499)
416 2weu_A Tryptophan 5-halogenase 28.4 34 0.0012 29.9 3.0 33 176-208 3-38 (511)
417 3lwf_A LIN1550 protein, putati 28.2 77 0.0026 23.2 4.5 49 28-82 26-88 (159)
418 3slg_A PBGP3 protein; structur 28.0 53 0.0018 27.0 4.0 52 175-227 24-79 (372)
419 2w57_A Ferric uptake regulatio 28.0 22 0.00074 25.9 1.4 21 50-70 49-72 (150)
420 3bpv_A Transcriptional regulat 27.9 40 0.0014 23.2 2.8 51 36-88 30-97 (138)
421 1u6z_A Exopolyphosphatase; alp 27.8 29 0.001 30.8 2.4 13 175-187 138-150 (513)
422 3g7u_A Cytosine-specific methy 27.8 88 0.003 26.5 5.3 60 177-238 4-77 (376)
423 3g3z_A NMB1585, transcriptiona 27.6 46 0.0016 23.2 3.1 53 35-88 31-99 (145)
424 3qvo_A NMRA family protein; st 27.1 75 0.0026 24.3 4.5 52 176-228 24-78 (236)
425 1cjc_A Protein (adrenodoxin re 27.0 63 0.0021 28.0 4.4 32 175-206 6-39 (460)
426 2x4h_A Hypothetical protein SS 27.0 41 0.0014 23.4 2.7 27 56-87 51-77 (139)
427 2xdo_A TETX2 protein; tetracyc 27.0 72 0.0025 26.6 4.7 33 175-207 26-58 (398)
428 2htj_A P fimbrial regulatory p 27.0 77 0.0026 19.9 3.8 30 39-69 4-47 (81)
429 3bro_A Transcriptional regulat 27.0 49 0.0017 22.8 3.1 53 36-88 35-104 (141)
430 2gxg_A 146AA long hypothetical 26.9 98 0.0033 21.3 4.8 52 35-88 37-104 (146)
431 2a61_A Transcriptional regulat 26.5 32 0.0011 24.0 2.0 52 36-88 34-101 (145)
432 3mdq_A Exopolyphosphatase; str 26.3 22 0.00075 29.4 1.2 13 174-186 131-143 (315)
433 3bja_A Transcriptional regulat 26.2 35 0.0012 23.5 2.2 52 36-88 34-101 (139)
434 2fsw_A PG_0823 protein; alpha- 26.1 90 0.0031 20.7 4.3 74 14-88 13-93 (107)
435 2fa5_A Transcriptional regulat 26.1 42 0.0014 23.9 2.7 52 36-88 50-117 (162)
436 3u2r_A Regulatory protein MARR 26.0 73 0.0025 22.9 4.0 53 35-88 46-116 (168)
437 3ab1_A Ferredoxin--NADP reduct 26.0 47 0.0016 27.2 3.3 31 176-206 15-45 (360)
438 2r9z_A Glutathione amide reduc 26.0 48 0.0016 28.7 3.4 31 176-206 5-35 (463)
439 1qgp_A Protein (double strande 25.9 55 0.0019 20.8 2.9 45 36-82 15-75 (77)
440 3k0l_A Repressor protein; heli 25.9 47 0.0016 23.8 2.9 53 35-88 46-114 (162)
441 4gcm_A TRXR, thioredoxin reduc 25.8 52 0.0018 26.3 3.4 29 178-206 9-37 (312)
442 3bj6_A Transcriptional regulat 25.8 1.4E+02 0.0048 20.6 5.6 34 36-70 41-88 (152)
443 2hqm_A GR, grase, glutathione 25.7 48 0.0016 28.8 3.4 31 176-206 12-42 (479)
444 3boq_A Transcriptional regulat 25.7 1E+02 0.0035 21.7 4.8 53 36-88 48-116 (160)
445 2zbw_A Thioredoxin reductase; 25.5 52 0.0018 26.5 3.4 31 176-206 6-36 (335)
446 2nnn_A Probable transcriptiona 25.4 35 0.0012 23.5 2.0 52 36-88 39-106 (140)
447 3jw4_A Transcriptional regulat 25.3 89 0.003 21.7 4.3 52 37-88 43-111 (148)
448 2vou_A 2,6-dihydroxypyridine h 25.2 62 0.0021 27.0 3.9 33 175-207 5-37 (397)
449 3nrv_A Putative transcriptiona 25.2 43 0.0015 23.4 2.6 53 35-88 40-108 (148)
450 2h6e_A ADH-4, D-arabinose 1-de 24.9 60 0.0021 26.7 3.7 39 174-212 170-211 (344)
451 1xn7_A Hypothetical protein YH 24.8 68 0.0023 20.5 3.2 29 40-69 7-49 (78)
452 2pex_A Transcriptional regulat 24.7 40 0.0014 23.8 2.3 52 36-88 48-115 (153)
453 3nix_A Flavoprotein/dehydrogen 24.6 65 0.0022 26.9 4.0 32 176-207 6-37 (421)
454 2b69_A UDP-glucuronate decarbo 24.5 1.5E+02 0.005 23.9 6.1 62 175-237 27-96 (343)
455 3e1t_A Halogenase; flavoprotei 24.3 64 0.0022 28.2 4.0 32 176-207 8-39 (512)
456 3qj4_A Renalase; FAD/NAD(P)-bi 24.1 66 0.0023 26.1 3.8 31 177-207 3-36 (342)
457 3eyy_A Putative iron uptake re 24.0 34 0.0011 24.7 1.7 31 40-70 39-72 (145)
458 3klj_A NAD(FAD)-dependent dehy 24.0 69 0.0024 27.0 4.0 33 174-206 8-40 (385)
459 3dme_A Conserved exported prot 23.9 54 0.0019 26.6 3.3 31 177-207 6-36 (369)
460 4em8_A Ribose 5-phosphate isom 23.8 44 0.0015 24.5 2.3 49 178-226 66-116 (148)
461 3cdh_A Transcriptional regulat 23.8 44 0.0015 23.6 2.4 52 36-88 44-111 (155)
462 1t6c_A Exopolyphosphatase; alp 23.7 24 0.00082 29.2 1.0 13 175-187 139-151 (315)
463 3cgb_A Pyridine nucleotide-dis 23.6 77 0.0026 27.4 4.3 31 176-206 37-69 (480)
464 3f8d_A Thioredoxin reductase ( 23.6 60 0.0021 25.7 3.4 31 176-206 16-46 (323)
465 1r1t_A Transcriptional repress 23.6 65 0.0022 22.3 3.2 35 34-70 45-93 (122)
466 3tos_A CALS11; methyltransfera 23.5 76 0.0026 25.4 3.9 33 174-206 69-108 (257)
467 2qww_A Transcriptional regulat 23.5 1.9E+02 0.0064 20.0 6.3 52 36-88 42-111 (154)
468 4fk1_A Putative thioredoxin re 23.5 61 0.0021 25.9 3.4 29 178-206 9-37 (304)
469 2xvc_A ESCRT-III, SSO0910; cel 23.4 54 0.0018 19.9 2.2 33 37-69 12-58 (59)
470 3cb2_A Gamma-1-tubulin, tubuli 23.4 1.5E+02 0.0052 26.0 6.1 34 166-200 127-165 (475)
471 3ew7_A LMO0794 protein; Q8Y8U8 23.4 1.2E+02 0.004 22.4 5.0 58 177-237 2-66 (221)
472 3r6d_A NAD-dependent epimerase 23.1 95 0.0033 23.2 4.4 51 177-228 7-63 (221)
473 2h09_A Transcriptional regulat 23.1 62 0.0021 23.0 3.1 29 56-88 74-102 (155)
474 2dph_A Formaldehyde dismutase; 23.0 76 0.0026 26.7 4.1 43 172-214 183-227 (398)
475 1yyv_A Putative transcriptiona 23.0 91 0.0031 21.9 3.9 75 13-88 22-103 (131)
476 1zk7_A HGII, reductase, mercur 22.9 74 0.0025 27.3 4.1 32 176-207 5-36 (467)
477 1p6r_A Penicillinase repressor 22.8 56 0.0019 20.5 2.5 19 52-70 43-61 (82)
478 1fec_A Trypanothione reductase 22.8 47 0.0016 29.0 2.8 29 177-205 5-34 (490)
479 1z7u_A Hypothetical protein EF 22.8 46 0.0016 22.5 2.2 73 15-88 11-90 (112)
480 3fbs_A Oxidoreductase; structu 22.7 65 0.0022 25.2 3.4 30 177-206 4-33 (297)
481 3fg2_P Putative rubredoxin red 22.7 72 0.0025 26.8 3.9 31 176-206 2-34 (404)
482 3deu_A Transcriptional regulat 22.4 48 0.0016 24.1 2.4 54 35-88 53-122 (166)
483 4dgk_A Phytoene dehydrogenase; 22.4 55 0.0019 28.2 3.1 33 176-208 2-34 (501)
484 1jgs_A Multiple antibiotic res 22.2 52 0.0018 22.6 2.4 51 37-88 36-102 (138)
485 1onf_A GR, grase, glutathione 22.1 63 0.0021 28.2 3.4 30 177-206 4-33 (500)
486 3jsk_A Cypbp37 protein; octame 22.1 88 0.003 26.2 4.2 32 176-207 80-113 (344)
487 1k0i_A P-hydroxybenzoate hydro 22.0 48 0.0016 27.6 2.6 32 177-208 4-35 (394)
488 3atr_A Conserved archaeal prot 22.0 64 0.0022 27.6 3.4 32 176-207 7-38 (453)
489 3cty_A Thioredoxin reductase; 22.0 68 0.0023 25.6 3.4 31 176-206 17-47 (319)
490 3h2s_A Putative NADH-flavin re 21.8 70 0.0024 23.9 3.3 58 178-237 3-67 (224)
491 1ps9_A 2,4-dienoyl-COA reducta 21.8 98 0.0034 28.2 4.8 32 175-206 373-404 (671)
492 3ic9_A Dihydrolipoamide dehydr 21.7 84 0.0029 27.3 4.2 30 177-206 10-39 (492)
493 3oop_A LIN2960 protein; protei 21.7 36 0.0012 23.7 1.5 53 35-88 37-105 (143)
494 2k02_A Ferrous iron transport 21.6 65 0.0022 21.2 2.6 30 40-70 7-50 (87)
495 2x3n_A Probable FAD-dependent 21.6 63 0.0022 26.9 3.3 31 176-206 7-37 (399)
496 2c0c_A Zinc binding alcohol de 21.5 90 0.0031 25.9 4.2 35 172-207 161-197 (362)
497 3cgv_A Geranylgeranyl reductas 21.5 64 0.0022 26.6 3.3 32 177-208 6-37 (397)
498 1eg2_A Modification methylase 21.4 1.3E+02 0.0045 24.7 5.1 34 173-208 241-274 (319)
499 3e6m_A MARR family transcripti 21.4 1.3E+02 0.0046 21.2 4.7 51 37-88 55-121 (161)
500 1rp0_A ARA6, thiazole biosynth 21.3 95 0.0032 24.6 4.2 31 177-207 41-72 (284)
No 1
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=100.00 E-value=1.8e-38 Score=276.37 Aligned_cols=220 Identities=19% Similarity=0.303 Sum_probs=193.2
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccc
Q 046950 14 QGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYG 79 (239)
Q Consensus 14 ~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~ 79 (239)
++.+.|++++.|++.+++|++|++|||||.|++.++|+|++| +||+|+++|+|++... ++.+.|+
T Consensus 7 ~~~~~L~~l~~Gf~~s~~L~aa~eLglfd~L~~~~~p~t~~eLA~~~g~~~~~l~rlLr~L~~~gll~~~~~-~~~~~y~ 85 (353)
T 4a6d_A 7 QAYRLLNDYANGFMVSQVLFAACELGVFDLLAEAPGPLDVAAVAAGVRASAHGTELLLDICVSLKLLKVETR-GGKAFYR 85 (353)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHSSSCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEE-TTEEEEE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHhcCCCCCCHHHHHHhhCcCHHHHHHHHHHHHHCCCEEEecc-Cccceee
Confidence 567789999999999999999999999999988667999887 8999999999987542 1245799
Q ss_pred cCcccc-ccccCcCCcccchhhcccCccccchhhhhHHhhcCCCCChhHHhhC---CChhhhcccCchHHHHHHHHHhhc
Q 046950 80 LTAAST-LLIKDKPYCLSPTVSVFVDPFFVAPFQSLSSWFKGTEITLWETVHG---IKFWEFMNQNPAINQRFNEAMASD 155 (239)
Q Consensus 80 ~t~~s~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~f~~~~g---~~~~e~~~~~~~~~~~f~~~m~~~ 155 (239)
+|++++ +|.++++.++++++.+.. +..+..|.+|.+.+++++ ++|...+| .++|+++.++|+....|+++|...
T Consensus 86 ~t~~s~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~L~~~vr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~f~~aM~~~ 163 (353)
T 4a6d_A 86 NTELSSDYLTTVSPTSQCSMLKYMG-RTSYRCWGHLADAVREGR-NQYLETFGVPAEELFTAIYRSEGERLQFMQALQEV 163 (353)
T ss_dssp ECHHHHHHHSTTSTTCCHHHHHHHH-HTHHHHHTTHHHHHHHTS-CCHHHHHSCCCSSHHHHHTSSHHHHHHHHHHHHTT
T ss_pred CCHHHHHHhhcCCchHHHHHHHHhC-HHHHHHHHHHHHHHhcCC-ChhHHhcCCChHHHHHHHhhCHHHHHHHHHHHHHH
Confidence 999997 567778888988887753 466889999999999998 67888887 478999999999999999999998
Q ss_pred hhhhHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC------CCCeEEEEccCCCC
Q 046950 156 SEIMTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE------ADNLKYIAGDMFRF 229 (239)
Q Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~------~~ri~~~~gD~f~~ 229 (239)
+....+.++ +.++ +++.++|||||||+|.++.+++++||+++++++|+|+|++.+++ .+||++++||||++
T Consensus 164 ~~~~~~~~~-~~~~--~~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dlp~v~~~a~~~~~~~~~~rv~~~~gD~~~~ 240 (353)
T 4a6d_A 164 WSVNGRSVL-TAFD--LSVFPLMCDLGGGAGALAKECMSLYPGCKITVFDIPEVVWTAKQHFSFQEEEQIDFQEGDFFKD 240 (353)
T ss_dssp HHHHHHHHH-HSSC--GGGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEECHHHHHHHHHHSCC--CCSEEEEESCTTTS
T ss_pred HHHHHHHHH-HhcC--cccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccCHHHHHHHHHhhhhcccCceeeecCccccC
Confidence 888888889 9998 78889999999999999999999999999999999999987653 68999999999986
Q ss_pred -CCCceEEEeC
Q 046950 230 -IPPADAFLFK 239 (239)
Q Consensus 230 -~p~~D~~~l~ 239 (239)
.|.+|+|+|+
T Consensus 241 ~~~~~D~~~~~ 251 (353)
T 4a6d_A 241 PLPEADLYILA 251 (353)
T ss_dssp CCCCCSEEEEE
T ss_pred CCCCceEEEee
Confidence 4559999985
No 2
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=100.00 E-value=2.2e-36 Score=264.26 Aligned_cols=229 Identities=28% Similarity=0.451 Sum_probs=200.2
Q ss_pred ChhhhchHHHHHHHHHHhHHHHHHHHHHHHhChhhHhhhCC-CCCCHHH-------------------HHHHHHhCCcee
Q 046950 8 GAKELFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHG-RAITLSE-------------------LMRLLVHSGCFK 67 (239)
Q Consensus 8 ~~~~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~-~~~t~~e-------------------lLr~L~~~g~l~ 67 (239)
...+..+....+++++.+++.+++|++|+++|||++|++++ +|.|++| +||+|++.|+|+
T Consensus 13 ~~~~~~~~~~~~~~l~~~~~~~~~l~~a~~Lgifd~L~~~g~~~~t~~eLA~~~g~~~~~~~~~~l~rlLr~L~~~g~l~ 92 (364)
T 3p9c_A 13 AASADEDACMFALQLASSSVLPMTLKNAIELGLLEILVAAGGKSLTPTEVAAKLPSAANPEAPDMVDRILRLLASYNVVT 92 (364)
T ss_dssp CHHHHHHHHHHHHHHTTTTHHHHHHHHHHHHTHHHHHHHTTTCCBCHHHHHHTTTCTTCTTHHHHHHHHHHHHHHTTSEE
T ss_pred cchHHHHHHHHHHHHHHhHHHHHHHHHHHHCChHHHHhhcCCCCCCHHHHHHhcCCCCCccchhhHHHHHHHHHhCCCEE
Confidence 55667889999999999999999999999999999998853 5777665 789999999999
Q ss_pred eeccC--CC--ccccccCccccccccC-cCCcccchhhcccCccccchhhhhHHhhcCCCCChhHHhhCCChhhhcccCc
Q 046950 68 KTKVN--GE--EEAYGLTAASTLLIKD-KPYCLSPTVSVFVDPFFVAPFQSLSSWFKGTEITLWETVHGIKFWEFMNQNP 142 (239)
Q Consensus 68 ~~~~~--~~--~~~y~~t~~s~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~f~~~~g~~~~e~~~~~~ 142 (239)
+.... ++ +++|++|+.++.|..+ .+.++++++.+..++.++..|.+|.+++++++ +||+..+|.++|+|+.++|
T Consensus 93 ~~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~r~g~-~~~~~~~g~~~~~~~~~~~ 171 (364)
T 3p9c_A 93 CLVEEGKDGRLSRSYGAAPVCKFLTPNEDGVSMAALALMNQDKVLMESWYYLKDAVLDGG-IPFNKAYGMSAFEYHGTDP 171 (364)
T ss_dssp EEEEECSSSCEEEEEEECGGGGGSSCCTTSCCTHHHHHHHTSHHHHGGGGGHHHHHHHCS-CHHHHHHSSCHHHHHTTCH
T ss_pred EeccccCCCCcCCEEecCHHHHHHcCCCCCCCHHHHHHHhcCHHHHHHHhCHHHHHhhCC-ChHHHhcCCCHHHHHHhCH
Confidence 87310 00 2689999999988764 46789988877656667899999999999988 8999999999999999999
Q ss_pred hHHHHHHHHHhhchhhhHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCCCCCeEEE
Q 046950 143 AINQRFNEAMASDSEIMTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYI 222 (239)
Q Consensus 143 ~~~~~f~~~m~~~~~~~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~~~ri~~~ 222 (239)
+..+.|+++|...+....+.++ +.++ .+++..+|||||||+|.++..+++++|+++++++|+|++++.+++.+||+++
T Consensus 172 ~~~~~f~~~m~~~~~~~~~~~~-~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~ 249 (364)
T 3p9c_A 172 RFNRVFNEGMKNHSIIITKKLL-ELYH-GFEGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDLPHVISEAPQFPGVTHV 249 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEEE
T ss_pred HHHHHHHHHHHHhhHHHHHHHH-Hhcc-cccCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecCHHHHHhhhhcCCeEEE
Confidence 9999999999988877777788 8776 3677889999999999999999999999999999999999999988899999
Q ss_pred EccCCCCCCCceEEEeC
Q 046950 223 AGDMFRFIPPADAFLFK 239 (239)
Q Consensus 223 ~gD~f~~~p~~D~~~l~ 239 (239)
.+|+|+++|..|+|+++
T Consensus 250 ~~D~~~~~p~~D~v~~~ 266 (364)
T 3p9c_A 250 GGDMFKEVPSGDTILMK 266 (364)
T ss_dssp ECCTTTCCCCCSEEEEE
T ss_pred eCCcCCCCCCCCEEEeh
Confidence 99999988878999874
No 3
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=100.00 E-value=1.3e-35 Score=259.67 Aligned_cols=229 Identities=27% Similarity=0.459 Sum_probs=197.4
Q ss_pred ChhhhchHHHHHHHHHHhHHHHHHHHHHHHhChhhHhhhC---CCCCCHHH------------------HHHHHHhCCce
Q 046950 8 GAKELFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSH---GRAITLSE------------------LMRLLVHSGCF 66 (239)
Q Consensus 8 ~~~~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~---~~~~t~~e------------------lLr~L~~~g~l 66 (239)
...+..+....+++++.+++.+++|++|+++|||++|++. ++|.|++| +||+|++.|+|
T Consensus 14 ~~~~~~~~~~~~~~l~~~~~~~~~l~~a~~Lglfd~L~~~~gp~~~~t~~eLA~~~~~~~~~~~~~l~rlLr~L~~~gll 93 (368)
T 3reo_A 14 THSSDEEANLFAMQLASAAVLPMALKAAIELDVLEIMAKSVPPSGYISPAEIAAQLPTTNPEAPVMLDRVLRLLASYSVV 93 (368)
T ss_dssp ---CHHHHHHHHHHHHTTTHHHHHHHHHHHTTHHHHHHHHCCTTCCBCHHHHHTTSSCCCTTHHHHHHHHHHHHHHTTSE
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHCCchhHHhhcCCCCCCcCHHHHHHhcCcCCCcchhhHHHHHHHHHhCCCe
Confidence 3345677889999999999999999999999999999873 24677776 89999999999
Q ss_pred eeeccC--CC--ccccccCccccccccC-cCCcccchhhcccCccccchhhhhHHhhcCCCCChhHHhhCCChhhhcccC
Q 046950 67 KKTKVN--GE--EEAYGLTAASTLLIKD-KPYCLSPTVSVFVDPFFVAPFQSLSSWFKGTEITLWETVHGIKFWEFMNQN 141 (239)
Q Consensus 67 ~~~~~~--~~--~~~y~~t~~s~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~f~~~~g~~~~e~~~~~ 141 (239)
++.... ++ +++|++|+.++.|..+ ++.++++++.+..++.++..|.+|++++++++ ++|+.++|.++|+|+.++
T Consensus 94 ~~~~~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~r~g~-~~~~~~~g~~~~~~~~~~ 172 (368)
T 3reo_A 94 TYTLRELPSGKVERLYGLAPVCKFLTKNEDGVSLAPFLLLATDKVLLEPWFYLKDAILEGG-IPFNKAYGMNIFDYHGTD 172 (368)
T ss_dssp EEEEEECTTSCEEEEEEECTTHHHHSCCTTSCCSHHHHHHHTCHHHHGGGGGHHHHHHHCS-CHHHHHSSSCHHHHHTTC
T ss_pred EEecccCCCCcccceeCcCHHHHHHhCCCCCCCHHHHHHHhcCHHHHhhhhchHHHHhcCC-CHHHHHhCCCHHHHHhhC
Confidence 986210 01 2689999999977754 46789988877655667889999999999988 799999999999999999
Q ss_pred chHHHHHHHHHhhchhhhHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCCCCCeEE
Q 046950 142 PAINQRFNEAMASDSEIMTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKY 221 (239)
Q Consensus 142 ~~~~~~f~~~m~~~~~~~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~~~ri~~ 221 (239)
|+..+.|+++|...+....+.++ +.++ .+++..+|||||||+|.++..+++++|+++++++|+|++++.+++.+||++
T Consensus 173 ~~~~~~f~~~m~~~~~~~~~~~~-~~~~-~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~ 250 (368)
T 3reo_A 173 HRINKVFNKGMSSNSTITMKKIL-EMYN-GFEGLTTIVDVGGGTGAVASMIVAKYPSINAINFDLPHVIQDAPAFSGVEH 250 (368)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH-TTCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCCTTEEE
T ss_pred HHHHHHHHHHHHhhhhhHHHHHH-Hhcc-cccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEehHHHHHhhhhcCCCEE
Confidence 99999999999988877777788 8776 367788999999999999999999999999999999999999988889999
Q ss_pred EEccCCCCCCCceEEEeC
Q 046950 222 IAGDMFRFIPPADAFLFK 239 (239)
Q Consensus 222 ~~gD~f~~~p~~D~~~l~ 239 (239)
+.+|+++++|..|+|+++
T Consensus 251 ~~~d~~~~~p~~D~v~~~ 268 (368)
T 3reo_A 251 LGGDMFDGVPKGDAIFIK 268 (368)
T ss_dssp EECCTTTCCCCCSEEEEE
T ss_pred EecCCCCCCCCCCEEEEe
Confidence 999999998878999874
No 4
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=100.00 E-value=2.1e-35 Score=256.48 Aligned_cols=217 Identities=23% Similarity=0.384 Sum_probs=195.2
Q ss_pred hchHHHHHHHHHHhHHHHHHHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccc
Q 046950 12 LFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEA 77 (239)
Q Consensus 12 ~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~ 77 (239)
..++..++++++.|++.+.+|++|+++|||++|++ +|.|++| +||+|++.|+|++ . +++
T Consensus 19 ~~~~~~~l~~~~~~~~~~~~l~~a~~lglf~~l~~--g~~t~~elA~~~g~~~~~l~rlLr~l~~~g~l~~-~----~~~ 91 (348)
T 3lst_A 19 RLQSALALYEEAMGYTYAAALRAAAAVGVADHLVD--GPRTPAELAAATGTDADALRRVLRLLAVRDVVRE-S----DGR 91 (348)
T ss_dssp HHHHHHHHHHHHTTHHHHHHHHHHHHHTGGGGGTT--SCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEE-E----TTE
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHcCchhHhhC--CCCCHHHHHHHhCcCHHHHHHHHHHHHhCCCEEe-c----CCE
Confidence 56788999999999999999999999999999986 6999988 8999999999999 4 689
Q ss_pred cccCccccccccCcCCcccchhhcccCccccchhhhhHHhhcCCCCChhHHhhCCChhhhcccCchHHHHHHHHHhhchh
Q 046950 78 YGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPFQSLSSWFKGTEITLWETVHGIKFWEFMNQNPAINQRFNEAMASDSE 157 (239)
Q Consensus 78 y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~f~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~ 157 (239)
|++|+.|+.|.++++.++.+++.+..++.++..|.+|+++++++. ++|+..+|.++|+|+.++|+..+.|+++|...+.
T Consensus 92 y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~ 170 (348)
T 3lst_A 92 FALTDKGAALRSDSPVPARAGILMFTDTMFWTMSHRVASALGPER-PAFADIFGSSLDAYFDGDAEVEALYYEGMETVSA 170 (348)
T ss_dssp EEECTTTGGGSTTSSSCSHHHHHHHTSHHHHHHHHTHHHHTCTTC-CCHHHHHSSCHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred EecCHHHHHHhcCCCccHHHHHHHhcCHHHHHHHHHHHHHHhcCC-ChhhHHhCCCHHHHHHhCHHHHHHHHHHHHHhhh
Confidence 999999998888777788888877655556789999999999887 7899999999999999999999999999999888
Q ss_pred hhHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-----CCCeEEEEccCCCCCCC
Q 046950 158 IMTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-----ADNLKYIAGDMFRFIPP 232 (239)
Q Consensus 158 ~~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-----~~ri~~~~gD~f~~~p~ 232 (239)
...+.++ +.++ +++..+|||||||+|.++..+++++|+++++++|+|+++..... .+||+++.+|+++++|.
T Consensus 171 ~~~~~~~-~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~~~~~~~~~~~~v~~~~~d~~~~~p~ 247 (348)
T 3lst_A 171 AEHLILA-RAGD--FPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDRAEVVARHRLDAPDVAGRWKVVEGDFLREVPH 247 (348)
T ss_dssp TTHHHHH-HHSC--CCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEECHHHHTTCCCCCGGGTTSEEEEECCTTTCCCC
T ss_pred hhHHHHH-HhCC--ccCCceEEEECCccCHHHHHHHHHCCCCEEEEecCHHHhhcccccccCCCCCeEEEecCCCCCCCC
Confidence 7778888 8888 77889999999999999999999999999999999998884331 56899999999988889
Q ss_pred ceEEEeC
Q 046950 233 ADAFLFK 239 (239)
Q Consensus 233 ~D~~~l~ 239 (239)
+|+|+++
T Consensus 248 ~D~v~~~ 254 (348)
T 3lst_A 248 ADVHVLK 254 (348)
T ss_dssp CSEEEEE
T ss_pred CcEEEEe
Confidence 9999873
No 5
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=100.00 E-value=3.2e-35 Score=255.67 Aligned_cols=226 Identities=46% Similarity=0.853 Sum_probs=199.4
Q ss_pred hhhhchHHHHHHHHHHhHHHHHHHHHHHHhChhhHhhhCCCCCCHHH-----------------HHHHHHhCCceeeecc
Q 046950 9 AKELFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSE-----------------LMRLLVHSGCFKKTKV 71 (239)
Q Consensus 9 ~~~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~t~~e-----------------lLr~L~~~g~l~~~~~ 71 (239)
+++++++..++++++.+++.+.+|++|+++|||+.|+..++|.|++| +||+|++.|+|++..
T Consensus 10 ~~~~~~a~~~l~~~~~~~~~~~~l~~a~~lgif~~L~~~~~~~t~~ela~~~~~~~~~~~~l~rlLr~L~~~gll~~~~- 88 (352)
T 1fp2_A 10 PSEIFKAQALLYKHIYAFIDSMSLKWAVEMNIPNIIQNHGKPISLSNLVSILQVPSSKIGNVRRLMRYLAHNGFFEIIT- 88 (352)
T ss_dssp STHHHHHHHHHHHHHTTHHHHHHHHHHHHTTHHHHHHHHTSCEEHHHHHHHHTCCGGGHHHHHHHHHHHHHTTSEEEEE-
T ss_pred hHHHhhHHHHHHHHHHHHHHHHHHHHHHHCChhhhhhhcCCCccHHHHHHHhCcCCCChHHHHHHHHHHHhCCeEEEec-
Confidence 46788999999999999999999999999999999987545888877 899999999999872
Q ss_pred CCCccccccCccccccccCcCCcccchhhcccCccccchhhhhHHhhc-CCCCChhHHhhCCChhhhcccCchHHHHHHH
Q 046950 72 NGEEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPFQSLSSWFK-GTEITLWETVHGIKFWEFMNQNPAINQRFNE 150 (239)
Q Consensus 72 ~~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~~~~~f~~~~g~~~~e~~~~~~~~~~~f~~ 150 (239)
++++.|++|+.|+.|.++++.++++++.+..++.++..|.+|+++++ ++. ++|+.++|.++|+|+.++|+..+.|++
T Consensus 89 -~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~ 166 (352)
T 1fp2_A 89 -KEEESYALTVASELLVRGSDLCLAPMVECVLDPTLSGSYHELKKWIYEEDL-TLFGVTLGSGFWDFLDKNPEYNTSFND 166 (352)
T ss_dssp -SSSEEEEECHHHHTTSTTSSSCCHHHHHHHTCHHHHHGGGGHHHHHTCSSC-CHHHHHHSSCHHHHHHHCHHHHHHHHH
T ss_pred -CCCCeEeCCHHHHHHhCCCCccHHHHHHHhcCchHHHHHHHHHHHHHhcCC-ChHHHHcCCCHHHHHHhChHHHHHHHH
Confidence 01589999999999998877789998887655566789999999999 665 899999999999999999999999999
Q ss_pred HHhhchhhhHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCCCCCeEEEEccCCCCC
Q 046950 151 AMASDSEIMTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYIAGDMFRFI 230 (239)
Q Consensus 151 ~m~~~~~~~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~~~ri~~~~gD~f~~~ 230 (239)
+|...+....+. + +.+++.+++..+|||||||+|.++..+++++|+++++++|+|.+++.+++..+|+++.+|+++++
T Consensus 167 ~m~~~~~~~~~~-~-~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~~d~~~~~ 244 (352)
T 1fp2_A 167 AMASDSKLINLA-L-RDCDFVFDGLESIVDVGGGTGTTAKIICETFPKLKCIVFDRPQVVENLSGSNNLTYVGGDMFTSI 244 (352)
T ss_dssp HHHHTHHHHHHH-H-HTCHHHHTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTTCCCBTTEEEEECCTTTCC
T ss_pred HHHhcchhhhhH-H-HhcccccccCceEEEeCCCccHHHHHHHHHCCCCeEEEeeCHHHHhhcccCCCcEEEeccccCCC
Confidence 999888766666 7 77733377788999999999999999999999999999999999999987677999999999988
Q ss_pred CCceEEEeC
Q 046950 231 PPADAFLFK 239 (239)
Q Consensus 231 p~~D~~~l~ 239 (239)
|.+|+|+++
T Consensus 245 p~~D~v~~~ 253 (352)
T 1fp2_A 245 PNADAVLLK 253 (352)
T ss_dssp CCCSEEEEE
T ss_pred CCccEEEee
Confidence 889999873
No 6
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=100.00 E-value=3.9e-35 Score=255.65 Aligned_cols=228 Identities=49% Similarity=0.846 Sum_probs=198.6
Q ss_pred hhhchHHHHHHHHHHhHHHHHHHHHHHHhChhhHhhhCCCCCCHHH-----------------HHHHHHhCCceeee---
Q 046950 10 KELFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSE-----------------LMRLLVHSGCFKKT--- 69 (239)
Q Consensus 10 ~~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~t~~e-----------------lLr~L~~~g~l~~~--- 69 (239)
++++++..++++++.+++.+.+|++|+++|||++|+..++|.|++| +||+|++.|+|++.
T Consensus 5 ~~~~~~~~~l~~~~~~~~~~~~l~~a~~lgif~~L~~~~~~~t~~eLA~~~g~~~~~~~~l~rlLr~L~~~gll~~~~~~ 84 (358)
T 1zg3_A 5 SELYHAQIHLYKHVYNFVSSMALKSAMELGIADAIHNHGKPMTLSELASSLKLHPSKVNILHRFLRLLTHNGFFAKTIVK 84 (358)
T ss_dssp SCCTTHHHHHHHHHTTHHHHHHHHHHHHHTHHHHHHHHTSCEEHHHHHHHTTCCTTTHHHHHHHHHHHHHTTSEEEEEEC
T ss_pred HHhhhHHHHHHHHHHHHHHHHHHHHHHHCChHhHHhhcCCCcCHHHHHHhcCCCCcchHHHHHHHHHHhhCCcEEEeccc
Confidence 5788899999999999999999999999999999987545888777 89999999999987
Q ss_pred --c-cCCCccccccCccccccccCcCCcccchhhcccCccccchhhhhHHhhcCCC-CChhHHhhCCChhhhcccCchHH
Q 046950 70 --K-VNGEEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPFQSLSSWFKGTE-ITLWETVHGIKFWEFMNQNPAIN 145 (239)
Q Consensus 70 --~-~~~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~f~~~~g~~~~e~~~~~~~~~ 145 (239)
. ....++.|++|+.++.|+++++.++++++.+..++.++..|.+|+++++++. .++|+.++|.++|+|+.++|+..
T Consensus 85 ~~~~~g~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~~g~~~~~~~~~~p~~~ 164 (358)
T 1zg3_A 85 GKEGDEEEEIAYSLTPPSKLLISGKPTCLSSIVKGALHPSSLDMWSSSKKWFNEDKEQTLFECATGESFWDFLNKDSESS 164 (358)
T ss_dssp CSSSSCCCEEEEEECHHHHTTCTTSTTCCHHHHHHHTSHHHHGGGGGHHHHHHCSCCCCHHHHHHSSCHHHHHTSGGGHH
T ss_pred ccccCCCCCCEEeCCHHHHHHhCCCCccHHHHHHHhcCcHHHHHHHHHHHHHhCCCCCChHHHHhCCCHHHHHhcChhhh
Confidence 1 0000278999999999988877789998887655567889999999999984 38899999999999999999999
Q ss_pred H--HHHHHHhhchhhhHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCCCCCeEEEE
Q 046950 146 Q--RFNEAMASDSEIMTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYIA 223 (239)
Q Consensus 146 ~--~f~~~m~~~~~~~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~~~ri~~~~ 223 (239)
+ .|+++|...+.... .++ +.+++.+.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++..+|+++.
T Consensus 165 ~~~~f~~~m~~~~~~~~-~~~-~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~v~~~~ 242 (358)
T 1zg3_A 165 TLSMFQDAMASDSRMFK-LVL-QENKRVFEGLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQPQVVGNLTGNENLNFVG 242 (358)
T ss_dssp HHHHHHHHHHHHHHTHH-HHH-HHTHHHHHTCSEEEEETCTTSHHHHHHHHHCTTSEEEEEECHHHHSSCCCCSSEEEEE
T ss_pred hHHHHHHHHhcccHHHH-HHH-HhcchhccCCCEEEEECCCcCHHHHHHHHHCCCCeEEEeccHHHHhhcccCCCcEEEe
Confidence 9 99999998877665 778 8884336778899999999999999999999999999999999999988767799999
Q ss_pred ccCCCCCCCceEEEeC
Q 046950 224 GDMFRFIPPADAFLFK 239 (239)
Q Consensus 224 gD~f~~~p~~D~~~l~ 239 (239)
+|+++++|.+|+|+++
T Consensus 243 ~d~~~~~~~~D~v~~~ 258 (358)
T 1zg3_A 243 GDMFKSIPSADAVLLK 258 (358)
T ss_dssp CCTTTCCCCCSEEEEE
T ss_pred CccCCCCCCceEEEEc
Confidence 9999988889999874
No 7
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=100.00 E-value=8.8e-35 Score=254.49 Aligned_cols=218 Identities=26% Similarity=0.505 Sum_probs=195.8
Q ss_pred hchHHHHHHHHHHhHHHHHHHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccc
Q 046950 12 LFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEA 77 (239)
Q Consensus 12 ~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~ 77 (239)
-.+...++++++.+++.+.+|++|+++|||++|++ +|.|++| +||+|++.|+|++.. +++
T Consensus 35 ~~~~~~~l~~l~~~~~~~~~l~~a~~lglf~~l~~--g~~t~~eLA~~~g~~~~~l~rlLr~L~~~g~l~~~~----~~~ 108 (369)
T 3gwz_A 35 RAAAEETVNDILQGAWKARAIHVAVELGVPELLQE--GPRTATALAEATGAHEQTLRRLLRLLATVGVFDDLG----HDD 108 (369)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGTT--SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSSEECS----STT
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHCChhhhhcC--CCCCHHHHHHHHCcCHHHHHHHHHHHHhCCCEEEeC----CCc
Confidence 44678899999999999999999999999999986 7999988 899999999999975 578
Q ss_pred -cccCccccccccCcCCcccchhhcccCccccchhhhhHHhhcCCCCChhHHhhCCChhhhcccCchHHHHHHHHHhhch
Q 046950 78 -YGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPFQSLSSWFKGTEITLWETVHGIKFWEFMNQNPAINQRFNEAMASDS 156 (239)
Q Consensus 78 -y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~f~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~ 156 (239)
|.+|+.++.|.++.+.++.+++.+..++..+..|.+|.++++++. ++|...+|.++|+|+.++|+..+.|+++|...+
T Consensus 109 ~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~ 187 (369)
T 3gwz_A 109 LFAQNALSAVLLPDPASPVATDARFQAAPWHWRAWEQLTHSVRTGE-ASFDVANGTSFWQLTHEDPKARELFNRAMGSVS 187 (369)
T ss_dssp EEECCHHHHTTSCCTTCHHHHHHHHHHSHHHHHHHHTHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHH
T ss_pred eEecCHHHHHHhcCCchhHHHHHHHcCCHHHHHHHHhHHHHHhCCC-ChhHhhcCCCHHHHHHhCHHHHHHHHHHHHHHH
Confidence 999999999888877788888877655446789999999999988 789999998999999999999999999999888
Q ss_pred hhhHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCCeEEEEccCCCC
Q 046950 157 EIMTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMFRF 229 (239)
Q Consensus 157 ~~~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~ri~~~~gD~f~~ 229 (239)
....+.++ +.++ +.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+||+++.+|++++
T Consensus 188 ~~~~~~l~-~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~ 264 (369)
T 3gwz_A 188 LTEAGQVA-AAYD--FSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLERPPVAEEARELLTGRGLADRCEILPGDFFET 264 (369)
T ss_dssp HHHHHHHH-HHSC--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTTC
T ss_pred hhhHHHHH-HhCC--CccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcCHHHHHHHHHhhhhcCcCCceEEeccCCCCC
Confidence 87778888 8887 67789999999999999999999999999999999999888763 57899999999999
Q ss_pred CCC-ceEEEeC
Q 046950 230 IPP-ADAFLFK 239 (239)
Q Consensus 230 ~p~-~D~~~l~ 239 (239)
+|. +|+|+++
T Consensus 265 ~p~~~D~v~~~ 275 (369)
T 3gwz_A 265 IPDGADVYLIK 275 (369)
T ss_dssp CCSSCSEEEEE
T ss_pred CCCCceEEEhh
Confidence 995 9999874
No 8
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=100.00 E-value=1.1e-34 Score=250.15 Aligned_cols=214 Identities=23% Similarity=0.357 Sum_probs=189.1
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccC
Q 046950 16 QAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLT 81 (239)
Q Consensus 16 ~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t 81 (239)
..++++++.|++.+.+|++|+++|||++|.+ +|.|++| +||+|++.|+++++. ++.|.+|
T Consensus 6 ~~~l~~~~~g~~~~~~l~~a~~lglf~~l~~--g~~t~~elA~~~~~~~~~l~rlLr~l~~~gl~~~~~----~~~y~~t 79 (332)
T 3i53_A 6 AHIGLRALADLATPMAVRVAATLRVADHIAA--GHRTAAEIASAAGAHADSLDRLLRHLVAVGLFTRDG----QGVYGLT 79 (332)
T ss_dssp CSSCHHHHTCCHHHHHHHHHHHHTHHHHHHT--TCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECT----TSBEEEC
T ss_pred HHHHHHHHHhhHHHHHHHHHHHcChHHHHhc--CCCCHHHHHHHHCcCHHHHHHHHHHHHhCCcEEecC----CCeEEcC
Confidence 4467899999999999999999999999986 6999988 899999999999975 6899999
Q ss_pred ccccccccCcCCcccchhhcccCcccc-chhhhhHHhhcCCCCChhHHhhCCChhhhcccCchHHHHHHHHHhhchhhhH
Q 046950 82 AASTLLIKDKPYCLSPTVSVFVDPFFV-APFQSLSSWFKGTEITLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMT 160 (239)
Q Consensus 82 ~~s~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~f~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~ 160 (239)
+.++.|.++.+.++.+++.+..++..+ ..|.+|+++++++. ++|+..+|.++|+++.++|+..+.|+++|...+....
T Consensus 80 ~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m~~~~~~~~ 158 (332)
T 3i53_A 80 EFGEQLRDDHAAGKRKWLDMNSAVGRGDLGFVELAHSIRTGQ-PAYPVRYGTSFWEDLGSDPVLSASFDTLMSHHLELDY 158 (332)
T ss_dssp TTGGGGSTTCTTCCHHHHCTTSHHHHHGGGGGGHHHHHHHSS-CSHHHHHSSCHHHHHHHCHHHHHHHHHHHHHHHHHHH
T ss_pred HhHHHHhcCCchhHHHHHHHcCCHhHHHHHHHHhHHHHhcCC-CHHHHhhCCCHHHHHHhCHHHHHHHHHHHHHhHHhhH
Confidence 999988877777888888775433345 78999999999988 6799999989999999999999999999998877666
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCCeEEEEccCCCCCC-C
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMFRFIP-P 232 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~ri~~~~gD~f~~~p-~ 232 (239)
+.++ +.++ +++..+|||||||+|.++..+++++|+++++++|+|++++.+++ .+||+++.+|+++++| .
T Consensus 159 ~~~~-~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~p~~ 235 (332)
T 3i53_A 159 TGIA-AKYD--WAALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDLQGPASAAHRRFLDTGLSGRAQVVVGSFFDPLPAG 235 (332)
T ss_dssp TTGG-GSSC--CGGGSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCS
T ss_pred HHHH-HhCC--CCCCCEEEEeCCChhHHHHHHHHHCCCCeEEEecCHHHHHHHHHhhhhcCcCcCeEEecCCCCCCCCCC
Confidence 6777 7777 66778999999999999999999999999999999999988763 4789999999999999 4
Q ss_pred ceEEEeC
Q 046950 233 ADAFLFK 239 (239)
Q Consensus 233 ~D~~~l~ 239 (239)
+|+|+++
T Consensus 236 ~D~v~~~ 242 (332)
T 3i53_A 236 AGGYVLS 242 (332)
T ss_dssp CSEEEEE
T ss_pred CcEEEEe
Confidence 9999874
No 9
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=100.00 E-value=1.6e-33 Score=246.67 Aligned_cols=233 Identities=29% Similarity=0.473 Sum_probs=182.4
Q ss_pred CCCCChhhhchHHHHHH--HHHHhHHHHHHHHHHHHhChhhHhhhCCCC---CCHHH--------------------HHH
Q 046950 4 NQDQGAKELFQGQAQLY--KLMFNHLSSMSLKCAIELGIADIIHSHGRA---ITLSE--------------------LMR 58 (239)
Q Consensus 4 ~~~~~~~~~~~~~~~l~--~~~~g~~~~~~L~~a~~lglfd~L~~~~~~---~t~~e--------------------lLr 58 (239)
|+-...++++++...++ +++.+++.+.+|++|+++|||+.|++.++| .|++| +||
T Consensus 11 ~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~a~~lgif~~L~~~g~pg~~~t~~eLA~~~~~~~~~~~~~~~l~rlLr 90 (372)
T 1fp1_D 11 NQISATSEQTEDSACLSAMVLTTNLVYPAVLNAAIDLNLFEIIAKATPPGAFMSPSEIASKLPASTQHSDLPNRLDRMLR 90 (372)
T ss_dssp --------CCHHHHHHHHHHHHHTTHHHHHHHHHHHTTHHHHHHTCSSTTCCBCHHHHHTTSCGGGCCTTHHHHHHHHHH
T ss_pred cccCchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHCChHHHHHhcCCCCCCcCHHHHHHhcCCCCCCCcChHHHHHHHH
Confidence 34445566788888999 999999999999999999999999874225 66543 789
Q ss_pred HHHhCCceeeec---cCCC--ccccccCccccccccCcC-CcccchhhcccCccccchhhhhHHhhcCCCCChhHHhhCC
Q 046950 59 LLVHSGCFKKTK---VNGE--EEAYGLTAASTLLIKDKP-YCLSPTVSVFVDPFFVAPFQSLSSWFKGTEITLWETVHGI 132 (239)
Q Consensus 59 ~L~~~g~l~~~~---~~~~--~~~y~~t~~s~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~f~~~~g~ 132 (239)
+|++.|+|++.. . ++ ++.|++|+.++.|+++++ .++++++.+..++.++..|.+|++++++++.+||+.++|.
T Consensus 91 ~L~~~gll~~~~~~~~-~g~~~~~y~~t~~s~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~l~~g~~~~~~~~~g~ 169 (372)
T 1fp1_D 91 LLASYSVLTSTTRTIE-DGGAERVYGLSMVGKYLVPDESRGYLASFTTFLCYPALLQVWMNFKEAVVDEDIDLFKNVHGV 169 (372)
T ss_dssp HHHHTTSEEEEEEECT-TSCEEEEEEECTTGGGGSTTCTTCCCTHHHHHHTCHHHHHHHTTHHHHHHSCC----------
T ss_pred HHhhCCceEecccccC-CCCcCCeEecCHHHHHHhCCCCCCCHHHHHHHhcCchHHHHHHHHHHHHHcCCCChhHHHhCC
Confidence 999999999871 1 01 258999999999988776 6899988876555667899999999999833789988999
Q ss_pred ChhhhcccCchHHHHHHHHHhhchhhhHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhc
Q 046950 133 KFWEFMNQNPAINQRFNEAMASDSEIMTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVAN 212 (239)
Q Consensus 133 ~~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~ 212 (239)
++|+|+.++|+..+.|+++|...+....+.++ +.++ .+++..+|||||||+|.++..+++++|+++++++|+|.+++.
T Consensus 170 ~~~~~~~~~~~~~~~f~~~m~~~~~~~~~~l~-~~~~-~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~ 247 (372)
T 1fp1_D 170 TKYEFMGKDKKMNQIFNKSMVDVCATEMKRML-EIYT-GFEGISTLVDVGGGSGRNLELIISKYPLIKGINFDLPQVIEN 247 (372)
T ss_dssp ----CCSSCHHHHHHHHHHHHHHHHHHHHHHH-HHCC-TTTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHTT
T ss_pred CHHHHHHhCHHHHHHHHHHHHhhhHHHHHHHH-HHhh-ccCCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeChHHHHHh
Confidence 99999999999999999999988877777788 7775 366778999999999999999999999999999999999999
Q ss_pred CCCCCCeEEEEccCCCCCCCceEEEeC
Q 046950 213 LPEADNLKYIAGDMFRFIPPADAFLFK 239 (239)
Q Consensus 213 a~~~~ri~~~~gD~f~~~p~~D~~~l~ 239 (239)
+++.++|+++.+|+++++|.+|+|+++
T Consensus 248 a~~~~~v~~~~~d~~~~~~~~D~v~~~ 274 (372)
T 1fp1_D 248 APPLSGIEHVGGDMFASVPQGDAMILK 274 (372)
T ss_dssp CCCCTTEEEEECCTTTCCCCEEEEEEE
T ss_pred hhhcCCCEEEeCCcccCCCCCCEEEEe
Confidence 987778999999999988889999873
No 10
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=100.00 E-value=2.2e-33 Score=242.12 Aligned_cols=212 Identities=26% Similarity=0.414 Sum_probs=188.9
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccc
Q 046950 14 QGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYG 79 (239)
Q Consensus 14 ~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~ 79 (239)
.+...+++++.+++.+.+|++++++|||+.|.+ +|.|++| +||+|++.|+|++.. ++.|+
T Consensus 7 ~~~~~l~~~~~~~~~~~~l~~~~~lgi~~~l~~--~~~t~~ela~~~~~~~~~l~r~Lr~L~~~g~l~~~~----~~~y~ 80 (334)
T 2ip2_A 7 AAARNLIQVVTGEWKSRCVYVATRLGLADLIES--GIDSDETLAAAVGSDAERIHRLMRLLVAFEIFQGDT----RDGYA 80 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHT--TCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET----TTEEE
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHcCcHHHHhC--CCCCHHHHHHHhCcCHHHHHHHHHHHHhCCceEecC----CCeEe
Confidence 577899999999999999999999999999976 7999988 899999999999985 58999
Q ss_pred cCccccccccCcCCcccchhhcccCccccchhhhhHHhhcCCCCChhHHhhCCChhhhcccCchHHHHHHHHHhhchhhh
Q 046950 80 LTAASTLLIKDKPYCLSPTVSVFVDPFFVAPFQSLSSWFKGTEITLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIM 159 (239)
Q Consensus 80 ~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~f~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~ 159 (239)
+|+.++.|. +++.++++++.+..++.. ..|.+|+++++++. ++|+..+|.++|+++.++|+..+.|+++| ..+...
T Consensus 81 ~t~~s~~l~-~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~m-~~~~~~ 156 (334)
T 2ip2_A 81 NTPTSHLLR-DVEGSFRDMVLFYGEEFH-AAWTPACEALLSGT-PGFELAFGEDFYSYLKRCPDAGRRFLLAM-KASNLA 156 (334)
T ss_dssp ECHHHHTTS-SSTTCSHHHHHHHTTHHH-HHTTTHHHHHHHCC-CHHHHHHSSCHHHHHHHCHHHHHHHHHHH-GGGHHH
T ss_pred cCHHHHHHh-CCCccHHHHHHHhcCchh-hHHHHHHHHHhcCC-ChhhhhcCCCHHHHHhhChHHHHHHHHHH-HHHHHH
Confidence 999999888 777788888877655434 88999999999988 78998999999999999999999999999 887777
Q ss_pred HHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCCeEEEEccCCCCCCC
Q 046950 160 TTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMFRFIPP 232 (239)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~ri~~~~gD~f~~~p~ 232 (239)
.+.++ +.++ +++ .+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+||+++.+|+++++|.
T Consensus 157 ~~~~~-~~~~--~~~-~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 232 (334)
T 2ip2_A 157 FHEIP-RLLD--FRG-RSFVDVGGGSGELTKAILQAEPSARGVMLDREGSLGVARDNLSSLLAGERVSLVGGDMLQEVPS 232 (334)
T ss_dssp HHHHH-HHSC--CTT-CEEEEETCTTCHHHHHHHHHCTTCEEEEEECTTCTHHHHHHTHHHHHTTSEEEEESCTTTCCCS
T ss_pred HHHHH-HhCC--CCC-CEEEEeCCCchHHHHHHHHHCCCCEEEEeCcHHHHHHHHHHHhhcCCCCcEEEecCCCCCCCCC
Confidence 77888 8877 666 8999999999999999999999999999999888877653 47899999999998887
Q ss_pred -ceEEEeC
Q 046950 233 -ADAFLFK 239 (239)
Q Consensus 233 -~D~~~l~ 239 (239)
+|+|+++
T Consensus 233 ~~D~v~~~ 240 (334)
T 2ip2_A 233 NGDIYLLS 240 (334)
T ss_dssp SCSEEEEE
T ss_pred CCCEEEEc
Confidence 9999873
No 11
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.98 E-value=2.9e-32 Score=238.01 Aligned_cols=219 Identities=17% Similarity=0.221 Sum_probs=180.3
Q ss_pred CCChhhhchHHHHHHHHHHhHHHHHHHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeecc
Q 046950 6 DQGAKELFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKV 71 (239)
Q Consensus 6 ~~~~~~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~ 71 (239)
++.+++++++..++++++.|++.+++|++++++|||++|+++++|.|++| +||+|++.|+|+++
T Consensus 6 ~~~~~~~~~a~~~l~~l~~g~~~~~~l~~a~~lgifd~L~~~~~~~t~~eLA~~~g~~~~~l~rlLr~l~~~g~l~~~-- 83 (363)
T 3dp7_A 6 TKEQCTAAEAQRLAQEIAFGPVVFQVSRLMLKFGIFQLLSGKREGYTLQEISGRTGLTRYAAQVLLEASLTIGTILLE-- 83 (363)
T ss_dssp CCSCCCSTTHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHTCTTCBCHHHHHHHHTCCHHHHHHHHHHHHHHTSEEEE--
T ss_pred ccCchhHHHHHHHHHHHHhhHHHHHHHHHHHHhCHHHHHHhcCCCCCHHHHHHHhCcCHHHHHHHHHHHhhCCCeEec--
Confidence 34556788999999999999999999999999999999988557999988 89999999999886
Q ss_pred CCCccccccCccccccccCcCCcccchhhcccCccccchhhhhHHhhcCCCCChhHHhhC--CChhhhcccCchHHHH--
Q 046950 72 NGEEEAYGLTAASTLLIKDKPYCLSPTVSVFVDPFFVAPFQSLSSWFKGTEITLWETVHG--IKFWEFMNQNPAINQR-- 147 (239)
Q Consensus 72 ~~~~~~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~f~~~~g--~~~~e~~~~~~~~~~~-- 147 (239)
+++|++|+.|+.|+++++.+. ++.+. .+.+++.|.+|++++++++ +++...+| .++|+++.++|+..+.
T Consensus 84 ---~~~y~~t~~s~~L~~~~~~~~--~~~~~-~~~~~~~~~~L~~~lr~g~-~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 156 (363)
T 3dp7_A 84 ---EDRYVLAKAGWFLLNDKMARV--NMEFN-HDVNYQGLFHLEEALLNGR-PEGLKVFGEWPTIYEGLSQLPEQVQKSW 156 (363)
T ss_dssp ---TTEEEECHHHHHHHHCHHHHH--HHHHH-HHTTHHHHTTHHHHHHHSS-CGGGGGTCCCSSHHHHGGGSCHHHHHHH
T ss_pred ---CCEEecccchHHhhCCCcccc--hheee-cHHhhhhHHHHHHHHhcCC-CccccccCchHhHHHHHhhCHHHHHHHH
Confidence 589999999998887654332 23332 3467889999999999988 56777788 6899999999987763
Q ss_pred --HHHHHhhchhhhHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCC
Q 046950 148 --FNEAMASDSEIMTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADN 218 (239)
Q Consensus 148 --f~~~m~~~~~~~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~r 218 (239)
|+++|.... ...++ ..+. ..+..+|||||||+|.++..+++++|+++++++|+|++++.+++ .+|
T Consensus 157 ~~f~~~~~~~~---~~~~l-~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~ 230 (363)
T 3dp7_A 157 FGFDHFYSDQS---FGKAL-EIVF--SHHPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDLPQQLEMMRKQTAGLSGSER 230 (363)
T ss_dssp HHHHHHTTCCC---CHHHH-HHHG--GGCCSEEEEESCTTCHHHHHHHHHSTTCEEEEEECHHHHHHHHHHHTTCTTGGG
T ss_pred HHHHHHhhhhh---HHHHH-HHhc--ccCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeCHHHHHHHHHHHHhcCcccc
Confidence 666664433 23455 5544 35678999999999999999999999999999999999887763 368
Q ss_pred eEEEEccCCCC---CCC-ceEEEeC
Q 046950 219 LKYIAGDMFRF---IPP-ADAFLFK 239 (239)
Q Consensus 219 i~~~~gD~f~~---~p~-~D~~~l~ 239 (239)
|+++.+|++++ +|. +|+|+++
T Consensus 231 v~~~~~d~~~~~~~~p~~~D~v~~~ 255 (363)
T 3dp7_A 231 IHGHGANLLDRDVPFPTGFDAVWMS 255 (363)
T ss_dssp EEEEECCCCSSSCCCCCCCSEEEEE
T ss_pred eEEEEccccccCCCCCCCcCEEEEe
Confidence 99999999995 674 9999873
No 12
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.97 E-value=1.8e-31 Score=233.43 Aligned_cols=216 Identities=23% Similarity=0.335 Sum_probs=189.0
Q ss_pred chHHHHHHHHHHhHHHHHHHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCcc--
Q 046950 13 FQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEE-- 76 (239)
Q Consensus 13 ~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~-- 76 (239)
.+...++++++.+++.+.+|++++++|||+.|.. +|.|++| +||+|++.|+|++.. ++
T Consensus 14 ~~~~~~l~~~~~~~~~~~~l~~~~~l~i~~~l~~--~~~t~~eLA~~~g~~~~~l~r~Lr~L~~~Gll~~~~----~~~~ 87 (374)
T 1qzz_A 14 DQDLDVLLKNLGNLVTPMALRVAATLRLVDHLLA--GADTLAGLADRTDTHPQALSRLVRHLTVVGVLEGGE----KQGR 87 (374)
T ss_dssp HHHHHHHHHTTTCCHHHHHHHHHHHTTHHHHHHT--TCCSHHHHHHHHTCCHHHHHHHHHHHHHTTSEECCC----C-CC
T ss_pred chHHHHHHHHHHhhHHHHHHHHHHHcChHHHHhC--CCCCHHHHHHHhCcCHHHHHHHHHHHhhCCCEEEeC----CCCe
Confidence 4466789999999999999999999999999965 7999988 899999999999864 56
Q ss_pred ccccCccccccccCcCCcccchhhcccCcccc-chhhhhHHhhcCCCCChhHHhhCCChhhhcccCchHHHHHHHHHhhc
Q 046950 77 AYGLTAASTLLIKDKPYCLSPTVSVFVDPFFV-APFQSLSSWFKGTEITLWETVHGIKFWEFMNQNPAINQRFNEAMASD 155 (239)
Q Consensus 77 ~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~l~~~l~~~~~~~f~~~~g~~~~e~~~~~~~~~~~f~~~m~~~ 155 (239)
.|.+|+.++.|.++.+.++++++.+..++..+ ..|.+|.+.++++. ++|+..+|.++|+++..+|+..+.|+++|...
T Consensus 88 ~y~~t~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~~~~g~~~~~~~~~~~~~~~~f~~~~~~~ 166 (374)
T 1qzz_A 88 PLRPTRLGMLLADGHPAQQRAWLDLNGAVSHADLAFTGLLDVVRTGR-PAYAGRYGRPFWEDLSADVALADSFDALMSCD 166 (374)
T ss_dssp CCEECTTGGGGSTTCTTCHHHHHCTTSHHHHHHGGGGGHHHHHHHSC-CSHHHHHSSCHHHHHHHCHHHHHHHHHTCGGG
T ss_pred EEEEChHHHhhcCCCcccHHHHHHHcCChhhHHHHHHHHHHHHhcCC-ChhhhhhCCCHHHHHhhChHHHHHHHHHHHHh
Confidence 99999999999988777888888776433455 78999999999987 67988999999999999999999999999887
Q ss_pred hhhhHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCCeEEEEccCCC
Q 046950 156 SEIMTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMFR 228 (239)
Q Consensus 156 ~~~~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~ri~~~~gD~f~ 228 (239)
+....+.++ +.++ +.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+||+++.+|+++
T Consensus 167 ~~~~~~~~~-~~~~--~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 243 (374)
T 1qzz_A 167 EDLAYEAPA-DAYD--WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVELAGPAERARRRFADAGLADRVTVAEGDFFK 243 (374)
T ss_dssp STTTTHHHH-HTSC--CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHTTCTTTEEEEECCTTS
T ss_pred hHhHHHHHH-HhCC--CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeCHHHHHHHHHHHHhcCCCCceEEEeCCCCC
Confidence 776667788 8777 66778999999999999999999999999999999888887763 3589999999999
Q ss_pred CCCC-ceEEEe
Q 046950 229 FIPP-ADAFLF 238 (239)
Q Consensus 229 ~~p~-~D~~~l 238 (239)
++|. +|+|++
T Consensus 244 ~~~~~~D~v~~ 254 (374)
T 1qzz_A 244 PLPVTADVVLL 254 (374)
T ss_dssp CCSCCEEEEEE
T ss_pred cCCCCCCEEEE
Confidence 8887 999986
No 13
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.97 E-value=7.8e-31 Score=228.31 Aligned_cols=213 Identities=23% Similarity=0.365 Sum_probs=188.1
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccC
Q 046950 16 QAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLT 81 (239)
Q Consensus 16 ~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t 81 (239)
..++++++.+++.+.+|.+++++|||+.|.. +|.|++| +||+|++.|+|++.. +++|.+|
T Consensus 20 ~~~~~~~~~~~~~~~~l~~~~~l~i~~~l~~--~~~t~~ela~~~~~~~~~l~r~L~~L~~~g~~~~~~----~g~y~~t 93 (360)
T 1tw3_A 20 ALRTLIRLGSLHTPMVVRTAATLRLVDHILA--GARTVKALAARTDTRPEALLRLIRHLVAIGLLEEDA----PGEFVPT 93 (360)
T ss_dssp HHHHHHHHHCSHHHHHHHHHHHTTHHHHHHT--TCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEE----TTEEEEC
T ss_pred hHHHHHHHHhHHHHHHHHHHHHhCHHHHHhC--CCCCHHHHHHHhCcCHHHHHHHHHHHHHCCCEEecC----CCeEEeC
Confidence 5778999999999999999999999999965 7899988 899999999999965 6899999
Q ss_pred ccccccccCcCCcccchhhcccCcc-ccchhhhhHHhhcCCCCChhHHhhCCChhhhcccCchHHHHHHHHHhhchhhhH
Q 046950 82 AASTLLIKDKPYCLSPTVSVFVDPF-FVAPFQSLSSWFKGTEITLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMT 160 (239)
Q Consensus 82 ~~s~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~~l~~~~~~~f~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~ 160 (239)
+.++.|.++.+.++++++.+..++. .+..|.+|.+.++++. ++|+..+|.++|+++..+|+....|..+|...+....
T Consensus 94 ~~s~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~g~-~~~~~~~g~~~~~~~~~~p~~~~~f~~~~~~~~~~~~ 172 (360)
T 1tw3_A 94 EVGELLADDHPAAQRAWHDLTQAVARADISFTRLPDAIRTGR-PTYESIYGKPFYEDLAGRPDLRASFDSLLACDQDVAF 172 (360)
T ss_dssp TTGGGGSTTSTTCHHHHTCTTSHHHHHGGGGGGHHHHHHHCC-CCHHHHHSSCHHHHHHTCHHHHHHHHHHHTTTTTTTT
T ss_pred HHHHHHhcCCchhHHHHHHHhcCchhHHHHHHHHHHHHHcCC-CHHHHhcCCCHHHHHHhChHHHHHHHHHHHHHHHHhH
Confidence 9999999888778888887764333 5788999999999887 6788889999999999999999999999998877767
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCCeEEEEccCCCCCCC-
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMFRFIPP- 232 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~ri~~~~gD~f~~~p~- 232 (239)
+.++ +.++ +.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+||+++.+|+++++|.
T Consensus 173 ~~l~-~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 249 (360)
T 1tw3_A 173 DAPA-AAYD--WTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEMAGTVDTARSYLKDEGLSDRVDVVEGDFFEPLPRK 249 (360)
T ss_dssp HHHH-HHSC--CTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEECTTHHHHHHHHHHHTTCTTTEEEEECCTTSCCSSC
T ss_pred HHHH-HhCC--CccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecCHHHHHHHHHHHHhcCCCCceEEEeCCCCCCCCCC
Confidence 7788 8877 66778999999999999999999999999999999888887653 35899999999998887
Q ss_pred ceEEEe
Q 046950 233 ADAFLF 238 (239)
Q Consensus 233 ~D~~~l 238 (239)
+|+|++
T Consensus 250 ~D~v~~ 255 (360)
T 1tw3_A 250 ADAIIL 255 (360)
T ss_dssp EEEEEE
T ss_pred ccEEEE
Confidence 999986
No 14
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.96 E-value=2.2e-29 Score=219.31 Aligned_cols=208 Identities=23% Similarity=0.380 Sum_probs=178.6
Q ss_pred hhhhchHHHHHHHHHH-hHHHHHHHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCC
Q 046950 9 AKELFQGQAQLYKLMF-NHLSSMSLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNG 73 (239)
Q Consensus 9 ~~~~~~~~~~l~~~~~-g~~~~~~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~ 73 (239)
.+++.++..++++++. +++.+.+|++|+++|||+.|++ +|.|++| +||+|++.|+|++.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~lgif~~L~~--~~~t~~eLA~~~g~~~~~l~rlLr~L~~~gll~~~---- 97 (359)
T 1x19_A 24 NNDLLNYYHRANELVFKGLIEFSCMKAAIELDLFSHMAE--GPKDLATLAADTGSVPPRLEMLLETLRQMRVINLE---- 97 (359)
T ss_dssp CCHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTHHHHHTT--CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE----
T ss_pred ccccCCcchHHHHHHHHHHHHHHHHHHHHHcCcHHHHcC--CCCCHHHHHHHhCcChHHHHHHHHHHHhCCCeEee----
Confidence 3456778889999986 8999999999999999999986 7999988 89999999999998
Q ss_pred CccccccCcc-ccccccCcC---CcccchhhcccCccccchhhhhHHhhcCCCCChhHHhhCCChhhhcccCch---HHH
Q 046950 74 EEEAYGLTAA-STLLIKDKP---YCLSPTVSVFVDPFFVAPFQSLSSWFKGTEITLWETVHGIKFWEFMNQNPA---INQ 146 (239)
Q Consensus 74 ~~~~y~~t~~-s~~l~~~~~---~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~f~~~~g~~~~e~~~~~~~---~~~ 146 (239)
++.|++|+. ++.|.++++ .++++++.+. .+.++..|.+|+++++++.+ |+++.++|+ ..+
T Consensus 98 -~~~y~~t~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~L~~~l~~g~~-----------~~~~~~~p~~~~~~~ 164 (359)
T 1x19_A 98 -DGKWSLTEFADYMFSPTPKEPNLHQTPVAKAM-AFLADDFYMGLSQAVRGQKN-----------FKGQVPYPPVTREDN 164 (359)
T ss_dssp -TTEEEECHHHHHHSSSSCSBTTBCCHHHHHHH-HHHHHHTGGGHHHHHTTSCC-----------CCCSSCSSCCSHHHH
T ss_pred -CCeEecCHHHHHHhcCCCCCccccHHHHHHHH-HHHHHHHHHHHHHHHhcCCC-----------CcccccCchhhHHHH
Confidence 479999996 457777777 6888887765 34567899999999998773 567788888 899
Q ss_pred HHHHHHhhchh-hhHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCC
Q 046950 147 RFNEAMASDSE-IMTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADN 218 (239)
Q Consensus 147 ~f~~~m~~~~~-~~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~r 218 (239)
.|+.+|...+. ...+.++ +.++ +.+..+|||||||+|.++..+++++|+++++++|+|.+++.+++ .+|
T Consensus 165 ~f~~~m~~~~~~~~~~~l~-~~~~--~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~ 241 (359)
T 1x19_A 165 LYFEEIHRSNAKFAIQLLL-EEAK--LDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNLPGAIDLVNENAAEKGVADR 241 (359)
T ss_dssp HHHHHHHHTTCHHHHHHHH-HHCC--CTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCTTT
T ss_pred HHHHHHHHhccchhHHHHH-HhcC--CCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCCC
Confidence 99999998887 7777888 8887 67788999999999999999999999999999999888887753 468
Q ss_pred eEEEEccCCC-CCCCceEEEe
Q 046950 219 LKYIAGDMFR-FIPPADAFLF 238 (239)
Q Consensus 219 i~~~~gD~f~-~~p~~D~~~l 238 (239)
|+++.+|+++ +.|.+|+|++
T Consensus 242 v~~~~~d~~~~~~~~~D~v~~ 262 (359)
T 1x19_A 242 MRGIAVDIYKESYPEADAVLF 262 (359)
T ss_dssp EEEEECCTTTSCCCCCSEEEE
T ss_pred EEEEeCccccCCCCCCCEEEE
Confidence 9999999998 4555899986
No 15
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.96 E-value=4e-29 Score=216.88 Aligned_cols=208 Identities=20% Similarity=0.250 Sum_probs=171.5
Q ss_pred hhchHHHHHHHHHHhHHHHHHHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCcc
Q 046950 11 ELFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEE 76 (239)
Q Consensus 11 ~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~ 76 (239)
.+..+.. +++++.+++.+.+|++|+++|||++|.+ |.|++| +||+|++.|+|++. ++
T Consensus 21 ~l~~p~~-l~~~~~~~~~~~~l~~a~~lgif~~l~~---~~t~~elA~~~~~~~~~l~rlLr~L~~~gll~~~-----~~ 91 (352)
T 3mcz_A 21 ALTSVVD-LVKLSDQYRQSAILHYAVADKLFDLTQT---GRTPAEVAASFGMVEGKAAILLHALAALGLLTKE-----GD 91 (352)
T ss_dssp CCCSHHH-HHHHHHTHHHHHHHHHHHHTTHHHHTTS---CBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE-----TT
T ss_pred CCCCHHH-HHHHHHHHHHHHHHHHHHHCChHHHhCC---CCCHHHHHHHhCcChHHHHHHHHHHHHCCCeEec-----CC
Confidence 3454544 9999999999999999999999999953 889888 89999999999998 47
Q ss_pred ccccCcccc-ccccCcCCcccchhhcccCccccchhhhhHHhhcCCCCChhHHhhCCChhhhcccCchHHHHHHHHHhhc
Q 046950 77 AYGLTAAST-LLIKDKPYCLSPTVSVFVDPFFVAPFQSLSSWFKGTEITLWETVHGIKFWEFMNQNPAINQRFNEAMASD 155 (239)
Q Consensus 77 ~y~~t~~s~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~f~~~~g~~~~e~~~~~~~~~~~f~~~m~~~ 155 (239)
+|.+|+.++ ++.++.+.+++.++.+. ..++..|.+|+++++++.+.+|+.. .++..+|+..+.|+++|...
T Consensus 92 ~y~~t~~s~~~l~~~~~~~~~~~~~~~--~~~~~~~~~l~~~l~~g~~~~f~~~------~~~~~~~~~~~~f~~~m~~~ 163 (352)
T 3mcz_A 92 AFRNTALTERYLTTTSADYIGPIVEHQ--YLQWDNWPRLGEILRSEKPLAFQQE------SRFAHDTRARDAFNDAMVRL 163 (352)
T ss_dssp EEEECHHHHHHHSTTCTTCCHHHHHHH--HTTTTTGGGHHHHHTCSSCCTTSHH------HHTTTCHHHHHHHHHHHHHH
T ss_pred eeecCHHHHhhccCCChhhHHHHHHHh--HHHHHHHHHHHHHHhCCCCCCcccc------cccccCHHHHHHHHHHHHhh
Confidence 899999998 56677777888877654 3467899999999999986655432 12356888999999999873
Q ss_pred hhhhHHHHHHHhhhhhhcC-CCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCCeEEEEccCC
Q 046950 156 SEIMTTFVVKSECKQIFEG-LGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMF 227 (239)
Q Consensus 156 ~~~~~~~~l~~~~~~~~~~-~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~ri~~~~gD~f 227 (239)
... ...++ +.++ +.+ ..+|||||||+|.++..+++++|+++++++|+|++++.+++ .+||+++.+|++
T Consensus 164 ~~~-~~~~l-~~~~--~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 239 (352)
T 3mcz_A 164 SQP-MVDVV-SELG--VFARARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDLPTTRDAARKTIHAHDLGGRVEFFEKNLL 239 (352)
T ss_dssp HHH-HHHHH-HTCG--GGTTCCEEEEETCTTCHHHHHHHHHCTTCEEEEEECGGGHHHHHHHHHHTTCGGGEEEEECCTT
T ss_pred hhh-HHHHH-HhCC--CcCCCCEEEEeCCCcCHHHHHHHHhCCCCeEEEEECHHHHHHHHHHHHhcCCCCceEEEeCCcc
Confidence 332 23677 8887 555 88999999999999999999999999999999988877653 468999999999
Q ss_pred CC---CCC-ceEEEeC
Q 046950 228 RF---IPP-ADAFLFK 239 (239)
Q Consensus 228 ~~---~p~-~D~~~l~ 239 (239)
++ .|. +|+|+++
T Consensus 240 ~~~~~~~~~~D~v~~~ 255 (352)
T 3mcz_A 240 DARNFEGGAADVVMLN 255 (352)
T ss_dssp CGGGGTTCCEEEEEEE
T ss_pred cCcccCCCCccEEEEe
Confidence 95 555 9999873
No 16
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.96 E-value=5.1e-29 Score=214.52 Aligned_cols=207 Identities=18% Similarity=0.231 Sum_probs=178.5
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccCc
Q 046950 17 AQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLTA 82 (239)
Q Consensus 17 ~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t~ 82 (239)
.++++++.+++.+.+|++++++|||++|++ +|.|++| +||+|++.|+|++. +++|++|+
T Consensus 8 ~~l~~~~~~~~~~~~l~~~~~l~i~~~l~~--~~~t~~ela~~~~~~~~~l~r~L~~L~~~g~l~~~-----~~~y~~t~ 80 (335)
T 2r3s_A 8 ALFFNTVNAYQRSAAIKAAVELNVFTAISQ--GIESSQSLAQKCQTSERGMRMLCDYLVIIGFMTKQ-----AEGYRLTS 80 (335)
T ss_dssp HHHHHHHTTHHHHHHHHHHHHTTHHHHHTT--SEECHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE-----TTEEEECH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcChHHHHhc--CCCCHHHHHHHhCCCchHHHHHHHHHHhcCCeEec-----CCEEecCH
Confidence 578999999999999999999999999986 6899888 89999999999985 58999999
Q ss_pred cc-cccccCcCCcccchhhcccCccccchhhhhHHhhcCCCCChhHHhhCCChhhhcccCchHHHHHHHHHhhchhhhHH
Q 046950 83 AS-TLLIKDKPYCLSPTVSVFVDPFFVAPFQSLSSWFKGTEITLWETVHGIKFWEFMNQNPAINQRFNEAMASDSEIMTT 161 (239)
Q Consensus 83 ~s-~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~f~~~~g~~~~e~~~~~~~~~~~f~~~m~~~~~~~~~ 161 (239)
.+ +.|.++++.++++++.+..++.++..|.+|+++++++. ++|+ + |+++.++++..+.|.+.|.........
T Consensus 81 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~-~~~~-----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (335)
T 2r3s_A 81 DSAMFLDRQSKFYVGDAIEFLLSPMITNGFNDLTAAVLKGG-TAIS-----S-EGTLSPEHPVWVQFAKAMSPMMANPAQ 153 (335)
T ss_dssp HHHHHTCTTSTTCCGGGHHHHTCHHHHGGGTTHHHHHHHTS-CCST-----T-TGGGSTTCTHHHHHHHHSGGGGHHHHH
T ss_pred HHHHHhccCCcHHHHHHHHHhcchhhHHHHHhHHHHHhcCC-CCCC-----C-cccccCCHHHHHHHHHHHHHHHhhhHH
Confidence 99 68888777788888887754456789999999999887 4554 3 888888999999999999888776667
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCCeEEEEccCCC-CCCC-
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMFR-FIPP- 232 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~ri~~~~gD~f~-~~p~- 232 (239)
.++ +.+++.+.+..+|||||||+|.++..+++++|+.+++++|++.+++.+++ .+||+++.+|+++ ++|.
T Consensus 154 ~~~-~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 232 (335)
T 2r3s_A 154 LIA-QLVNENKIEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWASVLEVAKENARIQGVASRYHTIAGSAFEVDYGND 232 (335)
T ss_dssp HHH-HHHTC--CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECHHHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSC
T ss_pred HHH-HhcccccCCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecHHHHHHHHHHHHhcCCCcceEEEecccccCCCCCC
Confidence 788 88872126778999999999999999999999999999999988887763 4589999999998 5666
Q ss_pred ceEEEe
Q 046950 233 ADAFLF 238 (239)
Q Consensus 233 ~D~~~l 238 (239)
+|+|++
T Consensus 233 ~D~v~~ 238 (335)
T 2r3s_A 233 YDLVLL 238 (335)
T ss_dssp EEEEEE
T ss_pred CcEEEE
Confidence 999987
No 17
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=98.86 E-value=1.2e-08 Score=88.92 Aligned_cols=64 Identities=14% Similarity=0.171 Sum_probs=54.7
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCCCC-----CceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRFIP-----PADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~~p-----~~D~~~l 238 (239)
...+||||| |+|.++..+++..|+.+++++|+ |.+++.+++ .+||+++.+|+++++| .+|+|++
T Consensus 172 ~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~ 247 (373)
T 2qm3_A 172 ENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTKFIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFIT 247 (373)
T ss_dssp TTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEE
T ss_pred CCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEE
Confidence 357999999 99999999999999899999999 788887763 2389999999988554 3899986
No 18
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.84 E-value=1.3e-08 Score=84.36 Aligned_cols=67 Identities=16% Similarity=0.221 Sum_probs=55.5
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHC--CCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCC-CCCCceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAF--PGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFR-FIPPADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~--P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~-~~p~~D~~~l 238 (239)
.++..+|||||||+|.++..+++.+ |+++++++|+ |.+++.|++ ..+|+++.+|+.+ +.+.+|++++
T Consensus 68 ~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~~~d~v~~ 145 (261)
T 4gek_A 68 VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIENASMVVL 145 (261)
T ss_dssp CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCCSEEEEEE
T ss_pred CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccccccccee
Confidence 3567799999999999999999975 6889999999 667776652 5689999999976 5556998875
No 19
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.67 E-value=7.2e-08 Score=77.80 Aligned_cols=66 Identities=21% Similarity=0.359 Sum_probs=55.5
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----CCCeEEEEccCCC-CCCC-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMFR-FIPP-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----~~ri~~~~gD~f~-~~p~-~D~~~l 238 (239)
.+..+|||||||+|.++..+++.+|..+++++|+ |.+++.+++ ..+++++.+|+.+ +.+. +|+|++
T Consensus 43 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 115 (234)
T 3dtn_A 43 TENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNLKVKYIEADYSKYDFEEKYDMVVS 115 (234)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCTTEEEEESCTTTCCCCSCEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCCCEEEEeCchhccCCCCCceEEEE
Confidence 4568999999999999999999999999999999 667766542 3489999999987 4444 999986
No 20
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.66 E-value=2.5e-08 Score=79.97 Aligned_cols=64 Identities=22% Similarity=0.373 Sum_probs=53.3
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
....+|||||||+|.++..+++..| +++++|+ |.+++.++. ..+++++.+|+.+ +.+ . +|+|++
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 109 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYGF--EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIF 109 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEE
Confidence 3467999999999999999999988 8999999 677776653 3789999999987 555 3 999875
No 21
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=98.65 E-value=2.7e-08 Score=80.57 Aligned_cols=66 Identities=8% Similarity=0.020 Sum_probs=56.0
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCC---CceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIP---PADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p---~~D~~~l 238 (239)
++..+|+|||||+|..++.+++..|..+++..|. |..++.|+. .+||++..+|.++++| .+|+|+.
T Consensus 14 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~Ivi 90 (225)
T 3kr9_A 14 SQGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITI 90 (225)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEE
Confidence 4557999999999999999999999999999999 556666552 5689999999999876 3898874
No 22
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=98.62 E-value=6.1e-08 Score=81.27 Aligned_cols=64 Identities=17% Similarity=0.295 Sum_probs=54.8
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCCC-c---eEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIPP-A---DAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p~-~---D~~~l 238 (239)
...+|||||||+|.++..+++. |+.+++.+|+ |..++.++. .+|++++.+|++++.+. + |+|+.
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~-~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~~~f~~~D~Ivs 198 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKF-SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFKEKFASIEMILS 198 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHH-SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGGGGTTTCCEEEE
T ss_pred CCCEEEEEeCchhHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcccccCCCCEEEE
Confidence 4568999999999999999999 9999999999 667776652 45799999999987654 8 99975
No 23
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.61 E-value=4.8e-08 Score=82.06 Aligned_cols=42 Identities=14% Similarity=0.162 Sum_probs=36.5
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCC
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLP 214 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~ 214 (239)
...++|||||||+|.++..+++.+|..+++++|+ +.+++.|+
T Consensus 45 ~~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~ 87 (292)
T 3g07_A 45 FRGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSAR 87 (292)
T ss_dssp TTTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHH
T ss_pred cCCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHH
Confidence 3568999999999999999999999999999999 55666543
No 24
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=98.61 E-value=1.3e-07 Score=74.84 Aligned_cols=74 Identities=16% Similarity=0.226 Sum_probs=59.9
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCCCC---
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRFIP--- 231 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~~p--- 231 (239)
.++ ..++ .....+|||||||+|.++..+++..|..+++++|. |..++.+++ .++++++.+|+.+..+
T Consensus 31 ~~l-~~l~--~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~ 107 (204)
T 3e05_A 31 VTL-SKLR--LQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDDLP 107 (204)
T ss_dssp HHH-HHTT--CCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTTSC
T ss_pred HHH-HHcC--CCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhcCC
Confidence 344 5544 45678999999999999999999999999999999 667776653 3689999999987543
Q ss_pred CceEEEe
Q 046950 232 PADAFLF 238 (239)
Q Consensus 232 ~~D~~~l 238 (239)
.+|++++
T Consensus 108 ~~D~i~~ 114 (204)
T 3e05_A 108 DPDRVFI 114 (204)
T ss_dssp CCSEEEE
T ss_pred CCCEEEE
Confidence 4999885
No 25
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.56 E-value=1e-07 Score=75.71 Aligned_cols=62 Identities=24% Similarity=0.435 Sum_probs=52.7
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
.+|||||||+|.++..+++. |..+++++|+ |..++.++. .++++++.+|+.+ +++ . +|+|++
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~-~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 117 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQ-SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVS 117 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHH-SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred CEEEEECCCCCHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEE
Confidence 39999999999999999999 8999999999 667766653 4589999999987 555 3 999986
No 26
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.56 E-value=2.1e-07 Score=77.53 Aligned_cols=65 Identities=17% Similarity=0.321 Sum_probs=54.8
Q ss_pred CCCcEEEecCcc---hHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----CCCeEEEEccCCCC------------CC--
Q 046950 174 GLGSLVDVGGGN---GTFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMFRF------------IP-- 231 (239)
Q Consensus 174 ~~~~vvDVGGG~---G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----~~ri~~~~gD~f~~------------~p-- 231 (239)
+..+|||||||. |.++..+.+.+|+.+++.+|+ |.+++.+++ .++++++.+|++++ ++
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~d~~ 156 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDPNTAVFTADVRDPEYILNHPDVRRMIDFS 156 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCTTEEEEECCTTCHHHHHHSHHHHHHCCTT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCCCeEEEEeeCCCchhhhccchhhccCCCC
Confidence 568999999999 999888889999999999999 888887763 47899999999862 22
Q ss_pred CceEEEe
Q 046950 232 PADAFLF 238 (239)
Q Consensus 232 ~~D~~~l 238 (239)
.+|++++
T Consensus 157 ~~d~v~~ 163 (274)
T 2qe6_A 157 RPAAIML 163 (274)
T ss_dssp SCCEEEE
T ss_pred CCEEEEE
Confidence 4788875
No 27
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.56 E-value=2.5e-07 Score=76.19 Aligned_cols=73 Identities=12% Similarity=0.238 Sum_probs=58.8
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCC-CCC-C-ceEE
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFR-FIP-P-ADAF 236 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~-~~p-~-~D~~ 236 (239)
..++ +.++ .....+|||||||+|.++..+++ |..+++++|+ |..++.++...+++++.+|+.+ +.| . +|+|
T Consensus 24 ~~l~-~~~~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~~fD~v 98 (261)
T 3ege_A 24 NAII-NLLN--LPKGSVIADIGAGTGGYSVALAN--QGLFVYAVEPSIVMRQQAVVHPQVEWFTGYAENLALPDKSVDGV 98 (261)
T ss_dssp HHHH-HHHC--CCTTCEEEEETCTTSHHHHHHHT--TTCEEEEECSCHHHHHSSCCCTTEEEECCCTTSCCSCTTCBSEE
T ss_pred HHHH-HHhC--CCCCCEEEEEcCcccHHHHHHHh--CCCEEEEEeCCHHHHHHHHhccCCEEEECchhhCCCCCCCEeEE
Confidence 3444 4444 45678999999999999999997 7889999999 6688887766699999999976 454 3 9999
Q ss_pred Ee
Q 046950 237 LF 238 (239)
Q Consensus 237 ~l 238 (239)
+.
T Consensus 99 ~~ 100 (261)
T 3ege_A 99 IS 100 (261)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 28
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=98.56 E-value=7e-08 Score=78.32 Aligned_cols=66 Identities=8% Similarity=0.001 Sum_probs=55.7
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCC---CceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIP---PADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p---~~D~~~l 238 (239)
++..+|+|||||+|..++.+++..|..+++..|. |..++.|++ .+||++..+|.++.++ .+|+|++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~Ivi 96 (230)
T 3lec_A 20 PKGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITI 96 (230)
T ss_dssp CTTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEE
Confidence 4567999999999999999999999999999999 556666552 6789999999999765 3898874
No 29
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=98.54 E-value=8.1e-08 Score=78.62 Aligned_cols=66 Identities=8% Similarity=0.132 Sum_probs=55.6
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCC--C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIP--P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p--~-~D~~~l 238 (239)
++..+|+|||||+|.+++.+++..|..+++..|. |..++.|++ .+||++..+|.++.++ . +|+|++
T Consensus 20 ~~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Ivi 96 (244)
T 3gnl_A 20 TKNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVI 96 (244)
T ss_dssp CSSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEE
T ss_pred CCCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEE
Confidence 4567999999999999999999999999999999 556666552 5789999999999765 2 898874
No 30
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=98.54 E-value=1.6e-07 Score=76.89 Aligned_cols=74 Identities=15% Similarity=0.222 Sum_probs=60.7
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHH-CCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCCC
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEA-FPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIPP 232 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p~ 232 (239)
.++ ...+ .....+|||+|||+|.++..+++. .|..+++.+|+ |..++.+++ .+|++++.+|+.+.++.
T Consensus 84 ~i~-~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 160 (255)
T 3mb5_A 84 LIV-AYAG--ISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEE 160 (255)
T ss_dssp HHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCC
T ss_pred HHH-HhhC--CCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCC
Confidence 344 4444 456789999999999999999999 89999999999 667776653 46799999999987764
Q ss_pred --ceEEEe
Q 046950 233 --ADAFLF 238 (239)
Q Consensus 233 --~D~~~l 238 (239)
+|++++
T Consensus 161 ~~~D~v~~ 168 (255)
T 3mb5_A 161 ENVDHVIL 168 (255)
T ss_dssp CSEEEEEE
T ss_pred CCcCEEEE
Confidence 999986
No 31
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.52 E-value=3.2e-07 Score=75.80 Aligned_cols=64 Identities=20% Similarity=0.302 Sum_probs=54.4
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCC-CCCC--ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFR-FIPP--ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~-~~p~--~D~~~l 238 (239)
....+|||||||+|.++..|++.+. +++++|. +.+++.++...+|+++.+|+-+ ++|. +|+|+.
T Consensus 38 ~~~~~vLDvGcGtG~~~~~l~~~~~--~v~gvD~s~~ml~~a~~~~~v~~~~~~~e~~~~~~~sfD~v~~ 105 (257)
T 4hg2_A 38 PARGDALDCGCGSGQASLGLAEFFE--RVHAVDPGEAQIRQALRHPRVTYAVAPAEDTGLPPASVDVAIA 105 (257)
T ss_dssp SCSSEEEEESCTTTTTHHHHHTTCS--EEEEEESCHHHHHTCCCCTTEEEEECCTTCCCCCSSCEEEEEE
T ss_pred CCCCCEEEEcCCCCHHHHHHHHhCC--EEEEEeCcHHhhhhhhhcCCceeehhhhhhhcccCCcccEEEE
Confidence 3457899999999999999998864 7899999 6789999888899999999865 5663 999985
No 32
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=98.51 E-value=1.9e-07 Score=74.60 Aligned_cols=65 Identities=20% Similarity=0.265 Sum_probs=54.2
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC-C--CC-C-ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR-F--IP-P-ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~-~--~p-~-~D~~~l 238 (239)
...+|||||||+|.++..+++.+|+.+++++|+ |..++.++. .++++++.+|+.+ + ++ . +|+|++
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~ 117 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYL 117 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEE
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEE
Confidence 457899999999999999999999999999999 667776653 3689999999976 2 44 2 898875
No 33
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.51 E-value=5.6e-07 Score=71.44 Aligned_cols=73 Identities=23% Similarity=0.398 Sum_probs=57.0
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC--CCCeEEEEccCCCCCCC--ceEE
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE--ADNLKYIAGDMFRFIPP--ADAF 236 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~--~~ri~~~~gD~f~~~p~--~D~~ 236 (239)
.++ +.+. ......+|||||||+|.++..+++. ..+++++|+ |..++.++. ..+++++.+|+.+..+. +|+|
T Consensus 36 ~~~-~~l~-~~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~~D~v 111 (218)
T 3ou2_A 36 AAL-ERLR-AGNIRGDVLELASGTGYWTRHLSGL--ADRVTALDGSAEMIAEAGRHGLDNVEFRQQDLFDWTPDRQWDAV 111 (218)
T ss_dssp HHH-HHHT-TTTSCSEEEEESCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHGGGCCTTEEEEECCTTSCCCSSCEEEE
T ss_pred HHH-HHHh-cCCCCCeEEEECCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHhcCCCCeEEEecccccCCCCCceeEE
Confidence 344 4443 2445679999999999999999998 669999999 667777654 36899999999886443 9999
Q ss_pred Ee
Q 046950 237 LF 238 (239)
Q Consensus 237 ~l 238 (239)
++
T Consensus 112 ~~ 113 (218)
T 3ou2_A 112 FF 113 (218)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 34
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.51 E-value=3.4e-07 Score=75.26 Aligned_cols=65 Identities=23% Similarity=0.241 Sum_probs=53.4
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-CCCeEEEEccCCC-CCCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMFR-FIPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-~~ri~~~~gD~f~-~~p~-~D~~~l 238 (239)
.++..+|||||||+|.++..+++..+ +++++|+ |.+++.+++ ..+++++.+|+.+ +.+. +|+|++
T Consensus 48 ~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 116 (263)
T 3pfg_A 48 SPKAASLLDVACGTGMHLRHLADSFG--TVEGLELSADMLAIARRRNPDAVLHHGDMRDFSLGRRFSAVTC 116 (263)
T ss_dssp CTTCCEEEEETCTTSHHHHHHTTTSS--EEEEEESCHHHHHHHHHHCTTSEEEECCTTTCCCSCCEEEEEE
T ss_pred CCCCCcEEEeCCcCCHHHHHHHHcCC--eEEEEECCHHHHHHHHhhCCCCEEEECChHHCCccCCcCEEEE
Confidence 34568999999999999999999854 7999999 777777654 4589999999987 4454 999986
No 35
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.50 E-value=3.2e-07 Score=74.94 Aligned_cols=74 Identities=16% Similarity=0.252 Sum_probs=57.4
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC-CC
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF-IP 231 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~-~p 231 (239)
..++ +.+. ..+..+|||||||+|.++..+++.+ ..+++++|+ |..++.+++ .++|+++.+|+.+. .+
T Consensus 26 ~~l~-~~~~--~~~~~~VLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 101 (256)
T 1nkv_A 26 ATLG-RVLR--MKPGTRILDLGSGSGEMLCTWARDH-GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVAN 101 (256)
T ss_dssp HHHH-HHTC--CCTTCEEEEETCTTCHHHHHHHHHT-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCS
T ss_pred HHHH-HhcC--CCCCCEEEEECCCCCHHHHHHHHhc-CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcC
Confidence 3444 4444 4567799999999999999999988 678999999 667766642 36899999999773 33
Q ss_pred C-ceEEEe
Q 046950 232 P-ADAFLF 238 (239)
Q Consensus 232 ~-~D~~~l 238 (239)
. +|+|++
T Consensus 102 ~~fD~V~~ 109 (256)
T 1nkv_A 102 EKCDVAAC 109 (256)
T ss_dssp SCEEEEEE
T ss_pred CCCCEEEE
Confidence 4 999985
No 36
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=98.50 E-value=1.2e-07 Score=78.94 Aligned_cols=74 Identities=22% Similarity=0.313 Sum_probs=57.1
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHH-CCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCCC
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEA-FPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIPP 232 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p~ 232 (239)
.++ ..++ ..+..+|||+|||+|.++..+++. +|..+++++|+ |..++.+++ .++++++.+|+.++.+.
T Consensus 101 ~~~-~~~~--~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~ 177 (275)
T 1yb2_A 101 YII-MRCG--LRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISD 177 (275)
T ss_dssp ------CC--CCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCS
T ss_pred HHH-HHcC--CCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcC
Confidence 344 4444 456679999999999999999998 89999999999 667665542 25899999999887663
Q ss_pred --ceEEEe
Q 046950 233 --ADAFLF 238 (239)
Q Consensus 233 --~D~~~l 238 (239)
+|+|++
T Consensus 178 ~~fD~Vi~ 185 (275)
T 1yb2_A 178 QMYDAVIA 185 (275)
T ss_dssp CCEEEEEE
T ss_pred CCccEEEE
Confidence 999985
No 37
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.49 E-value=4.7e-07 Score=76.54 Aligned_cols=75 Identities=17% Similarity=0.157 Sum_probs=57.8
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCC-CCC
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFR-FIP 231 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~-~~p 231 (239)
..++ +.++ .+....+|||||||.|.++..+++++ ..+++++|+ |..++.+++ .++++++.+|+.+ +++
T Consensus 106 ~~l~-~~l~-~~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~ 182 (312)
T 3vc1_A 106 EFLM-DHLG-QAGPDDTLVDAGCGRGGSMVMAHRRF-GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFD 182 (312)
T ss_dssp HHHH-TTSC-CCCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCC
T ss_pred HHHH-HHhc-cCCCCCEEEEecCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCC
Confidence 3444 4443 24456799999999999999999986 678999999 667776653 3589999999987 455
Q ss_pred -C-ceEEEe
Q 046950 232 -P-ADAFLF 238 (239)
Q Consensus 232 -~-~D~~~l 238 (239)
. +|+|+.
T Consensus 183 ~~~fD~V~~ 191 (312)
T 3vc1_A 183 KGAVTASWN 191 (312)
T ss_dssp TTCEEEEEE
T ss_pred CCCEeEEEE
Confidence 3 999975
No 38
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=98.49 E-value=2.8e-07 Score=72.88 Aligned_cols=64 Identities=25% Similarity=0.300 Sum_probs=53.3
Q ss_pred CCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCCCC-C-ceEEEe
Q 046950 175 LGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRFIP-P-ADAFLF 238 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~~p-~-~D~~~l 238 (239)
..+|||||||+|.++..+++.+|..+++++|. |..++.++. ..+++++.+|+.+..| . +|+|+.
T Consensus 66 ~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~ 138 (207)
T 1jsx_A 66 GERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVIS 138 (207)
T ss_dssp SSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEEC
T ss_pred CCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEE
Confidence 57999999999999999999999999999999 666665542 2359999999987544 3 999975
No 39
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=98.49 E-value=2.9e-07 Score=75.20 Aligned_cols=66 Identities=26% Similarity=0.370 Sum_probs=54.0
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
+.+..+|||||||+|.++..+++.+|. +++++|+ |..++.+++ .+|++++.+|+.+ +.+ . +|+|+.
T Consensus 44 ~~~~~~vLDiG~G~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 120 (257)
T 3f4k_A 44 LTDDAKIADIGCGTGGQTLFLADYVKG-QITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWS 120 (257)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHCCS-EEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEe
Confidence 445679999999999999999999986 9999999 666665542 4679999999965 444 3 999975
No 40
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.49 E-value=4e-07 Score=81.80 Aligned_cols=75 Identities=16% Similarity=0.187 Sum_probs=59.1
Q ss_pred HHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCCeEEEEccCCC-CCC
Q 046950 160 TTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMFR-FIP 231 (239)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~ri~~~~gD~f~-~~p 231 (239)
...++ +.+. .....+|||||||+|.++..+++ .|..+++++|+.++++.|++ .++|+++.+|+.+ +.|
T Consensus 147 ~~~il-~~l~--~~~~~~VLDiGcGtG~la~~la~-~~~~~V~gvD~s~~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~ 222 (480)
T 3b3j_A 147 QRAIL-QNHT--DFKDKIVLDVGCGSGILSFFAAQ-AGARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP 222 (480)
T ss_dssp HHHHH-HTGG--GTTTCEEEEESCSTTHHHHHHHH-TTCSEEEEEECHHHHHHHHHHHHHTTCTTTEEEEESCTTTCCCS
T ss_pred HHHHH-Hhhh--hcCCCEEEEecCcccHHHHHHHH-cCCCEEEEEEcHHHHHHHHHHHHHcCCCCcEEEEECchhhCccC
Confidence 34455 5554 34567999999999999998887 68889999999776665542 4789999999988 666
Q ss_pred C-ceEEEe
Q 046950 232 P-ADAFLF 238 (239)
Q Consensus 232 ~-~D~~~l 238 (239)
. +|+|+.
T Consensus 223 ~~fD~Ivs 230 (480)
T 3b3j_A 223 EQVDIIIS 230 (480)
T ss_dssp SCEEEEEC
T ss_pred CCeEEEEE
Confidence 5 999985
No 41
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=98.49 E-value=1.9e-07 Score=77.97 Aligned_cols=67 Identities=21% Similarity=0.272 Sum_probs=55.0
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCC-CeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCC-CCCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPG-IKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFR-FIPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~-l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~-~~p~-~D~~~l 238 (239)
..+..+|||||||+|.++..+++.+|. .+++++|+ |..++.+++ ..+++++.+|+.+ +.+. +|+|++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~ 95 (284)
T 3gu3_A 20 ITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAIC 95 (284)
T ss_dssp CCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEE
Confidence 456789999999999999999999995 89999999 566665542 3389999999987 4444 999985
No 42
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.49 E-value=1.8e-07 Score=74.55 Aligned_cols=75 Identities=20% Similarity=0.262 Sum_probs=60.1
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHC-CCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC-CCC
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAF-PGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR-FIP 231 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~-~~p 231 (239)
..++ +.++ .....+|||||||+|.++..+++.. |+.+++++|. |..++.++. .++++++.+|+.+ +.+
T Consensus 27 ~~~~-~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~ 103 (219)
T 3dh0_A 27 EKVL-KEFG--LKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLP 103 (219)
T ss_dssp HHHH-HHHT--CCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSC
T ss_pred HHHH-HHhC--CCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCC
Confidence 4455 6555 5667799999999999999999997 8899999999 667776653 3589999999977 444
Q ss_pred C--ceEEEe
Q 046950 232 P--ADAFLF 238 (239)
Q Consensus 232 ~--~D~~~l 238 (239)
. +|+|++
T Consensus 104 ~~~fD~v~~ 112 (219)
T 3dh0_A 104 DNTVDFIFM 112 (219)
T ss_dssp SSCEEEEEE
T ss_pred CCCeeEEEe
Confidence 3 999985
No 43
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=98.47 E-value=4.4e-07 Score=74.84 Aligned_cols=74 Identities=16% Similarity=0.184 Sum_probs=57.9
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCC-CCC
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFR-FIP 231 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~-~~p 231 (239)
..++ +.++ .....+|||||||+|.++..+++.+ ..+++++|+ |..++.+++ .++++++.+|+.+ +.|
T Consensus 51 ~~l~-~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 126 (273)
T 3bus_A 51 DEMI-ALLD--VRSGDRVLDVGCGIGKPAVRLATAR-DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFE 126 (273)
T ss_dssp HHHH-HHSC--CCTTCEEEEESCTTSHHHHHHHHHS-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSC
T ss_pred HHHH-HhcC--CCCCCEEEEeCCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCC
Confidence 3455 5554 4567899999999999999999987 689999999 566665542 4689999999977 555
Q ss_pred -C-ceEEEe
Q 046950 232 -P-ADAFLF 238 (239)
Q Consensus 232 -~-~D~~~l 238 (239)
. +|+|+.
T Consensus 127 ~~~fD~v~~ 135 (273)
T 3bus_A 127 DASFDAVWA 135 (273)
T ss_dssp TTCEEEEEE
T ss_pred CCCccEEEE
Confidence 3 999975
No 44
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=98.47 E-value=4e-07 Score=70.25 Aligned_cols=60 Identities=17% Similarity=0.278 Sum_probs=51.4
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCCCCC-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFRFIP-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~~~p-~-~D~~~l 238 (239)
....+|||||||+|.++..+++.. +++.+|+ |..++. ..+++++.+|++++.+ . +|+|+.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~---~v~gvD~s~~~~~~---~~~~~~~~~d~~~~~~~~~fD~i~~ 84 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN---TVVSTDLNIRALES---HRGGNLVRADLLCSINQESVDVVVF 84 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS---EEEEEESCHHHHHT---CSSSCEEECSTTTTBCGGGCSEEEE
T ss_pred CCCCeEEEeccCccHHHHHHHhcC---cEEEEECCHHHHhc---ccCCeEEECChhhhcccCCCCEEEE
Confidence 345699999999999999999987 9999999 556666 6679999999998776 3 999985
No 45
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=98.46 E-value=2.9e-07 Score=76.51 Aligned_cols=66 Identities=20% Similarity=0.342 Sum_probs=55.5
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCCCC-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRFIP-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~~p-~-~D~~~l 238 (239)
....+|||||||+|.++..+++.+|..+++++|. |..++.++. .++++++.+|++++.+ . +|+|+.
T Consensus 108 ~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~fD~Iv~ 182 (276)
T 2b3t_A 108 EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALAGQQFAMIVS 182 (276)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGTTCCEEEEEE
T ss_pred cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcccCCccEEEE
Confidence 3456999999999999999999999999999999 666666553 3479999999998764 3 999985
No 46
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=98.46 E-value=1.9e-07 Score=75.68 Aligned_cols=67 Identities=12% Similarity=0.257 Sum_probs=56.1
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCC----C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIP----P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p----~-~D~~~l 238 (239)
..+..+|||||||+|..+..+++.+|..+++.+|+ |..++.+++ .++|+++.+|+.+..| . +|+|++
T Consensus 69 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 148 (232)
T 3ntv_A 69 MNNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALEQFENVNDKVYDMIFI 148 (232)
T ss_dssp HHTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCHHHHTTSCEEEEEE
T ss_pred hcCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhhccCCccEEEE
Confidence 44678999999999999999999999999999999 667766653 3589999999987443 3 999985
No 47
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.45 E-value=2.4e-07 Score=76.34 Aligned_cols=66 Identities=17% Similarity=0.186 Sum_probs=54.6
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
+....+|||||||+|.++..+++. |..+++++|+ |..++.+++ .++++++.+|+.+ +.+ . +|+|+.
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~ 120 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH-VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWS 120 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT-CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc-cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEE
Confidence 455789999999999999999998 8899999999 666766553 4789999999966 444 3 999985
No 48
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=98.45 E-value=4.9e-08 Score=77.29 Aligned_cols=66 Identities=26% Similarity=0.359 Sum_probs=46.2
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCCCCC------C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFRFIP------P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~~~p------~-~D~~~l 238 (239)
....+|||||||+|.++..+++.+|+.+++++|+ |..++.++. ..+++++.+|++++.+ . +|+|+.
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~~ 107 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEWLIERAERGRPWHAIVS 107 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHHHHHHHHTTCCBSEEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhhhhhhhhccCcccEEEE
Confidence 5678999999999999999999999999999999 677777764 1178999999887533 3 999885
No 49
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=98.45 E-value=3e-07 Score=80.05 Aligned_cols=74 Identities=26% Similarity=0.378 Sum_probs=59.4
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC---------CCCeEEEEccCCCCCC
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE---------ADNLKYIAGDMFRFIP 231 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~---------~~ri~~~~gD~f~~~p 231 (239)
.++ +.++ .....+|+|||||+|.++..+++.+|..+++.+|. +..++.+++ ..+++++.+|++++++
T Consensus 213 ~ll-~~l~--~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~ 289 (375)
T 4dcm_A 213 FFM-QHLP--ENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVE 289 (375)
T ss_dssp HHH-HTCC--CSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCC
T ss_pred HHH-HhCc--ccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCC
Confidence 345 5554 23347999999999999999999999999999999 667766653 1268899999999877
Q ss_pred C--ceEEEe
Q 046950 232 P--ADAFLF 238 (239)
Q Consensus 232 ~--~D~~~l 238 (239)
. +|+|++
T Consensus 290 ~~~fD~Ii~ 298 (375)
T 4dcm_A 290 PFRFNAVLC 298 (375)
T ss_dssp TTCEEEEEE
T ss_pred CCCeeEEEE
Confidence 3 999985
No 50
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.45 E-value=5.1e-07 Score=75.75 Aligned_cols=66 Identities=20% Similarity=0.147 Sum_probs=54.8
Q ss_pred cCCCcEEEecCcchHHHHHHHHHC-CCCeEEEeeh-HHHHhcCCC--------CCCeEEEEccCCC-CCC-------C-c
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAF-PGIKCTVLDL-PHAVANLPE--------ADNLKYIAGDMFR-FIP-------P-A 233 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dl-p~vi~~a~~--------~~ri~~~~gD~f~-~~p-------~-~ 233 (239)
....+|||||||+|.++..+++.+ |..+++++|+ |..++.+++ ..+++++.+|+.+ +.+ . +
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 457899999999999999999997 9999999999 667776643 5689999999977 321 3 9
Q ss_pred eEEEe
Q 046950 234 DAFLF 238 (239)
Q Consensus 234 D~~~l 238 (239)
|+|+.
T Consensus 115 D~V~~ 119 (299)
T 3g5t_A 115 DMITA 119 (299)
T ss_dssp EEEEE
T ss_pred eEEeH
Confidence 99975
No 51
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.44 E-value=2.9e-07 Score=75.52 Aligned_cols=74 Identities=15% Similarity=0.236 Sum_probs=57.4
Q ss_pred HHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC-CCC
Q 046950 160 TTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR-FIP 231 (239)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~-~~p 231 (239)
...++ +.++ .....+|||||||+|.++..+++..+ +++++|+ |..++.+++ ..+++++.+|+.+ ++|
T Consensus 26 ~~~l~-~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~ 100 (260)
T 1vl5_A 26 LAKLM-QIAA--LKGNEEVLDVATGGGHVANAFAPFVK--KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFT 100 (260)
T ss_dssp HHHHH-HHHT--CCSCCEEEEETCTTCHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSC
T ss_pred HHHHH-HHhC--CCCCCEEEEEeCCCCHHHHHHHHhCC--EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCC
Confidence 34555 5555 45678999999999999999999886 8999998 667766543 2579999999977 555
Q ss_pred -C-ceEEEe
Q 046950 232 -P-ADAFLF 238 (239)
Q Consensus 232 -~-~D~~~l 238 (239)
. +|+|+.
T Consensus 101 ~~~fD~V~~ 109 (260)
T 1vl5_A 101 DERFHIVTC 109 (260)
T ss_dssp TTCEEEEEE
T ss_pred CCCEEEEEE
Confidence 3 999985
No 52
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.44 E-value=4.4e-07 Score=75.91 Aligned_cols=76 Identities=22% Similarity=0.352 Sum_probs=57.9
Q ss_pred HHHHHHhhhh--hhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCC-C
Q 046950 161 TFVVKSECKQ--IFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFR-F 229 (239)
Q Consensus 161 ~~~l~~~~~~--~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~-~ 229 (239)
..++ +.++| .+....+|||||||+|.++..+++.+ ..+++++|+ |..++.+++ .++++++.+|+.+ +
T Consensus 68 ~~l~-~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 145 (297)
T 2o57_A 68 EWLA-SELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF-GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP 145 (297)
T ss_dssp HHHH-HHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS
T ss_pred HHHH-HHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh-CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC
Confidence 4455 55511 14567899999999999999999987 469999999 566666542 4689999999987 5
Q ss_pred CC-C-ceEEEe
Q 046950 230 IP-P-ADAFLF 238 (239)
Q Consensus 230 ~p-~-~D~~~l 238 (239)
+| . +|+|++
T Consensus 146 ~~~~~fD~v~~ 156 (297)
T 2o57_A 146 CEDNSYDFIWS 156 (297)
T ss_dssp SCTTCEEEEEE
T ss_pred CCCCCEeEEEe
Confidence 55 3 999985
No 53
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.44 E-value=3e-07 Score=73.40 Aligned_cols=67 Identities=19% Similarity=0.188 Sum_probs=53.9
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------C----CCeEEEEccCCC-CCC--CceEE
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------A----DNLKYIAGDMFR-FIP--PADAF 236 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~----~ri~~~~gD~f~-~~p--~~D~~ 236 (239)
..+..+|||||||+|.++..+++.+|..+++++|+ |..++.+++ . .+++++.+|+.. +.+ .+|+|
T Consensus 27 ~~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v 106 (217)
T 3jwh_A 27 QSNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAA 106 (217)
T ss_dssp HTTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEE
T ss_pred hcCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEE
Confidence 34567999999999999999999999999999999 666666542 1 289999999854 333 39999
Q ss_pred Ee
Q 046950 237 LF 238 (239)
Q Consensus 237 ~l 238 (239)
++
T Consensus 107 ~~ 108 (217)
T 3jwh_A 107 TV 108 (217)
T ss_dssp EE
T ss_pred ee
Confidence 85
No 54
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.44 E-value=3.5e-07 Score=75.64 Aligned_cols=67 Identities=19% Similarity=0.428 Sum_probs=56.0
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
+....+|||||||+|.++..+++.+|..+++++|. |.+++.++. .++++++.+|+.+ +.+ . +|+|++
T Consensus 35 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 111 (276)
T 3mgg_A 35 YPPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFV 111 (276)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEE
Confidence 45678999999999999999999999999999999 667766543 3579999999987 444 3 999985
No 55
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.44 E-value=2.9e-07 Score=75.37 Aligned_cols=66 Identities=21% Similarity=0.352 Sum_probs=54.4
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
.....+|||||||+|.++..+++.+ ..+++++|+ |..++.+++ .++++++.+|+.+ +.| . +|+|+.
T Consensus 53 ~~~~~~vLdiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 126 (266)
T 3ujc_A 53 LNENSKVLDIGSGLGGGCMYINEKY-GAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYS 126 (266)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEE
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeH
Confidence 4566799999999999999999988 789999999 666665543 2789999999987 555 3 999985
No 56
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.44 E-value=2e-07 Score=74.49 Aligned_cols=66 Identities=12% Similarity=0.138 Sum_probs=53.9
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------C----CCeEEEEccCCC-CCC--CceEEE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------A----DNLKYIAGDMFR-FIP--PADAFL 237 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~----~ri~~~~gD~f~-~~p--~~D~~~ 237 (239)
.+..+|||||||+|.++..+++..|..+++++|+ |..++.+++ . .+++++.+|+.. +.+ .+|+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 4567999999999999999999999999999999 667776653 1 289999999855 222 399998
Q ss_pred e
Q 046950 238 F 238 (239)
Q Consensus 238 l 238 (239)
+
T Consensus 108 ~ 108 (219)
T 3jwg_A 108 V 108 (219)
T ss_dssp E
T ss_pred E
Confidence 5
No 57
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.43 E-value=2e-07 Score=79.14 Aligned_cols=63 Identities=22% Similarity=0.321 Sum_probs=54.0
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC---CCC-C-ceEEEe
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR---FIP-P-ADAFLF 238 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~---~~p-~-~D~~~l 238 (239)
.+|||||||.|..+..+++.+|+.+++++|+ |.+++.+++ .+|++++.+|.++ ..+ . ||+|+.
T Consensus 91 ~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~ 165 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIR 165 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEE
T ss_pred CEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEE
Confidence 3999999999999999999999999999999 778887653 5699999999765 344 3 999985
No 58
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=98.43 E-value=2.4e-07 Score=71.27 Aligned_cols=70 Identities=16% Similarity=0.253 Sum_probs=55.0
Q ss_pred HhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCC----Cc
Q 046950 166 SECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIP----PA 233 (239)
Q Consensus 166 ~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p----~~ 233 (239)
..+. .....+|||||||+|.++..+++.+|..+++++|+ |..++.+++ .+++ ++.+|..+++| .+
T Consensus 19 ~~~~--~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~ 95 (178)
T 3hm2_A 19 SALA--PKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNP 95 (178)
T ss_dssp HHHC--CCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCC
T ss_pred HHhc--ccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCC
Confidence 4444 44567999999999999999999999999999999 556666542 3478 88899876443 39
Q ss_pred eEEEe
Q 046950 234 DAFLF 238 (239)
Q Consensus 234 D~~~l 238 (239)
|+|++
T Consensus 96 D~i~~ 100 (178)
T 3hm2_A 96 DVIFI 100 (178)
T ss_dssp SEEEE
T ss_pred CEEEE
Confidence 99985
No 59
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=98.42 E-value=3.6e-07 Score=74.68 Aligned_cols=74 Identities=16% Similarity=0.250 Sum_probs=58.9
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-CCCeEEEEccCCCCCC-C-ceEEE
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMFRFIP-P-ADAFL 237 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-~~ri~~~~gD~f~~~p-~-~D~~~ 237 (239)
.++ +.++ .....+|||||||+|.++..+++.+|..+++++|+ |..++.++. ..+++++.+|+.+..+ . +|+|+
T Consensus 24 ~l~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v~ 100 (259)
T 2p35_A 24 DLL-AQVP--LERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLATWKPAQKADLLY 100 (259)
T ss_dssp HHH-TTCC--CSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTTCCCSSCEEEEE
T ss_pred HHH-HhcC--CCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhhcCccCCcCEEE
Confidence 345 5444 45567999999999999999999999999999999 667776654 5689999999976223 3 99998
Q ss_pred e
Q 046950 238 F 238 (239)
Q Consensus 238 l 238 (239)
.
T Consensus 101 ~ 101 (259)
T 2p35_A 101 A 101 (259)
T ss_dssp E
T ss_pred E
Confidence 5
No 60
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.42 E-value=4.8e-07 Score=73.86 Aligned_cols=64 Identities=17% Similarity=0.142 Sum_probs=53.3
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC---CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE---ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~---~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
...+|||||||+|.++..+++..+. +++++|+ |..++.+++ ..+++++.+|+.+ +.+ . +|+|++
T Consensus 44 ~~~~vLD~GcG~G~~~~~l~~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 114 (253)
T 3g5l_A 44 NQKTVLDLGCGFGWHCIYAAEHGAK-KVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAIEPDAYNVVLS 114 (253)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTCS-EEEEEESCHHHHHHHHHHCCCTTEEEEECCGGGCCCCTTCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHcCCC-EEEEEECCHHHHHHHHHhhccCCeEEEEcchhhCCCCCCCeEEEEE
Confidence 5679999999999999999999776 8999999 667776653 5789999999976 454 3 999985
No 61
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=98.41 E-value=8.8e-07 Score=69.99 Aligned_cols=65 Identities=12% Similarity=0.154 Sum_probs=52.8
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCCCCC-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRFIPP-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~~p~-~D~~~l 238 (239)
....+|||||||+|.++..+++ +|..+++++|. |..++.+++ ..+++++.+|+++..+. +|+|+.
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~-~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~fD~i~~ 131 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHK-LGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVDGKFDLIVA 131 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCCSCEEEEEE
T ss_pred cCCCEEEEECCCCCHHHHHHHH-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCCCCceEEEE
Confidence 4567999999999999999776 68889999999 667766653 22399999999886665 999985
No 62
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=98.41 E-value=4.2e-07 Score=76.36 Aligned_cols=72 Identities=17% Similarity=0.184 Sum_probs=57.5
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCCC-
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIPP- 232 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p~- 232 (239)
.++ +.++ ..+..+|||||||+|.++..+++.+| .+++++|+ |..++.+++ .++|+++.+|+.+- +.
T Consensus 63 ~~~-~~~~--~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~~~ 137 (302)
T 3hem_A 63 LAL-DKLN--LEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF-DEP 137 (302)
T ss_dssp HHH-HTTC--CCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC-CCC
T ss_pred HHH-HHcC--CCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc-CCC
Confidence 345 5544 45677999999999999999999988 89999999 667766653 45899999999654 54
Q ss_pred ceEEEe
Q 046950 233 ADAFLF 238 (239)
Q Consensus 233 ~D~~~l 238 (239)
+|+|+.
T Consensus 138 fD~v~~ 143 (302)
T 3hem_A 138 VDRIVS 143 (302)
T ss_dssp CSEEEE
T ss_pred ccEEEE
Confidence 999875
No 63
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=98.40 E-value=1.1e-06 Score=70.05 Aligned_cols=66 Identities=18% Similarity=0.179 Sum_probs=50.3
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhc----CCC------CCCeEEEEccCCC-CCCC-ceEEE
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVAN----LPE------ADNLKYIAGDMFR-FIPP-ADAFL 237 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~----a~~------~~ri~~~~gD~f~-~~p~-~D~~~ 237 (239)
.....+|||||||+|.++..+++.+|..+++.+|+ |..++. ++. .++++++.+|+.+ +.+. .|.|.
T Consensus 25 ~~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~d~v~ 103 (218)
T 3mq2_A 25 SQYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGVGELH 103 (218)
T ss_dssp TTSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCEEEEE
T ss_pred ccCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCCCEEE
Confidence 45667999999999999999999999999999999 443332 221 3489999999977 3332 25554
No 64
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.39 E-value=2.9e-07 Score=72.33 Aligned_cols=65 Identities=14% Similarity=0.152 Sum_probs=51.7
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCC-CC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFI-PP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~-p~-~D~~~l 238 (239)
+....+|+|||||.|.++..+....|+.+++..|. +..++.++. ..++++ .|..+.. |+ +|++++
T Consensus 47 l~~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~~~~~DvVLa 121 (200)
T 3fzg_A 47 IKHVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVYKGTYDVVFL 121 (200)
T ss_dssp SCCCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHTTSEEEEEEE
T ss_pred cCCCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCCCCCcChhhH
Confidence 45688999999999999999999999999999999 557776653 235666 7776643 44 899875
No 65
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=98.38 E-value=3e-07 Score=75.28 Aligned_cols=65 Identities=12% Similarity=0.163 Sum_probs=53.0
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccC----CCCCC-----CceEE
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDM----FRFIP-----PADAF 236 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~----f~~~p-----~~D~~ 236 (239)
...+|||||||+|.++..+++++|+.+++.+|+ |.+++.|+. .+||+++.+|. +++++ .+|+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 456999999999999999999999999999999 667776552 45799999994 44554 38998
Q ss_pred Ee
Q 046950 237 LF 238 (239)
Q Consensus 237 ~l 238 (239)
+.
T Consensus 145 ~~ 146 (254)
T 2h00_A 145 MC 146 (254)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 66
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=98.38 E-value=2e-07 Score=71.83 Aligned_cols=72 Identities=17% Similarity=0.204 Sum_probs=56.8
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCCCC--C
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRFIP--P 232 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~~p--~ 232 (239)
.++ +.++ .....+|||||||+|.++..+++ +..+++++|. |..++.++. .++++++.+|+.+++| .
T Consensus 26 ~~~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 100 (183)
T 2yxd_A 26 VSI-GKLN--LNKDDVVVDVGCGSGGMTVEIAK--RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAEDVLDKLE 100 (183)
T ss_dssp HHH-HHHC--CCTTCEEEEESCCCSHHHHHHHT--TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHHHGGGCC
T ss_pred HHH-HHcC--CCCCCEEEEeCCCCCHHHHHHHh--cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccccccCCC
Confidence 344 4444 45567999999999999999998 8899999999 566666553 2689999999988665 3
Q ss_pred ceEEEe
Q 046950 233 ADAFLF 238 (239)
Q Consensus 233 ~D~~~l 238 (239)
+|+|++
T Consensus 101 ~D~i~~ 106 (183)
T 2yxd_A 101 FNKAFI 106 (183)
T ss_dssp CSEEEE
T ss_pred CcEEEE
Confidence 999986
No 67
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=98.38 E-value=3.5e-07 Score=73.23 Aligned_cols=65 Identities=20% Similarity=0.305 Sum_probs=52.4
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC-C--CCC--ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR-F--IPP--ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~-~--~p~--~D~~~l 238 (239)
...+|||||||+|.++..+++.+|+.+++++|+ +..++.++. .++|+++.+|+.+ + ++. +|.+++
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~ 114 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYL 114 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEE
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEE
Confidence 356899999999999999999999999999999 556665542 3579999999876 2 442 787764
No 68
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=98.38 E-value=7.7e-07 Score=70.75 Aligned_cols=69 Identities=19% Similarity=0.303 Sum_probs=54.8
Q ss_pred HhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC---CCCce
Q 046950 166 SECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF---IPPAD 234 (239)
Q Consensus 166 ~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~---~p~~D 234 (239)
..++ .....+|||||||+|.++..+++. ..+++.+|+ |..++.+++ .++++++.+|+.+. .+.+|
T Consensus 49 ~~l~--~~~~~~vLDlGcG~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D 124 (204)
T 3njr_A 49 AALA--PRRGELLWDIGGGSGSVSVEWCLA--GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPE 124 (204)
T ss_dssp HHHC--CCTTCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCS
T ss_pred HhcC--CCCCCEEEEecCCCCHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCC
Confidence 4444 455679999999999999999998 789999999 667766553 33899999999873 33599
Q ss_pred EEEe
Q 046950 235 AFLF 238 (239)
Q Consensus 235 ~~~l 238 (239)
++++
T Consensus 125 ~v~~ 128 (204)
T 3njr_A 125 AVFI 128 (204)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9885
No 69
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=98.38 E-value=3.8e-07 Score=79.87 Aligned_cols=74 Identities=14% Similarity=0.132 Sum_probs=56.5
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehH-HHHhcCCC---------------CCCeEEEEcc
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLP-HAVANLPE---------------ADNLKYIAGD 225 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp-~vi~~a~~---------------~~ri~~~~gD 225 (239)
.++ +.+. .....+|||||||+|..+..+++.++.-+++++|+. ..++.|+. .++|+++.||
T Consensus 164 ~il-~~l~--l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD 240 (438)
T 3uwp_A 164 QMI-DEIK--MTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGD 240 (438)
T ss_dssp HHH-HHHC--CCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECC
T ss_pred HHH-HhcC--CCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECc
Confidence 345 5444 556789999999999999999999887789999994 44443321 3689999999
Q ss_pred CCC-CC----CCceEEEe
Q 046950 226 MFR-FI----PPADAFLF 238 (239)
Q Consensus 226 ~f~-~~----p~~D~~~l 238 (239)
+++ ++ +.+|+|++
T Consensus 241 ~~~lp~~d~~~~aDVVf~ 258 (438)
T 3uwp_A 241 FLSEEWRERIANTSVIFV 258 (438)
T ss_dssp TTSHHHHHHHHTCSEEEE
T ss_pred ccCCccccccCCccEEEE
Confidence 988 33 24899875
No 70
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.36 E-value=3e-07 Score=73.01 Aligned_cols=65 Identities=18% Similarity=0.115 Sum_probs=51.8
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------------------CCCeEEEEccCCC-CCC
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------------------ADNLKYIAGDMFR-FIP 231 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------------------~~ri~~~~gD~f~-~~p 231 (239)
.....+|||||||+|..+..|++. ..+++.+|+ |.+++.|++ ..+|+++.+|+++ +.+
T Consensus 20 ~~~~~~vLD~GCG~G~~~~~la~~--g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 20 VVPGARVLVPLCGKSQDMSWLSGQ--GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCTTCEEEETTTCCSHHHHHHHHH--CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred cCCCCEEEEeCCCCcHhHHHHHHC--CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 345679999999999999999997 568999999 567776542 2579999999987 332
Q ss_pred ---CceEEEe
Q 046950 232 ---PADAFLF 238 (239)
Q Consensus 232 ---~~D~~~l 238 (239)
.+|+|+.
T Consensus 98 ~~~~fD~v~~ 107 (203)
T 1pjz_A 98 DIGHCAAFYD 107 (203)
T ss_dssp HHHSEEEEEE
T ss_pred cCCCEEEEEE
Confidence 3999874
No 71
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.36 E-value=1.6e-06 Score=69.78 Aligned_cols=63 Identities=22% Similarity=0.278 Sum_probs=52.7
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-CCCeEEEEccCCC-CCCC-ceEEE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMFR-FIPP-ADAFL 237 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-~~ri~~~~gD~f~-~~p~-~D~~~ 237 (239)
.+..+|||||||+|.++..+++..+ +++++|+ |.+++.+++ ..+++++.+|+.+ +.+. +|+|+
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~--~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~D~v~ 105 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG--DTAGLELSEDMLTHARKRLPDATLHQGDMRDFRLGRKFSAVV 105 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS--EEEEEESCHHHHHHHHHHCTTCEEEECCTTTCCCSSCEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhCCCCEEEECCHHHcccCCCCcEEE
Confidence 4567999999999999999999987 8999999 777777654 4679999999977 3444 99998
No 72
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.35 E-value=6.8e-07 Score=71.24 Aligned_cols=72 Identities=15% Similarity=0.286 Sum_probs=56.2
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC--CCCeEEEEccCCC-CCCC-ceEE
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE--ADNLKYIAGDMFR-FIPP-ADAF 236 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~--~~ri~~~~gD~f~-~~p~-~D~~ 236 (239)
.++ +.+. .....+|||||||+|.++..+++. ..+++++|. |..++.++. ..+++++.+|+.+ +.+. +|+|
T Consensus 36 ~~l-~~~~--~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~~~~~~~fD~v 110 (220)
T 3hnr_A 36 DIL-EDVV--NKSFGNVLEFGVGTGNLTNKLLLA--GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLSFEVPTSIDTI 110 (220)
T ss_dssp HHH-HHHH--HTCCSEEEEECCTTSHHHHHHHHT--TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSSCCCCSCCSEE
T ss_pred HHH-HHhh--ccCCCeEEEeCCCCCHHHHHHHhC--CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhhcCCCCCeEEE
Confidence 445 5444 346779999999999999999997 678999999 667766653 2589999999987 4444 9999
Q ss_pred Ee
Q 046950 237 LF 238 (239)
Q Consensus 237 ~l 238 (239)
++
T Consensus 111 ~~ 112 (220)
T 3hnr_A 111 VS 112 (220)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 73
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.35 E-value=1.4e-07 Score=79.57 Aligned_cols=67 Identities=16% Similarity=0.157 Sum_probs=55.2
Q ss_pred hcCCCcEEEecCcchHHHHHHH-HHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCC-CCCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIIS-EAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFR-FIPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~-~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~-~~p~-~D~~~l 238 (239)
+.+..+|||||||+|.++..++ +.+|+.+++++|+ |..++.+++ .+||+++.+|+.+ +.+. +|+|++
T Consensus 116 l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~ 193 (305)
T 3ocj_A 116 LRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTS 193 (305)
T ss_dssp CCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEEC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEE
Confidence 4567899999999999999996 6789999999999 667776552 4569999999987 3445 999985
No 74
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=98.35 E-value=3e-07 Score=74.00 Aligned_cols=65 Identities=15% Similarity=0.203 Sum_probs=52.2
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCC----CCC--ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRF----IPP--ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~----~p~--~D~~~l 238 (239)
...+|||||||+|.++..+++.+|+.+++++|. +..++.++. .++|+++.+|..+- +|. +|.+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~ 111 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQL 111 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEE
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEE
Confidence 467999999999999999999999999999999 556655442 35799999997552 442 787764
No 75
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.33 E-value=1.3e-06 Score=70.49 Aligned_cols=65 Identities=23% Similarity=0.347 Sum_probs=53.3
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC---CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE---ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~---~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
++...+|||||||+|.++..+++. ..+++++|+ |..++.++. ..+++++.+|+.+ +.| . +|+|++
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 122 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT--GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMA 122 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEE
Confidence 345679999999999999999998 668999999 667776653 5689999999987 454 3 999985
No 76
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.33 E-value=6.3e-07 Score=74.38 Aligned_cols=73 Identities=15% Similarity=0.174 Sum_probs=57.4
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-CCCeEEEEccCCC-CCCC-ceEE
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMFR-FIPP-ADAF 236 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-~~ri~~~~gD~f~-~~p~-~D~~ 236 (239)
..++ +.++ .....+|||||||+|.++..+++ |..+++++|+ |..++.++. ..+++++.+|+.+ +.+. +|+|
T Consensus 47 ~~l~-~~l~--~~~~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~fD~v 121 (279)
T 3ccf_A 47 EDLL-QLLN--PQPGEFILDLGCGTGQLTEKIAQ--SGAEVLGTDNAATMIEKARQNYPHLHFDVADARNFRVDKPLDAV 121 (279)
T ss_dssp CHHH-HHHC--CCTTCEEEEETCTTSHHHHHHHH--TTCEEEEEESCHHHHHHHHHHCTTSCEEECCTTTCCCSSCEEEE
T ss_pred HHHH-HHhC--CCCCCEEEEecCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHhhCCCCEEEECChhhCCcCCCcCEE
Confidence 4455 5554 45667999999999999999999 8889999999 667776653 3689999999976 4444 9999
Q ss_pred Ee
Q 046950 237 LF 238 (239)
Q Consensus 237 ~l 238 (239)
+.
T Consensus 122 ~~ 123 (279)
T 3ccf_A 122 FS 123 (279)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 77
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.33 E-value=1e-06 Score=71.19 Aligned_cols=65 Identities=26% Similarity=0.268 Sum_probs=51.2
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC---CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE---ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~---~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
....+|||||||+|.++..+++..+ .+++++|. |..++.++. ..+++++.+|+.+ +.+ . +|+|++
T Consensus 42 ~~~~~vLdiG~G~G~~~~~l~~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 113 (243)
T 3bkw_A 42 VGGLRIVDLGCGFGWFCRWAHEHGA-SYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAYS 113 (243)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEEE
T ss_pred cCCCEEEEEcCcCCHHHHHHHHCCC-CeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEEE
Confidence 3567999999999999999998733 38999999 566666543 3579999999977 444 3 899985
No 78
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.32 E-value=8.6e-07 Score=71.60 Aligned_cols=64 Identities=20% Similarity=0.335 Sum_probs=51.3
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC--CCCeEEEEccCCCCCC-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE--ADNLKYIAGDMFRFIP-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~--~~ri~~~~gD~f~~~p-~-~D~~~l 238 (239)
....+|||||||+|.++..+++..+ +++++|+ |..++.+++ ..+++++.+|+.+..+ . +|+|++
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~~~~a~~~~~~~v~~~~~d~~~~~~~~~fD~v~~ 109 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN--DITCVEASEEAISHAQGRLKDGITYIHSRFEDAQLPRRYDNIVL 109 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS--CEEEEESCHHHHHHHHHHSCSCEEEEESCGGGCCCSSCEEEEEE
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC--cEEEEeCCHHHHHHHHHhhhCCeEEEEccHHHcCcCCcccEEEE
Confidence 4567899999999999999999887 6889999 566666553 2289999999977544 3 999986
No 79
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=98.31 E-value=1.2e-06 Score=71.63 Aligned_cols=74 Identities=15% Similarity=0.239 Sum_probs=59.4
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHH-CCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC-CC
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEA-FPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF-IP 231 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~-~p 231 (239)
.++ ..++ .....+|||+|||+|.++..+++. .|..+++.+|. |..++.+++ .++++++.+|+.+. ++
T Consensus 87 ~~~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~ 163 (258)
T 2pwy_A 87 AMV-TLLD--LAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE 163 (258)
T ss_dssp HHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCC
T ss_pred HHH-HHcC--CCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC
Confidence 445 5554 556779999999999999999999 78999999998 666666542 36899999999875 66
Q ss_pred C--ceEEEe
Q 046950 232 P--ADAFLF 238 (239)
Q Consensus 232 ~--~D~~~l 238 (239)
. +|+|++
T Consensus 164 ~~~~D~v~~ 172 (258)
T 2pwy_A 164 EAAYDGVAL 172 (258)
T ss_dssp TTCEEEEEE
T ss_pred CCCcCEEEE
Confidence 3 999985
No 80
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=98.31 E-value=5.8e-07 Score=75.51 Aligned_cols=66 Identities=23% Similarity=0.365 Sum_probs=54.6
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCCCC--CceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRFIP--PADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~~p--~~D~~~l 238 (239)
.....+|||||||+|.++..++.+.|+.+++++|+ |+.++.|++ .+||+++.+|..+ +| .||++++
T Consensus 120 l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~-l~d~~FDvV~~ 194 (298)
T 3fpf_A 120 FRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV-IDGLEFDVLMV 194 (298)
T ss_dssp CCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG-GGGCCCSEEEE
T ss_pred CCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh-CCCCCcCEEEE
Confidence 45678999999999988877777789999999999 778887763 3789999999976 33 3999985
No 81
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=98.31 E-value=1e-06 Score=71.28 Aligned_cols=74 Identities=22% Similarity=0.337 Sum_probs=57.9
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCCCCC-
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRFIPP- 232 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~~p~- 232 (239)
..++ +.++ ..+..+|||||||+|.++..+++..| .+++++|. |..++.+++ .++++++.+|+..++|.
T Consensus 81 ~~~~-~~l~--~~~~~~vLdiG~G~G~~~~~la~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 156 (235)
T 1jg1_A 81 AIML-EIAN--LKPGMNILEVGTGSGWNAALISEIVK-TDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPK 156 (235)
T ss_dssp HHHH-HHHT--CCTTCCEEEECCTTSHHHHHHHHHHC-SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHHH-HhcC--CCCCCEEEEEeCCcCHHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCC
Confidence 4445 5554 45667999999999999999999998 89999997 667666553 34699999998666652
Q ss_pred --ceEEEe
Q 046950 233 --ADAFLF 238 (239)
Q Consensus 233 --~D~~~l 238 (239)
+|+|++
T Consensus 157 ~~fD~Ii~ 164 (235)
T 1jg1_A 157 APYDVIIV 164 (235)
T ss_dssp CCEEEEEE
T ss_pred CCccEEEE
Confidence 899985
No 82
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=98.31 E-value=1.4e-06 Score=74.97 Aligned_cols=66 Identities=17% Similarity=0.212 Sum_probs=54.4
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
....++|||||||+|.++..++++ +..+++++|..++++.|++ .++|+++.+|+.+ +.| . +|+|+.
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~-g~~~v~gvD~s~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis 139 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA-GARKVIGIECSSISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIIS 139 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHC-CCCEEEEECcHHHHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEE
Confidence 345679999999999999999987 7779999999776666542 5679999999987 566 3 999984
No 83
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.31 E-value=1e-06 Score=73.24 Aligned_cols=72 Identities=14% Similarity=0.141 Sum_probs=55.6
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCCC-
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIPP- 232 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p~- 232 (239)
.++ +.++ .....+|||||||.|.++..+++.++. +++++|+ |..++.+++ .++++++.+|+. ++|.
T Consensus 55 ~~~-~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~~~~ 129 (287)
T 1kpg_A 55 LAL-GKLG--LQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE-QFDEP 129 (287)
T ss_dssp HHH-TTTT--CCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG-GCCCC
T ss_pred HHH-HHcC--CCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChh-hCCCC
Confidence 345 5444 456679999999999999999987764 9999999 666665542 358999999994 4555
Q ss_pred ceEEEe
Q 046950 233 ADAFLF 238 (239)
Q Consensus 233 ~D~~~l 238 (239)
+|+|+.
T Consensus 130 fD~v~~ 135 (287)
T 1kpg_A 130 VDRIVS 135 (287)
T ss_dssp CSEEEE
T ss_pred eeEEEE
Confidence 999875
No 84
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.31 E-value=1.3e-06 Score=70.88 Aligned_cols=73 Identities=16% Similarity=0.297 Sum_probs=56.8
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC-CCC-
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR-FIP- 231 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~-~~p- 231 (239)
...+ +..+ .....+|||||||+|.++..+++..+ +++++|+ |..++.++. .++++++.+|+.+ +.+
T Consensus 11 ~~~~-~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~ 85 (239)
T 1xxl_A 11 GLMI-KTAE--CRAEHRVLDIGAGAGHTALAFSPYVQ--ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPD 85 (239)
T ss_dssp HHHH-HHHT--CCTTCEEEEESCTTSHHHHHHGGGSS--EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCT
T ss_pred chHH-HHhC--cCCCCEEEEEccCcCHHHHHHHHhCC--EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCC
Confidence 3445 5555 56678999999999999999999876 8999999 667666543 2579999999866 444
Q ss_pred C-ceEEEe
Q 046950 232 P-ADAFLF 238 (239)
Q Consensus 232 ~-~D~~~l 238 (239)
. +|+|+.
T Consensus 86 ~~fD~v~~ 93 (239)
T 1xxl_A 86 DSFDIITC 93 (239)
T ss_dssp TCEEEEEE
T ss_pred CcEEEEEE
Confidence 3 999985
No 85
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.30 E-value=1.4e-06 Score=70.64 Aligned_cols=63 Identities=22% Similarity=0.478 Sum_probs=51.0
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCC---CCC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFR---FIP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~---~~p-~-~D~~~l 238 (239)
+.+..+|||||||+|.++..+++. ..+++++|+ |..++.+++. ++++.+|+.+ ++| . +|+|+.
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~--~~~~~~d~~~~~~~~~~~~fD~i~~ 107 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE--GIESIGVDINEDMIKFCEGK--FNVVKSDAIEYLKSLPDKYLDGVMI 107 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH--TCCEEEECSCHHHHHHHHTT--SEEECSCHHHHHHTSCTTCBSEEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC--CCcEEEEECCHHHHHHHHhh--cceeeccHHHHhhhcCCCCeeEEEE
Confidence 456689999999999999999998 557899999 6677766543 8999999876 555 3 999985
No 86
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.30 E-value=6.7e-07 Score=75.01 Aligned_cols=63 Identities=19% Similarity=0.343 Sum_probs=51.5
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----C----CCeEEEEccCCC-CCCC-ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----A----DNLKYIAGDMFR-FIPP-ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~----~ri~~~~gD~f~-~~p~-~D~~~l 238 (239)
...+|||||||+|.++..+++. ..+++++|+ |.+++.+++ . .+|+++.+|+.+ +.+. +|+|++
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~ 156 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDL--GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVI 156 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTT--TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEE
T ss_pred CCCcEEEEeccCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEE
Confidence 3459999999999999999998 578999999 667776653 1 789999999987 4454 998874
No 87
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=98.30 E-value=7.2e-07 Score=76.61 Aligned_cols=75 Identities=23% Similarity=0.299 Sum_probs=58.1
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCCCCCC-c
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFRFIPP-A 233 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~~~p~-~ 233 (239)
..++ +.++ .....+|||||||+|.++..+++.+|+.+++++|. |.+++.+++ ...++++.+|+++..+. +
T Consensus 186 ~~ll-~~l~--~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~~~~f 262 (343)
T 2pjd_A 186 QLLL-STLT--PHTKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEVKGRF 262 (343)
T ss_dssp HHHH-HHSC--TTCCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTCCSCE
T ss_pred HHHH-HhcC--cCCCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccccCCe
Confidence 3455 5553 23356899999999999999999999999999999 556666553 23467899999886555 9
Q ss_pred eEEEe
Q 046950 234 DAFLF 238 (239)
Q Consensus 234 D~~~l 238 (239)
|+|++
T Consensus 263 D~Iv~ 267 (343)
T 2pjd_A 263 DMIIS 267 (343)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 99986
No 88
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=98.30 E-value=1.3e-06 Score=67.71 Aligned_cols=72 Identities=15% Similarity=0.326 Sum_probs=56.0
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CC--CeEEEEccCCCCCCC
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------AD--NLKYIAGDMFRFIPP 232 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~--ri~~~~gD~f~~~p~ 232 (239)
.++ +.+. .....+|||||||+|.++..+++. ..+++++|+ |..++.++. .. |++++.+|+.++.+.
T Consensus 43 ~l~-~~~~--~~~~~~vLdiG~G~G~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~ 117 (194)
T 1dus_A 43 ILV-ENVV--VDKDDDILDLGCGYGVIGIALADE--VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKD 117 (194)
T ss_dssp HHH-HHCC--CCTTCEEEEETCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTT
T ss_pred HHH-HHcc--cCCCCeEEEeCCCCCHHHHHHHHc--CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccccc
Confidence 345 5544 446679999999999999999998 779999999 666665542 22 599999999886653
Q ss_pred --ceEEEe
Q 046950 233 --ADAFLF 238 (239)
Q Consensus 233 --~D~~~l 238 (239)
+|+|++
T Consensus 118 ~~~D~v~~ 125 (194)
T 1dus_A 118 RKYNKIIT 125 (194)
T ss_dssp SCEEEEEE
T ss_pred CCceEEEE
Confidence 999985
No 89
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=98.29 E-value=9.6e-07 Score=73.33 Aligned_cols=75 Identities=13% Similarity=0.186 Sum_probs=60.0
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHH-CCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCC
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEA-FPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIP 231 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p 231 (239)
..++ ..++ .....+|||+|||+|.++..+++. .|..+++.+|. |..++.+++ .++++++.+|+.+.++
T Consensus 102 ~~i~-~~~~--~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~ 178 (277)
T 1o54_A 102 SFIA-MMLD--VKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD 178 (277)
T ss_dssp HHHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS
T ss_pred HHHH-HHhC--CCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc
Confidence 3445 5554 456679999999999999999999 78999999998 667666553 2689999999988765
Q ss_pred C--ceEEEe
Q 046950 232 P--ADAFLF 238 (239)
Q Consensus 232 ~--~D~~~l 238 (239)
. +|+|++
T Consensus 179 ~~~~D~V~~ 187 (277)
T 1o54_A 179 EKDVDALFL 187 (277)
T ss_dssp CCSEEEEEE
T ss_pred CCccCEEEE
Confidence 3 999986
No 90
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=98.29 E-value=8.3e-07 Score=72.25 Aligned_cols=66 Identities=15% Similarity=0.264 Sum_probs=51.9
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCC------------CCCCeEEEEccCCCC----CC-C-c
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLP------------EADNLKYIAGDMFRF----IP-P-A 233 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~------------~~~ri~~~~gD~f~~----~p-~-~ 233 (239)
....+|||||||+|.++..+++.+|+.+++++|+ +.+++.|+ ...+|+++.+|+.+. ++ . +
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~ 124 (235)
T 3ckk_A 45 QAQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQL 124 (235)
T ss_dssp -CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCE
T ss_pred CCCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCe
Confidence 3456899999999999999999999999999999 55555332 246799999998762 33 2 7
Q ss_pred eEEEe
Q 046950 234 DAFLF 238 (239)
Q Consensus 234 D~~~l 238 (239)
|.|++
T Consensus 125 D~v~~ 129 (235)
T 3ckk_A 125 TKMFF 129 (235)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 88765
No 91
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=98.29 E-value=1.5e-06 Score=70.64 Aligned_cols=65 Identities=12% Similarity=0.079 Sum_probs=53.1
Q ss_pred CCCcEEEecCcchHHHHHHHHH----CCCCeEEEeeh-HHHHhcCCC-CCCeEEEEccCCCC--C---C--CceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEA----FPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMFRF--I---P--PADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~----~P~l~~~~~Dl-p~vi~~a~~-~~ri~~~~gD~f~~--~---p--~~D~~~l 238 (239)
...+|||||||+|..+..+++. +|+.+++.+|+ |..++.++. .++|+++.+|..+. + + .+|+|++
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~~~~~v~~~~gD~~~~~~l~~~~~~~fD~I~~ 158 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQGDCSDLTTFEHLREMAHPLIFI 158 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGGGCTTEEEEECCSSCSGGGGGGSSSCSSEEEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhccCCceEEEECcchhHHHHHhhccCCCCEEEE
Confidence 4579999999999999999998 79999999999 556666653 57899999999773 2 2 2899875
No 92
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.29 E-value=1e-06 Score=76.73 Aligned_cols=66 Identities=17% Similarity=0.234 Sum_probs=54.8
Q ss_pred cCCCcEEEecCcchHHHHHHHHHC-CCCeEEEeeh-HHHHhcCCC--------------CCCeEEEEccCCC-------C
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAF-PGIKCTVLDL-PHAVANLPE--------------ADNLKYIAGDMFR-------F 229 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dl-p~vi~~a~~--------------~~ri~~~~gD~f~-------~ 229 (239)
....+|||||||+|.++..+++.+ |..+++++|+ |..++.+++ ..+++++.+|+.+ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 356799999999999999999987 8999999999 667766553 1689999999987 5
Q ss_pred CCC--ceEEEe
Q 046950 230 IPP--ADAFLF 238 (239)
Q Consensus 230 ~p~--~D~~~l 238 (239)
+|. +|+|+.
T Consensus 162 ~~~~~fD~V~~ 172 (383)
T 4fsd_A 162 VPDSSVDIVIS 172 (383)
T ss_dssp CCTTCEEEEEE
T ss_pred CCCCCEEEEEE
Confidence 553 999985
No 93
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=98.28 E-value=2.9e-06 Score=66.61 Aligned_cols=59 Identities=17% Similarity=0.198 Sum_probs=47.3
Q ss_pred HhhhhhhcCCCcEEEecCcchHHHHHHHHHCC--CCeEEEeehHHHHhcCCCCCCeEEEEccCCCC
Q 046950 166 SECKQIFEGLGSLVDVGGGNGTFSRIISEAFP--GIKCTVLDLPHAVANLPEADNLKYIAGDMFRF 229 (239)
Q Consensus 166 ~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P--~l~~~~~Dlp~vi~~a~~~~ri~~~~gD~f~~ 229 (239)
+.+. .+....+|||||||+|.++..+++++| ..+++.+|+.+. + ..++++++.+|+.+.
T Consensus 15 ~~~~-~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~---~-~~~~v~~~~~d~~~~ 75 (201)
T 2plw_A 15 NKYL-FLKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIM---D-PIPNVYFIQGEIGKD 75 (201)
T ss_dssp HHHC-CCCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCC---C-CCTTCEEEECCTTTT
T ss_pred HHcC-CCCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCcc---C-CCCCceEEEccccch
Confidence 4443 234567999999999999999999998 789999999762 1 246799999999774
No 94
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=98.28 E-value=2.8e-06 Score=68.51 Aligned_cols=66 Identities=17% Similarity=0.230 Sum_probs=52.7
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhc----CCCCCCeEEEEccCCC-----CCCC-ceEEE
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVAN----LPEADNLKYIAGDMFR-----FIPP-ADAFL 237 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~----a~~~~ri~~~~gD~f~-----~~p~-~D~~~ 237 (239)
+.+..+|||||||+|.++..+++.+|..+++.+|. |..++. +...++++++.+|+.+ +.+. +|+|+
T Consensus 72 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (230)
T 1fbn_A 72 IKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIY 148 (230)
T ss_dssp CCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEE
Confidence 44567999999999999999999999889999999 555543 3335789999999876 2233 89986
No 95
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=98.28 E-value=2.2e-06 Score=73.51 Aligned_cols=66 Identities=21% Similarity=0.304 Sum_probs=53.6
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
.....+|||||||+|.++..+++. +..+++++|..++++.+++ .++|+++.+|+.+ +.| . +|+|+.
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~gvD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs 137 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKA-GAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIIS 137 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEE
T ss_pred hcCCCEEEEeeccCcHHHHHHHHc-CCCEEEEEChHHHHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEE
Confidence 455679999999999999999887 5568999999767666553 3789999999987 566 3 999984
No 96
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=98.27 E-value=1.1e-06 Score=72.57 Aligned_cols=66 Identities=11% Similarity=0.232 Sum_probs=53.7
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----------CCCeEEEEccCCCC--------CC-C
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMFRF--------IP-P 232 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----------~~ri~~~~gD~f~~--------~p-~ 232 (239)
....+|||||||+|.++..+++++|..+++.+|+ |..++.++. .+|++++.+|+.+. ++ .
T Consensus 35 ~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~~~ 114 (260)
T 2ozv_A 35 DRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLPDE 114 (260)
T ss_dssp CSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCCTT
T ss_pred cCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccCCC
Confidence 4567999999999999999999999999999999 556654432 24799999999875 33 3
Q ss_pred -ceEEEe
Q 046950 233 -ADAFLF 238 (239)
Q Consensus 233 -~D~~~l 238 (239)
+|+|++
T Consensus 115 ~fD~Vv~ 121 (260)
T 2ozv_A 115 HFHHVIM 121 (260)
T ss_dssp CEEEEEE
T ss_pred CcCEEEE
Confidence 999986
No 97
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=98.27 E-value=1.8e-06 Score=68.21 Aligned_cols=65 Identities=20% Similarity=0.185 Sum_probs=52.9
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
....+|||||||+|.++..+++..+. +++++|+ |.+++.++. ..+++++.+|+.+ +.+ . +|+|+.
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~-~v~~~D~s~~~~~~a~~~~~~~~~i~~~~~d~~~~~~~~~~fD~v~~ 113 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFP-NVTSVDYSSVVVAAMQACYAHVPQLRWETMDVRKLDFPSASFDVVLE 113 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCC-CEEEEESCHHHHHHHHHHTTTCTTCEEEECCTTSCCSCSSCEEEEEE
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCC-cEEEEeCCHHHHHHHHHhcccCCCcEEEEcchhcCCCCCCcccEEEE
Confidence 55679999999999999999998776 8999999 566665542 3689999999987 555 3 999984
No 98
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.27 E-value=7.6e-07 Score=72.49 Aligned_cols=73 Identities=16% Similarity=0.234 Sum_probs=55.9
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----CCCeEEEEccCCC-CCC-C-c
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMFR-FIP-P-A 233 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----~~ri~~~~gD~f~-~~p-~-~ 233 (239)
.++ +.++ ..+..+|||||||+|.++..+++.. ..+++++|. |..++.+++ ..+++++.+|+.+ +.+ . +
T Consensus 84 ~~l-~~l~--~~~~~~vLDiG~G~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~f 159 (254)
T 1xtp_A 84 NFI-ASLP--GHGTSRALDCGAGIGRITKNLLTKL-YATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTY 159 (254)
T ss_dssp HHH-HTST--TCCCSEEEEETCTTTHHHHHTHHHH-CSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCE
T ss_pred HHH-Hhhc--ccCCCEEEEECCCcCHHHHHHHHhh-cCEEEEEeCCHHHHHHHHHHhccCCceEEEEccHHHCCCCCCCe
Confidence 344 4443 3457899999999999999999887 557999998 667766553 2679999999976 444 3 9
Q ss_pred eEEEe
Q 046950 234 DAFLF 238 (239)
Q Consensus 234 D~~~l 238 (239)
|+|++
T Consensus 160 D~v~~ 164 (254)
T 1xtp_A 160 DLIVI 164 (254)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99985
No 99
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=98.27 E-value=4.3e-07 Score=74.40 Aligned_cols=67 Identities=12% Similarity=0.204 Sum_probs=54.9
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCC-CCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCC---CCC---CceEE
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFR---FIP---PADAF 236 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~---~~p---~~D~~ 236 (239)
..+..+|||||||+|..+..+++.+| +.+++.+|+ |..++.+++ .++|+++.+|..+ .++ .+|+|
T Consensus 61 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V 140 (248)
T 3tfw_A 61 LTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI 140 (248)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred hcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence 45678999999999999999999998 899999999 667666552 4689999999865 222 49999
Q ss_pred Ee
Q 046950 237 LF 238 (239)
Q Consensus 237 ~l 238 (239)
++
T Consensus 141 ~~ 142 (248)
T 3tfw_A 141 FI 142 (248)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 100
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=98.26 E-value=1.8e-06 Score=74.38 Aligned_cols=73 Identities=18% Similarity=0.214 Sum_probs=56.3
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCCeEEEEccCCC-CCCC-
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMFR-FIPP- 232 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~ri~~~~gD~f~-~~p~- 232 (239)
.++ +.+. .....+|||||||+|.++..+++. +..+++.+|..+.++.+++ .++|+++.+|+.+ +.|.
T Consensus 41 ~i~-~~l~--~~~~~~VLDiGcGtG~ls~~la~~-g~~~V~~vD~s~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~ 116 (348)
T 2y1w_A 41 AIL-QNHT--DFKDKIVLDVGCGSGILSFFAAQA-GARKIYAVEASTMAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQ 116 (348)
T ss_dssp HHH-HTGG--GTTTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTHHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSC
T ss_pred HHH-hccc--cCCcCEEEEcCCCccHHHHHHHhC-CCCEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCc
Confidence 444 5444 345679999999999999988885 6779999999766555442 3789999999977 5565
Q ss_pred ceEEEe
Q 046950 233 ADAFLF 238 (239)
Q Consensus 233 ~D~~~l 238 (239)
+|+|+.
T Consensus 117 ~D~Ivs 122 (348)
T 2y1w_A 117 VDIIIS 122 (348)
T ss_dssp EEEEEE
T ss_pred eeEEEE
Confidence 999985
No 101
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=98.26 E-value=5.4e-07 Score=75.92 Aligned_cols=66 Identities=17% Similarity=0.281 Sum_probs=53.9
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----------CCCeEEEEccCCCCC---CC-ceEE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----------ADNLKYIAGDMFRFI---PP-ADAF 236 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----------~~ri~~~~gD~f~~~---p~-~D~~ 236 (239)
+++++|||||||+|..++++++..|..+++++|+ |.+++.+++ .+|++++.+|.++.+ +. +|+|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvI 161 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVI 161 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEE
T ss_pred CCCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEE
Confidence 4578999999999999999999888889999999 667776542 458999999988743 23 9999
Q ss_pred Ee
Q 046950 237 LF 238 (239)
Q Consensus 237 ~l 238 (239)
+.
T Consensus 162 i~ 163 (294)
T 3adn_A 162 IS 163 (294)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 102
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=98.26 E-value=1.8e-06 Score=68.61 Aligned_cols=67 Identities=18% Similarity=0.206 Sum_probs=54.7
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHC-CCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCCCC---CceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAF-PGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRFIP---PADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~~p---~~D~~~l 238 (239)
.....+|||||||+|.++..+++.. |+.+++++|. |..++.+++ .++++++.+|+..+.+ .+|+|+.
T Consensus 75 ~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 152 (215)
T 2yxe_A 75 LKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYT 152 (215)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEE
T ss_pred CCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEE
Confidence 4556799999999999999999988 7789999999 666666553 3569999999977655 3999985
No 103
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=98.26 E-value=2.2e-06 Score=67.81 Aligned_cols=69 Identities=14% Similarity=0.182 Sum_probs=55.0
Q ss_pred HhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCCCC---CceE
Q 046950 166 SECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRFIP---PADA 235 (239)
Q Consensus 166 ~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~~p---~~D~ 235 (239)
+.++ .....+|||||||+|.++..+++. ..+++.+|. |..++.+++ .++++++.+|..+..+ .+|+
T Consensus 71 ~~l~--~~~~~~vLdiG~G~G~~~~~la~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~ 146 (210)
T 3lbf_A 71 ELLE--LTPQSRVLEIGTGSGYQTAILAHL--VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDA 146 (210)
T ss_dssp HHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEE
T ss_pred HhcC--CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccE
Confidence 4444 456789999999999999999998 678999999 666666553 3579999999988543 2999
Q ss_pred EEe
Q 046950 236 FLF 238 (239)
Q Consensus 236 ~~l 238 (239)
|++
T Consensus 147 i~~ 149 (210)
T 3lbf_A 147 IIV 149 (210)
T ss_dssp EEE
T ss_pred EEE
Confidence 986
No 104
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=98.26 E-value=4.2e-07 Score=72.85 Aligned_cols=67 Identities=13% Similarity=0.253 Sum_probs=54.7
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCC-CCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCC--------CCce
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFI--------PPAD 234 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~--------p~~D 234 (239)
..+..+|||||||+|..+..+++.+| +.+++.+|+ |..++.+++ .++|+++.+|..+.+ ..+|
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD 135 (223)
T 3duw_A 56 IQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD 135 (223)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred hhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence 45678999999999999999999999 889999999 666665542 468999999987632 2389
Q ss_pred EEEe
Q 046950 235 AFLF 238 (239)
Q Consensus 235 ~~~l 238 (239)
+|++
T Consensus 136 ~v~~ 139 (223)
T 3duw_A 136 FIFI 139 (223)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9885
No 105
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=98.25 E-value=7.1e-07 Score=72.58 Aligned_cols=66 Identities=21% Similarity=0.258 Sum_probs=53.2
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC-CC----CC-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR-FI----PP-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~-~~----p~-~D~~~l 238 (239)
....+|||||||+|..+..+++..|+.+++++|. |..++.++. ..+|+++.+|+.+ +. +. +|+|+.
T Consensus 69 ~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 147 (240)
T 1xdz_A 69 NQVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTA 147 (240)
T ss_dssp GGCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEE
T ss_pred CCCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEE
Confidence 4567999999999999999999999999999999 556665542 3469999999865 32 23 999985
No 106
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=98.25 E-value=1.3e-06 Score=70.55 Aligned_cols=67 Identities=12% Similarity=0.280 Sum_probs=55.0
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCC-----CC-ceEEE
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFI-----PP-ADAFL 237 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~-----p~-~D~~~ 237 (239)
..+..+|||||||+|..+..+++.+|..+++.+|. |..++.++. .++|+++.+|+.+.. +. +|+|+
T Consensus 52 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~ 131 (233)
T 2gpy_A 52 MAAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF 131 (233)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred ccCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence 34567999999999999999999999999999999 666666553 368999999997732 33 89987
Q ss_pred e
Q 046950 238 F 238 (239)
Q Consensus 238 l 238 (239)
+
T Consensus 132 ~ 132 (233)
T 2gpy_A 132 I 132 (233)
T ss_dssp E
T ss_pred E
Confidence 5
No 107
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=98.25 E-value=1.5e-06 Score=69.48 Aligned_cols=67 Identities=13% Similarity=0.124 Sum_probs=52.1
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHH-H----HhcCCCCCCeEEEEccCCCC-----CCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPH-A----VANLPEADNLKYIAGDMFRF-----IPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~-v----i~~a~~~~ri~~~~gD~f~~-----~p~-~D~~~l 238 (239)
..+..+|||||||+|.++..+++..|+.+++.+|+.+ . ++.++...++.++.+|...+ .+. +|+|+.
T Consensus 55 ~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~ 132 (210)
T 1nt2_A 55 LRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQ 132 (210)
T ss_dssp CCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEE
Confidence 3456799999999999999999999877999999943 3 34443356799999998763 334 999875
No 108
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.25 E-value=2e-06 Score=70.05 Aligned_cols=64 Identities=19% Similarity=0.317 Sum_probs=51.7
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCC-CCCC-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFR-FIPP-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~-~~p~-~D~~~l 238 (239)
....+|||||||+|.++..+++. ..+++++|+ |..++.++. ..+++++.+|+.+ +.+. +|+|++
T Consensus 40 ~~~~~vLDlGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~ 111 (252)
T 1wzn_A 40 REVRRVLDLACGTGIPTLELAER--GYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEFDAVTM 111 (252)
T ss_dssp SCCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCEEEEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCccEEEE
Confidence 34579999999999999999986 568999999 667776653 3479999999987 4444 999975
No 109
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=98.25 E-value=5.4e-07 Score=74.01 Aligned_cols=65 Identities=15% Similarity=0.109 Sum_probs=52.4
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC-CC----CC-ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR-FI----PP-ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~-~~----p~-~D~~~l 238 (239)
...+|||||||+|..+..++..+|+.+++.+|. +..++.+++ ..+|+++.+|+.+ +. .. ||+|+.
T Consensus 80 ~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s 157 (249)
T 3g89_A 80 GPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVA 157 (249)
T ss_dssp SSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEE
T ss_pred CCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEE
Confidence 467999999999999999999999999999998 556655542 3469999999865 22 23 999975
No 110
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=98.24 E-value=1.2e-06 Score=68.00 Aligned_cols=65 Identities=18% Similarity=0.295 Sum_probs=51.2
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC---CCCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR---FIPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~---~~p~-~D~~~l 238 (239)
.....+|||||||+|.++..+++. ..+++.+|+ |..++.+++ .++++++..|+.. ..+. +|++++
T Consensus 20 ~~~~~~vLDiGcG~G~~~~~la~~--~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~ 95 (185)
T 3mti_A 20 LDDESIVVDATMGNGNDTAFLAGL--SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIF 95 (185)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEE
Confidence 345679999999999999999988 789999999 667776653 3789999977644 2234 999875
No 111
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.24 E-value=2.5e-06 Score=66.64 Aligned_cols=72 Identities=26% Similarity=0.291 Sum_probs=55.4
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC-CCCC-
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR-FIPP- 232 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~-~~p~- 232 (239)
.++ +.++ .....+|||||||+|.++..+++. ..+++++|. |..++.++. .++++++.+|+.+ +.+.
T Consensus 23 ~l~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~ 97 (199)
T 2xvm_A 23 EVL-EAVK--VVKPGKTLDLGCGNGRNSLYLAAN--GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQ 97 (199)
T ss_dssp HHH-HHTT--TSCSCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCC
T ss_pred HHH-HHhh--ccCCCeEEEEcCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCC
Confidence 444 5554 345679999999999999999987 679999999 667776553 2479999999977 3444
Q ss_pred ceEEEe
Q 046950 233 ADAFLF 238 (239)
Q Consensus 233 ~D~~~l 238 (239)
+|+|+.
T Consensus 98 ~D~v~~ 103 (199)
T 2xvm_A 98 YDFILS 103 (199)
T ss_dssp EEEEEE
T ss_pred ceEEEE
Confidence 999975
No 112
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=98.23 E-value=8.2e-07 Score=69.66 Aligned_cols=67 Identities=21% Similarity=0.286 Sum_probs=53.6
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHC-CCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC---CCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAF-PGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF---IPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~---~p~-~D~~~l 238 (239)
.....+|||+|||+|.++..+++.+ |..+++++|+ |..++.+++ .++++++.+|+.+- .+. +|+|++
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 99 (197)
T 3eey_A 20 VKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMF 99 (197)
T ss_dssp CCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEE
Confidence 3456799999999999999999986 7889999999 667776653 36899999997652 234 999875
No 113
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=98.23 E-value=1.3e-06 Score=73.78 Aligned_cols=76 Identities=22% Similarity=0.246 Sum_probs=58.6
Q ss_pred HHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCC-C--C
Q 046950 160 TTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFR-F--I 230 (239)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~-~--~ 230 (239)
...++ +.+. .....+|||+|||+|.++..+++++|+.+++.+|. |..++.+++ .+|++++.+||.+ + +
T Consensus 15 l~e~l-~~L~--~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l 91 (301)
T 1m6y_A 15 VREVI-EFLK--PEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLL 91 (301)
T ss_dssp HHHHH-HHHC--CCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHH
T ss_pred HHHHH-HhcC--CCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHH
Confidence 34455 5554 44567999999999999999999999999999999 667776543 3689999999754 1 1
Q ss_pred -----CCceEEEe
Q 046950 231 -----PPADAFLF 238 (239)
Q Consensus 231 -----p~~D~~~l 238 (239)
..+|.|++
T Consensus 92 ~~~g~~~~D~Vl~ 104 (301)
T 1m6y_A 92 KTLGIEKVDGILM 104 (301)
T ss_dssp HHTTCSCEEEEEE
T ss_pred HhcCCCCCCEEEE
Confidence 24888875
No 114
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.23 E-value=6.4e-07 Score=71.79 Aligned_cols=67 Identities=15% Similarity=0.112 Sum_probs=54.2
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCC-CCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC---C------CCc
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF---I------PPA 233 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~---~------p~~ 233 (239)
..+..+|||||||+|..+..+++.+| ..+++.+|. |..++.+++ .++|+++.+|..+. . ..+
T Consensus 62 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 141 (225)
T 3tr6_A 62 LMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY 141 (225)
T ss_dssp HHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred hhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence 34577999999999999999999998 889999999 566665542 46899999998662 1 239
Q ss_pred eEEEe
Q 046950 234 DAFLF 238 (239)
Q Consensus 234 D~~~l 238 (239)
|+|++
T Consensus 142 D~v~~ 146 (225)
T 3tr6_A 142 DLIYI 146 (225)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99985
No 115
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.22 E-value=2.5e-06 Score=69.62 Aligned_cols=65 Identities=12% Similarity=0.232 Sum_probs=51.5
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
.....+|||||||+|.++..+++. ..+++++|. |..++.++. ..+++++.+|+.+ +.+ . +|+|+.
T Consensus 37 ~~~~~~vLDiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 110 (263)
T 2yqz_A 37 KGEEPVFLELGVGTGRIALPLIAR--GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIV 110 (263)
T ss_dssp SSSCCEEEEETCTTSTTHHHHHTT--TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEE
T ss_pred CCCCCEEEEeCCcCCHHHHHHHHC--CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEE
Confidence 455679999999999999999987 578999999 556665432 4689999999966 444 2 899985
No 116
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=98.22 E-value=1.3e-06 Score=71.92 Aligned_cols=66 Identities=21% Similarity=0.352 Sum_probs=53.8
Q ss_pred hc-CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC---CC-C-ceEEE
Q 046950 172 FE-GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF---IP-P-ADAFL 237 (239)
Q Consensus 172 ~~-~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~---~p-~-~D~~~ 237 (239)
.. ...+|||||||+|.++..++++.+. +++++|+ |..++.++. .+|++++.+|+.+. ++ . +|+|+
T Consensus 46 ~~~~~~~vLDlG~G~G~~~~~la~~~~~-~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii 124 (259)
T 3lpm_A 46 LPIRKGKIIDLCSGNGIIPLLLSTRTKA-KIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVT 124 (259)
T ss_dssp CCSSCCEEEETTCTTTHHHHHHHTTCCC-EEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEE
T ss_pred CCCCCCEEEEcCCchhHHHHHHHHhcCC-cEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEE
Confidence 44 5789999999999999999999876 9999999 566666542 56899999999873 33 3 99998
Q ss_pred e
Q 046950 238 F 238 (239)
Q Consensus 238 l 238 (239)
.
T Consensus 125 ~ 125 (259)
T 3lpm_A 125 C 125 (259)
T ss_dssp E
T ss_pred E
Confidence 6
No 117
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=98.22 E-value=2.2e-06 Score=69.89 Aligned_cols=66 Identities=18% Similarity=0.326 Sum_probs=51.2
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCC--------------CCCCeEEEEccCCCC----CC-C
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLP--------------EADNLKYIAGDMFRF----IP-P 232 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~--------------~~~ri~~~~gD~f~~----~p-~ 232 (239)
....+|||||||+|.++..+++.+|+.+++++|. +.+++.++ ..++++++.+|.++. ++ .
T Consensus 48 ~~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~ 127 (246)
T 2vdv_E 48 TKKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKG 127 (246)
T ss_dssp SCCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTT
T ss_pred CCCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcccc
Confidence 3567999999999999999999999999999998 55655442 125799999998873 22 2
Q ss_pred -ceEEEe
Q 046950 233 -ADAFLF 238 (239)
Q Consensus 233 -~D~~~l 238 (239)
+|.+++
T Consensus 128 ~~d~v~~ 134 (246)
T 2vdv_E 128 QLSKMFF 134 (246)
T ss_dssp CEEEEEE
T ss_pred ccCEEEE
Confidence 666653
No 118
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.22 E-value=2.5e-06 Score=66.18 Aligned_cols=64 Identities=20% Similarity=0.316 Sum_probs=52.5
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
....+|||||||+|.++..+++. ..+++++|. |..++.++. ..+++++.+|+.+ +.| . +|+|++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~D~i~~ 113 (195)
T 3cgg_A 45 PRGAKILDAGCGQGRIGGYLSKQ--GHDVLGTDLDPILIDYAKQDFPEARWVVGDLSVDQISETDFDLIVS 113 (195)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHCTTSEEEECCTTTSCCCCCCEEEEEE
T ss_pred cCCCeEEEECCCCCHHHHHHHHC--CCcEEEEcCCHHHHHHHHHhCCCCcEEEcccccCCCCCCceeEEEE
Confidence 56779999999999999999997 568999999 667766654 4579999999987 555 3 999986
No 119
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.22 E-value=1.4e-06 Score=68.64 Aligned_cols=62 Identities=18% Similarity=0.262 Sum_probs=51.8
Q ss_pred CCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 175 LGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
..+|||||||+|.++..+++. ..+++++|+ |.+++.++. ..+++++.+|+.+ +.+ . +|+|++
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 108 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL--GHQIEGLEPATRLVELARQTHPSVTFHHGTITDLSDSPKRWAGLLA 108 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT--TCCEEEECCCHHHHHHHHHHCTTSEEECCCGGGGGGSCCCEEEEEE
T ss_pred CCeEEEecCCCCHHHHHHHhc--CCeEEEEeCCHHHHHHHHHhCCCCeEEeCcccccccCCCCeEEEEe
Confidence 679999999999999999998 558999999 667777654 5689999999977 444 3 999986
No 120
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.22 E-value=1.6e-06 Score=69.80 Aligned_cols=64 Identities=9% Similarity=0.065 Sum_probs=52.7
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-CCCeEEEEccCCCCC--C--C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMFRFI--P--P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-~~ri~~~~gD~f~~~--p--~-~D~~~l 238 (239)
....+|||||||+|.++..+++. ..+++.+|+ |..++.++. ..+++++.+|+.+.+ + . +|+|+.
T Consensus 47 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~ 117 (226)
T 3m33_A 47 TPQTRVLEAGCGHGPDAARFGPQ--AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVS 117 (226)
T ss_dssp CTTCEEEEESCTTSHHHHHHGGG--SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEe
Confidence 45679999999999999999998 679999999 667776654 568999999997743 3 2 899975
No 121
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.21 E-value=9.4e-07 Score=73.67 Aligned_cols=66 Identities=20% Similarity=0.240 Sum_probs=54.2
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----------CCCeEEEEccCCCC---CCC-ceEEE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMFRF---IPP-ADAFL 237 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----------~~ri~~~~gD~f~~---~p~-~D~~~ 237 (239)
...++|||||||+|..++++++..|..+++++|+ |.+++.+++ .+|++++.+|.++- .+. +|+|+
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii 153 (275)
T 1iy9_A 74 PNPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIM 153 (275)
T ss_dssp SSCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEE
T ss_pred CCCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEE
Confidence 4578999999999999999999878899999999 677775542 46999999998762 233 99998
Q ss_pred e
Q 046950 238 F 238 (239)
Q Consensus 238 l 238 (239)
+
T Consensus 154 ~ 154 (275)
T 1iy9_A 154 V 154 (275)
T ss_dssp E
T ss_pred E
Confidence 5
No 122
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=98.21 E-value=4.8e-07 Score=69.75 Aligned_cols=65 Identities=12% Similarity=0.136 Sum_probs=52.3
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC---CCC-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF---IPP-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~---~p~-~D~~~l 238 (239)
....+|||||||+|.++..+++. +..+++++|+ |.+++.++. .++++++.+|+.+. .+. +|+|++
T Consensus 30 ~~~~~vLDlGcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~fD~i~~ 106 (177)
T 2esr_A 30 FNGGRVLDLFAGSGGLAIEAVSR-GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCLTGRFDLVFL 106 (177)
T ss_dssp CCSCEEEEETCTTCHHHHHHHHT-TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHBCSCEEEEEE
T ss_pred cCCCeEEEeCCCCCHHHHHHHHc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhhcCCCCEEEE
Confidence 35679999999999999999987 7789999999 667776653 25799999998773 233 999886
No 123
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=98.21 E-value=1.7e-06 Score=68.17 Aligned_cols=64 Identities=22% Similarity=0.374 Sum_probs=52.0
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-CCCeEEEEccCCCCCCC-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMFRFIPP-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-~~ri~~~~gD~f~~~p~-~D~~~l 238 (239)
....+|||||||+|.++..+++. +..+++++|+ |..++.++. ..+++++.+|+.+ +|. +|+|++
T Consensus 50 ~~~~~vlD~gcG~G~~~~~l~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~d~~~-~~~~~D~v~~ 116 (200)
T 1ne2_A 50 IGGRSVIDAGTGNGILACGSYLL-GAESVTAFDIDPDAIETAKRNCGGVNFMVADVSE-ISGKYDTWIM 116 (200)
T ss_dssp SBTSEEEEETCTTCHHHHHHHHT-TBSEEEEEESCHHHHHHHHHHCTTSEEEECCGGG-CCCCEEEEEE
T ss_pred CCCCEEEEEeCCccHHHHHHHHc-CCCEEEEEECCHHHHHHHHHhcCCCEEEECcHHH-CCCCeeEEEE
Confidence 35679999999999999999987 6568999999 667776653 2289999999976 454 999986
No 124
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=98.20 E-value=1e-06 Score=68.29 Aligned_cols=65 Identities=17% Similarity=0.088 Sum_probs=52.2
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCC------CC-ceEEE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFI------PP-ADAFL 237 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~------p~-~D~~~ 237 (239)
....+|||+|||+|.++..+++ .+..+++.+|+ |..++.++. .++++++.+|+.+.. +. +|+|+
T Consensus 43 ~~~~~vLD~GcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~i~ 121 (187)
T 2fhp_A 43 FDGGMALDLYSGSGGLAIEAVS-RGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDLVL 121 (187)
T ss_dssp CSSCEEEETTCTTCHHHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCCEEEeCCccCHHHHHHHH-cCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCEEE
Confidence 3567999999999999999887 57789999999 667776653 358999999997732 33 89988
Q ss_pred e
Q 046950 238 F 238 (239)
Q Consensus 238 l 238 (239)
+
T Consensus 122 ~ 122 (187)
T 2fhp_A 122 L 122 (187)
T ss_dssp E
T ss_pred E
Confidence 5
No 125
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.19 E-value=1.2e-06 Score=72.00 Aligned_cols=63 Identities=6% Similarity=-0.012 Sum_probs=50.3
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----------------------CCCeEEEEccCCC-
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----------------------ADNLKYIAGDMFR- 228 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----------------------~~ri~~~~gD~f~- 228 (239)
...+|||||||+|..+..|++. ..+++++|+ |.+++.|++ ..+|+++.+|+++
T Consensus 68 ~~~~vLD~GCG~G~~~~~La~~--G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 68 SGLRVFFPLCGKAIEMKWFADR--GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CSCEEEETTCTTCTHHHHHHHT--TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCeEEEeCCCCcHHHHHHHHC--CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 5679999999999999999987 568999999 556665531 2579999999988
Q ss_pred CC---CCceEEEe
Q 046950 229 FI---PPADAFLF 238 (239)
Q Consensus 229 ~~---p~~D~~~l 238 (239)
+. ..+|+|+.
T Consensus 146 ~~~~~~~FD~V~~ 158 (252)
T 2gb4_A 146 PRANIGKFDRIWD 158 (252)
T ss_dssp GGGCCCCEEEEEE
T ss_pred CcccCCCEEEEEE
Confidence 33 23999984
No 126
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.19 E-value=9.1e-07 Score=73.01 Aligned_cols=74 Identities=14% Similarity=0.241 Sum_probs=56.0
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHC-CCCeEEEeehHH-------HHhcCCC-------CCCeEEEEcc-
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAF-PGIKCTVLDLPH-------AVANLPE-------ADNLKYIAGD- 225 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dlp~-------vi~~a~~-------~~ri~~~~gD- 225 (239)
.++ +.++ .....+|||||||+|.++..+++++ |+.+++++|+.+ .++.+++ .++|+++.+|
T Consensus 34 ~l~-~~~~--~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 110 (275)
T 3bkx_A 34 AIA-EAWQ--VKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTN 110 (275)
T ss_dssp HHH-HHHT--CCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCC
T ss_pred HHH-HHcC--CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECCh
Confidence 345 5554 5567899999999999999999996 889999999954 4555432 2689999998
Q ss_pred CCC---CCC-C-ceEEEe
Q 046950 226 MFR---FIP-P-ADAFLF 238 (239)
Q Consensus 226 ~f~---~~p-~-~D~~~l 238 (239)
++. +.+ . +|+|+.
T Consensus 111 ~~~~~~~~~~~~fD~v~~ 128 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVL 128 (275)
T ss_dssp TTTCCGGGTTCCCSEEEE
T ss_pred hhhccCCCCCCCEEEEEE
Confidence 654 223 3 999985
No 127
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.19 E-value=1.5e-06 Score=72.26 Aligned_cols=63 Identities=24% Similarity=0.396 Sum_probs=51.5
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC--CC-C-ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF--IP-P-ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~--~p-~-~D~~~l 238 (239)
+..+|||||||+|.++..+++. ..+++++|+ |..++.+++ .++++++.+|+.+. .+ . +|+|++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 142 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER--GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILF 142 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEE
Confidence 3579999999999999999998 679999999 667776653 27899999999773 23 3 999985
No 128
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=98.19 E-value=1.8e-06 Score=69.63 Aligned_cols=62 Identities=6% Similarity=0.104 Sum_probs=51.0
Q ss_pred cEEEecCcchHHHHHHHHHCC-CCeEEEeeh-HHHHhcCCC-------C-CCeEEEEccCCC---CC-CC-ceEEEe
Q 046950 177 SLVDVGGGNGTFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------A-DNLKYIAGDMFR---FI-PP-ADAFLF 238 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dl-p~vi~~a~~-------~-~ri~~~~gD~f~---~~-p~-~D~~~l 238 (239)
+|||||||+|..+..+++..| +.+++.+|+ |..++.+++ . +||+++.+|..+ .+ +. ||+|++
T Consensus 59 ~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V~~ 135 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLVFG 135 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEEEE
T ss_pred CEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeEEE
Confidence 999999999999999999986 889999999 556665542 3 689999999766 34 33 999986
No 129
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=98.19 E-value=1.5e-06 Score=72.52 Aligned_cols=65 Identities=25% Similarity=0.178 Sum_probs=53.9
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCC-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIP-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p-~-~D~~~l 238 (239)
.+..+|||+|||+|.++..+++..+. +++.+|+ |..++.+++ .++++++.+|+++..+ . +|++++
T Consensus 124 ~~~~~VLDlgcG~G~~~~~la~~~~~-~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~ 198 (278)
T 2frn_A 124 KPDELVVDMFAGIGHLSLPIAVYGKA-KVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILM 198 (278)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCC-EEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEE
T ss_pred CCCCEEEEecccCCHHHHHHHHhCCC-EEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEE
Confidence 45679999999999999999999887 8999999 667766542 4579999999988543 3 999986
No 130
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=98.19 E-value=2e-06 Score=68.98 Aligned_cols=67 Identities=12% Similarity=0.213 Sum_probs=53.8
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCC-CCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCC---CCC------Cc
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFR---FIP------PA 233 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~---~~p------~~ 233 (239)
..+..+|||||||+|..+..+++..| +.+++.+|+ |..++.+++ .+||+++.+|+.+ ..+ .+
T Consensus 56 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~l~~~~~~~~~~~f 135 (221)
T 3u81_A 56 EYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTL 135 (221)
T ss_dssp HHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGTTTTSCCCCC
T ss_pred hcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHHHHHHHHhcCCCce
Confidence 34578999999999999999999875 889999999 667766653 4689999999744 233 39
Q ss_pred eEEEe
Q 046950 234 DAFLF 238 (239)
Q Consensus 234 D~~~l 238 (239)
|+|++
T Consensus 136 D~V~~ 140 (221)
T 3u81_A 136 DMVFL 140 (221)
T ss_dssp SEEEE
T ss_pred EEEEE
Confidence 99986
No 131
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.18 E-value=1.2e-06 Score=70.71 Aligned_cols=62 Identities=26% Similarity=0.387 Sum_probs=50.2
Q ss_pred CCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCCC--ceEEEe
Q 046950 175 LGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIPP--ADAFLF 238 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p~--~D~~~l 238 (239)
..+|||||||+|.++..+++ +..+++++|+ |..++.+++ ..+++++.+|+.+..|. +|+|+.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~ 138 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS--PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFD 138 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB--TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHh--CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEE
Confidence 35999999999999999976 6788999999 667766553 35699999999885443 999985
No 132
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=98.17 E-value=7.6e-07 Score=71.53 Aligned_cols=67 Identities=9% Similarity=0.060 Sum_probs=54.0
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCC-CCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC---C------CCc
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF---I------PPA 233 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~---~------p~~ 233 (239)
..+..+|||||||+|..+..+++..| ..+++.+|. |..++.+++ .++|+++.+|+++. + ..+
T Consensus 67 ~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~ 146 (229)
T 2avd_A 67 LIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF 146 (229)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred hcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence 45678999999999999999999988 789999999 666665542 46899999998652 2 348
Q ss_pred eEEEe
Q 046950 234 DAFLF 238 (239)
Q Consensus 234 D~~~l 238 (239)
|++++
T Consensus 147 D~v~~ 151 (229)
T 2avd_A 147 DVAVV 151 (229)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99875
No 133
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=98.16 E-value=3.9e-06 Score=71.58 Aligned_cols=66 Identities=20% Similarity=0.349 Sum_probs=52.9
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
.....+|||||||+|.++..++++ +..+++++|..++++.+++ .++|+++.+|+.+ +.| . +|+|+.
T Consensus 36 ~~~~~~VLDiGcGtG~ls~~la~~-g~~~v~~vD~s~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs 111 (328)
T 1g6q_1 36 LFKDKIVLDVGCGTGILSMFAAKH-GAKHVIGVDMSSIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIIS 111 (328)
T ss_dssp HHTTCEEEEETCTTSHHHHHHHHT-CCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEE
T ss_pred hcCCCEEEEecCccHHHHHHHHHC-CCCEEEEEChHHHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEE
Confidence 345679999999999999988886 6668999999766665542 4689999999977 566 3 999984
No 134
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=98.16 E-value=2.3e-06 Score=69.10 Aligned_cols=67 Identities=12% Similarity=0.131 Sum_probs=52.9
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHC-CCCeEEEeehH-H----HHhcCCCCCCeEEEEccCCCC--C---CC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAF-PGIKCTVLDLP-H----AVANLPEADNLKYIAGDMFRF--I---PP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dlp-~----vi~~a~~~~ri~~~~gD~f~~--~---p~-~D~~~l 238 (239)
+....+|||||||+|.++..+++.+ |..+++.+|+. . .++.++...+++++.+|+.++ + +. +|+|++
T Consensus 75 ~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~~D~V~~ 153 (233)
T 2ipx_A 75 IKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKRTNIIPVIEDARHPHKYRMLIAMVDVIFA 153 (233)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHCTTEEEECSCTTCGGGGGGGCCCEEEEEE
T ss_pred CCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhccCCeEEEEcccCChhhhcccCCcEEEEEE
Confidence 4456799999999999999999997 78899999994 3 344443347899999999873 2 23 899985
No 135
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.16 E-value=1.3e-06 Score=70.98 Aligned_cols=65 Identities=26% Similarity=0.338 Sum_probs=51.6
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC---CCCeEEEEccCCCC-CC-------CceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE---ADNLKYIAGDMFRF-IP-------PADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~---~~ri~~~~gD~f~~-~p-------~~D~~~l 238 (239)
.....+|||||||+|.++..+++..+ +++.+|. |.+++.+++ ..+++++.+|+.+. .+ .+|+|++
T Consensus 54 ~~~~~~vLD~GcG~G~~~~~la~~~~--~v~gvD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~d~v~~ 130 (245)
T 3ggd_A 54 FNPELPLIDFACGNGTQTKFLSQFFP--RVIGLDVSKSALEIAAKENTAANISYRLLDGLVPEQAAQIHSEIGDANIYM 130 (245)
T ss_dssp SCTTSCEEEETCTTSHHHHHHHHHSS--CEEEEESCHHHHHHHHHHSCCTTEEEEECCTTCHHHHHHHHHHHCSCEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHhCC--CEEEEECCHHHHHHHHHhCcccCceEEECcccccccccccccccCccEEEE
Confidence 34567999999999999999999998 7999999 567766643 45899999999872 21 1678765
No 136
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.16 E-value=4.3e-06 Score=69.49 Aligned_cols=73 Identities=26% Similarity=0.210 Sum_probs=56.3
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCCC-CCC-
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFRF-IPP- 232 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~~-~p~- 232 (239)
..++ +.++ .....+|||||||+|.++..+++. ..+++++|. |..++.++. ..+++++.+|+.+. .+.
T Consensus 110 ~~~~-~~~~--~~~~~~vLD~GcG~G~~~~~l~~~--g~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~ 184 (286)
T 3m70_A 110 GDVV-DAAK--IISPCKVLDLGCGQGRNSLYLSLL--GYDVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQEN 184 (286)
T ss_dssp HHHH-HHHH--HSCSCEEEEESCTTCHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSC
T ss_pred HHHH-HHhh--ccCCCcEEEECCCCCHHHHHHHHC--CCeEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCC
Confidence 3445 5554 346789999999999999999998 569999999 566666543 22899999999873 344
Q ss_pred ceEEEe
Q 046950 233 ADAFLF 238 (239)
Q Consensus 233 ~D~~~l 238 (239)
+|+|++
T Consensus 185 fD~i~~ 190 (286)
T 3m70_A 185 YDFIVS 190 (286)
T ss_dssp EEEEEE
T ss_pred ccEEEE
Confidence 999986
No 137
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=98.15 E-value=5e-06 Score=66.69 Aligned_cols=67 Identities=21% Similarity=0.227 Sum_probs=52.0
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHC-CCCeEEEeeh-HHHHh----cCCCCCCeEEEEccCCCC-----CCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAF-PGIKCTVLDL-PHAVA----NLPEADNLKYIAGDMFRF-----IPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dl-p~vi~----~a~~~~ri~~~~gD~f~~-----~p~-~D~~~l 238 (239)
..+..+|||+|||+|.++..+++.. |..+++.+|. |..++ .++..++++++.+|+.++ .+. +|+|++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEE
Confidence 3456799999999999999999885 6789999999 43333 333347899999999872 233 899985
No 138
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=98.15 E-value=7.9e-07 Score=72.67 Aligned_cols=67 Identities=13% Similarity=0.152 Sum_probs=53.7
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCC-CCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC---C-----CC-c
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF---I-----PP-A 233 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~---~-----p~-~ 233 (239)
..+.++|||||||+|..+..+++..| +.+++.+|+ |..++.+++ .+||+++.+|..+. . +. +
T Consensus 58 ~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~~~~~~~~~~f 137 (242)
T 3r3h_A 58 LTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALDTLHSLLNEGGEHQF 137 (242)
T ss_dssp HHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHHHHHHHHHHHCSSCE
T ss_pred hcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHhhccCCCCE
Confidence 34578999999999999999999997 889999999 455555442 46899999998762 2 23 9
Q ss_pred eEEEe
Q 046950 234 DAFLF 238 (239)
Q Consensus 234 D~~~l 238 (239)
|+|++
T Consensus 138 D~V~~ 142 (242)
T 3r3h_A 138 DFIFI 142 (242)
T ss_dssp EEEEE
T ss_pred eEEEE
Confidence 99985
No 139
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.15 E-value=3e-06 Score=68.39 Aligned_cols=63 Identities=24% Similarity=0.369 Sum_probs=51.4
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCC-CCCC-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFR-FIPP-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~-~~p~-~D~~~l 238 (239)
....+|||||||+|.++..+++. .+++++|. |..++.+++ ..+++++.+|+.+ +.+. +|+|++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 102 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH---YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITI 102 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT---SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHhhC---CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEE
Confidence 34579999999999999999887 78999999 667776653 3579999999977 4454 999985
No 140
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=98.14 E-value=3.2e-06 Score=68.52 Aligned_cols=57 Identities=16% Similarity=0.208 Sum_probs=47.6
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCC-CCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCC
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFR 228 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~ 228 (239)
..+..+|||||||+|..+..+++.+| ..+++.+|. |..++.+++ .++|+++.+|..+
T Consensus 58 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 123 (239)
T 2hnk_A 58 ISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALE 123 (239)
T ss_dssp HHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred hhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH
Confidence 34578999999999999999999998 789999999 666665542 3579999999865
No 141
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=98.14 E-value=1.4e-06 Score=69.22 Aligned_cols=66 Identities=18% Similarity=0.222 Sum_probs=53.5
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCC-CCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC--C-CCceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF--I-PPADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~--~-p~~D~~~l 238 (239)
.+..+|||||||+|..+..+++..| +.+++.+|. |..++.+++ .++|+++.+|..+. . +.+|++++
T Consensus 55 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~ 132 (210)
T 3c3p_A 55 KQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRDIDILFM 132 (210)
T ss_dssp HCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCSEEEEEE
T ss_pred hCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCCCCEEEE
Confidence 4567999999999999999999998 889999999 667766552 45899999998662 2 22899875
No 142
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.14 E-value=2.8e-06 Score=67.52 Aligned_cols=65 Identities=18% Similarity=0.387 Sum_probs=51.8
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----CCCeEEEEccCCCCCC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMFRFIP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----~~ri~~~~gD~f~~~p-~-~D~~~l 238 (239)
.....+|||||||+|.++..+++.. .+++++|+ |..++.+++ ..+++++.+|+.+..| . +|+|++
T Consensus 49 ~~~~~~vLDiGcG~G~~~~~l~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 120 (216)
T 3ofk_A 49 SGAVSNGLEIGCAAGAFTEKLAPHC--KRLTVIDVMPRAIGRACQRTKRWSHISWAATDILQFSTAELFDLIVV 120 (216)
T ss_dssp TSSEEEEEEECCTTSHHHHHHGGGE--EEEEEEESCHHHHHHHHHHTTTCSSEEEEECCTTTCCCSCCEEEEEE
T ss_pred cCCCCcEEEEcCCCCHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcccCCCeEEEEcchhhCCCCCCccEEEE
Confidence 3456799999999999999999885 47999999 566665542 4589999999987434 3 999986
No 143
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.14 E-value=7.6e-07 Score=68.10 Aligned_cols=67 Identities=27% Similarity=0.380 Sum_probs=53.5
Q ss_pred HhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-CCCeEEEEccCCCCCC--CceEEEe
Q 046950 166 SECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMFRFIP--PADAFLF 238 (239)
Q Consensus 166 ~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-~~ri~~~~gD~f~~~p--~~D~~~l 238 (239)
+.++ .....+|||||||+|.++..+++... +++++|. |..++.++. .++++++.+| .+.+ .+|+|++
T Consensus 11 ~~~~--~~~~~~vLDiG~G~G~~~~~l~~~~~--~v~~vD~s~~~~~~a~~~~~~v~~~~~d--~~~~~~~~D~v~~ 81 (170)
T 3i9f_A 11 PNIF--EGKKGVIVDYGCGNGFYCKYLLEFAT--KLYCIDINVIALKEVKEKFDSVITLSDP--KEIPDNSVDFILF 81 (170)
T ss_dssp HHHH--SSCCEEEEEETCTTCTTHHHHHTTEE--EEEEECSCHHHHHHHHHHCTTSEEESSG--GGSCTTCEEEEEE
T ss_pred HhcC--cCCCCeEEEECCCCCHHHHHHHhhcC--eEEEEeCCHHHHHHHHHhCCCcEEEeCC--CCCCCCceEEEEE
Confidence 4444 45667999999999999999999884 8999999 667776654 5789999999 4444 3999985
No 144
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.14 E-value=3.7e-06 Score=71.04 Aligned_cols=72 Identities=18% Similarity=0.199 Sum_probs=55.6
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCCC-
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIPP- 232 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p~- 232 (239)
.++ +.++ .....+|||||||.|.++..+++.+ ..+++++|+ |..++.+++ .++++++.+|+.+ +|.
T Consensus 81 ~~~-~~~~--~~~~~~vLDiGcG~G~~~~~la~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~ 155 (318)
T 2fk8_A 81 LNL-DKLD--LKPGMTLLDIGCGWGTTMRRAVERF-DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWED-FAEP 155 (318)
T ss_dssp HHH-TTSC--CCTTCEEEEESCTTSHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGG-CCCC
T ss_pred HHH-HhcC--CCCcCEEEEEcccchHHHHHHHHHC-CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHH-CCCC
Confidence 344 4444 4556799999999999999999987 569999999 666666543 3679999999854 455
Q ss_pred ceEEEe
Q 046950 233 ADAFLF 238 (239)
Q Consensus 233 ~D~~~l 238 (239)
+|+|+.
T Consensus 156 fD~v~~ 161 (318)
T 2fk8_A 156 VDRIVS 161 (318)
T ss_dssp CSEEEE
T ss_pred cCEEEE
Confidence 999875
No 145
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.13 E-value=4.5e-06 Score=68.66 Aligned_cols=66 Identities=20% Similarity=0.379 Sum_probs=53.9
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
....+|||||||+|.++..+++.+|..+++++|. +..++.++. ..+++++.+|+.+ +.+ . +|+|+.
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSHRLPFSDTSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTTSCSBCTTCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcchhhCCCCCCceeEEEE
Confidence 3567999999999999999999999999999999 566666653 4678999999865 444 2 899874
No 146
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.13 E-value=1e-06 Score=71.65 Aligned_cols=65 Identities=17% Similarity=0.218 Sum_probs=51.0
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCC---CCCC--ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFR---FIPP--ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~---~~p~--~D~~~l 238 (239)
....+|||||||.|..+..+++..|. +++++|+ |.+++.|++ ..+++++.+|... +.|. ||.|++
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~-~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~ 134 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPID-EHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEE-EEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCc-EEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEE
Confidence 45679999999999999999988875 7899999 778887763 4568888888643 4553 888863
No 147
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=98.12 E-value=3.6e-06 Score=72.44 Aligned_cols=67 Identities=16% Similarity=0.098 Sum_probs=54.9
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHC-CCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC-CCC--CceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAF-PGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR-FIP--PADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~-~~p--~~D~~~l 238 (239)
+.+..+|||+|||+|.++++++... |+.+++++|+ |.+++.|+. .++|+++.+|+.+ +.+ .+|+|+.
T Consensus 201 ~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~~~~D~Ii~ 278 (354)
T 3tma_A 201 ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFFPEVDRILA 278 (354)
T ss_dssp CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTCCCCSEEEE
T ss_pred CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCccccCCCCEEEE
Confidence 4567799999999999999999998 9999999999 667776653 2389999999987 332 3799875
No 148
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=98.12 E-value=3.2e-06 Score=70.72 Aligned_cols=73 Identities=23% Similarity=0.414 Sum_probs=56.0
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCC-CCC
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFR-FIP 231 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~-~~p 231 (239)
..++ +..+ .....+|||||||+|.++..+++.. .+++++|+ |..++.+++ .++++++.+|+.+ +.|
T Consensus 18 ~~i~-~~~~--~~~~~~VLDiG~G~G~lt~~L~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~~~~~~~ 92 (285)
T 1zq9_A 18 NSII-DKAA--LRPTDVVLEVGPGTGNMTVKLLEKA--KKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDVLKTDLP 92 (285)
T ss_dssp HHHH-HHTC--CCTTCEEEEECCTTSTTHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCTTTSCCC
T ss_pred HHHH-HhcC--CCCCCEEEEEcCcccHHHHHHHhhC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcceecccch
Confidence 4455 5554 4556799999999999999999985 47999999 556665442 2589999999987 666
Q ss_pred CceEEEe
Q 046950 232 PADAFLF 238 (239)
Q Consensus 232 ~~D~~~l 238 (239)
.+|+++.
T Consensus 93 ~fD~vv~ 99 (285)
T 1zq9_A 93 FFDTCVA 99 (285)
T ss_dssp CCSEEEE
T ss_pred hhcEEEE
Confidence 7898864
No 149
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.12 E-value=6.3e-06 Score=67.09 Aligned_cols=63 Identities=11% Similarity=0.029 Sum_probs=52.0
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCCC-CCC-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFRF-IPP-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~~-~p~-~D~~~l 238 (239)
..+.+|+|||||.|.++..+. |..+++.+|+ +..++.++. ..+.++..+|+... .|. +|++++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~---~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLl 174 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER---GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALI 174 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT---TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc---cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHH
Confidence 567899999999999999888 9999999999 556666553 56689999999885 444 999964
No 150
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.12 E-value=4.8e-06 Score=67.12 Aligned_cols=63 Identities=13% Similarity=0.141 Sum_probs=51.1
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCC-CCCC-ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFR-FIPP-ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~-~~p~-~D~~~l 238 (239)
...+|||||||+|.++..+++. ..+++++|. |.+++.++. ..+++++.+|+.+ +.+. +|+|++
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~--~~~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~ 107 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK--FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITC 107 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEE
T ss_pred CCCeEEEeCCCCCHHHHHHHHC--CCcEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEE
Confidence 5679999999999999999988 468999999 667776653 2279999999977 4444 999986
No 151
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.12 E-value=3.9e-06 Score=67.18 Aligned_cols=65 Identities=15% Similarity=0.257 Sum_probs=51.4
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----------CCCeEEEEccCCC-CCC-C-ceEE
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----------ADNLKYIAGDMFR-FIP-P-ADAF 236 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----------~~ri~~~~gD~f~-~~p-~-~D~~ 236 (239)
+....+|||||||+|.++..+++. ..+++++|+ |..++.++. .++++++.+|+.+ +.+ . +|+|
T Consensus 28 ~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v 105 (235)
T 3sm3_A 28 LQEDDEILDIGCGSGKISLELASK--GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFA 105 (235)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEE
Confidence 345679999999999999999998 679999999 556665442 2368999999977 444 3 9999
Q ss_pred Ee
Q 046950 237 LF 238 (239)
Q Consensus 237 ~l 238 (239)
++
T Consensus 106 ~~ 107 (235)
T 3sm3_A 106 VM 107 (235)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 152
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=98.11 E-value=6.1e-06 Score=66.25 Aligned_cols=72 Identities=19% Similarity=0.304 Sum_probs=55.2
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----CCCeEEEEccCCCCCC--C-c
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMFRFIP--P-A 233 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----~~ri~~~~gD~f~~~p--~-~ 233 (239)
.++ +.+. ..+..+|||||||+|.++..+++.. .+++++|. |..++.++. ..+++++.+|+.+..+ . +
T Consensus 61 ~~~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~f 135 (231)
T 1vbf_A 61 FML-DELD--LHKGQKVLEIGTGIGYYTALIAEIV--DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYEEEKPY 135 (231)
T ss_dssp HHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCGGGCCE
T ss_pred HHH-HhcC--CCCCCEEEEEcCCCCHHHHHHHHHc--CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCcccccccCCCc
Confidence 344 4444 4556799999999999999999986 78999999 666666543 2289999999987544 2 8
Q ss_pred eEEEe
Q 046950 234 DAFLF 238 (239)
Q Consensus 234 D~~~l 238 (239)
|+|++
T Consensus 136 D~v~~ 140 (231)
T 1vbf_A 136 DRVVV 140 (231)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99885
No 153
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=98.11 E-value=3.6e-06 Score=67.95 Aligned_cols=56 Identities=11% Similarity=0.006 Sum_probs=45.2
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehH-H-HHhcC---CC------CCCeEEEEccCCC
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLP-H-AVANL---PE------ADNLKYIAGDMFR 228 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp-~-vi~~a---~~------~~ri~~~~gD~f~ 228 (239)
....+|||||||+|.++..+++++|+.+++++|+. + +++.| +. ..+++++.+|..+
T Consensus 23 ~~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~ 89 (225)
T 3p2e_A 23 QFDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAES 89 (225)
T ss_dssp TCSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTB
T ss_pred CCCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHH
Confidence 45679999999999999999999999999999995 4 33333 42 3579999999854
No 154
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=98.10 E-value=3.4e-06 Score=65.81 Aligned_cols=65 Identities=11% Similarity=0.044 Sum_probs=51.5
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCC---C-CC-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRF---I-PP-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~---~-p~-~D~~~l 238 (239)
....+|||+|||+|.++..+++ .+..+++.+|+ |..++.+++ .++++++.+|+.+. . +. +|+|++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~-~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~i~~ 119 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALS-RGAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGTTSPVDLVLA 119 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHH-TTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCCSSCCSEEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHH-CCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhccCCCccEEEE
Confidence 3467999999999999998877 46678999999 667776653 35899999998762 3 23 999986
No 155
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=98.10 E-value=1.4e-06 Score=66.29 Aligned_cols=63 Identities=19% Similarity=0.192 Sum_probs=50.7
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCCCCC-------CceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFRFIP-------PADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~~~p-------~~D~~~l 238 (239)
...+|||+|||+|.++..+++..++ ++++|. |..++.++. .-+++++.+|+.+..+ .+|+|++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~~~--v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~D~i~~ 116 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEGWE--AVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTTCE--EEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCCCe--EEEEeCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHhhhccCCceEEEEE
Confidence 5679999999999999999999876 999999 667776653 1289999999876322 4899875
No 156
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=98.10 E-value=7.5e-06 Score=69.86 Aligned_cols=75 Identities=19% Similarity=0.274 Sum_probs=56.8
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHH-CCCCeEEEeeh-HHHHhcCCC-----------------CCCeEE
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEA-FPGIKCTVLDL-PHAVANLPE-----------------ADNLKY 221 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~~~Dl-p~vi~~a~~-----------------~~ri~~ 221 (239)
..++ ..++ .....+|||||||+|.++..+++. .|+.+++.+|+ |..++.+++ .++|++
T Consensus 95 ~~~l-~~l~--~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~ 171 (336)
T 2b25_A 95 NMIL-SMMD--INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDF 171 (336)
T ss_dssp HHHH-HHHT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEE
T ss_pred HHHH-HhcC--CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEE
Confidence 3345 5554 456779999999999999999998 58899999999 556655542 268999
Q ss_pred EEccCCCC---CCC--ceEEEe
Q 046950 222 IAGDMFRF---IPP--ADAFLF 238 (239)
Q Consensus 222 ~~gD~f~~---~p~--~D~~~l 238 (239)
+.+|+.+. ++. +|+|++
T Consensus 172 ~~~d~~~~~~~~~~~~fD~V~~ 193 (336)
T 2b25_A 172 IHKDISGATEDIKSLTFDAVAL 193 (336)
T ss_dssp EESCTTCCC-------EEEEEE
T ss_pred EECChHHcccccCCCCeeEEEE
Confidence 99999873 343 899985
No 157
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.10 E-value=3.6e-06 Score=73.13 Aligned_cols=63 Identities=21% Similarity=0.327 Sum_probs=49.3
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCCeEEEEccCCC-CCCC-ceEEE
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMFR-FIPP-ADAFL 237 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~ri~~~~gD~f~-~~p~-~D~~~ 237 (239)
..++|||||||+|.++...+++ -.-+++.+|..++++.|++ .++|+++.+|+.+ ++|. +|+|+
T Consensus 83 ~~k~VLDvG~GtGiLs~~Aa~a-GA~~V~ave~s~~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~Dviv 154 (376)
T 4hc4_A 83 RGKTVLDVGAGTGILSIFCAQA-GARRVYAVEASAIWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIV 154 (376)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT-TCSEEEEEECSTTHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEE
T ss_pred CCCEEEEeCCCccHHHHHHHHh-CCCEEEEEeChHHHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEE
Confidence 3578999999999988766664 3347999998665555442 7899999999977 6776 99986
No 158
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=98.09 E-value=4.9e-06 Score=66.77 Aligned_cols=66 Identities=12% Similarity=0.224 Sum_probs=53.3
Q ss_pred hcCCCcEEEecCc-chHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccC--CCCCC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGG-NGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDM--FRFIP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG-~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~--f~~~p-~-~D~~~l 238 (239)
.....+||||||| +|.++..+++.. ..+++++|+ |..++.++. .-+++++.+|+ +.+++ . +|+|++
T Consensus 53 ~~~~~~vLDlG~G~~G~~~~~la~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~ 129 (230)
T 3evz_A 53 LRGGEVALEIGTGHTAMMALMAEKFF-NCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFS 129 (230)
T ss_dssp CCSSCEEEEECCTTTCHHHHHHHHHH-CCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEE
T ss_pred cCCCCEEEEcCCCHHHHHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEE
Confidence 4567899999999 999999999987 789999999 667776653 22799999995 55665 3 999985
No 159
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=98.09 E-value=5.4e-06 Score=70.28 Aligned_cols=74 Identities=15% Similarity=0.304 Sum_probs=57.1
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCC-CCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCCCC--
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFP-GIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRFIP-- 231 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~~p-- 231 (239)
.++ +... ..+..+|||||||.|.++..+++..+ +.+++++|+ |+.++.+++ .++++++.+|+.+..+
T Consensus 66 ~l~-~~l~--~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~ 142 (317)
T 1dl5_A 66 LFM-EWVG--LDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEF 142 (317)
T ss_dssp HHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGG
T ss_pred HHH-HhcC--CCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccC
Confidence 344 4444 45667999999999999999999988 488999999 666666553 3469999999987443
Q ss_pred -CceEEEe
Q 046950 232 -PADAFLF 238 (239)
Q Consensus 232 -~~D~~~l 238 (239)
.+|+|+.
T Consensus 143 ~~fD~Iv~ 150 (317)
T 1dl5_A 143 SPYDVIFV 150 (317)
T ss_dssp CCEEEEEE
T ss_pred CCeEEEEE
Confidence 3899985
No 160
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.09 E-value=4.8e-06 Score=68.87 Aligned_cols=64 Identities=9% Similarity=0.020 Sum_probs=53.8
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----------CCCeEEEEccCCCCCCCceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMFRFIPPADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----------~~ri~~~~gD~f~~~p~~D~~~l 238 (239)
+.+++|||||||+|..+.++++. | .+++++|+ |.+++.+++ .+|++++.+|.++-+..+|+|++
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~-~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~~~fD~Ii~ 145 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY-D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDIKKYDLIFC 145 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS-S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCCCCEEEEEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC-C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHHhhCCEEEE
Confidence 45689999999999999999998 8 89999999 778887764 35899999998774434999985
No 161
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=98.09 E-value=8.1e-06 Score=62.01 Aligned_cols=63 Identities=16% Similarity=0.250 Sum_probs=51.6
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHC-CCCeEEEeehHHHHhcCCCCCCeEEEEccCCCC---------CC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAF-PGIKCTVLDLPHAVANLPEADNLKYIAGDMFRF---------IP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dlp~vi~~a~~~~ri~~~~gD~f~~---------~p-~-~D~~~l 238 (239)
.....+|||||||+|.++..+++.+ |+.+++++|+.+ ... ..+++++.+|+.+. .+ . +|+|+.
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~---~~~~~~~~~d~~~~~~~~~~~~~~~~~~~D~i~~ 94 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP---IVGVDFLQGDFRDELVMKALLERVGDSKVQVVMS 94 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC---CTTEEEEESCTTSHHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc---cCcEEEEEcccccchhhhhhhccCCCCceeEEEE
Confidence 3456799999999999999999995 789999999977 322 36899999999873 55 3 899985
No 162
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=98.08 E-value=4.8e-06 Score=72.40 Aligned_cols=66 Identities=17% Similarity=0.229 Sum_probs=52.7
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC-------CCCeEEEEccCCC-CCCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE-------ADNLKYIAGDMFR-FIPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~-------~~ri~~~~gD~f~-~~p~-~D~~~l 238 (239)
.....+|||||||+|.++..++++ ...+++++|..++++.+++ .++|+++.+|+.+ +.|. +|+|+.
T Consensus 61 ~~~~~~VLDlGcGtG~ls~~la~~-g~~~V~gvD~s~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~ 135 (376)
T 3r0q_C 61 HFEGKTVLDVGTGSGILAIWSAQA-GARKVYAVEATKMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIIS 135 (376)
T ss_dssp TTTTCEEEEESCTTTHHHHHHHHT-TCSEEEEEESSTTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEE
T ss_pred cCCCCEEEEeccCcCHHHHHHHhc-CCCEEEEEccHHHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEE
Confidence 345689999999999999999987 3348999999866555542 5789999999977 4555 999975
No 163
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=98.07 E-value=2.1e-06 Score=70.36 Aligned_cols=67 Identities=12% Similarity=0.107 Sum_probs=53.9
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCC-CCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC---C------CC-
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF---I------PP- 232 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~---~------p~- 232 (239)
..+.++|||||||+|..+..+++..| +.+++.+|. |..++.+++ .++|+++.+|..+- . +.
T Consensus 77 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 156 (247)
T 1sui_A 77 LINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS 156 (247)
T ss_dssp HTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred hhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence 34578999999999999999999998 889999999 556665542 46899999998652 2 33
Q ss_pred ceEEEe
Q 046950 233 ADAFLF 238 (239)
Q Consensus 233 ~D~~~l 238 (239)
+|+|++
T Consensus 157 fD~V~~ 162 (247)
T 1sui_A 157 YDFIFV 162 (247)
T ss_dssp BSEEEE
T ss_pred EEEEEE
Confidence 999985
No 164
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.07 E-value=1.5e-05 Score=67.09 Aligned_cols=88 Identities=18% Similarity=0.131 Sum_probs=58.8
Q ss_pred HHHHHHHhhchhhhHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC---------
Q 046950 146 QRFNEAMASDSEIMTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE--------- 215 (239)
Q Consensus 146 ~~f~~~m~~~~~~~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~--------- 215 (239)
+.|++.+.. .....++ +.+........+|||||||+|.++..+++ .+..+++++|+ +..++.++.
T Consensus 10 r~~~~~~k~---~l~~~~~-~~l~~~~~~~~~VLDlGcG~G~~~~~l~~-~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~ 84 (313)
T 3bgv_A 10 RNFNNWMKS---VLIGEFL-EKVRQKKKRDITVLDLGCGKGGDLLKWKK-GRINKLVCTDIADVSVKQCQQRYEDMKNRR 84 (313)
T ss_dssp HHHHHHHHH---HHHHHHH-HHHHHTC--CCEEEEETCTTTTTHHHHHH-TTCSEEEEEESCHHHHHHHHHHHHHHHSSS
T ss_pred hhccHHHHH---HHHHHHH-HHhhhccCCCCEEEEECCCCcHHHHHHHh-cCCCEEEEEeCCHHHHHHHHHHHHHhhhcc
Confidence 455555433 2223344 43331223567999999999999999988 47789999999 556665542
Q ss_pred ----CCCeEEEEccCCCC-----C--C--CceEEEe
Q 046950 216 ----ADNLKYIAGDMFRF-----I--P--PADAFLF 238 (239)
Q Consensus 216 ----~~ri~~~~gD~f~~-----~--p--~~D~~~l 238 (239)
..+++++.+|+.+. + + .+|+|+.
T Consensus 85 ~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~ 120 (313)
T 3bgv_A 85 DSEYIFSAEFITADSSKELLIDKFRDPQMCFDICSC 120 (313)
T ss_dssp CC-CCCEEEEEECCTTTSCSTTTCSSTTCCEEEEEE
T ss_pred cccccceEEEEEecccccchhhhcccCCCCEEEEEE
Confidence 23799999999763 3 3 3899975
No 165
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.07 E-value=2.7e-06 Score=67.36 Aligned_cols=65 Identities=15% Similarity=0.104 Sum_probs=51.6
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCC-CCCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFR-FIPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~-~~p~-~D~~~l 238 (239)
+....+|||||||+|.++..+++. ..+++++|+ |..++.++..-+++++.+|+.+ +.+. +|+|++
T Consensus 41 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~d~~~~~~~~~fD~v~~ 108 (211)
T 3e23_A 41 LPAGAKILELGCGAGYQAEAMLAA--GFDVDATDGSPELAAEASRRLGRPVRTMLFHQLDAIDAYDAVWA 108 (211)
T ss_dssp SCTTCEEEESSCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHTSCCEECCGGGCCCCSCEEEEEE
T ss_pred cCCCCcEEEECCCCCHHHHHHHHc--CCeEEEECCCHHHHHHHHHhcCCceEEeeeccCCCCCcEEEEEe
Confidence 445679999999999999999987 568999999 6677766543368889999876 3223 999986
No 166
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=98.07 E-value=5.6e-06 Score=69.65 Aligned_cols=73 Identities=14% Similarity=0.246 Sum_probs=55.9
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----CCCeEEEEccCCC-CCCC--
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMFR-FIPP-- 232 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----~~ri~~~~gD~f~-~~p~-- 232 (239)
..++ +..+ .....+|||||||+|.++..|++. ..+++++|+ +..++.+++ .++++++.+|+.+ +++.
T Consensus 40 ~~Iv-~~l~--~~~~~~VLEIG~G~G~lT~~La~~--~~~V~aVEid~~li~~a~~~~~~~~~v~vi~gD~l~~~~~~~~ 114 (295)
T 3gru_A 40 NKAV-ESAN--LTKDDVVLEIGLGKGILTEELAKN--AKKVYVIEIDKSLEPYANKLKELYNNIEIIWGDALKVDLNKLD 114 (295)
T ss_dssp HHHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEEESCGGGHHHHHHHHHHCSSEEEEESCTTTSCGGGSC
T ss_pred HHHH-HhcC--CCCcCEEEEECCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHHhccCCCeEEEECchhhCCcccCC
Confidence 3445 5544 455679999999999999999998 568999999 455555543 4789999999988 6664
Q ss_pred ceEEEe
Q 046950 233 ADAFLF 238 (239)
Q Consensus 233 ~D~~~l 238 (239)
+|+|+.
T Consensus 115 fD~Iv~ 120 (295)
T 3gru_A 115 FNKVVA 120 (295)
T ss_dssp CSEEEE
T ss_pred ccEEEE
Confidence 888763
No 167
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.07 E-value=1.3e-06 Score=74.48 Aligned_cols=66 Identities=14% Similarity=0.236 Sum_probs=54.0
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----------CCCeEEEEccCCCC---CCC-ceEEE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMFRF---IPP-ADAFL 237 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----------~~ri~~~~gD~f~~---~p~-~D~~~ 237 (239)
....+|||||||+|..+..+++..|..+++++|+ |.+++.+++ .+|++++.+|.++. .+. +|+|+
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi 194 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 194 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEE
Confidence 4568999999999999999999888999999999 667765542 36899999998763 233 99998
Q ss_pred e
Q 046950 238 F 238 (239)
Q Consensus 238 l 238 (239)
+
T Consensus 195 ~ 195 (321)
T 2pt6_A 195 V 195 (321)
T ss_dssp E
T ss_pred E
Confidence 4
No 168
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=98.07 E-value=3e-06 Score=65.51 Aligned_cols=69 Identities=20% Similarity=0.250 Sum_probs=54.3
Q ss_pred HhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCC---Cce
Q 046950 166 SECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIP---PAD 234 (239)
Q Consensus 166 ~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p---~~D 234 (239)
..+. .....+|||||||+|.++..+++.. .+++++|. |..++.++. .++++++.+|+.+++| .+|
T Consensus 27 ~~~~--~~~~~~vldiG~G~G~~~~~l~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D 102 (192)
T 1l3i_A 27 CLAE--PGKNDVAVDVGCGTGGVTLELAGRV--RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCKIPDID 102 (192)
T ss_dssp HHHC--CCTTCEEEEESCTTSHHHHHHHTTS--SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTTSCCEE
T ss_pred HhcC--CCCCCEEEEECCCCCHHHHHHHHhc--CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhcccCCCCC
Confidence 4444 4566799999999999999999987 78999999 666666543 2689999999876433 499
Q ss_pred EEEe
Q 046950 235 AFLF 238 (239)
Q Consensus 235 ~~~l 238 (239)
++++
T Consensus 103 ~v~~ 106 (192)
T 1l3i_A 103 IAVV 106 (192)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9885
No 169
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.07 E-value=2.2e-06 Score=73.44 Aligned_cols=66 Identities=15% Similarity=0.208 Sum_probs=54.4
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----------CCCeEEEEccCCC---CCC-C-ceEE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMFR---FIP-P-ADAF 236 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----------~~ri~~~~gD~f~---~~p-~-~D~~ 236 (239)
...++|||||||+|..++.+++..|..+++++|+ |.+++.+++ .+|++++.+|.++ ..+ . +|+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 4568999999999999999999888999999999 667776542 3689999999765 233 3 9999
Q ss_pred Ee
Q 046950 237 LF 238 (239)
Q Consensus 237 ~l 238 (239)
++
T Consensus 199 i~ 200 (334)
T 1xj5_A 199 IV 200 (334)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 170
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=98.07 E-value=8.1e-06 Score=67.52 Aligned_cols=74 Identities=16% Similarity=0.264 Sum_probs=57.5
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHH-CCCCeEEEeeh-HHHHhcCCC---------CCCeEEEEccCCCC-
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEA-FPGIKCTVLDL-PHAVANLPE---------ADNLKYIAGDMFRF- 229 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~~~Dl-p~vi~~a~~---------~~ri~~~~gD~f~~- 229 (239)
.++ ..++ .....+|||||||+|.++..+++. .|..+++.+|. |..++.+++ .++++++.+|+.+.
T Consensus 90 ~i~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~ 166 (280)
T 1i9g_A 90 QIV-HEGD--IFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSE 166 (280)
T ss_dssp HHH-HHTT--CCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCC
T ss_pred HHH-HHcC--CCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcC
Confidence 444 5444 456679999999999999999996 68999999999 666665542 35899999999773
Q ss_pred CC-C-ceEEEe
Q 046950 230 IP-P-ADAFLF 238 (239)
Q Consensus 230 ~p-~-~D~~~l 238 (239)
.+ . +|+|++
T Consensus 167 ~~~~~~D~v~~ 177 (280)
T 1i9g_A 167 LPDGSVDRAVL 177 (280)
T ss_dssp CCTTCEEEEEE
T ss_pred CCCCceeEEEE
Confidence 43 3 899985
No 171
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.06 E-value=2.2e-06 Score=72.45 Aligned_cols=66 Identities=15% Similarity=0.201 Sum_probs=54.2
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----------CCCeEEEEccCCC---CCCC-ceEEE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMFR---FIPP-ADAFL 237 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----------~~ri~~~~gD~f~---~~p~-~D~~~ 237 (239)
...++|||||||+|..+..+++..|..+++++|+ |.+++.+++ .+|++++.+|.++ ..+. +|+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 4568999999999999999999888899999999 667765542 4689999999865 2233 99998
Q ss_pred e
Q 046950 238 F 238 (239)
Q Consensus 238 l 238 (239)
+
T Consensus 174 ~ 174 (304)
T 2o07_A 174 T 174 (304)
T ss_dssp E
T ss_pred E
Confidence 5
No 172
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=98.06 E-value=3.8e-06 Score=69.75 Aligned_cols=67 Identities=21% Similarity=0.170 Sum_probs=55.4
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCC-CCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRF-IPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~-~p~-~D~~~l 238 (239)
+.+..+|||+|||+|.++..+++..+..+++.+|+ |..++.++. .++++++.+|+++. .+. +|+|++
T Consensus 117 ~~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~ 192 (272)
T 3a27_A 117 SNENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIM 192 (272)
T ss_dssp CCTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEE
T ss_pred cCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEE
Confidence 44567999999999999999999999899999999 777776653 35789999999875 223 899986
No 173
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=98.06 E-value=2.2e-06 Score=69.41 Aligned_cols=63 Identities=22% Similarity=0.351 Sum_probs=51.5
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCC--CceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIP--PADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p--~~D~~~l 238 (239)
...+|||||||+|.++..+++.. .+++.+|+ |..++.++. .++++++.+|+.+..+ .+|+|++
T Consensus 78 ~~~~vLD~gcG~G~~~~~la~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~ 150 (241)
T 3gdh_A 78 KCDVVVDAFCGVGGNTIQFALTG--MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASFLKADVVFL 150 (241)
T ss_dssp CCSEEEETTCTTSHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGGCCCSEEEE
T ss_pred CCCEEEECccccCHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhcccCCCCEEEE
Confidence 56799999999999999999974 88999999 667776653 2589999999977333 3999985
No 174
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.06 E-value=6.2e-06 Score=65.54 Aligned_cols=72 Identities=15% Similarity=0.107 Sum_probs=54.9
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCCC-----CC-C-c
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFRF-----IP-P-A 233 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~~-----~p-~-~ 233 (239)
.++ ..+. .....+|||||||+|.++..+++. ..+++++|+ |..++.+++..++++..+|+.+- .+ . +
T Consensus 43 ~~~-~~~~--~~~~~~vLdiG~G~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~f 117 (227)
T 3e8s_A 43 AIL-LAIL--GRQPERVLDLGCGEGWLLRALADR--GIEAVGVDGDRTLVDAARAAGAGEVHLASYAQLAEAKVPVGKDY 117 (227)
T ss_dssp HHH-HHHH--HTCCSEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHTCSSCEEECCHHHHHTTCSCCCCCE
T ss_pred HHH-HHhh--cCCCCEEEEeCCCCCHHHHHHHHC--CCEEEEEcCCHHHHHHHHHhcccccchhhHHhhcccccccCCCc
Confidence 344 5444 345689999999999999999988 668999999 66777776667788888887552 22 3 8
Q ss_pred eEEEe
Q 046950 234 DAFLF 238 (239)
Q Consensus 234 D~~~l 238 (239)
|+|++
T Consensus 118 D~v~~ 122 (227)
T 3e8s_A 118 DLICA 122 (227)
T ss_dssp EEEEE
T ss_pred cEEEE
Confidence 99875
No 175
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=98.06 E-value=7.5e-06 Score=71.79 Aligned_cols=62 Identities=21% Similarity=0.278 Sum_probs=52.0
Q ss_pred CCCcEEEecCcchHHHHHHHHHC-CCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCCCCC--CceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAF-PGIKCTVLDL-PHAVANLPEADNLKYIAGDMFRFIP--PADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~~~p--~~D~~~l 238 (239)
...+|+|+|||+|.++..+++++ +..+++++|+ |.+++.+ .+++++.+|+++..+ .+|+|+.
T Consensus 39 ~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---~~~~~~~~D~~~~~~~~~fD~Ii~ 104 (421)
T 2ih2_A 39 RGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---PWAEGILADFLLWEPGEAFDLILG 104 (421)
T ss_dssp TTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---TTEEEEESCGGGCCCSSCEEEEEE
T ss_pred CCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---CCCcEEeCChhhcCccCCCCEEEE
Confidence 35699999999999999999987 7889999999 5555554 689999999988544 3999985
No 176
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.05 E-value=6e-06 Score=65.74 Aligned_cols=63 Identities=19% Similarity=0.312 Sum_probs=49.2
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCC---CCC-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFR---FIP-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~---~~p-~-~D~~~l 238 (239)
....+|||||||+|.++..+++. + .+++++|. +..++.++.. -.+++.+|+.+ +.+ . +|+|++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~-~-~~~~~~D~~~~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~fD~v~~ 99 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN-G-TRVSGIEAFPEAAEQAKEK-LDHVVLGDIETMDMPYEEEQFDCVIF 99 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT-T-CEEEEEESSHHHHHHHHTT-SSEEEESCTTTCCCCSCTTCEEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc-C-CeEEEEeCCHHHHHHHHHh-CCcEEEcchhhcCCCCCCCccCEEEE
Confidence 45679999999999999999998 5 89999999 5666666532 24788999875 344 3 899985
No 177
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.05 E-value=1.9e-06 Score=72.88 Aligned_cols=66 Identities=17% Similarity=0.263 Sum_probs=53.9
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----------CCCeEEEEccCCCC----CCC-ceEE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMFRF----IPP-ADAF 236 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----------~~ri~~~~gD~f~~----~p~-~D~~ 236 (239)
....+|||||||.|..+..+++..|..+++++|+ |.+++.+++ .+|++++.+|.++- .+. +|+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 4568999999999999999999888889999999 667765542 46899999998762 133 9999
Q ss_pred Ee
Q 046950 237 LF 238 (239)
Q Consensus 237 ~l 238 (239)
++
T Consensus 174 i~ 175 (304)
T 3bwc_A 174 II 175 (304)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 178
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=98.05 E-value=2.4e-06 Score=71.94 Aligned_cols=66 Identities=11% Similarity=0.166 Sum_probs=53.7
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----------CCCeEEEEccCCCC---CCC-ceEEE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMFRF---IPP-ADAFL 237 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----------~~ri~~~~gD~f~~---~p~-~D~~~ 237 (239)
....+|||||||+|..+..+++..|..+++++|+ |.+++.+++ .+|++++.+|.++. .+. +|+|+
T Consensus 89 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 168 (296)
T 1inl_A 89 PNPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII 168 (296)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEE
Confidence 3467999999999999999999888899999999 667765542 46899999997652 233 99998
Q ss_pred e
Q 046950 238 F 238 (239)
Q Consensus 238 l 238 (239)
+
T Consensus 169 ~ 169 (296)
T 1inl_A 169 I 169 (296)
T ss_dssp E
T ss_pred E
Confidence 5
No 179
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=98.05 E-value=1e-05 Score=65.52 Aligned_cols=65 Identities=15% Similarity=0.240 Sum_probs=53.3
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCC-CC--ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFI-PP--ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~-p~--~D~~~l 238 (239)
.....+|||||||+|.++..+++. ..+++++|. |..++.+++ .++++++.+|+.+.. +. +|++++
T Consensus 89 ~~~~~~vldiG~G~G~~~~~l~~~--~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~ 164 (248)
T 2yvl_A 89 LNKEKRVLEFGTGSGALLAVLSEV--AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFV 164 (248)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHH--SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEE
T ss_pred CCCCCEEEEeCCCccHHHHHHHHh--CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEE
Confidence 455679999999999999999998 779999998 566665542 368999999998866 43 999985
No 180
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=98.05 E-value=2.3e-06 Score=69.22 Aligned_cols=65 Identities=17% Similarity=0.194 Sum_probs=50.3
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCC---CCC-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFR---FIP-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~---~~p-~-~D~~~l 238 (239)
....+|||||||+|.++..+++..+ .+++++|+ |.+++.+++ ..+++++.+|+.+ +++ . +|+|+.
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~ 134 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPI-DEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILY 134 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCE-EEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCC-CeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEE
Confidence 3467999999999999999966544 38999999 567666553 4679999999865 455 3 999975
No 181
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=98.04 E-value=2.3e-06 Score=69.90 Aligned_cols=41 Identities=17% Similarity=0.147 Sum_probs=36.0
Q ss_pred CCCcEEEecCcchHHHHHHHHH--CCCCeEEEeeh-HHHHhcCC
Q 046950 174 GLGSLVDVGGGNGTFSRIISEA--FPGIKCTVLDL-PHAVANLP 214 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~--~P~l~~~~~Dl-p~vi~~a~ 214 (239)
...+|+|+|||+|.++..+++. +|..+++.+|+ |.+++.|+
T Consensus 51 ~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~ 94 (250)
T 1o9g_A 51 GPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAA 94 (250)
T ss_dssp SCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHH
T ss_pred CCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHH
Confidence 4569999999999999999998 88889999999 66777665
No 182
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=98.04 E-value=7.4e-06 Score=72.43 Aligned_cols=67 Identities=15% Similarity=0.203 Sum_probs=51.2
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcC-------CC--------CCCeEEEEccCC-CC--C--
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANL-------PE--------ADNLKYIAGDMF-RF--I-- 230 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a-------~~--------~~ri~~~~gD~f-~~--~-- 230 (239)
.....+|||||||+|.++..+++.+|..+++++|+ +..++.| +. .++|+++.+|-+ .+ +
T Consensus 240 l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~~~~~~~~ 319 (433)
T 1u2z_A 240 LKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFVDNNRVAE 319 (433)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCSTTCHHHHH
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCcccccccccc
Confidence 45678999999999999999999999889999999 4454444 21 268999988644 32 1
Q ss_pred --CCceEEEe
Q 046950 231 --PPADAFLF 238 (239)
Q Consensus 231 --p~~D~~~l 238 (239)
..+|+|++
T Consensus 320 ~~~~FDvIvv 329 (433)
T 1u2z_A 320 LIPQCDVILV 329 (433)
T ss_dssp HGGGCSEEEE
T ss_pred ccCCCCEEEE
Confidence 23999986
No 183
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.04 E-value=2.2e-06 Score=71.68 Aligned_cols=66 Identities=14% Similarity=0.236 Sum_probs=54.3
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----------CCCeEEEEccCCCC---CCC-ceEEE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMFRF---IPP-ADAFL 237 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----------~~ri~~~~gD~f~~---~p~-~D~~~ 237 (239)
+..++|||||||.|..+..+++..|..+++++|+ |.+++.+++ .+|++++.+|..+. .+. +|+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 4568999999999999999999888899999999 667775542 46899999998762 244 99998
Q ss_pred e
Q 046950 238 F 238 (239)
Q Consensus 238 l 238 (239)
+
T Consensus 157 ~ 157 (283)
T 2i7c_A 157 V 157 (283)
T ss_dssp E
T ss_pred E
Confidence 5
No 184
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.04 E-value=2.2e-06 Score=71.57 Aligned_cols=65 Identities=18% Similarity=0.304 Sum_probs=52.3
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCC----------------CCCCeEEEEccCCCCC--CC-
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLP----------------EADNLKYIAGDMFRFI--PP- 232 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~----------------~~~ri~~~~gD~f~~~--p~- 232 (239)
...++|||||||+|..+..+++. |..+++++|+ |.+++.++ ..+|++++.+|.++-+ +.
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~ 152 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRG 152 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCC
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcccCC
Confidence 45679999999999999999998 9899999999 66766543 2468999999976522 43
Q ss_pred ceEEEe
Q 046950 233 ADAFLF 238 (239)
Q Consensus 233 ~D~~~l 238 (239)
+|+|++
T Consensus 153 fD~Ii~ 158 (281)
T 1mjf_A 153 FDVIIA 158 (281)
T ss_dssp EEEEEE
T ss_pred eeEEEE
Confidence 999975
No 185
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=98.03 E-value=2.8e-06 Score=69.06 Aligned_cols=67 Identities=16% Similarity=0.133 Sum_probs=54.4
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCC-CCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC---C------CC-
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF---I------PP- 232 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~---~------p~- 232 (239)
..+.++|||||||+|..+..+++..| +.+++.+|. |..++.+++ .+||+++.+|.++- + +.
T Consensus 68 ~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~ 147 (237)
T 3c3y_A 68 LVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS 147 (237)
T ss_dssp HTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred hhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence 45678999999999999999999998 789999999 666665542 45899999998762 2 33
Q ss_pred ceEEEe
Q 046950 233 ADAFLF 238 (239)
Q Consensus 233 ~D~~~l 238 (239)
+|+|++
T Consensus 148 fD~I~~ 153 (237)
T 3c3y_A 148 YDFGFV 153 (237)
T ss_dssp EEEEEE
T ss_pred cCEEEE
Confidence 999985
No 186
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=98.03 E-value=9.4e-06 Score=63.82 Aligned_cols=69 Identities=16% Similarity=0.417 Sum_probs=52.4
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCCCCCeEEEEccCCCCC-----------
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYIAGDMFRFI----------- 230 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~~~ri~~~~gD~f~~~----------- 230 (239)
.+. +.+. .+.+..+|||+|||+|.++..++++ ..+++.+|+.+. ....+++++.+|+.+..
T Consensus 15 ei~-~~~~-~~~~g~~VLDlG~G~G~~s~~la~~--~~~V~gvD~~~~----~~~~~v~~~~~D~~~~~~~~~~~~~~~~ 86 (191)
T 3dou_A 15 FLL-DRYR-VVRKGDAVIEIGSSPGGWTQVLNSL--ARKIISIDLQEM----EEIAGVRFIRCDIFKETIFDDIDRALRE 86 (191)
T ss_dssp HHH-HHHC-CSCTTCEEEEESCTTCHHHHHHTTT--CSEEEEEESSCC----CCCTTCEEEECCTTSSSHHHHHHHHHHH
T ss_pred HHH-HHcC-CCCCCCEEEEEeecCCHHHHHHHHc--CCcEEEEecccc----ccCCCeEEEEccccCHHHHHHHHHHhhc
Confidence 344 4444 2456789999999999999999988 778999999653 22468999999998742
Q ss_pred ---CCceEEEe
Q 046950 231 ---PPADAFLF 238 (239)
Q Consensus 231 ---p~~D~~~l 238 (239)
..+|+|+.
T Consensus 87 ~~~~~~D~Vls 97 (191)
T 3dou_A 87 EGIEKVDDVVS 97 (191)
T ss_dssp HTCSSEEEEEE
T ss_pred ccCCcceEEec
Confidence 25898873
No 187
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=98.03 E-value=3.3e-06 Score=69.39 Aligned_cols=65 Identities=17% Similarity=0.333 Sum_probs=50.6
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCCCCC--CceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFRFIP--PADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~~~p--~~D~~~l 238 (239)
..+..+|||||||+|.++..+++..+ +++++|+ |..++.+++ .-.+++..+|+.+.+| .+|+|+.
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~g~--~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~~~~~~~~~fD~Vv~ 190 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKLGG--KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAALPFGPFDLLVA 190 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHTTC--EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHHGGGCCEEEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHhCC--eEEEEECCHHHHHHHHHHHHHcCCcEEEEECChhhcCcCCCCCEEEE
Confidence 34567999999999999999999766 9999999 666665542 1118999999877554 3999874
No 188
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=98.03 E-value=6.9e-06 Score=64.80 Aligned_cols=63 Identities=21% Similarity=0.241 Sum_probs=49.8
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCCCCCC-ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFRFIPP-ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~~~p~-~D~~~l 238 (239)
...+|||+|||+|.++..+++..+ .+++++|. |..++.++. .-+++++.+|+.+ +|. +|+|++
T Consensus 49 ~~~~vlD~g~G~G~~~~~l~~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~-~~~~~D~v~~ 118 (207)
T 1wy7_A 49 EGKVVADLGAGTGVLSYGALLLGA-KEVICVEVDKEAVDVLIENLGEFKGKFKVFIGDVSE-FNSRVDIVIM 118 (207)
T ss_dssp TTCEEEEETCTTCHHHHHHHHTTC-SEEEEEESCHHHHHHHHHHTGGGTTSEEEEESCGGG-CCCCCSEEEE
T ss_pred CcCEEEEeeCCCCHHHHHHHHcCC-CEEEEEECCHHHHHHHHHHHHHcCCCEEEEECchHH-cCCCCCEEEE
Confidence 457999999999999999998743 47999999 667666543 1179999999976 454 999885
No 189
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=98.02 E-value=1e-05 Score=64.77 Aligned_cols=67 Identities=21% Similarity=0.238 Sum_probs=53.7
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHC-----CCCeEEEeeh-HHHHhcCCC-----------CCCeEEEEccCCCCC----
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAF-----PGIKCTVLDL-PHAVANLPE-----------ADNLKYIAGDMFRFI---- 230 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~-----P~l~~~~~Dl-p~vi~~a~~-----------~~ri~~~~gD~f~~~---- 230 (239)
.....+|||||||+|.++..+++.. |+.+++.+|. |..++.+++ .++++++.+|..+..
T Consensus 78 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 157 (227)
T 2pbf_A 78 LKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEEEK 157 (227)
T ss_dssp SCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHHHH
T ss_pred CCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccccC
Confidence 3456799999999999999999987 6789999999 556665542 358999999998754
Q ss_pred C---CceEEEe
Q 046950 231 P---PADAFLF 238 (239)
Q Consensus 231 p---~~D~~~l 238 (239)
+ .+|+|+.
T Consensus 158 ~~~~~fD~I~~ 168 (227)
T 2pbf_A 158 KELGLFDAIHV 168 (227)
T ss_dssp HHHCCEEEEEE
T ss_pred ccCCCcCEEEE
Confidence 2 2899875
No 190
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.02 E-value=3.3e-06 Score=68.43 Aligned_cols=64 Identities=14% Similarity=0.228 Sum_probs=51.0
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC-CCCC--ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR-FIPP--ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~-~~p~--~D~~~l 238 (239)
...+|||||||+|.++..+++.. ..+++++|+ |.+++.+++ ..+++++.+|+.+ +.+. +|+|++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 152 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL-FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWI 152 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT-CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc-CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEE
Confidence 46799999999999999999887 568999999 667766553 2369999999866 3332 899985
No 191
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=98.01 E-value=3e-06 Score=67.06 Aligned_cols=64 Identities=19% Similarity=0.262 Sum_probs=50.0
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------C--CCeEEEEccCCCCC-----CC-ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------A--DNLKYIAGDMFRFI-----PP-ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~--~ri~~~~gD~f~~~-----p~-~D~~~l 238 (239)
...+|||+|||+|.++..+++..+ .+++.+|+ |..++.++. . ++++++.+|+.+.. .. +|+|++
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~~ 131 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSRQA-KKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQNQPHFDVVFL 131 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCCSSCCEEEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHccC-CEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhccCCCCCEEEE
Confidence 357899999999999998887644 58999999 567776653 2 68999999987622 25 899986
No 192
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=98.01 E-value=3.9e-06 Score=72.90 Aligned_cols=67 Identities=18% Similarity=0.083 Sum_probs=55.4
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
+.+..+|||+|||+|.+++.+++..+..+++++|+ |.+++.|+. .++|+++.+|+.+ +.+ . +|+|+.
T Consensus 215 ~~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~~~~~~~~~~fD~Ii~ 292 (373)
T 3tm4_A 215 ELDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQLSQYVDSVDFAIS 292 (373)
T ss_dssp TCCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCGGGGGGTCSCEEEEEE
T ss_pred cCCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhhCCcccCCcCEEEE
Confidence 35567999999999999999999998889999999 667776653 3589999999987 444 3 999875
No 193
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.00 E-value=4.9e-06 Score=69.28 Aligned_cols=69 Identities=17% Similarity=0.110 Sum_probs=52.8
Q ss_pred HhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----------CCCeEEEEccCCC-C---C
Q 046950 166 SECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMFR-F---I 230 (239)
Q Consensus 166 ~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----------~~ri~~~~gD~f~-~---~ 230 (239)
..++ ..+..+|||||||+|.++..+++..+ +++++|+ |..++.+++ ..++.+..+|+.+ + .
T Consensus 51 ~~l~--~~~~~~vLDiGcG~G~~~~~l~~~~~--~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~ 126 (293)
T 3thr_A 51 GLLR--QHGCHRVLDVACGTGVDSIMLVEEGF--SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVP 126 (293)
T ss_dssp HHHH--HTTCCEEEETTCTTSHHHHHHHHTTC--EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSC
T ss_pred HHhc--ccCCCEEEEecCCCCHHHHHHHHCCC--eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccc
Confidence 4444 34567999999999999999999844 8999999 566666532 2578899999877 3 3
Q ss_pred C-C-ceEEEe
Q 046950 231 P-P-ADAFLF 238 (239)
Q Consensus 231 p-~-~D~~~l 238 (239)
+ . +|+|++
T Consensus 127 ~~~~fD~V~~ 136 (293)
T 3thr_A 127 AGDGFDAVIC 136 (293)
T ss_dssp CTTCEEEEEE
T ss_pred cCCCeEEEEE
Confidence 4 3 999985
No 194
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.00 E-value=2.9e-06 Score=72.03 Aligned_cols=66 Identities=17% Similarity=0.187 Sum_probs=53.9
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----------CCCeEEEEccCCCC---CCC-ceEE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----------ADNLKYIAGDMFRF---IPP-ADAF 236 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----------~~ri~~~~gD~f~~---~p~-~D~~ 236 (239)
...++|||||||+|..+..+++..|..+++++|+ |.+++.+++ .+|++++.+|..+- .+. +|+|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I 155 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVV 155 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEE
Confidence 4568999999999999999999888899999999 667665542 36899999998762 233 9999
Q ss_pred Ee
Q 046950 237 LF 238 (239)
Q Consensus 237 ~l 238 (239)
++
T Consensus 156 i~ 157 (314)
T 1uir_A 156 II 157 (314)
T ss_dssp EE
T ss_pred EE
Confidence 85
No 195
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.00 E-value=1.3e-05 Score=66.67 Aligned_cols=65 Identities=15% Similarity=0.078 Sum_probs=51.6
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCC-CC-C-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFR-FI-P-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~-~~-p-~-~D~~~l 238 (239)
....+|||||||+|.++..+++. +..+++++|+ |..++.+++ ..+++++.+|+.+ +. + . +|+|++
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~ 139 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERA-GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISS 139 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHH-TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEE
T ss_pred CCCCeEEEECCCCCHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEE
Confidence 45679999999999999998776 6669999999 566665543 2579999999987 44 2 3 999985
No 196
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=97.99 E-value=8e-06 Score=77.00 Aligned_cols=66 Identities=17% Similarity=0.207 Sum_probs=53.6
Q ss_pred cCCCcEEEecCcchHHHHHHHHHC-CCCeEEEeeh-HHHHhcCCC------------CCCeEEEEccCCC-CCC-C-ceE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAF-PGIKCTVLDL-PHAVANLPE------------ADNLKYIAGDMFR-FIP-P-ADA 235 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dl-p~vi~~a~~------------~~ri~~~~gD~f~-~~p-~-~D~ 235 (239)
.+..+|||||||+|.++..+++.. |..+++++|+ +..++.|++ ..+|+++.+|+.+ +.+ . ||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 367899999999999999999998 6679999999 566665532 3579999999977 343 3 999
Q ss_pred EEe
Q 046950 236 FLF 238 (239)
Q Consensus 236 ~~l 238 (239)
|++
T Consensus 800 VV~ 802 (950)
T 3htx_A 800 GTC 802 (950)
T ss_dssp EEE
T ss_pred EEE
Confidence 975
No 197
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=97.99 E-value=7e-06 Score=64.44 Aligned_cols=60 Identities=12% Similarity=0.206 Sum_probs=48.9
Q ss_pred cEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 177 SLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
+|||||||+|.++..+++. ..+++++|. |..++.+++ ..+++++.+|+.+ +.+ . +|+|++
T Consensus 32 ~vLdiGcG~G~~~~~l~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 100 (202)
T 2kw5_A 32 KILCLAEGEGRNACFLASL--GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVS 100 (202)
T ss_dssp EEEECCCSCTHHHHHHHTT--TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEE
T ss_pred CEEEECCCCCHhHHHHHhC--CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEE
Confidence 9999999999999999986 569999999 567766653 2389999999987 444 3 899874
No 198
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=97.99 E-value=2.1e-06 Score=70.67 Aligned_cols=66 Identities=15% Similarity=0.056 Sum_probs=55.1
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCCCCC-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFRFIP-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~~~p-~-~D~~~l 238 (239)
..+.+|+|||||.|.++..+...+|..+++.+|. +..++.++. .-+.++...|+..+.| + +|++++
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~ 204 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLL 204 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEE
T ss_pred CCCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHH
Confidence 4578999999999999999999999999999999 456665542 4558999999998655 4 999964
No 199
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=97.99 E-value=4.4e-06 Score=70.42 Aligned_cols=73 Identities=16% Similarity=0.352 Sum_probs=51.5
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC-CCCC
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR-FIPP 232 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~-~~p~ 232 (239)
..++ +..+ .....+|||||||+|.++..+++. ..+++++|+ |..++.+++ .++++++.+|+.+ +.+.
T Consensus 32 ~~i~-~~~~--~~~~~~VLDiG~G~G~lt~~La~~--~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~~~~~~~ 106 (299)
T 2h1r_A 32 DKII-YAAK--IKSSDIVLEIGCGTGNLTVKLLPL--AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAIKTVFPK 106 (299)
T ss_dssp HHHH-HHHC--CCTTCEEEEECCTTSTTHHHHTTT--SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CCSSCCCC
T ss_pred HHHH-HhcC--CCCcCEEEEEcCcCcHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchhhCCccc
Confidence 4445 5444 455679999999999999999987 458999999 556665542 3689999999987 4556
Q ss_pred ceEEEe
Q 046950 233 ADAFLF 238 (239)
Q Consensus 233 ~D~~~l 238 (239)
+|+|+.
T Consensus 107 ~D~Vv~ 112 (299)
T 2h1r_A 107 FDVCTA 112 (299)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 898874
No 200
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=97.98 E-value=7.6e-06 Score=64.73 Aligned_cols=64 Identities=11% Similarity=0.161 Sum_probs=50.1
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC--CCC-C-ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR--FIP-P-ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~--~~p-~-~D~~~l 238 (239)
...+|||+|||+|.++..++++.. .+++.+|+ |..++.++. .++++++.+|+.+ +.+ . +|+|++
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~~~-~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~~~~fD~V~~ 128 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSRYA-AGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQKGTPHNIVFV 128 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHTTC-SEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSCCCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHhcCC-CEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhcCCCCCEEEE
Confidence 357999999999999999887754 38999999 667776653 2589999999876 332 3 999986
No 201
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=97.97 E-value=2.3e-06 Score=72.72 Aligned_cols=66 Identities=20% Similarity=0.288 Sum_probs=54.0
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----------CCCeEEEEccCCCC---CCC-ceEEE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----------ADNLKYIAGDMFRF---IPP-ADAFL 237 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----------~~ri~~~~gD~f~~---~p~-~D~~~ 237 (239)
...++|||||||+|..++.+++..|..+++++|+ |.+++.+++ .+|++++.+|.++. .+. +|+|+
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii 186 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVII 186 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEE
Confidence 4568999999999999999999888999999999 667765542 46899999998762 233 99998
Q ss_pred e
Q 046950 238 F 238 (239)
Q Consensus 238 l 238 (239)
+
T Consensus 187 ~ 187 (314)
T 2b2c_A 187 T 187 (314)
T ss_dssp E
T ss_pred E
Confidence 5
No 202
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=97.97 E-value=1e-05 Score=63.73 Aligned_cols=66 Identities=14% Similarity=0.078 Sum_probs=50.1
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
.....+|||||||+|.....++.. +..+++++|. |..++.++. ..+++++.+|+.+ +.| . +|+|+.
T Consensus 21 ~~~~~~vLDiGcG~G~~~~~~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 95 (209)
T 2p8j_A 21 SNLDKTVLDCGAGGDLPPLSIFVE-DGYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYS 95 (209)
T ss_dssp SSSCSEEEEESCCSSSCTHHHHHH-TTCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEE
T ss_pred cCCCCEEEEECCCCCHHHHHHHHh-CCCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEE
Confidence 345679999999999985555544 6779999999 566666553 3679999999977 454 3 899985
No 203
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=97.96 E-value=9e-06 Score=67.58 Aligned_cols=71 Identities=17% Similarity=0.162 Sum_probs=51.8
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC---CCCeEEEEccCCC-CCC---C
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE---ADNLKYIAGDMFR-FIP---P 232 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~---~~ri~~~~gD~f~-~~p---~ 232 (239)
..++ +..+ .... +|||||||+|.++..|+++. .+++++|+ +..++.+++ .++++++.+|+++ +++ .
T Consensus 37 ~~Iv-~~~~--~~~~-~VLEIG~G~G~lt~~L~~~~--~~V~avEid~~~~~~l~~~~~~~~v~vi~~D~l~~~~~~~~~ 110 (271)
T 3fut_A 37 RRIV-EAAR--PFTG-PVFEVGPGLGALTRALLEAG--AEVTAIEKDLRLRPVLEETLSGLPVRLVFQDALLYPWEEVPQ 110 (271)
T ss_dssp HHHH-HHHC--CCCS-CEEEECCTTSHHHHHHHHTT--CCEEEEESCGGGHHHHHHHTTTSSEEEEESCGGGSCGGGSCT
T ss_pred HHHH-HhcC--CCCC-eEEEEeCchHHHHHHHHHcC--CEEEEEECCHHHHHHHHHhcCCCCEEEEECChhhCChhhccC
Confidence 3445 5554 4445 99999999999999999985 57999999 445554432 4689999999987 444 3
Q ss_pred ceEEE
Q 046950 233 ADAFL 237 (239)
Q Consensus 233 ~D~~~ 237 (239)
+|.++
T Consensus 111 ~~~iv 115 (271)
T 3fut_A 111 GSLLV 115 (271)
T ss_dssp TEEEE
T ss_pred ccEEE
Confidence 56554
No 204
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=97.96 E-value=1.6e-05 Score=63.65 Aligned_cols=67 Identities=19% Similarity=0.225 Sum_probs=52.9
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHC-CCCeEEEeeh-HHHHhcCCC-----------CCCeEEEEccCCCCCC---CceE
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAF-PGIKCTVLDL-PHAVANLPE-----------ADNLKYIAGDMFRFIP---PADA 235 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dl-p~vi~~a~~-----------~~ri~~~~gD~f~~~p---~~D~ 235 (239)
.....+|||||||+|..+..+++.. |..+++.+|+ |..++.++. .++++++.+|.....+ .+|+
T Consensus 75 ~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~ 154 (226)
T 1i1n_A 75 LHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDA 154 (226)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEE
T ss_pred CCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCE
Confidence 3456799999999999999999985 7789999999 666665542 3589999999876432 3899
Q ss_pred EEe
Q 046950 236 FLF 238 (239)
Q Consensus 236 ~~l 238 (239)
|++
T Consensus 155 i~~ 157 (226)
T 1i1n_A 155 IHV 157 (226)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 205
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.96 E-value=9.4e-06 Score=67.58 Aligned_cols=66 Identities=11% Similarity=0.194 Sum_probs=50.8
Q ss_pred CCCcEEEecCcchH----HHHHHHHHCC----CCeEEEeeh-HHHHhcCCCC----------------------------
Q 046950 174 GLGSLVDVGGGNGT----FSRIISEAFP----GIKCTVLDL-PHAVANLPEA---------------------------- 216 (239)
Q Consensus 174 ~~~~vvDVGGG~G~----~~~~l~~~~P----~l~~~~~Dl-p~vi~~a~~~---------------------------- 216 (239)
+..+|+|+|||+|. +++.|++..| +.++++.|+ +.+++.|+..
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 34689999999998 6667777766 578999999 5677765420
Q ss_pred ---------CCeEEEEccCCC-CCC--C-ceEEEeC
Q 046950 217 ---------DNLKYIAGDMFR-FIP--P-ADAFLFK 239 (239)
Q Consensus 217 ---------~ri~~~~gD~f~-~~p--~-~D~~~l~ 239 (239)
++|+|..+|+++ ++| . +|+|+.+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~cr 220 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCR 220 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEEC
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEEC
Confidence 369999999998 455 3 9999863
No 206
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.95 E-value=2.4e-05 Score=60.99 Aligned_cols=63 Identities=19% Similarity=0.280 Sum_probs=50.0
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCC---------CeEEEeehHHHHhcCCCCCCeEEE-EccCCCC---------CC-
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPG---------IKCTVLDLPHAVANLPEADNLKYI-AGDMFRF---------IP- 231 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~---------l~~~~~Dlp~vi~~a~~~~ri~~~-~gD~f~~---------~p- 231 (239)
+....+|||||||+|.++..+++.+|. .+++++|+.+.. ...+++++ .+|+.+. .+
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~----~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 95 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF----PLEGATFLCPADVTDPRTSQRILEVLPG 95 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC----CCTTCEEECSCCTTSHHHHHHHHHHSGG
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc----cCCCCeEEEeccCCCHHHHHHHHHhcCC
Confidence 355679999999999999999999875 899999997631 13578999 9998762 23
Q ss_pred -CceEEEe
Q 046950 232 -PADAFLF 238 (239)
Q Consensus 232 -~~D~~~l 238 (239)
.+|+|+.
T Consensus 96 ~~fD~V~~ 103 (196)
T 2nyu_A 96 RRADVILS 103 (196)
T ss_dssp GCEEEEEE
T ss_pred CCCcEEEe
Confidence 3899874
No 207
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=97.94 E-value=8.6e-06 Score=65.41 Aligned_cols=67 Identities=18% Similarity=0.273 Sum_probs=53.2
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCC------CCeEEEeeh-HHHHhcCCC-----------CCCeEEEEccCCCCCC--
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFP------GIKCTVLDL-PHAVANLPE-----------ADNLKYIAGDMFRFIP-- 231 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P------~l~~~~~Dl-p~vi~~a~~-----------~~ri~~~~gD~f~~~p-- 231 (239)
.....+|||||||+|.++..+++..+ ..+++.+|. |..++.+++ .++++++.+|..++.|
T Consensus 82 ~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~ 161 (227)
T 1r18_A 82 LKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYPPN 161 (227)
T ss_dssp CCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCGGG
T ss_pred CCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCCcC
Confidence 34567999999999999999999765 378999998 666666543 3589999999988654
Q ss_pred -CceEEEe
Q 046950 232 -PADAFLF 238 (239)
Q Consensus 232 -~~D~~~l 238 (239)
.+|+|+.
T Consensus 162 ~~fD~I~~ 169 (227)
T 1r18_A 162 APYNAIHV 169 (227)
T ss_dssp CSEEEEEE
T ss_pred CCccEEEE
Confidence 2899875
No 208
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=97.93 E-value=2.6e-06 Score=68.98 Aligned_cols=66 Identities=18% Similarity=0.276 Sum_probs=52.8
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCC-CCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC---C------CCce
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFP-GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF---I------PPAD 234 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~---~------p~~D 234 (239)
.+..+|||||||+|..+..+++..| +.+++.+|. |..++.+++ .++|+++.+|..+. + ..+|
T Consensus 71 ~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~fD 150 (232)
T 3cbg_A 71 TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEFD 150 (232)
T ss_dssp HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCcC
Confidence 4567999999999999999999988 789999999 556665542 36899999997541 2 3389
Q ss_pred EEEe
Q 046950 235 AFLF 238 (239)
Q Consensus 235 ~~~l 238 (239)
++++
T Consensus 151 ~V~~ 154 (232)
T 3cbg_A 151 LIFI 154 (232)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 9885
No 209
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=97.91 E-value=1.3e-05 Score=70.11 Aligned_cols=76 Identities=11% Similarity=0.034 Sum_probs=57.2
Q ss_pred HHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCC--------------------------------------CeE
Q 046950 160 TTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPG--------------------------------------IKC 201 (239)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~--------------------------------------l~~ 201 (239)
+..++ .... +.+...|+|.+||+|.++++.+....+ .++
T Consensus 190 Aa~ll-~l~~--~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 266 (393)
T 3k0b_A 190 AAALV-LLTS--WHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNI 266 (393)
T ss_dssp HHHHH-HHSC--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHH-HHhC--CCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcccCCceE
Confidence 34445 4444 456789999999999999988876554 579
Q ss_pred EEeeh-HHHHhcCCC-------CCCeEEEEccCCCC-CCC-ceEEEe
Q 046950 202 TVLDL-PHAVANLPE-------ADNLKYIAGDMFRF-IPP-ADAFLF 238 (239)
Q Consensus 202 ~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~-~p~-~D~~~l 238 (239)
+.+|. |.+++.|+. .++|+++.+|+++- .+. +|+|++
T Consensus 267 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~ 313 (393)
T 3k0b_A 267 IGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVA 313 (393)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEE
Confidence 99999 667776552 45799999999883 344 999875
No 210
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=97.90 E-value=1.1e-05 Score=70.38 Aligned_cols=76 Identities=16% Similarity=0.114 Sum_probs=57.2
Q ss_pred HHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCC--------------------------------------CeE
Q 046950 160 TTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPG--------------------------------------IKC 201 (239)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~--------------------------------------l~~ 201 (239)
+..++ .... +.+..+|+|++||+|.++++++....+ .++
T Consensus 184 Aa~ll-~~~~--~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~V 260 (385)
T 3ldu_A 184 AAGLI-YLTP--WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNESKFKI 260 (385)
T ss_dssp HHHHH-HTSC--CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCSCCCCE
T ss_pred HHHHH-HhhC--CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhccCCceE
Confidence 34445 4444 456689999999999999998876433 579
Q ss_pred EEeeh-HHHHhcCCC-------CCCeEEEEccCCCC-CCC-ceEEEe
Q 046950 202 TVLDL-PHAVANLPE-------ADNLKYIAGDMFRF-IPP-ADAFLF 238 (239)
Q Consensus 202 ~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~-~p~-~D~~~l 238 (239)
+++|+ |.+++.|+. .++|++..+|+++- .|. +|+|++
T Consensus 261 ~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~ 307 (385)
T 3ldu_A 261 YGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIIT 307 (385)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEE
Confidence 99999 667777653 35799999999883 344 899885
No 211
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=97.87 E-value=1.9e-05 Score=64.43 Aligned_cols=66 Identities=14% Similarity=0.362 Sum_probs=50.6
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----CCCeEEEEccCCC-CCC
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMFR-FIP 231 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----~~ri~~~~gD~f~-~~p 231 (239)
..++ +..+ .....+|||||||+|.++..++++. .+++++|+ +..++.+++ .++++++.+|+.+ +.+
T Consensus 20 ~~i~-~~~~--~~~~~~VLDiG~G~G~lt~~l~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~ 91 (244)
T 1qam_A 20 DKIM-TNIR--LNEHDNIFEIGSGKGHFTLELVQRC--NFVTAIEIDHKLCKTTENKLVDHDNFQVLNKDILQFKFP 91 (244)
T ss_dssp HHHH-TTCC--CCTTCEEEEECCTTSHHHHHHHHHS--SEEEEECSCHHHHHHHHHHTTTCCSEEEECCCGGGCCCC
T ss_pred HHHH-HhCC--CCCCCEEEEEeCCchHHHHHHHHcC--CeEEEEECCHHHHHHHHHhhccCCCeEEEEChHHhCCcc
Confidence 3445 5444 4456799999999999999999986 68999999 556655442 4689999999987 555
No 212
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=97.87 E-value=2.1e-05 Score=68.56 Aligned_cols=76 Identities=13% Similarity=0.062 Sum_probs=57.4
Q ss_pred HHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCC--------------------------------------CeE
Q 046950 160 TTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPG--------------------------------------IKC 201 (239)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~--------------------------------------l~~ 201 (239)
+..++ .... +.+...|+|.+||+|.++++.+....+ .++
T Consensus 183 Aaall-~l~~--~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~~~~~v 259 (384)
T 3ldg_A 183 AAAII-LLSN--WFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADYDIQLDI 259 (384)
T ss_dssp HHHHH-HHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCTTCCCCE
T ss_pred HHHHH-HHhC--CCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhccCCceE
Confidence 44455 5444 556789999999999999998876554 569
Q ss_pred EEeeh-HHHHhcCCC-------CCCeEEEEccCCC-CCCC-ceEEEe
Q 046950 202 TVLDL-PHAVANLPE-------ADNLKYIAGDMFR-FIPP-ADAFLF 238 (239)
Q Consensus 202 ~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~-~~p~-~D~~~l 238 (239)
+++|. |.+++.|+. .++|+++.+|+++ +.+. +|+|++
T Consensus 260 ~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~ 306 (384)
T 3ldg_A 260 SGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLIS 306 (384)
T ss_dssp EEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEE
T ss_pred EEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEE
Confidence 99999 667766552 5679999999988 3344 899875
No 213
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=97.86 E-value=2.1e-05 Score=69.59 Aligned_cols=65 Identities=14% Similarity=0.194 Sum_probs=52.0
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCCCC-------CceEEE
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRFIP-------PADAFL 237 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~~p-------~~D~~~ 237 (239)
..+..+|+|+|||+|.++..+++. ..+++.+|. |+.++.|+. .++++++.+|+++.++ .+|+|+
T Consensus 284 ~~~~~~VLDlgcG~G~~~~~la~~--~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~fD~Vv 361 (433)
T 1uwv_A 284 VQPEDRVLDLFCGMGNFTLPLATQ--AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNGFDKVL 361 (433)
T ss_dssp CCTTCEEEEESCTTTTTHHHHHTT--SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTCCSEEE
T ss_pred CCCCCEEEECCCCCCHHHHHHHhh--CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCCCCEEE
Confidence 345679999999999999999987 678999999 667776652 3489999999988432 289988
Q ss_pred e
Q 046950 238 F 238 (239)
Q Consensus 238 l 238 (239)
+
T Consensus 362 ~ 362 (433)
T 1uwv_A 362 L 362 (433)
T ss_dssp E
T ss_pred E
Confidence 5
No 214
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=97.84 E-value=1.3e-05 Score=65.99 Aligned_cols=63 Identities=19% Similarity=0.325 Sum_probs=49.4
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----CCCeEEEEccCCC
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMFR 228 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----~~ri~~~~gD~f~ 228 (239)
..++ +..+ .....+|||||||+|.++..|+++. .+++++|+ +..++.+++ .++++++.+|+++
T Consensus 19 ~~iv-~~~~--~~~~~~VLEIG~G~G~lt~~La~~~--~~V~avEid~~~~~~~~~~~~~~~~v~~i~~D~~~ 86 (255)
T 3tqs_A 19 QKIV-SAIH--PQKTDTLVEIGPGRGALTDYLLTEC--DNLALVEIDRDLVAFLQKKYNQQKNITIYQNDALQ 86 (255)
T ss_dssp HHHH-HHHC--CCTTCEEEEECCTTTTTHHHHTTTS--SEEEEEECCHHHHHHHHHHHTTCTTEEEEESCTTT
T ss_pred HHHH-HhcC--CCCcCEEEEEcccccHHHHHHHHhC--CEEEEEECCHHHHHHHHHHHhhCCCcEEEEcchHh
Confidence 3455 5554 4556799999999999999999875 68999999 556665543 4789999999987
No 215
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=97.83 E-value=3.1e-05 Score=67.47 Aligned_cols=63 Identities=16% Similarity=0.198 Sum_probs=50.9
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCCC-CC-C-ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFRF-IP-P-ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~~-~p-~-~D~~~l 238 (239)
...+|||||||+|.++..+++. ..+++.+|. +..++.++. .-+++++.+|+++. .+ . +|+|++
T Consensus 233 ~~~~VLDlGcG~G~~~~~la~~--g~~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~ 304 (381)
T 3dmg_A 233 RGRQVLDLGAGYGALTLPLARM--GAEVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVT 304 (381)
T ss_dssp TTCEEEEETCTTSTTHHHHHHT--TCEEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEE
T ss_pred CCCEEEEEeeeCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEE
Confidence 4579999999999999999997 569999999 667776653 23589999999884 33 3 999986
No 216
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.81 E-value=2.8e-05 Score=65.17 Aligned_cols=67 Identities=16% Similarity=0.258 Sum_probs=56.0
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----------CCCeEEEEccCCCC---CCC-ceE
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----------ADNLKYIAGDMFRF---IPP-ADA 235 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----------~~ri~~~~gD~f~~---~p~-~D~ 235 (239)
.+.+++||=||||.|..++++++..|..+++++|+ |.|++.+++ .+|++++.+|-++- -+. +|+
T Consensus 81 ~p~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDv 160 (294)
T 3o4f_A 81 HGHAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDV 160 (294)
T ss_dssp SSCCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEE
T ss_pred CCCCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCE
Confidence 45689999999999999999999888889999999 778876542 67999999998873 223 999
Q ss_pred EEe
Q 046950 236 FLF 238 (239)
Q Consensus 236 ~~l 238 (239)
|++
T Consensus 161 Ii~ 163 (294)
T 3o4f_A 161 IIS 163 (294)
T ss_dssp EEE
T ss_pred EEE
Confidence 985
No 217
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=97.81 E-value=1.8e-05 Score=62.46 Aligned_cols=60 Identities=20% Similarity=0.171 Sum_probs=47.7
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCC-eEEEeeh-HHHHhcCCC-CCCeEEEEccCCC-CCCC--ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGI-KCTVLDL-PHAVANLPE-ADNLKYIAGDMFR-FIPP--ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l-~~~~~Dl-p~vi~~a~~-~~ri~~~~gD~f~-~~p~--~D~~~l 238 (239)
...+|||||||+|.++..+ .. +++++|. |..++.+++ ..+++++.+|+.+ +.+. +|+|++
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 101 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRAPEATWVRAWGEALPFPGESFDVVLL 101 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHCTTSEEECCCTTSCCSCSSCEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccccCCCCCCcEEEEEE
Confidence 5679999999999999887 45 8999999 566666553 3689999999876 4443 899985
No 218
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.80 E-value=2.6e-05 Score=63.83 Aligned_cols=64 Identities=20% Similarity=0.324 Sum_probs=48.3
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
....+|||||||+|.++..+++. ..+++++|. |..++.++....-.++.+|+.+ +.+ . +|+|++
T Consensus 53 ~~~~~vLDiGcG~G~~~~~l~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~d~~~~~~~~~~fD~v~~ 120 (260)
T 2avn_A 53 KNPCRVLDLGGGTGKWSLFLQER--GFEVVLVDPSKEMLEVAREKGVKNVVEAKAEDLPFPSGAFEAVLA 120 (260)
T ss_dssp CSCCEEEEETCTTCHHHHHHHTT--TCEEEEEESCHHHHHHHHHHTCSCEEECCTTSCCSCTTCEEEEEE
T ss_pred CCCCeEEEeCCCcCHHHHHHHHc--CCeEEEEeCCHHHHHHHHhhcCCCEEECcHHHCCCCCCCEEEEEE
Confidence 35679999999999999999987 568999999 6677666531111388899876 454 3 899875
No 219
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=97.80 E-value=2.8e-05 Score=63.80 Aligned_cols=67 Identities=27% Similarity=0.424 Sum_probs=51.4
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC--CCCeEEEEccCCC-CCC
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE--ADNLKYIAGDMFR-FIP 231 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~--~~ri~~~~gD~f~-~~p 231 (239)
..++ +..+ .....+|||||||+|.++..+++. +..+++++|+ +..++.+++ ..+++++.+|+.+ +++
T Consensus 21 ~~iv-~~~~--~~~~~~VLDiG~G~G~lt~~L~~~-~~~~v~avEid~~~~~~~~~~~~~~v~~i~~D~~~~~~~ 91 (249)
T 3ftd_A 21 KKIA-EELN--IEEGNTVVEVGGGTGNLTKVLLQH-PLKKLYVIELDREMVENLKSIGDERLEVINEDASKFPFC 91 (249)
T ss_dssp HHHH-HHTT--CCTTCEEEEEESCHHHHHHHHTTS-CCSEEEEECCCHHHHHHHTTSCCTTEEEECSCTTTCCGG
T ss_pred HHHH-HhcC--CCCcCEEEEEcCchHHHHHHHHHc-CCCeEEEEECCHHHHHHHHhccCCCeEEEEcchhhCChh
Confidence 3445 5544 445679999999999999999987 5678999999 556665553 4679999999987 444
No 220
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.79 E-value=1.4e-05 Score=66.12 Aligned_cols=50 Identities=16% Similarity=0.133 Sum_probs=38.9
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE 215 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~ 215 (239)
..++ +.++ .....+|||||||+|.++..++++ ..+++++|+ |..++.+++
T Consensus 35 ~~il-~~l~--l~~g~~VLDlGcGtG~~a~~La~~--g~~V~gvD~S~~ml~~Ar~ 85 (261)
T 3iv6_A 35 ENDI-FLEN--IVPGSTVAVIGASTRFLIEKALER--GASVTVFDFSQRMCDDLAE 85 (261)
T ss_dssp HHHH-HTTT--CCTTCEEEEECTTCHHHHHHHHHT--TCEEEEEESCHHHHHHHHH
T ss_pred HHHH-HhcC--CCCcCEEEEEeCcchHHHHHHHhc--CCEEEEEECCHHHHHHHHH
Confidence 4455 5554 556789999999999999999987 468999999 567776653
No 221
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=97.79 E-value=1.8e-05 Score=66.01 Aligned_cols=66 Identities=24% Similarity=0.165 Sum_probs=53.1
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCC--CceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIP--PADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p--~~D~~~l 238 (239)
.....+|||+|||+|.+++.+++. +..+++.+|+ |..++.+++ .++|+++.+|.++-.+ .||.|+|
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~-g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~ 198 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY-GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILM 198 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH-TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh-cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEE
Confidence 355789999999999999999886 5578999999 666665542 7889999999987433 3998886
No 222
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=97.77 E-value=1e-05 Score=67.52 Aligned_cols=67 Identities=18% Similarity=0.273 Sum_probs=51.6
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCC--CeEEEeeh-HHHHhcCCC--CCCeEEEEccCCC-CCC
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPG--IKCTVLDL-PHAVANLPE--ADNLKYIAGDMFR-FIP 231 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~--l~~~~~Dl-p~vi~~a~~--~~ri~~~~gD~f~-~~p 231 (239)
.++ +..+ .....+|||||||+|.++..|+++.+. .+++++|+ +..++.+++ .++++++.+|+++ +++
T Consensus 33 ~iv-~~~~--~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~~~~v~~i~~D~~~~~~~ 105 (279)
T 3uzu_A 33 AIV-AAIR--PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRFGELLELHAGDALTFDFG 105 (279)
T ss_dssp HHH-HHHC--CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHHGGGEEEEESCGGGCCGG
T ss_pred HHH-HhcC--CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhcCCCcEEEECChhcCChh
Confidence 345 5544 455679999999999999999998764 66999999 556666553 4689999999987 443
No 223
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.77 E-value=3.8e-05 Score=61.16 Aligned_cols=57 Identities=16% Similarity=0.153 Sum_probs=45.7
Q ss_pred CCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 175 LGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
..+|||||||+|.++..+++. +++|. +..++.++.. +++++.+|+.+ +.+ . +|+|++
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~------~~vD~s~~~~~~a~~~-~~~~~~~d~~~~~~~~~~fD~v~~ 108 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK------IGVEPSERMAEIARKR-GVFVLKGTAENLPLKDESFDFALM 108 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC------EEEESCHHHHHHHHHT-TCEEEECBTTBCCSCTTCEEEEEE
T ss_pred CCcEEEeCCCCCHHHHHHHHH------hccCCCHHHHHHHHhc-CCEEEEcccccCCCCCCCeeEEEE
Confidence 779999999999999988765 89999 6666666533 79999999866 444 2 899985
No 224
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=97.76 E-value=5.8e-05 Score=59.71 Aligned_cols=53 Identities=19% Similarity=0.239 Sum_probs=42.4
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCCCCCeEEEEccCCC-CCC-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYIAGDMFR-FIP-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~~~ri~~~~gD~f~-~~p-~-~D~~~l 238 (239)
....+|||||||+|.++..+. .+++++|..+. +++++.+|+.+ +.+ . +|+|++
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~-----~~v~~~D~s~~--------~~~~~~~d~~~~~~~~~~fD~v~~ 121 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR-----NPVHCFDLASL--------DPRVTVCDMAQVPLEDESVDVAVF 121 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC-----SCEEEEESSCS--------STTEEESCTTSCSCCTTCEEEEEE
T ss_pred CCCCeEEEECCcCCHHHHHhh-----ccEEEEeCCCC--------CceEEEeccccCCCCCCCEeEEEE
Confidence 456799999999999998883 67999998654 57889999877 454 3 899975
No 225
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=97.75 E-value=3.3e-05 Score=65.50 Aligned_cols=67 Identities=9% Similarity=0.073 Sum_probs=52.5
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCC-CCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCC--CCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFP-GIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRF--IPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~--~p~-~D~~~l 238 (239)
.....+|||+|||+|..+..+++..+ ..+++.+|+ +..++.+++ ..+|+++.+|+.+. .+. +|+|++
T Consensus 116 ~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~ 193 (315)
T 1ixk_A 116 PKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILL 193 (315)
T ss_dssp CCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEE
Confidence 44567999999999999999999975 589999999 555655542 34799999998762 233 999985
No 226
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=97.65 E-value=0.00011 Score=59.58 Aligned_cols=67 Identities=13% Similarity=0.096 Sum_probs=51.4
Q ss_pred hcCCCcEEEecCcchHHHHHHHHH-CCCCeEEEeeh-HHH----HhcCCCCCCeEEEEccCCCC-----CCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEA-FPGIKCTVLDL-PHA----VANLPEADNLKYIAGDMFRF-----IPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~~~Dl-p~v----i~~a~~~~ri~~~~gD~f~~-----~p~-~D~~~l 238 (239)
+.+..+|||||||+|.++..+++. .|+-+++.+|+ |.. ++.++...+|+++.+|...+ .+. +|+|+.
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r~nv~~i~~Da~~~~~~~~~~~~~D~I~~ 152 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRRPNIFPLLADARFPQSYKSVVENVDVLYV 152 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHCTTEEEEECCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhcCCeEEEEcccccchhhhccccceEEEEe
Confidence 456789999999999999999886 47889999999 433 33333356899999998763 233 899875
No 227
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=97.65 E-value=2.8e-05 Score=64.35 Aligned_cols=64 Identities=19% Similarity=0.157 Sum_probs=47.5
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC--CC------CeEEE--EccCCCCCCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE--AD------NLKYI--AGDMFRFIPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~--~~------ri~~~--~gD~f~~~p~-~D~~~l 238 (239)
+....+|||||||+|.++..+++. -+++.+|+.+.+..+.+ .. +|+++ .+|+.+--+. +|+|+.
T Consensus 72 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gvD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~V~s 146 (265)
T 2oxt_A 72 VELTGRVVDLGCGRGGWSYYAASR---PHVMDVRAYTLGVGGHEVPRITESYGWNIVKFKSRVDIHTLPVERTDVIMC 146 (265)
T ss_dssp CCCCEEEEEESCTTSHHHHHHHTS---TTEEEEEEECCCCSSCCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHc---CcEEEEECchhhhhhhhhhhhhhccCCCeEEEecccCHhHCCCCCCcEEEE
Confidence 445679999999999999998887 68999999665333321 11 68999 8999762233 999875
No 228
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=97.63 E-value=2.3e-05 Score=63.90 Aligned_cols=66 Identities=15% Similarity=0.362 Sum_probs=51.4
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----CCCeEEEEccCCC-CCC
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMFR-FIP 231 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----~~ri~~~~gD~f~-~~p 231 (239)
..++ +..+ .....+|||||||+|.++..+++.. .+++++|+ +..++.+++ .++++++.+|+.+ +.+
T Consensus 19 ~~i~-~~~~--~~~~~~VLDiG~G~G~~~~~l~~~~--~~v~~id~~~~~~~~a~~~~~~~~~v~~~~~D~~~~~~~ 90 (245)
T 1yub_A 19 NQII-KQLN--LKETDTVYEIGTGKGHLTTKLAKIS--KQVTSIELDSHLFNLSSEKLKLNTRVTLIHQDILQFQFP 90 (245)
T ss_dssp HHHH-HHCC--CCSSEEEEECSCCCSSCSHHHHHHS--SEEEESSSSCSSSSSSSCTTTTCSEEEECCSCCTTTTCC
T ss_pred HHHH-HhcC--CCCCCEEEEEeCCCCHHHHHHHHhC--CeEEEEECCHHHHHHHHHHhccCCceEEEECChhhcCcc
Confidence 4455 5554 4556799999999999999999985 78999999 556666654 3589999999987 444
No 229
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=97.63 E-value=2.5e-05 Score=65.08 Aligned_cols=64 Identities=25% Similarity=0.242 Sum_probs=47.5
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC--CC------CeEEE--EccCCCCCCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE--AD------NLKYI--AGDMFRFIPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~--~~------ri~~~--~gD~f~~~p~-~D~~~l 238 (239)
+.+..+|||||||+|.++..+++. -+++.+|+.+.+..+.+ .. +|+++ .+|+.+-.+. +|+|+.
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~---~~V~gVD~s~m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~~~~fD~Vvs 154 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ---PNVREVKAYTLGTSGHEKPRLVETFGWNLITFKSKVDVTKMEPFQADTVLC 154 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS---TTEEEEEEECCCCTTSCCCCCCCCTTGGGEEEECSCCGGGCCCCCCSEEEE
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc---CCEEEEECchhhhhhhhchhhhhhcCCCeEEEeccCcHhhCCCCCcCEEEE
Confidence 445679999999999999999887 58999999664333321 11 68999 9998662133 999875
No 230
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=97.63 E-value=1.3e-05 Score=65.43 Aligned_cols=64 Identities=19% Similarity=0.224 Sum_probs=49.0
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----CC-------------------------------
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----AD------------------------------- 217 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----~~------------------------------- 217 (239)
...+|||||||+|.++..+++..+ .+++++|. |..++.+++ ..
T Consensus 56 ~~~~vLDlGcG~G~~~~~l~~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 134 (265)
T 2i62_A 56 KGELLIDIGSGPTIYQLLSACESF-TEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKLRR 134 (265)
T ss_dssp CEEEEEEESCTTCCGGGTTGGGTE-EEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHHHH
T ss_pred CCCEEEEECCCccHHHHHHhhccc-CeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHhhh
Confidence 457899999999999999988776 68999999 556665532 11
Q ss_pred Ce-EEEEccCCCCC---C---C-ceEEEe
Q 046950 218 NL-KYIAGDMFRFI---P---P-ADAFLF 238 (239)
Q Consensus 218 ri-~~~~gD~f~~~---p---~-~D~~~l 238 (239)
+| +++.+|+.+.. + . +|+|++
T Consensus 135 ~v~~~~~~d~~~~~~~~~~~~~~fD~v~~ 163 (265)
T 2i62_A 135 AIKQVLKCDVTQSQPLGGVSLPPADCLLS 163 (265)
T ss_dssp HEEEEEECCTTSSSTTTTCCCCCEEEEEE
T ss_pred hheeEEEeeeccCCCCCccccCCccEEEE
Confidence 28 99999998732 2 3 899985
No 231
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=97.62 E-value=3.5e-05 Score=63.90 Aligned_cols=67 Identities=13% Similarity=0.123 Sum_probs=52.3
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCC-CeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCC-C-----CC-ceEE
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPG-IKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRF-I-----PP-ADAF 236 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~-l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~-~-----p~-~D~~ 236 (239)
.....+|||+|||+|..+..+++..++ .+++.+|. +..++.+++ ..+++++.+|+.+. . +. +|+|
T Consensus 81 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~V 160 (274)
T 3ajd_A 81 PREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKI 160 (274)
T ss_dssp CCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEE
Confidence 345679999999999999999999887 89999999 445554432 34899999998662 1 33 8998
Q ss_pred Ee
Q 046950 237 LF 238 (239)
Q Consensus 237 ~l 238 (239)
++
T Consensus 161 l~ 162 (274)
T 3ajd_A 161 LL 162 (274)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 232
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=97.62 E-value=1.8e-05 Score=65.23 Aligned_cols=64 Identities=16% Similarity=0.232 Sum_probs=49.6
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-H-------HHHhcCCC-------CCCeEEEEccCCCC---CC---
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-P-------HAVANLPE-------ADNLKYIAGDMFRF---IP--- 231 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p-------~vi~~a~~-------~~ri~~~~gD~f~~---~p--- 231 (239)
....+|||+|||+|.++..+++. ..+++.+|+ | ..++.++. .+||+++.+|..+- ++
T Consensus 82 ~~~~~VLDlgcG~G~~a~~lA~~--g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~ 159 (258)
T 2r6z_A 82 TAHPTVWDATAGLGRDSFVLASL--GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQ 159 (258)
T ss_dssp GGCCCEEETTCTTCHHHHHHHHT--TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcCeEEEeeCccCHHHHHHHHh--CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccC
Confidence 44579999999999999999996 568999999 5 44554432 36799999998762 33
Q ss_pred -CceEEEe
Q 046950 232 -PADAFLF 238 (239)
Q Consensus 232 -~~D~~~l 238 (239)
.+|+|++
T Consensus 160 ~~fD~V~~ 167 (258)
T 2r6z_A 160 GKPDIVYL 167 (258)
T ss_dssp CCCSEEEE
T ss_pred CCccEEEE
Confidence 3899886
No 233
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=97.62 E-value=0.00011 Score=61.15 Aligned_cols=65 Identities=15% Similarity=0.134 Sum_probs=46.6
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh--HHHHhcCCC------------C----CCeEEEEccCCCC---C-
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL--PHAVANLPE------------A----DNLKYIAGDMFRF---I- 230 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl--p~vi~~a~~------------~----~ri~~~~gD~f~~---~- 230 (239)
....+|||||||+|.++..+++. ...+++.+|+ |.+++.++. . ++|+++..|.-+. +
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~-~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 156 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLA-GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQ 156 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHT-TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHH
Confidence 34679999999999999988885 3458999999 566654431 1 4788887665432 2
Q ss_pred ----C-CceEEEe
Q 046950 231 ----P-PADAFLF 238 (239)
Q Consensus 231 ----p-~~D~~~l 238 (239)
+ .+|+|++
T Consensus 157 ~~~~~~~fD~Ii~ 169 (281)
T 3bzb_A 157 RCTGLQRFQVVLL 169 (281)
T ss_dssp HHHSCSSBSEEEE
T ss_pred hhccCCCCCEEEE
Confidence 2 3899875
No 234
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=97.62 E-value=4.2e-05 Score=65.49 Aligned_cols=65 Identities=9% Similarity=0.100 Sum_probs=52.5
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCC-----CeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCCCCC-C-ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPG-----IKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFRFIP-P-ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~-----l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~~~p-~-~D~~~l 238 (239)
...+|+|+|||+|.++..+++..|. .+++++|+ |..++.|+. ..+++++.+|.+++.+ . +|+|+.
T Consensus 130 ~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~~~~i~~~D~l~~~~~~~fD~Ii~ 207 (344)
T 2f8l_A 130 KNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQKMTLLHQDGLANLLVDPVDVVIS 207 (344)
T ss_dssp SEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCTTSCCCCCCEEEEEE
T ss_pred CCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCCCceEEECCCCCccccCCccEEEE
Confidence 4569999999999999999998875 78999999 566665542 2368999999998765 3 999874
No 235
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=97.61 E-value=5e-05 Score=64.93 Aligned_cols=63 Identities=22% Similarity=0.276 Sum_probs=51.5
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCCCCceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFIPPADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~p~~D~~~l 238 (239)
....+|||+|||+|.++.. ++ +..+++.+|+ |..++.++. .++++++.+|.++....+|+|++
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~--~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~~~fD~Vi~ 264 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK--NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVDVKGNRVIM 264 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT--TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCCCCEEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhcCCCcEEEE
Confidence 4567999999999999999 76 5778999999 667776552 36899999999885544999986
No 236
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=97.61 E-value=4.4e-05 Score=64.49 Aligned_cols=64 Identities=23% Similarity=0.372 Sum_probs=47.4
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-----HHHHhcCC--C--CCCeEEEEc-cCCCCCC-CceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-----PHAVANLP--E--ADNLKYIAG-DMFRFIP-PADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-----p~vi~~a~--~--~~ri~~~~g-D~f~~~p-~~D~~~l 238 (239)
+.+..+|||||||+|.++..++++ -+++.+|+ +..++... . .++|+++.+ |+++..+ .+|+|+.
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~---~~V~gvD~~~~~~~~~~~~~~~~~~~~~~v~~~~~~D~~~l~~~~fD~V~s 154 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL---KNVREVKGLTKGGPGHEEPIPMSTYGWNLVRLQSGVDVFFIPPERCDTLLC 154 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS---TTEEEEEEECCCSTTSCCCCCCCSTTGGGEEEECSCCTTTSCCCCCSEEEE
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc---CCEEEEeccccCchhHHHHHHhhhcCCCCeEEEeccccccCCcCCCCEEEE
Confidence 445679999999999999999887 37889998 53333222 1 257999999 9976323 3999874
No 237
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=97.59 E-value=4.7e-05 Score=62.53 Aligned_cols=63 Identities=19% Similarity=0.189 Sum_probs=47.0
Q ss_pred HHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----CCCeEEEEccCCC
Q 046950 161 TFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----ADNLKYIAGDMFR 228 (239)
Q Consensus 161 ~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----~~ri~~~~gD~f~ 228 (239)
..++ +... .....+|||||||+|.++. +. +.+..+++++|+ |..++.+++ .++++++.+|+.+
T Consensus 11 ~~iv-~~~~--~~~~~~VLEIG~G~G~lt~-l~-~~~~~~v~avEid~~~~~~a~~~~~~~~~v~~i~~D~~~ 78 (252)
T 1qyr_A 11 DSIV-SAIN--PQKGQAMVEIGPGLAALTE-PV-GERLDQLTVIELDRDLAARLQTHPFLGPKLTIYQQDAMT 78 (252)
T ss_dssp HHHH-HHHC--CCTTCCEEEECCTTTTTHH-HH-HTTCSCEEEECCCHHHHHHHHTCTTTGGGEEEECSCGGG
T ss_pred HHHH-HhcC--CCCcCEEEEECCCCcHHHH-hh-hCCCCeEEEEECCHHHHHHHHHHhccCCceEEEECchhh
Confidence 3455 5544 4556789999999999999 64 455555999999 667666553 2589999999977
No 238
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.58 E-value=7.4e-05 Score=60.60 Aligned_cols=67 Identities=18% Similarity=0.176 Sum_probs=52.5
Q ss_pred hcCCCcEEEecCcchHHHHHHHHH-CCCCeEEEeeh-HHHHhcC----CCCCCeEEEEccCCCC----CC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEA-FPGIKCTVLDL-PHAVANL----PEADNLKYIAGDMFRF----IP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~~~Dl-p~vi~~a----~~~~ri~~~~gD~f~~----~p-~-~D~~~l 238 (239)
+++..+|||||||+|.++..+++. -|+=+++.+|. |+.++.+ ....++..+.+|...+ .+ . +|++++
T Consensus 75 ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~ 153 (233)
T 4df3_A 75 VKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYA 153 (233)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEE
Confidence 567789999999999999999997 49999999999 5555544 3466799999988663 11 2 788764
No 239
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=97.57 E-value=0.00011 Score=64.86 Aligned_cols=63 Identities=16% Similarity=0.198 Sum_probs=51.3
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCCCCC-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRFIPP-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~~p~-~D~~~l 238 (239)
.+..+|+|+|||+|.++..+++. ..+++.+|. |+.++.|+. .+ ++++.+|+++-.+. +|++++
T Consensus 289 ~~~~~VLDlgcG~G~~sl~la~~--~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~~fD~Vv~ 359 (425)
T 2jjq_A 289 VEGEKILDMYSGVGTFGIYLAKR--GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVKGFDTVIV 359 (425)
T ss_dssp CCSSEEEEETCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCTTCSEEEE
T ss_pred CCCCEEEEeeccchHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCccCCCEEEE
Confidence 45679999999999999999986 458999999 667776653 23 99999999886554 999886
No 240
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=97.57 E-value=7.8e-05 Score=68.26 Aligned_cols=65 Identities=14% Similarity=0.159 Sum_probs=50.3
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----C--CCeEEEEccCCC---CC-CC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----A--DNLKYIAGDMFR---FI-PP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----~--~ri~~~~gD~f~---~~-p~-~D~~~l 238 (239)
+.++-+|||||||.|.++..|++. ..+++++|. +..|+.|+. . -.|++..++.-+ +. +. ||+|+.
T Consensus 64 ~~~~~~vLDvGCG~G~~~~~la~~--ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~ 140 (569)
T 4azs_A 64 LGRPLNVLDLGCAQGFFSLSLASK--GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIG 140 (569)
T ss_dssp HTSCCEEEEETCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHhC--CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEE
Confidence 445679999999999999999997 778999999 557776652 2 358999998744 33 33 999874
No 241
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=97.57 E-value=3.2e-05 Score=66.13 Aligned_cols=63 Identities=22% Similarity=0.266 Sum_probs=49.9
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CC-CeEEEEccCCCCC------C-CceEEE
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------AD-NLKYIAGDMFRFI------P-PADAFL 237 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~-ri~~~~gD~f~~~------p-~~D~~~ 237 (239)
...+|||+|||+|.++..+++... +++.+|+ |..++.+++ .+ +++++.+|+++.. . .+|+|+
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga--~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii 230 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA--EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIIL 230 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC--EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC--EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEE
Confidence 356999999999999999999644 9999999 667766552 33 5999999998732 2 399998
Q ss_pred e
Q 046950 238 F 238 (239)
Q Consensus 238 l 238 (239)
+
T Consensus 231 ~ 231 (332)
T 2igt_A 231 T 231 (332)
T ss_dssp E
T ss_pred E
Confidence 6
No 242
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=97.56 E-value=4.8e-05 Score=65.52 Aligned_cols=65 Identities=15% Similarity=0.201 Sum_probs=52.0
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC----------C----CCeEEEEccCCCCC------C
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE----------A----DNLKYIAGDMFRFI------P 231 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~----------~----~ri~~~~gD~f~~~------p 231 (239)
+.+++|||||||.|..++++++..| .+++++|+ |.|++.+++ . +|++++.+|.++-+ +
T Consensus 187 p~pkrVL~IGgG~G~~arellk~~~-~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 187 YTGKDVLILGGGDGGILCEIVKLKP-KMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCC-SEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCCEEEEEECChhHHHHHHHHCCC-CEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 4578999999999999999998765 78999999 677776542 1 28999999988721 2
Q ss_pred C-ceEEEe
Q 046950 232 P-ADAFLF 238 (239)
Q Consensus 232 ~-~D~~~l 238 (239)
. ||+|++
T Consensus 266 ~~fDvII~ 273 (364)
T 2qfm_A 266 REFDYVIN 273 (364)
T ss_dssp CCEEEEEE
T ss_pred CCceEEEE
Confidence 3 999985
No 243
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=97.49 E-value=0.00026 Score=58.76 Aligned_cols=56 Identities=20% Similarity=0.386 Sum_probs=44.5
Q ss_pred cCCCcEEEecCcc---hHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC
Q 046950 173 EGLGSLVDVGGGN---GTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR 228 (239)
Q Consensus 173 ~~~~~vvDVGGG~---G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~ 228 (239)
.+..+|||||||. |.....+.+.+|+.+++.+|. |.+++.++. ..+++++.+|+.+
T Consensus 77 ~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~ 142 (277)
T 3giw_A 77 AGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLD 142 (277)
T ss_dssp SCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTC
T ss_pred cCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccC
Confidence 3678999999997 333444455689999999999 889998874 2479999999977
No 244
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=97.47 E-value=0.00016 Score=63.12 Aligned_cols=63 Identities=21% Similarity=0.166 Sum_probs=46.5
Q ss_pred CCCcEEEecCc------chHHHHHHHH-HCCCCeEEEeehHHHHhcCCCCCCeEEEEccCCC-CCC--------CceEEE
Q 046950 174 GLGSLVDVGGG------NGTFSRIISE-AFPGIKCTVLDLPHAVANLPEADNLKYIAGDMFR-FIP--------PADAFL 237 (239)
Q Consensus 174 ~~~~vvDVGGG------~G~~~~~l~~-~~P~l~~~~~Dlp~vi~~a~~~~ri~~~~gD~f~-~~p--------~~D~~~ 237 (239)
...+||||||| +|..+..+++ .+|+.+++.+|+.+... ...++|+++.+|+.+ +++ .||+|+
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~--~~~~rI~fv~GDa~dlpf~~~l~~~d~sFDlVi 293 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH--VDELRIRTIQGDQNDAEFLDRIARRYGPFDIVI 293 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG--GCBTTEEEEECCTTCHHHHHHHHHHHCCEEEEE
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh--hcCCCcEEEEecccccchhhhhhcccCCccEEE
Confidence 56799999999 5555555555 56999999999954322 236789999999977 332 399997
Q ss_pred e
Q 046950 238 F 238 (239)
Q Consensus 238 l 238 (239)
.
T Consensus 294 s 294 (419)
T 3sso_A 294 D 294 (419)
T ss_dssp E
T ss_pred E
Confidence 4
No 245
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.47 E-value=0.00013 Score=67.31 Aligned_cols=96 Identities=17% Similarity=0.260 Sum_probs=61.2
Q ss_pred hhhhcccCchHHHHHHHHHhhchhhhHHHHHHHhhhh--hhcCCCcEEEecCcchHHHHHHHH----HCCCCeEEEeehH
Q 046950 134 FWEFMNQNPAINQRFNEAMASDSEIMTTFVVKSECKQ--IFEGLGSLVDVGGGNGTFSRIISE----AFPGIKCTVLDLP 207 (239)
Q Consensus 134 ~~e~~~~~~~~~~~f~~~m~~~~~~~~~~~l~~~~~~--~~~~~~~vvDVGGG~G~~~~~l~~----~~P~l~~~~~Dlp 207 (239)
.||-+++|+-.-..|.+|+.. .+. +..+. ...+...|+|||+|+|-+....++ ..-.+++..++-.
T Consensus 323 tYevFEkD~vKy~~Ye~AI~~-------Al~-d~~~~~~~~~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEkn 394 (637)
T 4gqb_A 323 TYEVFEKDPIKYSQYQQAIYK-------CLL-DRVPEEEKDTNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKN 394 (637)
T ss_dssp HHHHHTTCHHHHHHHHHHHHH-------HHH-HHSCGGGTTTCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESC
T ss_pred hhhhhcCChhhHHHHHHHHHH-------HHH-HhhhhccccCCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 366667777666666665521 111 21110 112345799999999988333332 2334578888886
Q ss_pred HHHhcCCC-------CCCeEEEEccCCC-CCCC-ceEEE
Q 046950 208 HAVANLPE-------ADNLKYIAGDMFR-FIPP-ADAFL 237 (239)
Q Consensus 208 ~vi~~a~~-------~~ri~~~~gD~f~-~~p~-~D~~~ 237 (239)
+.+..+.+ .++|+++.||+-+ .+|+ +|+|+
T Consensus 395 p~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIV 433 (637)
T 4gqb_A 395 PNAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIV 433 (637)
T ss_dssp HHHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEE
T ss_pred HHHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEE
Confidence 55554442 7899999999987 7887 99986
No 246
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=97.44 E-value=0.00022 Score=63.32 Aligned_cols=67 Identities=19% Similarity=0.197 Sum_probs=52.7
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCC-CeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCC---CC-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPG-IKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRF---IP-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~-l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~---~p-~-~D~~~l 238 (239)
.....+|||+|||+|..+..+++..|+ .+++.+|. +..++.+++ ..+|+++.+|+.+. ++ . +|+|++
T Consensus 257 ~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl~ 336 (450)
T 2yxl_A 257 PKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVLL 336 (450)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEEE
T ss_pred CCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEEE
Confidence 345679999999999999999999987 89999999 444544432 34799999998763 44 4 899985
No 247
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.42 E-value=0.00016 Score=54.08 Aligned_cols=56 Identities=18% Similarity=0.151 Sum_probs=42.5
Q ss_pred hcCCCcEEEecCcchH-HHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCCCCC----CceEEE
Q 046950 172 FEGLGSLVDVGGGNGT-FSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFRFIP----PADAFL 237 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~-~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~~~p----~~D~~~ 237 (239)
.....++||||||.|. .+..|++. -+..+++.|+ |..++ ++..|+|.|.+ .||+|+
T Consensus 33 ~~~~~rVlEVG~G~g~~vA~~La~~-~g~~V~atDInp~Av~---------~v~dDiF~P~~~~Y~~~DLIY 94 (153)
T 2k4m_A 33 SGPGTRVVEVGAGRFLYVSDYIRKH-SKVDLVLTDIKPSHGG---------IVRDDITSPRMEIYRGAALIY 94 (153)
T ss_dssp SCSSSEEEEETCTTCCHHHHHHHHH-SCCEEEEECSSCSSTT---------EECCCSSSCCHHHHTTEEEEE
T ss_pred CCCCCcEEEEccCCChHHHHHHHHh-CCCeEEEEECCccccc---------eEEccCCCCcccccCCcCEEE
Confidence 3445799999999995 66666653 5688999998 44333 89999999866 489884
No 248
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=97.38 E-value=0.00015 Score=60.97 Aligned_cols=64 Identities=14% Similarity=0.064 Sum_probs=45.5
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CC-------CeEEEEccCCC---------CCC
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----AD-------NLKYIAGDMFR---------FIP 231 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~-------ri~~~~gD~f~---------~~p 231 (239)
...+|||||||+|..+..+++. ...+++++|+ +.+++.|++ .. ++++...|+.. +.|
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~-~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~ 126 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG-EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFY 126 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCC
T ss_pred CCCeEEEEecCCcHhHHHHHhc-CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhcccc
Confidence 3579999999999877776664 3468999999 567777763 11 26788888721 234
Q ss_pred --CceEEEe
Q 046950 232 --PADAFLF 238 (239)
Q Consensus 232 --~~D~~~l 238 (239)
.+|+|+.
T Consensus 127 ~~~FD~V~~ 135 (302)
T 2vdw_A 127 FGKFNIIDW 135 (302)
T ss_dssp SSCEEEEEE
T ss_pred CCCeeEEEE
Confidence 3999874
No 249
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=97.38 E-value=6.2e-05 Score=65.57 Aligned_cols=65 Identities=15% Similarity=0.153 Sum_probs=50.4
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CC-CeEEEEccCCCCC------C-CceEE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------AD-NLKYIAGDMFRFI------P-PADAF 236 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~-ri~~~~gD~f~~~------p-~~D~~ 236 (239)
....+|||+|||+|.++..+++.. ..+++.+|+ |..++.|++ .+ +++++.+|.++.+ . .+|+|
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~g-a~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~I 289 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGG-AMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDII 289 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTT-BSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEE
Confidence 456799999999999999999863 237999999 567666552 23 8999999997722 2 38999
Q ss_pred Ee
Q 046950 237 LF 238 (239)
Q Consensus 237 ~l 238 (239)
++
T Consensus 290 i~ 291 (385)
T 2b78_A 290 II 291 (385)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 250
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=97.35 E-value=9.4e-05 Score=60.93 Aligned_cols=72 Identities=18% Similarity=0.252 Sum_probs=51.8
Q ss_pred HHHHHhhhhhhcCC--CcEEEecCcchHHHHHHHHHCCCCeEEEeehHHH--------HhcCC----C----CCCeEEEE
Q 046950 162 FVVKSECKQIFEGL--GSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHA--------VANLP----E----ADNLKYIA 223 (239)
Q Consensus 162 ~~l~~~~~~~~~~~--~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~v--------i~~a~----~----~~ri~~~~ 223 (239)
.++ +... ..+. .+|||+|||.|..+..+++. ..+++.+|..+. ++.+. . .+||+++.
T Consensus 77 ~l~-~al~--l~~g~~~~VLDl~~G~G~dal~lA~~--g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~ 151 (258)
T 2oyr_A 77 AVA-KAVG--IKGDYLPDVVDATAGLGRDAFVLASV--GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIH 151 (258)
T ss_dssp HHH-HHTT--CBTTBCCCEEETTCTTCHHHHHHHHH--TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEE
T ss_pred HHH-HHhc--ccCCCCCEEEEcCCcCCHHHHHHHHc--CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEE
Confidence 344 4443 3444 79999999999999999998 568999999542 33221 1 15799999
Q ss_pred ccCCC---CCCC-ceEEEe
Q 046950 224 GDMFR---FIPP-ADAFLF 238 (239)
Q Consensus 224 gD~f~---~~p~-~D~~~l 238 (239)
+|..+ .++. +|+|++
T Consensus 152 ~D~~~~L~~~~~~fDvV~l 170 (258)
T 2oyr_A 152 ASSLTALTDITPRPQVVYL 170 (258)
T ss_dssp SCHHHHSTTCSSCCSEEEE
T ss_pred CCHHHHHHhCcccCCEEEE
Confidence 99865 3443 999986
No 251
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=97.32 E-value=0.00048 Score=57.15 Aligned_cols=75 Identities=24% Similarity=0.229 Sum_probs=57.2
Q ss_pred hHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC--CCCeEEEEccCCC------C
Q 046950 159 MTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE--ADNLKYIAGDMFR------F 229 (239)
Q Consensus 159 ~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~--~~ri~~~~gD~f~------~ 229 (239)
+...++ +.+. ......+||.+||.|..+..|+++ +.+++++|. |.+++.+++ .+|++++.+||-+ .
T Consensus 10 Ll~e~l-e~L~--~~~gg~~VD~T~G~GGHS~~il~~--~g~VigiD~Dp~Ai~~A~~L~~~rv~lv~~~f~~l~~~L~~ 84 (285)
T 1wg8_A 10 LYQEAL-DLLA--VRPGGVYVDATLGGAGHARGILER--GGRVIGLDQDPEAVARAKGLHLPGLTVVQGNFRHLKRHLAA 84 (285)
T ss_dssp THHHHH-HHHT--CCTTCEEEETTCTTSHHHHHHHHT--TCEEEEEESCHHHHHHHHHTCCTTEEEEESCGGGHHHHHHH
T ss_pred HHHHHH-HhhC--CCCCCEEEEeCCCCcHHHHHHHHC--CCEEEEEeCCHHHHHHHHhhccCCEEEEECCcchHHHHHHH
Confidence 345666 6665 556679999999999999999998 789999999 666654432 3699999999965 1
Q ss_pred C--CCceEEEe
Q 046950 230 I--PPADAFLF 238 (239)
Q Consensus 230 ~--p~~D~~~l 238 (239)
. ..+|.|++
T Consensus 85 ~g~~~vDgIL~ 95 (285)
T 1wg8_A 85 LGVERVDGILA 95 (285)
T ss_dssp TTCSCEEEEEE
T ss_pred cCCCCcCEEEe
Confidence 2 23788875
No 252
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=97.31 E-value=4.2e-05 Score=62.90 Aligned_cols=38 Identities=18% Similarity=0.330 Sum_probs=27.4
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCC-eEEEeeh-HHHHhcC
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGI-KCTVLDL-PHAVANL 213 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l-~~~~~Dl-p~vi~~a 213 (239)
...+|||||||+|.+...+++. .. +++++|+ |..++.+
T Consensus 55 ~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a 94 (263)
T 2a14_A 55 QGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREEL 94 (263)
T ss_dssp CEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHH
T ss_pred CCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHH
Confidence 4578999999999876655543 33 6999999 4555543
No 253
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=97.29 E-value=7.8e-05 Score=65.09 Aligned_cols=64 Identities=23% Similarity=0.285 Sum_probs=50.9
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCCC------C-CceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRFI------P-PADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~~------p-~~D~~~l 238 (239)
+..+|||+|||+|.++..+++. +..+++.+|+ |..++.+++ .++++++.+|+++.. + .+|+|++
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~-g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~ 295 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVL 295 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEecCCCCHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEE
Confidence 5679999999999999999986 5558999999 667666552 238999999987732 3 3899986
No 254
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.27 E-value=0.00016 Score=59.99 Aligned_cols=39 Identities=21% Similarity=0.300 Sum_probs=28.8
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcC
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANL 213 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a 213 (239)
...+|||||||+|.. ..++...+..+++++|+ |..++.+
T Consensus 71 ~~~~vLDiGcG~G~~-~~l~~~~~~~~v~gvD~s~~~l~~a 110 (289)
T 2g72_A 71 SGRTLIDIGSGPTVY-QLLSACSHFEDITMTDFLEVNRQEL 110 (289)
T ss_dssp CCSEEEEETCTTCCG-GGTTGGGGCSEEEEECSCHHHHHHH
T ss_pred CCCeEEEECCCcChH-HHHhhccCCCeEEEeCCCHHHHHHH
Confidence 457999999999994 44444455669999999 5566544
No 255
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=97.18 E-value=0.00042 Score=64.97 Aligned_cols=76 Identities=14% Similarity=0.119 Sum_probs=56.1
Q ss_pred HHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHH------------------------------------------CC
Q 046950 160 TTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEA------------------------------------------FP 197 (239)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~------------------------------------------~P 197 (239)
+..++ .... +.+...|+|.+||+|.++++.+.. .|
T Consensus 179 Aa~ll-~~~~--~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~~~~~~~~ 255 (703)
T 3v97_A 179 AAAIV-MRSG--WQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRARKGLAEY 255 (703)
T ss_dssp HHHHH-HHTT--CCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHH-HhhC--CCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHhhhccccC
Confidence 34455 5444 456679999999999999988765 34
Q ss_pred CCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC-CC----CceEEEe
Q 046950 198 GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF-IP----PADAFLF 238 (239)
Q Consensus 198 ~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~-~p----~~D~~~l 238 (239)
+.+++++|+ |.+++.|+. .++|++..+|+++- .| .+|+|+.
T Consensus 256 ~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~ 309 (703)
T 3v97_A 256 SSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLS 309 (703)
T ss_dssp CCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEE
T ss_pred CccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEe
Confidence 568999999 667776652 45799999999872 23 4788874
No 256
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=97.17 E-value=0.00027 Score=62.37 Aligned_cols=66 Identities=15% Similarity=0.158 Sum_probs=51.3
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCCC---CC-C-ceEEEe
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFRF---IP-P-ADAFLF 238 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~~---~p-~-~D~~~l 238 (239)
....+|||+|||+|..+..+++..|+.+++.+|. +..++.+++ .-+++++.+|+.+. .+ . +|+|++
T Consensus 245 ~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~ 321 (429)
T 1sqg_A 245 QNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILL 321 (429)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEE
T ss_pred CCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEE
Confidence 4567999999999999999999999999999999 334443331 23589999999773 33 3 999985
No 257
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=97.17 E-value=0.00015 Score=63.56 Aligned_cols=62 Identities=13% Similarity=0.212 Sum_probs=49.1
Q ss_pred CCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC--------CCCeEEEEccCCCCC---C--CceEEEe
Q 046950 175 LGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE--------ADNLKYIAGDMFRFI---P--PADAFLF 238 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~--------~~ri~~~~gD~f~~~---p--~~D~~~l 238 (239)
..+|+|+|||+|..+..+++. ..+++.+|. |..++.++. .++|+++.+|+++-+ + .+|+|++
T Consensus 94 g~~VLDLgcG~G~~al~LA~~--g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~l 169 (410)
T 3ll7_A 94 GTKVVDLTGGLGIDFIALMSK--ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYV 169 (410)
T ss_dssp TCEEEESSCSSSHHHHHHHTT--CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEE
T ss_pred CCEEEEeCCCchHHHHHHHhc--CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEE
Confidence 579999999999999998887 468999999 556665542 257999999998732 2 3899986
No 258
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=97.12 E-value=0.00014 Score=63.45 Aligned_cols=65 Identities=11% Similarity=0.117 Sum_probs=51.0
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------C-C-CeEEEEccCCCCC------C-CceEE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------A-D-NLKYIAGDMFRFI------P-PADAF 236 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~-~-ri~~~~gD~f~~~------p-~~D~~ 236 (239)
.+..+|||+|||+|.++..+++.. ..+++.+|+ |..++.+++ . + +++++.+|+++.. + .+|+|
T Consensus 219 ~~~~~VLDl~cG~G~~sl~la~~g-~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~I 297 (396)
T 3c0k_A 219 VENKRVLNCFSYTGGFAVSALMGG-CSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVI 297 (396)
T ss_dssp CTTCEEEEESCTTCSHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEE
T ss_pred hCCCeEEEeeccCCHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEE
Confidence 456799999999999999999864 458999999 566666542 2 3 8999999988732 2 38999
Q ss_pred Ee
Q 046950 237 LF 238 (239)
Q Consensus 237 ~l 238 (239)
++
T Consensus 298 i~ 299 (396)
T 3c0k_A 298 VM 299 (396)
T ss_dssp EE
T ss_pred EE
Confidence 86
No 259
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=97.12 E-value=0.00013 Score=63.34 Aligned_cols=63 Identities=16% Similarity=0.180 Sum_probs=50.5
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCCC------C-CceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRFI------P-PADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~~------p-~~D~~~l 238 (239)
...+|||+|||+|.++..+++. ..+++.+|+ |..++.++. .++++++.+|.++.. + .+|+|++
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~--~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~ 285 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG--FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL 285 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH--EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeeccCHHHHHHHHh--CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEE
Confidence 5679999999999999999998 568999999 667776653 234999999987732 3 3899986
No 260
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=97.12 E-value=0.00027 Score=61.09 Aligned_cols=52 Identities=25% Similarity=0.337 Sum_probs=42.0
Q ss_pred CCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC
Q 046950 175 LGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR 228 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~ 228 (239)
..+|+|+|||+|.++..+++.. .+++.+|. |+.++.|+. .++++++.+|.++
T Consensus 214 ~~~vLDl~cG~G~~~l~la~~~--~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~ 272 (369)
T 3bt7_A 214 KGDLLELYCGNGNFSLALARNF--DRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEE 272 (369)
T ss_dssp CSEEEEESCTTSHHHHHHGGGS--SEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHH
T ss_pred CCEEEEccCCCCHHHHHHHhcC--CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHH
Confidence 4689999999999999988753 47999999 667766552 3589999999865
No 261
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.10 E-value=0.0005 Score=57.53 Aligned_cols=74 Identities=9% Similarity=0.122 Sum_probs=46.7
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhc-CCCCCCeEEEEc-cCC--C--CCC--C
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVAN-LPEADNLKYIAG-DMF--R--FIP--P 232 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~-a~~~~ri~~~~g-D~f--~--~~p--~ 232 (239)
..+ +.+. .-....++||||||+|.++..+++. +..+++.+|. +.+++. ++...|+..+.. |+. + .+| .
T Consensus 75 ~~l-~~~~-~~~~g~~vLDiGcGTG~~t~~L~~~-ga~~V~aVDvs~~mL~~a~r~~~rv~~~~~~ni~~l~~~~l~~~~ 151 (291)
T 3hp7_A 75 KAL-AVFN-LSVEDMITIDIGASTGGFTDVMLQN-GAKLVYAVDVGTNQLVWKLRQDDRVRSMEQYNFRYAEPVDFTEGL 151 (291)
T ss_dssp HHH-HHTT-CCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSSSCSCHHHHTCTTEEEECSCCGGGCCGGGCTTCC
T ss_pred HHH-HhcC-CCccccEEEecCCCccHHHHHHHhC-CCCEEEEEECCHHHHHHHHHhCcccceecccCceecchhhCCCCC
Confidence 345 5554 1124569999999999999988886 6668999999 445544 233456654433 432 1 234 2
Q ss_pred ceEEEe
Q 046950 233 ADAFLF 238 (239)
Q Consensus 233 ~D~~~l 238 (239)
+|+++.
T Consensus 152 fD~v~~ 157 (291)
T 3hp7_A 152 PSFASI 157 (291)
T ss_dssp CSEEEE
T ss_pred CCEEEE
Confidence 787753
No 262
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=97.09 E-value=0.00027 Score=61.82 Aligned_cols=72 Identities=19% Similarity=0.272 Sum_probs=48.5
Q ss_pred HHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCC-----CC--C
Q 046950 160 TTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFR-----FI--P 231 (239)
Q Consensus 160 ~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~-----~~--p 231 (239)
...++ +.+. .....+|||||||+|.++..+++. ..+++++|. +..++.+++. ++.... ++|. .+ +
T Consensus 96 ~~~l~-~~~~--~~~~~~VLDiGcG~G~~~~~l~~~--g~~v~gvD~s~~~~~~a~~~-~~~~~~-~~~~~~~~~~l~~~ 168 (416)
T 4e2x_A 96 ARDFL-ATEL--TGPDPFIVEIGCNDGIMLRTIQEA--GVRHLGFEPSSGVAAKAREK-GIRVRT-DFFEKATADDVRRT 168 (416)
T ss_dssp HHHHH-HTTT--CSSSCEEEEETCTTTTTHHHHHHT--TCEEEEECCCHHHHHHHHTT-TCCEEC-SCCSHHHHHHHHHH
T ss_pred HHHHH-HHhC--CCCCCEEEEecCCCCHHHHHHHHc--CCcEEEECCCHHHHHHHHHc-CCCcce-eeechhhHhhcccC
Confidence 34455 5554 456779999999999999999987 448999999 5577766543 333332 2232 12 2
Q ss_pred --CceEEEe
Q 046950 232 --PADAFLF 238 (239)
Q Consensus 232 --~~D~~~l 238 (239)
.+|+|+.
T Consensus 169 ~~~fD~I~~ 177 (416)
T 4e2x_A 169 EGPANVIYA 177 (416)
T ss_dssp HCCEEEEEE
T ss_pred CCCEEEEEE
Confidence 3899875
No 263
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=97.04 E-value=0.00055 Score=60.66 Aligned_cols=65 Identities=17% Similarity=0.096 Sum_probs=49.6
Q ss_pred CCCcEEEecCcchHHHHHHHHHC-------------CCCeEEEeeh-HHHHhcCCC------C--CCeEEEEccCCCCC-
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAF-------------PGIKCTVLDL-PHAVANLPE------A--DNLKYIAGDMFRFI- 230 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~-------------P~l~~~~~Dl-p~vi~~a~~------~--~ri~~~~gD~f~~~- 230 (239)
...+|+|.|||+|.++..+.+.. +..+++++|+ |.+++.|+. . .++++..+|.+...
T Consensus 171 ~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~l~g~~~~~~~i~~gD~l~~~~ 250 (445)
T 2okc_A 171 MGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLYLHGIGTDRSPIVCEDSLEKEP 250 (445)
T ss_dssp TTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHHHTTCCSSCCSEEECCTTTSCC
T ss_pred CCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHHHhCCCcCCCCEeeCCCCCCcc
Confidence 35699999999999999988864 5578999999 666665542 1 26889999998843
Q ss_pred C-CceEEEe
Q 046950 231 P-PADAFLF 238 (239)
Q Consensus 231 p-~~D~~~l 238 (239)
. .+|+|+.
T Consensus 251 ~~~fD~Iv~ 259 (445)
T 2okc_A 251 STLVDVILA 259 (445)
T ss_dssp SSCEEEEEE
T ss_pred cCCcCEEEE
Confidence 3 3999874
No 264
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=97.00 E-value=0.00053 Score=59.87 Aligned_cols=63 Identities=14% Similarity=0.067 Sum_probs=46.9
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-----CCCeEEEEccCCCC---CCC-ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-----ADNLKYIAGDMFRF---IPP-ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-----~~ri~~~~gD~f~~---~p~-~D~~~l 238 (239)
+..+|||+|||+|.++..+++.. .+++.+|+ |..++.+++ .-..++..+|.++. .+. +|+|++
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~g--a~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~ 286 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKG--AYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLL 286 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTT--CEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEE
T ss_pred CCCeEEEcccchhHHHHHHHHcC--CeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEE
Confidence 36799999999999999999974 44999999 556666542 11134669998873 233 999986
No 265
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=96.98 E-value=0.0011 Score=54.95 Aligned_cols=41 Identities=20% Similarity=0.472 Sum_probs=30.3
Q ss_pred CCCcEEEecCcchHHHH----HHHHHCCCCeE--EEeeh-HHHHhcCC
Q 046950 174 GLGSLVDVGGGNGTFSR----IISEAFPGIKC--TVLDL-PHAVANLP 214 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~----~l~~~~P~l~~--~~~Dl-p~vi~~a~ 214 (239)
+..+|||||||+|.++. .++.++|+.++ +++|. ++.++.++
T Consensus 52 ~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~ 99 (292)
T 2aot_A 52 SEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYK 99 (292)
T ss_dssp SEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHH
T ss_pred CCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHH
Confidence 34689999999997544 55667798865 99998 55666543
No 266
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=96.92 E-value=0.0014 Score=58.64 Aligned_cols=65 Identities=20% Similarity=0.158 Sum_probs=51.4
Q ss_pred CCCcEEEecCcchHHHHHHHHHCC-CCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC--C-CCC-ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFP-GIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR--F-IPP-ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~--~-~p~-~D~~~l 238 (239)
...+|||+|||+|..+..+++..+ ..+++.+|+ +..++.+++ ..+|+++.+|..+ . .+. +|+|++
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~ 193 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILL 193 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEE
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEE
Confidence 567999999999999999999876 578999999 445554432 3579999999876 2 444 999986
No 267
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=96.91 E-value=0.00077 Score=63.18 Aligned_cols=64 Identities=9% Similarity=0.047 Sum_probs=49.9
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC-------C-CCeEEEEccCCCC---CCC-ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE-------A-DNLKYIAGDMFRF---IPP-ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~-------~-~ri~~~~gD~f~~---~p~-~D~~~l 238 (239)
..++|||+|||+|.++..+++.. ..+++.+|+ |..++.+++ . ++++++.+|.++. ... +|+|++
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~g-a~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~ 615 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGG-ARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFI 615 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTT-CSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEE
T ss_pred CCCcEEEeeechhHHHHHHHHCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEE
Confidence 46799999999999999998843 346999999 556665542 2 5899999999873 233 999986
No 268
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=96.91 E-value=0.0017 Score=54.71 Aligned_cols=67 Identities=12% Similarity=0.115 Sum_probs=51.1
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHC-CCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCC---C---CCceEEE
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAF-PGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRF---I---PPADAFL 237 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~---~---p~~D~~~ 237 (239)
.....+|||+|||.|..+..+++.. +..+++.+|+ +..++.+++ ..+|+++.+|+.+- . ..+|+|+
T Consensus 100 ~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~Vl 179 (309)
T 2b9e_A 100 PPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYIL 179 (309)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEEE
Confidence 3456799999999999999999875 5689999999 445554432 35799999998762 1 2389998
Q ss_pred e
Q 046950 238 F 238 (239)
Q Consensus 238 l 238 (239)
+
T Consensus 180 ~ 180 (309)
T 2b9e_A 180 L 180 (309)
T ss_dssp E
T ss_pred E
Confidence 6
No 269
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=96.87 E-value=0.0005 Score=61.25 Aligned_cols=66 Identities=14% Similarity=0.070 Sum_probs=51.2
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCC-CeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCC---CCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPG-IKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRF---IPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~-l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~---~p~-~D~~~l 238 (239)
.....+|||+|||+|..+..+++..++ .+++.+|+ +..++.+++ .. |+++.+|..+- .+. +|+|++
T Consensus 99 ~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~-v~~~~~Da~~l~~~~~~~FD~Il~ 176 (464)
T 3m6w_A 99 PKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP-LAVTQAPPRALAEAFGTYFHRVLL 176 (464)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC-CEEECSCHHHHHHHHCSCEEEEEE
T ss_pred cCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe-EEEEECCHHHhhhhccccCCEEEE
Confidence 345679999999999999999999875 78999999 555555442 33 89999997652 344 999985
No 270
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=96.82 E-value=0.0011 Score=57.56 Aligned_cols=65 Identities=11% Similarity=0.014 Sum_probs=50.5
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC---------------------CCCeEEEEccCCCC--
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE---------------------ADNLKYIAGDMFRF-- 229 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~---------------------~~ri~~~~gD~f~~-- 229 (239)
...+|||+|||+|..++.++++.|..+++..|+ |..++.+++ .+.++++.+|..+.
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 467899999999999999999999889999999 555554331 12389999998662
Q ss_pred -CCC-ceEEEe
Q 046950 230 -IPP-ADAFLF 238 (239)
Q Consensus 230 -~p~-~D~~~l 238 (239)
.+. +|+|++
T Consensus 127 ~~~~~fD~I~l 137 (378)
T 2dul_A 127 ERHRYFHFIDL 137 (378)
T ss_dssp HSTTCEEEEEE
T ss_pred hccCCCCEEEe
Confidence 233 899875
No 271
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=96.79 E-value=0.0014 Score=54.81 Aligned_cols=59 Identities=19% Similarity=0.223 Sum_probs=44.3
Q ss_pred hcCCCcEEEecC------cchHHHHHHHHHCC-CCeEEEeehHHHHhcCCCCCCeEE-EEccCCC-CCCC-ceEEEe
Q 046950 172 FEGLGSLVDVGG------GNGTFSRIISEAFP-GIKCTVLDLPHAVANLPEADNLKY-IAGDMFR-FIPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGG------G~G~~~~~l~~~~P-~l~~~~~Dlp~vi~~a~~~~ri~~-~~gD~f~-~~p~-~D~~~l 238 (239)
+....+|||||| |.|. ..+++..| +.+++.+|+.+.+ +++++ +.+|+.+ +.+. +|+|+.
T Consensus 61 l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~v------~~v~~~i~gD~~~~~~~~~fD~Vvs 129 (290)
T 2xyq_A 61 VPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFV------SDADSTLIGDCATVHTANKWDLIIS 129 (290)
T ss_dssp CCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCB------CSSSEEEESCGGGCCCSSCEEEEEE
T ss_pred CCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCCC------CCCEEEEECccccCCccCcccEEEE
Confidence 445679999999 4477 55566777 6899999996542 46889 9999987 3444 999974
No 272
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=96.78 E-value=0.0019 Score=52.15 Aligned_cols=48 Identities=17% Similarity=0.241 Sum_probs=34.4
Q ss_pred HHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhc
Q 046950 162 FVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVAN 212 (239)
Q Consensus 162 ~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~ 212 (239)
..+ +.+. ......+|||||||+|.++..+++. +..+++.+|+ |..++.
T Consensus 27 ~~L-~~~~-~~~~g~~VLDiGcGtG~~t~~la~~-g~~~V~gvDis~~ml~~ 75 (232)
T 3opn_A 27 KAL-KEFH-LEINGKTCLDIGSSTGGFTDVMLQN-GAKLVYALDVGTNQLAW 75 (232)
T ss_dssp HHH-HHTT-CCCTTCEEEEETCTTSHHHHHHHHT-TCSEEEEECSSCCCCCH
T ss_pred HHH-HHcC-CCCCCCEEEEEccCCCHHHHHHHhc-CCCEEEEEcCCHHHHHH
Confidence 344 5544 1224569999999999999999987 4348999999 444443
No 273
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=96.76 E-value=0.0012 Score=56.92 Aligned_cols=64 Identities=16% Similarity=0.239 Sum_probs=50.5
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCCCCCeEEEEccCCCCCC---CceEEE
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPEADNLKYIAGDMFRFIP---PADAFL 237 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~~~ri~~~~gD~f~~~p---~~D~~~ 237 (239)
+.+..++||+|++.|.+...++++ ..+++.+|.-+..+.....++|+++.+|.|+-.| .+|+++
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r--g~~V~aVD~~~l~~~l~~~~~V~~~~~d~~~~~~~~~~~D~vv 275 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR--NMWVYSVDNGPMAQSLMDTGQVTWLREDGFKFRPTRSNISWMV 275 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT--TCEEEEECSSCCCHHHHTTTCEEEECSCTTTCCCCSSCEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC--CCEEEEEEhhhcChhhccCCCeEEEeCccccccCCCCCcCEEE
Confidence 456789999999999999999987 6899999984433333336789999999999544 278876
No 274
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=96.74 E-value=0.00063 Score=60.49 Aligned_cols=67 Identities=13% Similarity=0.104 Sum_probs=51.2
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCC-CeEEEeeh-HHHHhcCCC------CCCeEEEEccCCCC---CCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPG-IKCTVLDL-PHAVANLPE------ADNLKYIAGDMFRF---IPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~-l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~~---~p~-~D~~~l 238 (239)
.....+|||+|||+|..+..+++..++ .+++.+|+ +..++.+++ ..+|+++.+|..+- .+. +|+|++
T Consensus 103 ~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~ 181 (456)
T 3m4x_A 103 AKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVV 181 (456)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEE
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEE
Confidence 345679999999999999999998764 78999999 445554432 35699999997651 344 999985
No 275
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=96.67 E-value=0.001 Score=57.96 Aligned_cols=65 Identities=11% Similarity=-0.081 Sum_probs=51.3
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCC-CeEEEeeh-HHHHhcCCC-------CCC-eEEEEccCCC----CCCC-ceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPG-IKCTVLDL-PHAVANLPE-------ADN-LKYIAGDMFR----FIPP-ADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~-l~~~~~Dl-p~vi~~a~~-------~~r-i~~~~gD~f~----~~p~-~D~~~l 238 (239)
+..+|||+++|+|.+++.++++.++ -+++.+|+ |..++.+++ .++ ++++.+|.++ ..+. ||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 4578999999999999999998776 47899999 666665542 455 9999999865 2333 999986
No 276
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=96.58 E-value=0.0018 Score=60.12 Aligned_cols=63 Identities=19% Similarity=0.166 Sum_probs=43.5
Q ss_pred CCcEEEecCcchHHHHHHHH----HC---------CCCeEEEeehHH-HHhcCC------CCCCeEEEEccCCC-CC---
Q 046950 175 LGSLVDVGGGNGTFSRIISE----AF---------PGIKCTVLDLPH-AVANLP------EADNLKYIAGDMFR-FI--- 230 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~----~~---------P~l~~~~~Dlp~-vi~~a~------~~~ri~~~~gD~f~-~~--- 230 (239)
.+.|+|||||+|.+....++ +. ...+++.+|-.+ ++...+ -.++|+++.+|+-+ ..
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~Ng~~d~VtVI~gd~eev~lp~~ 489 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNVRTWKRRVTIIESDMRSLPGIAK 489 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHHHTTTTCSEEEESCGGGHHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHhcCCCCeEEEEeCchhhcccccc
Confidence 56899999999999643222 22 345889999843 222111 16889999999977 45
Q ss_pred ---CC-ceEEE
Q 046950 231 ---PP-ADAFL 237 (239)
Q Consensus 231 ---p~-~D~~~ 237 (239)
|. +|+|+
T Consensus 490 ~~~~ekVDIIV 500 (745)
T 3ua3_A 490 DRGFEQPDIIV 500 (745)
T ss_dssp HTTCCCCSEEE
T ss_pred cCCCCcccEEE
Confidence 55 99986
No 277
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=96.45 E-value=0.0017 Score=56.13 Aligned_cols=64 Identities=14% Similarity=0.166 Sum_probs=50.3
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC--------------CCCeEEEEccCCCC------C-C
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE--------------ADNLKYIAGDMFRF------I-P 231 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~--------------~~ri~~~~gD~f~~------~-p 231 (239)
++++||=||||.|..++++++. |.-+++++|+ |.|++.+++ .+|++++.+|-++- - .
T Consensus 205 ~pkrVLIIGgGdG~~~revlkh-~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 205 TGKDVLILGGGDGGILCEIVKL-KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT-CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCeEEEECCCcHHHHHHHHhc-CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 4689999999999999999985 5578999999 778776541 36799999997651 1 2
Q ss_pred CceEEEe
Q 046950 232 PADAFLF 238 (239)
Q Consensus 232 ~~D~~~l 238 (239)
.+|+|++
T Consensus 284 ~yDvIIv 290 (381)
T 3c6k_A 284 EFDYVIN 290 (381)
T ss_dssp CEEEEEE
T ss_pred ceeEEEE
Confidence 3899875
No 278
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=96.23 E-value=0.0082 Score=51.00 Aligned_cols=77 Identities=21% Similarity=0.229 Sum_probs=59.2
Q ss_pred hHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHC-CCCeEEEeeh-HHHHhcCCC--CCCeEEEEccCCC------
Q 046950 159 MTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAF-PGIKCTVLDL-PHAVANLPE--ADNLKYIAGDMFR------ 228 (239)
Q Consensus 159 ~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dl-p~vi~~a~~--~~ri~~~~gD~f~------ 228 (239)
+...++ +.+. ......+||..+|.|..+..|+++. |+.+++.+|. |.+++.++. .+|++++.+||-+
T Consensus 45 Ll~Evl-~~L~--i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~rL~~~Rv~lv~~nF~~l~~~L~ 121 (347)
T 3tka_A 45 LLDEAV-NGLN--IRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAKTIDDPRFSIIHGPFSALGEYVA 121 (347)
T ss_dssp TTHHHH-HHTC--CCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHTTCCCTTEEEEESCGGGHHHHHH
T ss_pred cHHHHH-HhhC--CCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhhcCCcEEEEeCCHHHHHHHHH
Confidence 345566 6665 4556799999999999999999985 8899999999 667776642 5799999999865
Q ss_pred C--CC-CceEEEe
Q 046950 229 F--IP-PADAFLF 238 (239)
Q Consensus 229 ~--~p-~~D~~~l 238 (239)
+ ++ ..|.|++
T Consensus 122 ~~g~~~~vDgILf 134 (347)
T 3tka_A 122 ERDLIGKIDGILL 134 (347)
T ss_dssp HTTCTTCEEEEEE
T ss_pred hcCCCCcccEEEE
Confidence 1 23 3787775
No 279
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=95.86 E-value=0.0071 Score=54.92 Aligned_cols=65 Identities=14% Similarity=0.043 Sum_probs=47.0
Q ss_pred CCCcEEEecCcchHHHHHHHHHCC------------------CCeEEEeeh-HHHHhcCCC------CC-----CeEEEE
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFP------------------GIKCTVLDL-PHAVANLPE------AD-----NLKYIA 223 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P------------------~l~~~~~Dl-p~vi~~a~~------~~-----ri~~~~ 223 (239)
...+|+|.+||+|.++..+.+... ..+++++|+ |.++..|+. .+ ++++..
T Consensus 169 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~lA~~nl~l~gi~~~~~~~~~I~~ 248 (541)
T 2ar0_A 169 PREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRLALMNCLLHDIEGNLDHGGAIRL 248 (541)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHHHHHHHHTTTCCCBGGGTBSEEE
T ss_pred CCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHHHHHHHHHhCCCccccccCCeEe
Confidence 346999999999999998877532 246899999 555554431 22 278899
Q ss_pred ccCCCC----CCCceEEEe
Q 046950 224 GDMFRF----IPPADAFLF 238 (239)
Q Consensus 224 gD~f~~----~p~~D~~~l 238 (239)
+|.+.. .+.+|+|+.
T Consensus 249 gDtL~~~~~~~~~fD~Vv~ 267 (541)
T 2ar0_A 249 GNTLGSDGENLPKAHIVAT 267 (541)
T ss_dssp SCTTSHHHHTSCCEEEEEE
T ss_pred CCCcccccccccCCeEEEE
Confidence 999873 234999875
No 280
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=95.44 E-value=0.023 Score=45.78 Aligned_cols=67 Identities=21% Similarity=0.280 Sum_probs=48.5
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCC---C---CCCeEEEEc-cCCCCCCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLP---E---ADNLKYIAG-DMFRFIPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~---~---~~ri~~~~g-D~f~~~p~-~D~~~l 238 (239)
+....+|||+||+.|.++.-.+....-.+++.+|+-..-..-+ + -+-|+|..+ |+|.--|. +|+++.
T Consensus 76 l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P~~~~s~gwn~v~fk~gvDv~~~~~~~~Dtllc 150 (267)
T 3p8z_A 76 VIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEPVPMSTYGWNIVKLMSGKDVFYLPPEKCDTLLC 150 (267)
T ss_dssp SCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCCCCCCCTTTTSEEEECSCCGGGCCCCCCSEEEE
T ss_pred CCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCcchhhhcCcCceEEEeccceeecCCccccEEEE
Confidence 5566799999999999999887777666899999943211111 1 356999999 98763333 888874
No 281
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=95.24 E-value=0.014 Score=55.10 Aligned_cols=65 Identities=12% Similarity=0.134 Sum_probs=46.1
Q ss_pred CCCcEEEecCcchHHHHHHHHHCC---CCeEEEeeh-HHHHhcC--C----------CCCCeEEEEccCCCCC----CCc
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFP---GIKCTVLDL-PHAVANL--P----------EADNLKYIAGDMFRFI----PPA 233 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P---~l~~~~~Dl-p~vi~~a--~----------~~~ri~~~~gD~f~~~----p~~ 233 (239)
...+|+|.|||+|.++.+++++.+ ..+++++|+ |.+++.| + ..+...+...|++.+. ..+
T Consensus 321 ~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN~LlhGi~~~~I~~dD~L~~~~~~~~kF 400 (878)
T 3s1s_A 321 EDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFPQLVSSNNAPTITGEDVCSLNPEDFANV 400 (878)
T ss_dssp TTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTSTTTCBTTBCCEEECCCGGGCCGGGGTTE
T ss_pred CCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHhhhhcCCCcceEEecchhcccccccCCC
Confidence 457999999999999999999887 357899999 4454444 1 0122356677787632 239
Q ss_pred eEEEe
Q 046950 234 DAFLF 238 (239)
Q Consensus 234 D~~~l 238 (239)
|+|+.
T Consensus 401 DVVIg 405 (878)
T 3s1s_A 401 SVVVM 405 (878)
T ss_dssp EEEEE
T ss_pred CEEEE
Confidence 99874
No 282
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=95.22 E-value=0.012 Score=53.48 Aligned_cols=65 Identities=15% Similarity=0.031 Sum_probs=49.6
Q ss_pred CCCcEEEecCcchHHHHHHHHHC---CCCeEEEeeh-HHHHhcCCC--------CCCeEEEEccCCCC-CC----C-ceE
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAF---PGIKCTVLDL-PHAVANLPE--------ADNLKYIAGDMFRF-IP----P-ADA 235 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~---P~l~~~~~Dl-p~vi~~a~~--------~~ri~~~~gD~f~~-~p----~-~D~ 235 (239)
...+|+|.+||+|.++.++.+.. +..++.++|+ |.++..|+. .+++.+..+|.+.. .| . +|+
T Consensus 221 ~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~~~~I~~gDtL~~d~p~~~~~~fD~ 300 (542)
T 3lkd_A 221 QGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVPIENQFLHNADTLDEDWPTQEPTNFDG 300 (542)
T ss_dssp TTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCTTTSCSCCSSCCCBSE
T ss_pred CCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCCcCccceEecceecccccccccccccE
Confidence 35699999999999999999885 4678999999 555554431 25688999999874 22 2 899
Q ss_pred EEe
Q 046950 236 FLF 238 (239)
Q Consensus 236 ~~l 238 (239)
|+.
T Consensus 301 Iva 303 (542)
T 3lkd_A 301 VLM 303 (542)
T ss_dssp EEE
T ss_pred EEe
Confidence 874
No 283
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=95.10 E-value=0.0091 Score=54.23 Aligned_cols=63 Identities=21% Similarity=0.129 Sum_probs=45.6
Q ss_pred CcEEEecCcchHHHHHHHHHCC---------------CCeEEEeeh-HHHHhcCCC-------CCCeEEEEccCCCC--C
Q 046950 176 GSLVDVGGGNGTFSRIISEAFP---------------GIKCTVLDL-PHAVANLPE-------ADNLKYIAGDMFRF--I 230 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P---------------~l~~~~~Dl-p~vi~~a~~-------~~ri~~~~gD~f~~--~ 230 (239)
.+|+|.+||+|.++.++.+..+ ..++.++|+ |.++..|+. ..+|.+..+|.+.. .
T Consensus 246 ~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~ 325 (544)
T 3khk_A 246 GRVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAMNMVIRGIDFNFGKKNADSFLDDQH 325 (544)
T ss_dssp EEEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHHHHHHTTCCCBCCSSSCCTTTSCSC
T ss_pred CeEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHHHHHHhCCCcccceeccchhcCccc
Confidence 4999999999999998866443 567899999 556555441 33455588998873 2
Q ss_pred C--CceEEEe
Q 046950 231 P--PADAFLF 238 (239)
Q Consensus 231 p--~~D~~~l 238 (239)
+ .+|+|+.
T Consensus 326 ~~~~fD~Iv~ 335 (544)
T 3khk_A 326 PDLRADFVMT 335 (544)
T ss_dssp TTCCEEEEEE
T ss_pred ccccccEEEE
Confidence 2 2999875
No 284
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=95.02 E-value=0.026 Score=46.55 Aligned_cols=36 Identities=25% Similarity=0.298 Sum_probs=30.1
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehH
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp 207 (239)
+....+|||+|||.|.++...++..|-..++.+|+-
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG 123 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLG 123 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCC
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEec
Confidence 556679999999999999999888876677777773
No 285
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=94.79 E-value=0.0062 Score=49.70 Aligned_cols=66 Identities=21% Similarity=0.301 Sum_probs=41.3
Q ss_pred hhcCCCcEEEecCcchHHHHHHHHH--CCCCeE--EEeehHHHHhcCCCCCCe---EEEEc-cCCCCCCC-ceEEE
Q 046950 171 IFEGLGSLVDVGGGNGTFSRIISEA--FPGIKC--TVLDLPHAVANLPEADNL---KYIAG-DMFRFIPP-ADAFL 237 (239)
Q Consensus 171 ~~~~~~~vvDVGGG~G~~~~~l~~~--~P~l~~--~~~Dlp~vi~~a~~~~ri---~~~~g-D~f~~~p~-~D~~~ 237 (239)
.+.+..+|||+||+.|.++.-.++. -..+++ +..|+ +..+......++ .++.| ||++..|. +|+++
T Consensus 70 likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~~~P~~~~~~Gv~~i~~~~G~Df~~~~~~~~DvVL 144 (269)
T 2px2_A 70 FVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-HEEPMLMQSYGWNIVTMKSGVDVFYKPSEISDTLL 144 (269)
T ss_dssp SCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-SCCCCCCCSTTGGGEEEECSCCGGGSCCCCCSEEE
T ss_pred CCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-ccCCCcccCCCceEEEeeccCCccCCCCCCCCEEE
Confidence 3667889999999999999988885 212133 44443 111111111444 55557 99985553 89987
No 286
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=94.65 E-value=0.088 Score=45.06 Aligned_cols=54 Identities=19% Similarity=0.190 Sum_probs=40.9
Q ss_pred CCcEEEecCcchHHHHHHHHHCCCCeEEEeehH-HHHhcCC---CCCCeEEEEccCCC
Q 046950 175 LGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLP-HAVANLP---EADNLKYIAGDMFR 228 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp-~vi~~a~---~~~ri~~~~gD~f~ 228 (239)
..+|||||.|.|.+...|+++...-++++++.. .-++..+ ..++++++.+|+++
T Consensus 59 ~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~~~~~l~ii~~D~l~ 116 (353)
T 1i4w_A 59 ELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKFEGSPLQILKRDPYD 116 (353)
T ss_dssp TCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHTTTSSCEEECSCTTC
T ss_pred CCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhccCCCEEEEECCccc
Confidence 478999999999999999997544578888883 2222211 35789999999975
No 287
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=94.56 E-value=0.066 Score=45.49 Aligned_cols=56 Identities=18% Similarity=0.194 Sum_probs=48.0
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC---------------------------CCCeEEEEcc
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE---------------------------ADNLKYIAGD 225 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~---------------------------~~ri~~~~gD 225 (239)
.+.+.||.+|||.......|...+|+++++=+|+|+|++.-+. .+++.+++.|
T Consensus 96 ~~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 96 NEKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDYNESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp CSSEEEEEETCTTCCTHHHHHHHCTTEEEEEEECHHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCCcEEEEeCCCCccHHHHhcCcCCCCEEEECCCHHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 4578999999999999999999999999999999998763210 3789999999
Q ss_pred CCC
Q 046950 226 MFR 228 (239)
Q Consensus 226 ~f~ 228 (239)
+.+
T Consensus 176 L~d 178 (334)
T 1rjd_A 176 LND 178 (334)
T ss_dssp TTC
T ss_pred CCC
Confidence 987
No 288
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=94.56 E-value=0.049 Score=44.87 Aligned_cols=36 Identities=17% Similarity=0.200 Sum_probs=27.9
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehH
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp 207 (239)
+....+|||+|||.|.++..+++..|--+++.+|+-
T Consensus 72 l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVG 107 (277)
T 3evf_A 72 VKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLG 107 (277)
T ss_dssp SCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCC
T ss_pred CCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEe
Confidence 556679999999999999988887665555555553
No 289
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=93.66 E-value=0.057 Score=44.91 Aligned_cols=67 Identities=18% Similarity=0.258 Sum_probs=46.0
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHH-Hhc--C-CC--CCCeEEEEc-cCCCCCCC-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHA-VAN--L-PE--ADNLKYIAG-DMFRFIPP-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~v-i~~--a-~~--~~ri~~~~g-D~f~~~p~-~D~~~l 238 (239)
+....+||||||+.|.++.-.+....-.++..+|+-.. .+. . +. -.-|.++.+ |++.--|. +|+++.
T Consensus 92 l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P~~~~ql~w~lV~~~~~~Dv~~l~~~~~D~ivc 166 (321)
T 3lkz_A 92 LEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEPQLVQSYGWNIVTMKSGVDVFYRPSECCDTLLC 166 (321)
T ss_dssp CCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCCCCCCBTTGGGEEEECSCCTTSSCCCCCSEEEE
T ss_pred CCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCcchhhhcCCcceEEEeccCHhhCCCCCCCEEEE
Confidence 45566999999999999997777766668999999332 110 0 00 133889998 97663333 888764
No 290
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=93.14 E-value=0.067 Score=43.70 Aligned_cols=33 Identities=18% Similarity=0.190 Sum_probs=27.1
Q ss_pred CCCcEEEecCcchHHHHHHHHH-------CCC-----CeEEEeeh
Q 046950 174 GLGSLVDVGGGNGTFSRIISEA-------FPG-----IKCTVLDL 206 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~-------~P~-----l~~~~~Dl 206 (239)
+..+|+|||.|+|..+..+++. +|+ ++++.++.
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~ 104 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEK 104 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEES
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEEC
Confidence 3469999999999998887665 784 68898886
No 291
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=92.94 E-value=0.06 Score=46.47 Aligned_cols=63 Identities=27% Similarity=0.463 Sum_probs=44.1
Q ss_pred CCcEEEecCcchHHHHHH--------HHHC-------CCCeEEEeehHHH--------HhcCCC-----------CCC--
Q 046950 175 LGSLVDVGGGNGTFSRII--------SEAF-------PGIKCTVLDLPHA--------VANLPE-----------ADN-- 218 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l--------~~~~-------P~l~~~~~Dlp~v--------i~~a~~-----------~~r-- 218 (239)
.-+|+|+|||+|..+..+ .+++ |++++..-|+|.. ++..+. ..+
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 468999999999887765 4444 8999999999862 122111 001
Q ss_pred -eEEEEccCCC-CCCC--ceEEE
Q 046950 219 -LKYIAGDMFR-FIPP--ADAFL 237 (239)
Q Consensus 219 -i~~~~gD~f~-~~p~--~D~~~ 237 (239)
+.-++|.|+. .+|. +|+++
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~ 155 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFH 155 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEE
T ss_pred EEEecChhhhcccCCCcceEEEE
Confidence 5668899998 4664 88875
No 292
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=92.90 E-value=0.09 Score=43.69 Aligned_cols=67 Identities=16% Similarity=0.215 Sum_probs=42.9
Q ss_pred hhcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHh-cCC--C---CCCeEEEEc-cCCCCCCC-ceEEE
Q 046950 171 IFEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVA-NLP--E---ADNLKYIAG-DMFRFIPP-ADAFL 237 (239)
Q Consensus 171 ~~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~-~a~--~---~~ri~~~~g-D~f~~~p~-~D~~~ 237 (239)
.+.+..+|||+||+.|.++..+++..+-..++.+|+..... ... . .+-+.+..+ |++.-.+. +|+++
T Consensus 78 l~~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~~~~~~~~iv~~~~~~di~~l~~~~~DlVl 152 (300)
T 3eld_A 78 YLRITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIHMQTLGWNIVKFKDKSNVFTMPTEPSDTLL 152 (300)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCCCBTTGGGEEEECSCCTTTSCCCCCSEEE
T ss_pred CCCCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEeccccccccccccccCCceEEeecCceeeecCCCCcCEEe
Confidence 35667899999999999999999887766677788732110 100 0 122444444 66543333 88876
No 293
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=92.75 E-value=0.45 Score=37.28 Aligned_cols=53 Identities=15% Similarity=0.309 Sum_probs=35.9
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCC-------C--CCCeEEEEccCC
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLP-------E--ADNLKYIAGDMF 227 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~-------~--~~ri~~~~gD~f 227 (239)
..+.++||+||+| . +..+..+.|+-+++-+|. ++-.+.++ . .++|+++.||..
T Consensus 28 l~~a~~VLEiGtG--y-STl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~ 90 (202)
T 3cvo_A 28 YEEAEVILEYGSG--G-STVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIG 90 (202)
T ss_dssp HHHCSEEEEESCS--H-HHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCS
T ss_pred hhCCCEEEEECch--H-HHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCch
Confidence 4568899999985 3 444434456889999997 33333322 2 568999999954
No 294
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=92.45 E-value=0.16 Score=42.13 Aligned_cols=39 Identities=18% Similarity=0.100 Sum_probs=31.4
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCC
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLP 214 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~ 214 (239)
...+|||++||+|..+.++++. +.+++++|+ |..++.++
T Consensus 235 ~~~~vlD~f~GsGt~~~~a~~~--g~~~~g~e~~~~~~~~a~ 274 (297)
T 2zig_A 235 VGDVVLDPFAGTGTTLIAAARW--GRRALGVELVPRYAQLAK 274 (297)
T ss_dssp TTCEEEETTCTTTHHHHHHHHT--TCEEEEEESCHHHHHHHH
T ss_pred CCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHHHH
Confidence 4569999999999999998886 468999999 45555543
No 295
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=91.58 E-value=0.11 Score=45.04 Aligned_cols=63 Identities=14% Similarity=0.178 Sum_probs=43.1
Q ss_pred CCcEEEecCcchHHHHHHHHH-----------------CCCCeEEEeehHH-----------H-Hh----c-CCCCCC--
Q 046950 175 LGSLVDVGGGNGTFSRIISEA-----------------FPGIKCTVLDLPH-----------A-VA----N-LPEADN-- 218 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~-----------------~P~l~~~~~Dlp~-----------v-i~----~-a~~~~r-- 218 (239)
.-+|+|+||++|..+..+... .|+++++.-|+|. . .+ . ....+.
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 568999999999988777665 5889999999982 1 11 0 010112
Q ss_pred eEEEEccCCC-CCCC--ceEEE
Q 046950 219 LKYIAGDMFR-FIPP--ADAFL 237 (239)
Q Consensus 219 i~~~~gD~f~-~~p~--~D~~~ 237 (239)
+.-++|.|+. -+|. .|+++
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~ 154 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLH 154 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEE
T ss_pred EEecchhhhhccCCCCceEEEE
Confidence 4567888988 4664 78775
No 296
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=90.15 E-value=0.72 Score=38.09 Aligned_cols=66 Identities=17% Similarity=0.212 Sum_probs=46.4
Q ss_pred cCCCcEEEecCcchHHHHHHHHHC-----CCCeEEEeeh----HH---------------------------HHhc---C
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAF-----PGIKCTVLDL----PH---------------------------AVAN---L 213 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~-----P~l~~~~~Dl----p~---------------------------vi~~---a 213 (239)
..++.||++|...|..++.+++.. |+-+++++|. |+ +.++ +
T Consensus 105 ~~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~ 184 (282)
T 2wk1_A 105 NVPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNY 184 (282)
T ss_dssp TCCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHT
T ss_pred CCCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHc
Confidence 347799999999999988877654 5788999994 21 1111 1
Q ss_pred CC-CCCeEEEEccCCCC---CC-C-ceEEEe
Q 046950 214 PE-ADNLKYIAGDMFRF---IP-P-ADAFLF 238 (239)
Q Consensus 214 ~~-~~ri~~~~gD~f~~---~p-~-~D~~~l 238 (239)
.- .++|+++.||+.+- .| . +|++++
T Consensus 185 gl~~~~I~li~Gda~etL~~~~~~~~d~vfI 215 (282)
T 2wk1_A 185 DLLDEQVRFLPGWFKDTLPTAPIDTLAVLRM 215 (282)
T ss_dssp TCCSTTEEEEESCHHHHSTTCCCCCEEEEEE
T ss_pred CCCcCceEEEEeCHHHHHhhCCCCCEEEEEE
Confidence 11 38999999999763 33 2 788775
No 297
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=89.80 E-value=0.092 Score=39.56 Aligned_cols=51 Identities=10% Similarity=0.030 Sum_probs=35.4
Q ss_pred hcCCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCCC--CCCeEEEEccCCC-CC---C-C-ceEEEe
Q 046950 172 FEGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLPE--ADNLKYIAGDMFR-FI---P-P-ADAFLF 238 (239)
Q Consensus 172 ~~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~--~~ri~~~~gD~f~-~~---p-~-~D~~~l 238 (239)
.....+|+|||||. +.+|. +..++.+++ ..+++++.+|+.+ +. + . +|+|+.
T Consensus 10 ~~~g~~vL~~~~g~----------------v~vD~s~~ml~~a~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~~ 69 (176)
T 2ld4_A 10 ISAGQFVAVVWDKS----------------SPVEALKGLVDKLQALTGNEGRVSVENIKQLLQSAHKESSFDIILS 69 (176)
T ss_dssp CCTTSEEEEEECTT----------------SCHHHHHHHHHHHHHHTTTTSEEEEEEGGGGGGGCCCSSCEEEEEE
T ss_pred CCCCCEEEEecCCc----------------eeeeCCHHHHHHHHHhcccCcEEEEechhcCccccCCCCCEeEEEE
Confidence 45678999999996 23676 456665543 3358999999866 33 4 3 899875
No 298
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=88.43 E-value=0.66 Score=38.79 Aligned_cols=54 Identities=17% Similarity=0.317 Sum_probs=42.3
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCC-CCeEEEeehHHHHhcCC---------CCCCeEEEEccCCC
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFP-GIKCTVLDLPHAVANLP---------EADNLKYIAGDMFR 228 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P-~l~~~~~Dlp~vi~~a~---------~~~ri~~~~gD~f~ 228 (239)
.+.+.||++|||-=..+..+. .| +++++-+|.|.|++.-+ ..++..+++.|+.+
T Consensus 101 ~g~~QvV~LGaGlDTra~Rl~--~~~~~~v~evD~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d 164 (310)
T 2uyo_A 101 DGIRQFVILASGLDSRAYRLD--WPTGTTVYEIDQPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ 164 (310)
T ss_dssp TTCCEEEEETCTTCCHHHHSC--CCTTCEEEEEECHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS
T ss_pred hCCCeEEEeCCCCCchhhhcc--CCCCcEEEEcCCHHHHHHHHHHHHhcCCCCCCCeEEEecchHh
Confidence 456789999999888766654 35 48999999999987533 25679999999976
No 299
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=87.19 E-value=0.17 Score=43.32 Aligned_cols=64 Identities=20% Similarity=0.349 Sum_probs=42.0
Q ss_pred CCCcEEEecCcchHHHH--------HHHHH--------CCCCeEEEeehHH-----HHhcCCC---CCC---eEEEEccC
Q 046950 174 GLGSLVDVGGGNGTFSR--------IISEA--------FPGIKCTVLDLPH-----AVANLPE---ADN---LKYIAGDM 226 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~--------~l~~~--------~P~l~~~~~Dlp~-----vi~~a~~---~~r---i~~~~gD~ 226 (239)
..-+|+|+||++|..+. ++.++ .|+++++.-|||. +...... ..+ +.-++|.|
T Consensus 51 ~~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSF 130 (359)
T 1m6e_X 51 TRLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSF 130 (359)
T ss_dssp SEECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCS
T ss_pred CceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhh
Confidence 44689999999996543 33332 6888999999985 2222221 112 56688899
Q ss_pred CC-CCCC--ceEEE
Q 046950 227 FR-FIPP--ADAFL 237 (239)
Q Consensus 227 f~-~~p~--~D~~~ 237 (239)
+. .+|. .|+++
T Consensus 131 y~rlfp~~S~d~v~ 144 (359)
T 1m6e_X 131 YGRLFPRNTLHFIH 144 (359)
T ss_dssp SSCCSCTTCBSCEE
T ss_pred hhccCCCCceEEEE
Confidence 98 4664 77764
No 300
>3iht_A S-adenosyl-L-methionine methyl transferase; YP_165822.1, STR genomics, joint center for structural genomics, JCSG; HET: MSE SAM; 1.80A {Ruegeria pomeroyi dss-3}
Probab=86.21 E-value=3.3 Score=30.99 Aligned_cols=32 Identities=22% Similarity=0.367 Sum_probs=30.2
Q ss_pred CCcEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 175 LGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
..-|+|+|=|+|.-=-.|.+.+|+-++.|||.
T Consensus 41 ~GpVlElGLGNGRTydHLRe~~P~R~I~vfDR 72 (174)
T 3iht_A 41 SGPVYELGLGNGRTYHHLRQHVQGREIYVFER 72 (174)
T ss_dssp CSCEEEECCTTCHHHHHHHHHCCSSCEEEEES
T ss_pred CCceEEecCCCChhHHHHHHhCCCCcEEEEEe
Confidence 34699999999999999999999999999999
No 301
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=85.53 E-value=0.88 Score=39.53 Aligned_cols=37 Identities=11% Similarity=0.013 Sum_probs=31.1
Q ss_pred cCCCcEEEecCcchHHHHHHH-HHCCC-CeEEEeeh-HHH
Q 046950 173 EGLGSLVDVGGGNGTFSRIIS-EAFPG-IKCTVLDL-PHA 209 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~-~~~P~-l~~~~~Dl-p~v 209 (239)
.+..+|+|||++.|.++..++ +..|+ .+++.++- |..
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~ 264 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRIN 264 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHH
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHH
Confidence 456899999999999999988 67776 79999998 444
No 302
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=83.42 E-value=1.5 Score=37.85 Aligned_cols=37 Identities=16% Similarity=0.334 Sum_probs=28.3
Q ss_pred CCcEEEecCcchHHHHHHHHH---C----CCCeEEEeehHHHHh
Q 046950 175 LGSLVDVGGGNGTFSRIISEA---F----PGIKCTVLDLPHAVA 211 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~---~----P~l~~~~~Dlp~vi~ 211 (239)
.-+||++|+|+|.++.-+++. . ..+++.++|..+.+.
T Consensus 81 ~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr 124 (387)
T 1zkd_A 81 TLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLR 124 (387)
T ss_dssp SEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHH
T ss_pred CcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHH
Confidence 347999999999999888765 2 355889999855433
No 303
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=83.26 E-value=1.1 Score=36.88 Aligned_cols=63 Identities=14% Similarity=0.034 Sum_probs=48.9
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh-HHHHhcCC----CCCCeEEEEccCCC------CCC-CceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL-PHAVANLP----EADNLKYIAGDMFR------FIP-PADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~----~~~ri~~~~gD~f~------~~p-~~D~~~l 238 (239)
+...++|+=+|+|.+++++++ +.-+++.+|+ |..++..+ ..+|++++..|.++ +.+ .+|+|++
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS--~~d~~vfvE~~~~a~~~L~~Nl~~~~~~~V~~~D~~~~L~~l~~~~~~fdLVfi 165 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR--SQDRLYLCELHPTEYNFLLKLPHFNKKVYVNHTDGVSKLNALLPPPEKRGLIFI 165 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC--TTSEEEEECCSHHHHHHHTTSCCTTSCEEEECSCHHHHHHHHCSCTTSCEEEEE
T ss_pred cCCCceeEeCCcHHHHHHHcC--CCCeEEEEeCCHHHHHHHHHHhCcCCcEEEEeCcHHHHHHHhcCCCCCccEEEE
Confidence 356789999999999999999 5578999999 55555443 35789999999776 222 2999986
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=81.72 E-value=2.1 Score=34.55 Aligned_cols=38 Identities=18% Similarity=0.149 Sum_probs=30.6
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehH-HHHhc
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLP-HAVAN 212 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp-~vi~~ 212 (239)
.....|||..||+|..+.+..+. +-+++++|+. ..++.
T Consensus 211 ~~~~~vlD~f~GsGtt~~~a~~~--gr~~ig~e~~~~~~~~ 249 (260)
T 1g60_A 211 NPNDLVLDCFMGSGTTAIVAKKL--GRNFIGCDMNAEYVNQ 249 (260)
T ss_dssp CTTCEEEESSCTTCHHHHHHHHT--TCEEEEEESCHHHHHH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCeEEEEeCCHHHHHH
Confidence 34579999999999999998887 5689999994 44443
No 305
>2heo_A Z-DNA binding protein 1; protein DLM1-Z-DNA complex, immune system-DNA complex; 1.70A {Mus musculus} PDB: 1j75_A
Probab=81.54 E-value=0.9 Score=28.65 Aligned_cols=41 Identities=10% Similarity=0.240 Sum_probs=28.8
Q ss_pred HhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccC
Q 046950 37 ELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLT 81 (239)
Q Consensus 37 ~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t 81 (239)
+..|++.|..++.|++..| ++..|...|++.... .+.|.++
T Consensus 12 ~~~IL~~L~~~~~~~s~~eLA~~lglsr~tv~~~l~~L~~~G~I~~~~----~G~y~lg 66 (67)
T 2heo_A 12 EQKILQVLSDDGGPVAIFQLVKKCQVPKKTLNQVLYRLKKEDRVSSPS----PKYWSIG 66 (67)
T ss_dssp HHHHHHHHHHHCSCEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEEEEE----TTEEEEC
T ss_pred HHHHHHHHHHcCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCcEecCC----CceEeeC
Confidence 4456777765445677766 788889999988754 5778754
No 306
>3mq0_A Transcriptional repressor of the blcabc operon; helix-turn-helix, GAF fold, transcription repressor; 1.79A {Agrobacterium tumefaciens}
Probab=79.88 E-value=0.91 Score=37.16 Aligned_cols=45 Identities=16% Similarity=0.312 Sum_probs=35.3
Q ss_pred HhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccCcccc
Q 046950 37 ELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLTAAST 85 (239)
Q Consensus 37 ~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t~~s~ 85 (239)
-+.|++.|...++++++.| +|+-|...|++.++. +++|.+++..-
T Consensus 32 al~IL~~l~~~~~~ltl~eia~~lgl~ksTv~RlL~tL~~~G~v~~~~----~~~Y~LG~~~~ 90 (275)
T 3mq0_A 32 AVRILDLVAGSPRDLTAAELTRFLDLPKSSAHGLLAVMTELDLLARSA----DGTLRIGPHSL 90 (275)
T ss_dssp HHHHHHHHHHCSSCEEHHHHHHHHTCC--CHHHHHHHHHHTTSEEECT----TSEEEECTHHH
T ss_pred HHHHHHHHhhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEECC----CCcEEehHHHH
Confidence 3457888877656788887 888999999999985 57899987543
No 307
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=75.58 E-value=3.1 Score=37.37 Aligned_cols=65 Identities=14% Similarity=-0.032 Sum_probs=42.4
Q ss_pred CCCcEEEecCcchHHHHHHHHHC-------------CCCeEEEeeh-HHHHhcCCC------CCCeEEEEccCCC-C---
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAF-------------PGIKCTVLDL-PHAVANLPE------ADNLKYIAGDMFR-F--- 229 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~-------------P~l~~~~~Dl-p~vi~~a~~------~~ri~~~~gD~f~-~--- 229 (239)
...+|+|-.||+|.++.+..++. .+..+.++|+ |.+...++. .+.-++..+|.+. +
T Consensus 217 ~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl~lhg~~~~~I~~~dtL~~~~~~ 296 (530)
T 3ufb_A 217 LGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNLLLHGLEYPRIDPENSLRFPLRE 296 (530)
T ss_dssp TTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHHHHHTCSCCEEECSCTTCSCGGG
T ss_pred CCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHHHhcCCccccccccccccCchhh
Confidence 34689999999999998776532 2346888998 444443331 2334567888775 2
Q ss_pred -CC--CceEEEe
Q 046950 230 -IP--PADAFLF 238 (239)
Q Consensus 230 -~p--~~D~~~l 238 (239)
.+ .+|+|+.
T Consensus 297 ~~~~~~fD~Il~ 308 (530)
T 3ufb_A 297 MGDKDRVDVILT 308 (530)
T ss_dssp CCGGGCBSEEEE
T ss_pred hcccccceEEEe
Confidence 12 2898874
No 308
>3iei_A Leucine carboxyl methyltransferase 1; LCMT-1, S-adenosyl-L-methionine; HET: SAH MES; 1.90A {Homo sapiens} PDB: 3p71_T* 3mnt_A* 3o7w_A*
Probab=74.85 E-value=8.6 Score=32.33 Aligned_cols=81 Identities=15% Similarity=0.176 Sum_probs=54.7
Q ss_pred HHHHHHHhhchhhhHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHH-CCCCeEEEeehHHHHhcC----C------
Q 046950 146 QRFNEAMASDSEIMTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEA-FPGIKCTVLDLPHAVANL----P------ 214 (239)
Q Consensus 146 ~~f~~~m~~~~~~~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~-~P~l~~~~~Dlp~vi~~a----~------ 214 (239)
...++++...+... ..++ ..+-....+.+.||-+|||.=...-.+... .++++++=+|+|+|++.= +
T Consensus 64 P~inrG~~~Rt~~i-D~~v-~~fl~~~~~~~QVV~LGaGlDTr~~RL~~~~~~~~~~~EVD~P~vi~~K~~~l~~~~~l~ 141 (334)
T 3iei_A 64 PEINRGYFARVHGV-SQLI-KAFLRKTECHCQIVNLGAGMDTTFWRLKDEDLLSSKYFEVDFPMIVTRKLHSIKCKPPLS 141 (334)
T ss_dssp HHHHHHHHHHHHHH-HHHH-HHHHHHTTTCSEEEEETCTTCCHHHHHHHTTCCCSEEEEEECHHHHHHHHHHHHHCHHHH
T ss_pred chHHHHHHHHHHHH-HHHH-HHHHHhCCCCCEEEEeCCCcCchHHHhcCCCCCCCeEEECCcHHHHHHHHHHHhhchhhh
Confidence 34455554444332 3334 333212235679999999999998888875 468999999999987620 0
Q ss_pred -------------------CCCCeEEEEccCCC
Q 046950 215 -------------------EADNLKYIAGDMFR 228 (239)
Q Consensus 215 -------------------~~~ri~~~~gD~f~ 228 (239)
..++..+++.|+.+
T Consensus 142 ~~lg~~~~~~~~~~~~~~l~s~~y~~v~~DL~d 174 (334)
T 3iei_A 142 SPILELHSEDTLQMDGHILDSKRYAVIGADLRD 174 (334)
T ss_dssp HHHHHHSSSSSCBCCTTEEECSSEEEEECCTTC
T ss_pred hhhcccccccccccccccCCCCceEEEcccccc
Confidence 15789999999976
No 309
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=73.96 E-value=3.3 Score=35.17 Aligned_cols=32 Identities=34% Similarity=0.458 Sum_probs=27.2
Q ss_pred CCcEEEecCcchHHHHH--HHHHCCCCeEEEeeh
Q 046950 175 LGSLVDVGGGNGTFSRI--ISEAFPGIKCTVLDL 206 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~--l~~~~P~l~~~~~Dl 206 (239)
.++||=||||.+.+..+ |++..|+++++++|-
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~ 35 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEP 35 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeC
Confidence 47899999999877554 788889999999995
No 310
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=73.95 E-value=5.5 Score=34.83 Aligned_cols=57 Identities=19% Similarity=0.358 Sum_probs=36.7
Q ss_pred CchHHHHHHHHHhhchhhhHHHHHHHhhhhhhcCCCcEEEecCcchHHHHHHHHHCC-----CCeEEEeehH
Q 046950 141 NPAINQRFNEAMASDSEIMTTFVVKSECKQIFEGLGSLVDVGGGNGTFSRIISEAFP-----GIKCTVLDLP 207 (239)
Q Consensus 141 ~~~~~~~f~~~m~~~~~~~~~~~l~~~~~~~~~~~~~vvDVGGG~G~~~~~l~~~~P-----~l~~~~~Dlp 207 (239)
.|++...|.+..+. +++ +.+. ..+.-+||++|+|+|.++.-+++... ..++.+++..
T Consensus 114 APeiS~~FGe~la~-------~~~-~~~~--~~g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~S 175 (432)
T 4f3n_A 114 APELSPLFAQTLAR-------PVA-QALD--ASGTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLS 175 (432)
T ss_dssp CGGGHHHHHHHHHH-------HHH-HHHH--HHTCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTT
T ss_pred chhhhHHHHHHHHH-------HHH-HHHH--hcCCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcC
Confidence 56677777665432 222 2222 22356899999999999888776432 2368888883
No 311
>1y0u_A Arsenical resistance operon repressor, putative; structural genomics, protein structure initiative, PSI; HET: MSE; 1.60A {Archaeoglobus fulgidus} SCOP: a.4.5.5
Probab=73.46 E-value=3.2 Score=27.69 Aligned_cols=47 Identities=15% Similarity=0.294 Sum_probs=34.6
Q ss_pred HHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccCcccc
Q 046950 31 SLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLTAAST 85 (239)
Q Consensus 31 ~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t~~s~ 85 (239)
+|..-.++.|+..| . ++.++.+ .|+.|...|++.+.. +.|.+++.++
T Consensus 27 ~l~~~~r~~Il~~L-~--~~~~~~eLa~~l~is~~tv~~~L~~L~~~Glv~~~~-----g~y~l~~~g~ 87 (96)
T 1y0u_A 27 AVTNPVRRKILRML-D--KGRSEEEIMQTLSLSKKQLDYHLKVLEAGFCIERVG-----ERWVVTDAGK 87 (96)
T ss_dssp HHSCHHHHHHHHHH-H--TTCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEET-----TEEEECTTTC
T ss_pred HhCCHHHHHHHHHH-c--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEC-----CEEEECCCch
Confidence 44445566788888 5 5777777 788899999999873 5788887654
No 312
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=72.97 E-value=3.4 Score=34.44 Aligned_cols=58 Identities=17% Similarity=0.197 Sum_probs=40.1
Q ss_pred cCCCcEEEecC------cchHHHHHHHHHCCC-CeEEEeehHHHHhcCCCCCCeEEEEccCCCC-CCC-ceEEE
Q 046950 173 EGLGSLVDVGG------GNGTFSRIISEAFPG-IKCTVLDLPHAVANLPEADNLKYIAGDMFRF-IPP-ADAFL 237 (239)
Q Consensus 173 ~~~~~vvDVGG------G~G~~~~~l~~~~P~-l~~~~~Dlp~vi~~a~~~~ri~~~~gD~f~~-~p~-~D~~~ 237 (239)
+-..+|+|+|. ..|. ..+.+..|+ ..++..|+-+....+. .++.||+.+. ... +|+|+
T Consensus 108 p~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~sda~-----~~IqGD~~~~~~~~k~DLVI 174 (344)
T 3r24_A 108 PYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVSDAD-----STLIGDCATVHTANKWDLII 174 (344)
T ss_dssp CTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBCSSS-----EEEESCGGGEEESSCEEEEE
T ss_pred cCCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCcccccCCC-----eEEEccccccccCCCCCEEE
Confidence 34679999995 6676 355566887 6999999976544322 4599998663 223 88886
No 313
>3mag_A VP39; methylated adenine, methyltransferase, RNA CAP analog, poly (A) polymerase, mRNA processing, transcription; HET: SAH 3MA; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1bky_A* 1jsz_A* 1v39_A* 1p39_A* 1vp9_A* 2vp3_A* 1eam_A* 1jte_A* 1jtf_A* 4dcg_A* 3mct_A* 1b42_A* 1eqa_A* 1av6_A* 3er9_A* 2gaf_A 3er8_A 2ga9_A* 3erc_A*
Probab=72.93 E-value=2.1 Score=35.39 Aligned_cols=51 Identities=22% Similarity=0.307 Sum_probs=36.3
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCC----CeEEEeehHHHHhcCCCCCCeEEEEc
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPG----IKCTVLDLPHAVANLPEADNLKYIAG 224 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~----l~~~~~Dlp~vi~~a~~~~ri~~~~g 224 (239)
++..||=||+|.|..+.-|.+.+|+ ++.+++|-..-.........|+.+..
T Consensus 60 ~~~~VVYVGSApG~HL~~L~~~fp~~f~~ikWvLiDPap~~~~l~~~~NV~li~~ 114 (307)
T 3mag_A 60 DGATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTLVTR 114 (307)
T ss_dssp TTCEEEEESCCSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEEEEC
T ss_pred CCcEEEEecccCccHHHHHHHhchhhCCCeEEEEEcCCcchhhhcCCCcEEEEec
Confidence 3569999999999999999998886 69999996221111122455665554
No 314
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=70.85 E-value=8.3 Score=27.30 Aligned_cols=60 Identities=13% Similarity=0.146 Sum_probs=37.4
Q ss_pred CcEEEecCcchHHHHHHHHHC--CCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCCC-------CCCceEEEe
Q 046950 176 GSLVDVGGGNGTFSRIISEAF--PGIKCTVLDL-PHAVANLPEADNLKYIAGDMFRF-------IPPADAFLF 238 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~--P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~~-------~p~~D~~~l 238 (239)
++++=+|+|. ++..+++.. -+.+++++|. |+.++.+. ..++.++.+|..++ ...+|+++.
T Consensus 7 ~~v~I~G~G~--iG~~la~~L~~~g~~V~~id~~~~~~~~~~-~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 7 YEYIVIGSEA--AGVGLVRELTAAGKKVLAVDKSKEKIELLE-DEGFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CSEEEECCSH--HHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CEEEEECCCH--HHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HCCCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 5788898854 444443322 2568999998 45555443 23578889998763 223787764
No 315
>2xrn_A HTH-type transcriptional regulator TTGV; DNA-binding protein, tetramer gene regulator, cooperative DN binding, multidrug binding protein; 2.90A {Pseudomonas putida} PDB: 2xro_A
Probab=70.03 E-value=2.4 Score=33.76 Aligned_cols=47 Identities=17% Similarity=0.183 Sum_probs=34.2
Q ss_pred hChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccCcccccc
Q 046950 38 LGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLTAASTLL 87 (239)
Q Consensus 38 lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t~~s~~l 87 (239)
+.|++.|...++++++.| +|+.|...|++.+... +++|.+++....|
T Consensus 9 l~iL~~l~~~~~~~s~~ela~~~gl~~stv~r~l~~L~~~G~v~~~~~---~~~Y~lg~~~~~l 69 (241)
T 2xrn_A 9 ASIMRALGSHPHGLSLAAIAQLVGLPRSTVQRIINALEEEFLVEALGP---AGGFRLGPALGQL 69 (241)
T ss_dssp HHHHHHHHTCTTCEEHHHHHHHTTSCHHHHHHHHHHHHTTTSEEECGG---GCEEEECSHHHHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCC---CCeEEECHHHHHH
Confidence 456677766545677777 8889999999999752 4789998755433
No 316
>3b73_A PHIH1 repressor-like protein; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 2.12A {Haloarcula marismortui atcc 43049}
Probab=69.56 E-value=3.2 Score=29.04 Aligned_cols=31 Identities=10% Similarity=0.196 Sum_probs=25.3
Q ss_pred HHHHHHhCCceeeeccCCCccccccCccccccccC
Q 046950 56 LMRLLVHSGCFKKTKVNGEEEAYGLTAASTLLIKD 90 (239)
Q Consensus 56 lLr~L~~~g~l~~~~~~~~~~~y~~t~~s~~l~~~ 90 (239)
-|+.|...|+++... .+.|.+|+.++.+...
T Consensus 49 rL~~Le~~GLV~~~~----rg~Y~LT~~G~~~l~~ 79 (111)
T 3b73_A 49 RLKKLADHDLLQPLA----NGVYVITEEGEAYLNG 79 (111)
T ss_dssp HHHHHHHTTSEEECS----TTCEEECHHHHHHHTT
T ss_pred HHHHHHHCCCEEecC----CceEEECchHHHHHHH
Confidence 788999999999875 4689999999855443
No 317
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=69.48 E-value=6.9 Score=27.93 Aligned_cols=61 Identities=18% Similarity=0.201 Sum_probs=39.7
Q ss_pred CcEEEecCcc-hHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCCC-------CCCceEEEe
Q 046950 176 GSLVDVGGGN-GTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFRF-------IPPADAFLF 238 (239)
Q Consensus 176 ~~vvDVGGG~-G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~~-------~p~~D~~~l 238 (239)
.+++=+|+|. |..+...+++ -+.+++++|. |+.++.++ ..++..+.||..++ ...+|+++.
T Consensus 8 ~~viIiG~G~~G~~la~~L~~-~g~~v~vid~~~~~~~~~~-~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 8 NHALLVGYGRVGSLLGEKLLA-SDIPLVVIETSRTRVDELR-ERGVRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp SCEEEECCSHHHHHHHHHHHH-TTCCEEEEESCHHHHHHHH-HTTCEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCEEEECcCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHH-HcCCCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 5788899865 5444444444 3568999998 55666554 24678899998663 123787764
No 318
>3r4k_A Transcriptional regulator, ICLR family; DNA/RNA-binding 3-helical bundle, profilin-like, structural joint center for structural genomics, JCSG; 2.46A {Ruegeria SP}
Probab=68.77 E-value=1.5 Score=35.46 Aligned_cols=46 Identities=22% Similarity=0.260 Sum_probs=35.1
Q ss_pred hChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccCccccc
Q 046950 38 LGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLTAASTL 86 (239)
Q Consensus 38 lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t~~s~~ 86 (239)
+.|++.|...++++|+.| +|+-|...|++.++.. .++|.+++..-.
T Consensus 9 l~IL~~l~~~~~~lsl~eia~~lgl~ksT~~RlL~tL~~~G~v~~~~~---~~~Y~lG~~~~~ 68 (260)
T 3r4k_A 9 LTLLTYFNHGRLEIGLSDLTRLSGMNKATVYRLMSELQEAGFVEQVEG---ARSYRLGPQVLR 68 (260)
T ss_dssp HHHHTTCBTTBSEEEHHHHHHHHCSCHHHHHHHHHHHHHTTSEEECSS---SSEEEECTTHHH
T ss_pred HHHHHHHhhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEcCC---CCcEEcCHHHHH
Confidence 457788876446788888 8888999999999862 478999875443
No 319
>1mkm_A ICLR transcriptional regulator; structural genomics, winged helix-turn-helix, PSI, protein structure initiative; 2.20A {Thermotoga maritima} SCOP: a.4.5.33 d.110.2.2
Probab=68.08 E-value=4 Score=32.58 Aligned_cols=43 Identities=23% Similarity=0.300 Sum_probs=32.8
Q ss_pred hChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccCccc
Q 046950 38 LGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLTAAS 84 (239)
Q Consensus 38 lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t~~s 84 (239)
+.|++.|...++++++.| +|+.|...|++.+.. .++|.+++..
T Consensus 11 l~iL~~l~~~~~~~~~~ela~~~gl~~stv~r~l~~L~~~G~v~~~~----~~~Y~lg~~~ 67 (249)
T 1mkm_A 11 FEILDFIVKNPGDVSVSEIAEKFNMSVSNAYKYMVVLEEKGFVLRKK----DKRYVPGYKL 67 (249)
T ss_dssp HHHHHHHHHCSSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECT----TSCEEECTHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCcEEECC----CCcEEECHHH
Confidence 456777766545788877 788899999999873 5789998754
No 320
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=63.96 E-value=6.8 Score=33.80 Aligned_cols=31 Identities=26% Similarity=0.483 Sum_probs=26.2
Q ss_pred CcEEEecCcchHH--HHHHHHHCCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTF--SRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~--~~~l~~~~P~l~~~~~Dl 206 (239)
++||=||||.|.+ +..|.+..|+.+++++|-
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~~VtlI~~ 35 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCCeEEEEcC
Confidence 5799999999876 446778889999999985
No 321
>2fu4_A Ferric uptake regulation protein; DNA binding domain, helix-turn-helix, DNA binding protein; 1.80A {Escherichia coli}
Probab=61.93 E-value=4 Score=26.33 Aligned_cols=15 Identities=7% Similarity=0.286 Sum_probs=13.0
Q ss_pred HHHHHHhCCceeeec
Q 046950 56 LMRLLVHSGCFKKTK 70 (239)
Q Consensus 56 lLr~L~~~g~l~~~~ 70 (239)
.|+.|...|++.+..
T Consensus 58 ~L~~L~~~Glv~~~~ 72 (83)
T 2fu4_A 58 VLNQFDDAGIVTRHN 72 (83)
T ss_dssp HHHHHHHHTSEEEEE
T ss_pred HHHHHHHCCCeEEEe
Confidence 788899999999875
No 322
>3ech_A MEXR, multidrug resistance operon repressor; winged helix, helix-turn-helix, protein-peptide complex; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.28 PDB: 1lnw_A 3mex_A
Probab=61.88 E-value=19 Score=25.28 Aligned_cols=54 Identities=13% Similarity=0.184 Sum_probs=34.0
Q ss_pred HHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccC-C-CccccccCccccccc
Q 046950 34 CAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVN-G-EEEAYGLTAASTLLI 88 (239)
Q Consensus 34 ~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~-~-~~~~y~~t~~s~~l~ 88 (239)
+..++.++..|... ++.|..+ +++-|...|++++.... + ..-.+.+|+.++.+.
T Consensus 36 t~~~~~vL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~L~~~Glv~r~~~~~DrR~~~~~LT~~G~~~~ 105 (142)
T 3ech_A 36 TPPDVHVLKLIDEQ-RGLNLQDLGRQMCRDKALITRKIRELEGRNLVRRERNPSDQRSFQLFLTDEGLAIH 105 (142)
T ss_dssp CHHHHHHHHHHHHT-TTCCHHHHHHHHC---CHHHHHHHHHHHTTSEEC----------CCEECHHHHHHH
T ss_pred CHHHHHHHHHHHhC-CCcCHHHHHHHhCCCHHHHHHHHHHHHHCCCEeeccCCCCCCeeeeEECHHHHHHH
Confidence 35667788888775 5788777 88899999999986420 0 111356676666444
No 323
>2g7u_A Transcriptional regulator; ICLR family, structural genomics, PSI, protein structure initiative, midwest center for struc genomics; 2.30A {Rhodococcus SP}
Probab=61.43 E-value=4.3 Score=32.62 Aligned_cols=46 Identities=15% Similarity=0.157 Sum_probs=33.9
Q ss_pred hChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccCccccccc
Q 046950 38 LGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLTAASTLLI 88 (239)
Q Consensus 38 lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t~~s~~l~ 88 (239)
+.|++.|...++++++.| +|+.|...|++.++ +++|.+++....|.
T Consensus 17 l~iL~~l~~~~~~~~~~eia~~~gl~~stv~r~l~~L~~~G~v~~~-----~~~Y~Lg~~~~~l~ 76 (257)
T 2g7u_A 17 FAVLLAFDAQRPNPTLAELATEAGLSRPAVRRILLTLQKLGYVAGS-----GGRWSLTPRVLSIG 76 (257)
T ss_dssp HHHHHTCSSSCSSCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEE-----TTEEEECGGGHHHH
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeC-----CCEEEEcHHHHHHH
Confidence 456677765446788877 78888999999987 47899988654333
No 324
>2o0y_A Transcriptional regulator; ICLR-family, structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.00A {Rhodococcus SP}
Probab=60.99 E-value=4.2 Score=32.75 Aligned_cols=43 Identities=12% Similarity=0.291 Sum_probs=32.3
Q ss_pred hChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccCccc
Q 046950 38 LGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLTAAS 84 (239)
Q Consensus 38 lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t~~s 84 (239)
+.|++.|...++++++.| +|+.|...|++.++. .++|.+++..
T Consensus 26 l~iL~~l~~~~~~~~~~eia~~~gl~kstv~r~l~tL~~~G~v~~~~----~~~Y~lg~~~ 82 (260)
T 2o0y_A 26 IDLLELFDAAHPTRSLKELVEGTKLPKTTVVRLVATMCARSVLTSRA----DGSYSLGPEM 82 (260)
T ss_dssp HHHHTTCBTTBSSBCHHHHHHHHCCCHHHHHHHHHHHHHTTSEEECT----TSCEEECHHH
T ss_pred HHHHHHHhhCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEECC----CCeEEecHHH
Confidence 456777764336888888 788889999999985 3489998744
No 325
>4a5n_A Uncharacterized HTH-type transcriptional regulato; activator, DNA binding, MARR-like; 1.81A {Bacillus subtilis} PDB: 4a5m_A
Probab=57.54 E-value=15 Score=26.23 Aligned_cols=75 Identities=15% Similarity=0.067 Sum_probs=50.3
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHHhC--hhhHhhhCCCCCCHH---HHHHHHHhCCceeeeccCC--CccccccCccccc
Q 046950 14 QGQAQLYKLMFNHLSSMSLKCAIELG--IADIIHSHGRAITLS---ELMRLLVHSGCFKKTKVNG--EEEAYGLTAASTL 86 (239)
Q Consensus 14 ~~~~~l~~~~~g~~~~~~L~~a~~lg--lfd~L~~~~~~~t~~---elLr~L~~~g~l~~~~~~~--~~~~y~~t~~s~~ 86 (239)
=+....++++.+-|...+|.... .| =|..|.+.-..+|.. ..|+-|...|+|++..... ..-.|.+|+.++.
T Consensus 14 Cpi~~~l~~lg~kW~l~IL~~L~-~g~~rf~eL~~~l~gIs~~~Ls~~L~~Le~~GLV~R~~~~~d~r~v~y~LT~~G~~ 92 (131)
T 4a5n_A 14 SPVEFTLDVIGGKWKGILFYHMI-DGKKRFNEFRRICPSITQRMLTLQLRELEADGIVHREVYHQVPPKVEYSLTEFGRT 92 (131)
T ss_dssp CHHHHHHHHHCSSSHHHHHHHHT-TSCBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECTTGGG
T ss_pred CcHHHHHHHHcCcCHHHHHHHHh-cCCcCHHHHHHHhcccCHHHHHHHHHHHHHCCCEEEEecCCCCCeEEEEECHhHHH
Confidence 46788889998999888887764 33 255555431133333 3899999999999875210 0125889988886
Q ss_pred ccc
Q 046950 87 LIK 89 (239)
Q Consensus 87 l~~ 89 (239)
+.+
T Consensus 93 l~~ 95 (131)
T 4a5n_A 93 LEP 95 (131)
T ss_dssp GHH
T ss_pred HHH
Confidence 664
No 326
>2oqg_A Possible transcriptional regulator, ARSR family P; winged-helix-turn-helix, structural genomics, PSI-2, protein structure initiative; 1.54A {Rhodococcus SP}
Probab=56.20 E-value=7.7 Score=26.37 Aligned_cols=44 Identities=16% Similarity=0.117 Sum_probs=29.3
Q ss_pred HHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccc---cccCccc
Q 046950 35 AIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEA---YGLTAAS 84 (239)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~---y~~t~~s 84 (239)
-.++.|+..|.. ++.++.+ .|+.|...|++.+.. .++ |.+|+.+
T Consensus 21 ~~r~~IL~~L~~--~~~~~~ela~~l~is~~tv~~~l~~L~~~gli~~~~----~gr~~~y~l~~~~ 81 (114)
T 2oqg_A 21 ETRWEILTELGR--ADQSASSLATRLPVSRQAIAKHLNALQACGLVESVK----VGREIRYRALGAE 81 (114)
T ss_dssp HHHHHHHHHHHH--SCBCHHHHHHHSSSCHHHHHHHHHHHHHTTSEEEEE----ETTEEEEEECSHH
T ss_pred hHHHHHHHHHHc--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeeEEe----cCCEEEEEechHH
Confidence 345556666633 5667666 788899999998764 233 6666644
No 327
>3mwm_A ZUR, putative metal uptake regulation protein; FUR, regulatory metal, graded transcription regulation, transcription; 2.40A {Streptomyces coelicolor}
Probab=56.09 E-value=10 Score=27.33 Aligned_cols=26 Identities=15% Similarity=0.213 Sum_probs=17.5
Q ss_pred HHHHHHhCCceeeeccCCCccccccC
Q 046950 56 LMRLLVHSGCFKKTKVNGEEEAYGLT 81 (239)
Q Consensus 56 lLr~L~~~g~l~~~~~~~~~~~y~~t 81 (239)
.|+.|...|++.+...+++..+|...
T Consensus 54 ~L~~L~e~Glv~~~~~~~g~~~Y~~~ 79 (139)
T 3mwm_A 54 TLQSLADAGEVDVLRTAEGESVYRRC 79 (139)
T ss_dssp HHHHHHHTTSSEEEECTTSCEEEECC
T ss_pred HHHHHHHCCCEEEEEcCCCceEEEEC
Confidence 78899999999987531223356543
No 328
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=55.99 E-value=20 Score=24.84 Aligned_cols=61 Identities=16% Similarity=0.274 Sum_probs=34.9
Q ss_pred CcEEEecCcchHHHHHHHHHC--CCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCCC-------CCCceEEEe
Q 046950 176 GSLVDVGGGNGTFSRIISEAF--PGIKCTVLDL-PHAVANLPEADNLKYIAGDMFRF-------IPPADAFLF 238 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~--P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~~-------~p~~D~~~l 238 (239)
.+|+=+|+| ..+..+++.. -+.+++++|. ++.++.+....++.++.+|..++ ...+|+++.
T Consensus 5 m~i~IiG~G--~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 5 MYIIIAGIG--RVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp CEEEEECCS--HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CEEEEECCC--HHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 467788764 4444333322 2467889998 44444333222566777886542 234788764
No 329
>2ia2_A Putative transcriptional regulator; SAD, PSI-2, structural genomics, structure initiative, midwest center for structural genomic transcription; 2.10A {Rhodococcus SP}
Probab=55.46 E-value=4.7 Score=32.55 Aligned_cols=45 Identities=24% Similarity=0.286 Sum_probs=33.2
Q ss_pred hChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccCcccccc
Q 046950 38 LGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLTAASTLL 87 (239)
Q Consensus 38 lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t~~s~~l 87 (239)
+.|++.|...++++++.| +|+.|...|++.++ +++|.+++..-.|
T Consensus 24 l~iL~~l~~~~~~~~~~eia~~~gl~~stv~r~l~tL~~~G~v~~~-----~~~Y~Lg~~~~~l 82 (265)
T 2ia2_A 24 LAVIRCFDHRNQRRTLSDVARATDLTRATARRFLLTLVELGYVATD-----GSAFWLTPRVLEL 82 (265)
T ss_dssp HHHHHTCCSSCSSEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEES-----SSEEEECGGGGGT
T ss_pred HHHHHHHHhCCCCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEec-----CCEEEEcHHHHHH
Confidence 456777765446788887 78888999999987 4789998754433
No 330
>2o03_A Probable zinc uptake regulation protein FURB; DNA-binding, helix-turn-helix, zinc binding, GE regulation; 2.70A {Mycobacterium tuberculosis}
Probab=53.79 E-value=13 Score=26.38 Aligned_cols=25 Identities=16% Similarity=0.264 Sum_probs=17.0
Q ss_pred HHHHHHhCCceeeeccCCCcccccc
Q 046950 56 LMRLLVHSGCFKKTKVNGEEEAYGL 80 (239)
Q Consensus 56 lLr~L~~~g~l~~~~~~~~~~~y~~ 80 (239)
.|+.|...|++.+....++..+|..
T Consensus 51 ~L~~L~e~Glv~~~~~~~~~~~y~~ 75 (131)
T 2o03_A 51 TLQSMASSGLVDTLHTDTGESVYRR 75 (131)
T ss_dssp HHHHHHTTTSEEEEECTTSCEEEEE
T ss_pred HHHHHHHCCCEEEEEeCCCceEEEe
Confidence 7889999999998753222234543
No 331
>2fe3_A Peroxide operon regulator; oxidative stress regulator, DNA binding protein; 1.75A {Bacillus subtilis} PDB: 3f8n_A 2rgv_A*
Probab=53.75 E-value=13 Score=26.88 Aligned_cols=25 Identities=16% Similarity=0.317 Sum_probs=17.1
Q ss_pred HHHHHHhCCceeeeccCCCcccccc
Q 046950 56 LMRLLVHSGCFKKTKVNGEEEAYGL 80 (239)
Q Consensus 56 lLr~L~~~g~l~~~~~~~~~~~y~~ 80 (239)
.|+.|...|++.+....++..+|..
T Consensus 62 ~L~~L~e~Glv~~~~~~~~~~~Y~~ 86 (145)
T 2fe3_A 62 NLRVFRESGLVKELTYGDASSRFDF 86 (145)
T ss_dssp HHHHHHHTTSEEEECCTTSCCEEEE
T ss_pred HHHHHHHCCCEEEEeeCCCceEEEC
Confidence 7889999999998753112234654
No 332
>1u2w_A CADC repressor, cadmium efflux system accessory protein; LEAD, SOFT metal ION resistance, ARSR/SM family, DNA binding protein; 1.90A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 3f72_A
Probab=53.18 E-value=11 Score=26.27 Aligned_cols=41 Identities=12% Similarity=0.146 Sum_probs=29.1
Q ss_pred HHHHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeec
Q 046950 29 SMSLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTK 70 (239)
Q Consensus 29 ~~~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~ 70 (239)
..+|.--.++.|+..|... ++.++.+ .|+.|...|++....
T Consensus 36 ~~al~~~~rl~IL~~L~~~-~~~s~~eLa~~l~is~stvs~~L~~L~~~Glv~~~~ 90 (122)
T 1u2w_A 36 LKAIADENRAKITYALCQD-EELCVCDIANILGVTIANASHHLRTLYKQGVVNFRK 90 (122)
T ss_dssp HHHHHSHHHHHHHHHHHHS-SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEC-
T ss_pred HHHhCCHHHHHHHHHHHHC-CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEE
Confidence 3444445677788888754 5777776 788889999998764
No 333
>3fm5_A Transcriptional regulator; MCSG, PF04017, PSI, MARR, structu genomics, protein structure initiative, midwest center for structural genomics; HET: GOL; 2.00A {Rhodococcus jostii}
Probab=53.15 E-value=21 Score=25.37 Aligned_cols=54 Identities=11% Similarity=0.075 Sum_probs=32.0
Q ss_pred HHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCC--CccccccCccccccc
Q 046950 35 AIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNG--EEEAYGLTAASTLLI 88 (239)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~--~~~~y~~t~~s~~l~ 88 (239)
..++.++..|...++++|..+ +++-|...|++++..... ..-.+.+|+.++.+.
T Consensus 39 ~~q~~vL~~l~~~~~~~t~~eLa~~l~i~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 108 (150)
T 3fm5_A 39 VRSYSVLVLACEQAEGVNQRGVAATMGLDPSQIVGLVDELEERGLVVRTLDPSDRRNKLIAATEEGRRLR 108 (150)
T ss_dssp HHHHHHHHHHHHSTTCCCSHHHHHHHTCCHHHHHHHHHHHHTTTSEEC-----------CEECHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCcCHHHHHHHHCCCHhHHHHHHHHHHHCCCEEeeCCccccchheeeECHHHHHHH
Confidence 445667777765445666666 788999999999864200 011266777776544
No 334
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=52.84 E-value=49 Score=23.61 Aligned_cols=64 Identities=20% Similarity=0.171 Sum_probs=39.2
Q ss_pred CCCcEEEecCcc-hHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCC-----C--CCCceEEEe
Q 046950 174 GLGSLVDVGGGN-GTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFR-----F--IPPADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~-G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~-----~--~p~~D~~~l 238 (239)
...+|+=+|+|. |..+...+++. +.+++++|. |+.++.++...++..+.+|..+ . ...+|+++.
T Consensus 18 ~~~~v~IiG~G~iG~~la~~L~~~-g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~ 90 (155)
T 2g1u_A 18 KSKYIVIFGCGRLGSLIANLASSS-GHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFA 90 (155)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHT-TCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEE
T ss_pred CCCcEEEECCCHHHHHHHHHHHhC-CCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEE
Confidence 456899998765 44444444443 458999998 5556655523346677777643 1 223787764
No 335
>3pqk_A Biofilm growth-associated repressor; helix-turn-helix motif, winged-helix fold, transcriptional R DNA binding, transcription; 2.09A {Xylella fastidiosa} PDB: 3pqj_A
Probab=51.84 E-value=16 Score=24.36 Aligned_cols=33 Identities=15% Similarity=0.278 Sum_probs=22.5
Q ss_pred HHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeec
Q 046950 36 IELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTK 70 (239)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~ 70 (239)
.++.|+..|.. ++.++.| .|+.|...|++....
T Consensus 24 ~r~~Il~~L~~--~~~~~~ela~~l~is~~tvs~~L~~L~~~Glv~~~~ 70 (102)
T 3pqk_A 24 VRLMLVCTLVE--GEFSVGELEQQIGIGQPTLSQQLGVLRESGIVETRR 70 (102)
T ss_dssp HHHHHHHHHHT--CCBCHHHHHHHHTCCTTHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHHHHh--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEE
Confidence 34445555544 4566655 788999999998875
No 336
>3jth_A Transcription activator HLYU; transcription factor, RTXA, DNA-binding, transcription regulation; 2.00A {Vibrio vulnificus}
Probab=49.91 E-value=10 Score=25.04 Aligned_cols=38 Identities=18% Similarity=0.328 Sum_probs=26.8
Q ss_pred HHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeec
Q 046950 31 SLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTK 70 (239)
Q Consensus 31 ~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~ 70 (239)
+|.--.++.|+..|.. ++.++.| .|+.|...|++.+..
T Consensus 19 ~l~~~~r~~Il~~L~~--~~~~~~ela~~l~is~~tvs~~L~~L~~~Glv~~~~ 70 (98)
T 3jth_A 19 AMANERRLQILCMLHN--QELSVGELCAKLQLSQSALSQHLAWLRRDGLVTTRK 70 (98)
T ss_dssp HHCSHHHHHHHHHTTT--SCEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC
T ss_pred HcCCHHHHHHHHHHhc--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEE
Confidence 3334455666777765 5666666 788999999998875
No 337
>2xig_A Ferric uptake regulation protein; hpfur, transcription, homeostasis; HET: CIT; 1.85A {Helicobacter pylori}
Probab=49.36 E-value=18 Score=26.41 Aligned_cols=47 Identities=9% Similarity=0.225 Sum_probs=30.9
Q ss_pred HHHHhChhhHhhhCCCCCCHHH-------------------HHHHHHhCCceeeeccCCCcccccc
Q 046950 34 CAIELGIADIIHSHGRAITLSE-------------------LMRLLVHSGCFKKTKVNGEEEAYGL 80 (239)
Q Consensus 34 ~a~~lglfd~L~~~~~~~t~~e-------------------lLr~L~~~g~l~~~~~~~~~~~y~~ 80 (239)
+..+.-|++.|...+++.|++| .|+.|...|++.+....++..+|..
T Consensus 26 T~qR~~IL~~l~~~~~~~sa~ei~~~l~~~~~~is~aTVYR~L~~L~e~Glv~~~~~~~~~~~Y~~ 91 (150)
T 2xig_A 26 SKQREEVVSVLYRSGTHLSPEEITHSIRQKDKNTSISSVYRILNFLEKENFISVLETSKSGRRYEI 91 (150)
T ss_dssp HHHHHHHHHHHHHCSSCBCHHHHHHHHHHHSTTCCHHHHHHHHHHHHHTTSEEEEEETTTEEEEEE
T ss_pred CHHHHHHHHHHHhCCCCCCHHHHHHHHHHhCCCCCHhhHHHHHHHHHHCCcEEEEEeCCCceEEEe
Confidence 4555567777765445777776 7889999999998753112234654
No 338
>3f6o_A Probable transcriptional regulator, ARSR family protein; transcriptional regulator,RHA00566,MCSG, structural genomics, PSI-2; 1.90A {Rhodococcus SP}
Probab=46.54 E-value=13 Score=25.78 Aligned_cols=51 Identities=18% Similarity=0.250 Sum_probs=30.8
Q ss_pred HHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccCccc
Q 046950 31 SLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLTAAS 84 (239)
Q Consensus 31 ~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t~~s 84 (239)
+|.--.++.|+..|.. +|.++.+ .|+.|...|++..... +..-.|.+++.+
T Consensus 14 al~~~~R~~Il~~L~~--~~~~~~eLa~~l~is~~tvs~hL~~L~~~GlV~~~~~-gr~~~y~l~~~~ 78 (118)
T 3f6o_A 14 ALADPTRRAVLGRLSR--GPATVSELAKPFDMALPSFMKHIHFLEDSGWIRTHKQ-GRVRTCAIEKEP 78 (118)
T ss_dssp HHTSHHHHHHHHHHHT--CCEEHHHHHTTCCSCHHHHHHHHHHHHHTTSEEEEEE-TTEEEEEECSHH
T ss_pred HhCCHHHHHHHHHHHh--CCCCHHHHHHHhCcCHHHHHHHHHHHHHCCCeEEEec-CCEEEEEECHHH
Confidence 3334455556666654 5666655 7899999999987752 112246666533
No 339
>3f6v_A Possible transcriptional regulator, ARSR family protein; probable transcriptional repressor ARSR family, structural genomics, PSI-2; 1.48A {Rhodococcus SP}
Probab=45.34 E-value=14 Score=27.08 Aligned_cols=54 Identities=17% Similarity=0.201 Sum_probs=37.3
Q ss_pred HHHHHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccCccc
Q 046950 28 SSMSLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLTAAS 84 (239)
Q Consensus 28 ~~~~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t~~s 84 (239)
...+|.--.++.|+..|.. ++.++.+ .|+.|...|+|+.... +..-.|.+|+.+
T Consensus 51 ~l~aL~~p~R~~IL~~L~~--~~~t~~eLa~~lgls~stvs~hL~~L~~aGlV~~~~~-Gr~~~y~lt~~~ 118 (151)
T 3f6v_A 51 QLEVAAEPTRRRLVQLLTS--GEQTVNNLAAHFPASRSAISQHLRVLTEAGLVTPRKD-GRFRYYRLDPQG 118 (151)
T ss_dssp HHHHHTSHHHHHHHHHGGG--CCEEHHHHHTTSSSCHHHHHHHHHHHHHTTSEEEEEE-TTEEEEEECHHH
T ss_pred HHHHhCCHHHHHHHHHHHh--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEec-CCEEEEEEChHH
Confidence 3556666777888888875 6777777 7899999999997751 111246666644
No 340
>2wte_A CSA3; antiviral protein, viral resistance, winged helix-turn-helix prnai nucleotide-binding domain; HET: MSE; 1.80A {Sulfolobus solfataricus}
Probab=44.90 E-value=13 Score=29.76 Aligned_cols=48 Identities=13% Similarity=0.221 Sum_probs=34.4
Q ss_pred HhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccCccccccc
Q 046950 37 ELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLTAASTLLI 88 (239)
Q Consensus 37 ~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t~~s~~l~ 88 (239)
++.++..|... ++.|+.| .++-|...|++++... ...|.+|+.++.+.
T Consensus 154 ~~~IL~~L~~~-~~~s~~eLA~~lglsksTv~r~L~~Le~~GlV~r~~r---~~~~~LT~~G~~l~ 215 (244)
T 2wte_A 154 EMKLLNVLYET-KGTGITELAKMLDKSEKTLINKIAELKKFGILTQKGK---DRKVELNELGLNVI 215 (244)
T ss_dssp HHHHHHHHHHH-TCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEETT---TTEEEECHHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEeCC---ccEEEECHHHHHHH
Confidence 44455565543 4667666 7888999999998742 56799999887654
No 341
>1mzb_A Ferric uptake regulation protein; ferric uptake regulator, iron, DTXR, gene regulation; 1.80A {Pseudomonas aeruginosa} SCOP: a.4.5.42
Probab=44.65 E-value=17 Score=25.95 Aligned_cols=25 Identities=12% Similarity=0.359 Sum_probs=17.0
Q ss_pred HHHHHHhCCceeeeccCCCcccccc
Q 046950 56 LMRLLVHSGCFKKTKVNGEEEAYGL 80 (239)
Q Consensus 56 lLr~L~~~g~l~~~~~~~~~~~y~~ 80 (239)
.|+.|...|++.+....++..+|..
T Consensus 59 ~L~~L~e~Glv~~~~~~~~~~~Y~~ 83 (136)
T 1mzb_A 59 VLTQFEAAGLVVRHNFDGGHAVFEL 83 (136)
T ss_dssp HHHHHHHHTSEEEECSSSSSCEEEE
T ss_pred HHHHHHHCCcEEEEEeCCCceEEEe
Confidence 7889999999998753112234654
No 342
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=44.54 E-value=23 Score=30.56 Aligned_cols=30 Identities=17% Similarity=0.143 Sum_probs=24.6
Q ss_pred cEEEecCcchHHH--HHHHHHCCCCeEEEeeh
Q 046950 177 SLVDVGGGNGTFS--RIISEAFPGIKCTVLDL 206 (239)
Q Consensus 177 ~vvDVGGG~G~~~--~~l~~~~P~l~~~~~Dl 206 (239)
+||=||||.+-+. ..+++..++.+++++|.
T Consensus 2 KVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~ 33 (437)
T 4eqs_A 2 KIVVVGAVAGGATCASQIRRLDKESDIIIFEK 33 (437)
T ss_dssp CEEEECCSTTHHHHHHHHHHHCSSSCEEEEES
T ss_pred eEEEECCCHHHHHHHHHHHhCCCCCcEEEEeC
Confidence 6889999998764 45777889999999985
No 343
>1vpt_A VP39; RNA CAP, poly(A) polymerase, methyltransferase; HET: SAM; 1.80A {Vaccinia virus} SCOP: c.66.1.25 PDB: 1vp3_A*
Probab=44.51 E-value=17 Score=30.37 Aligned_cols=53 Identities=21% Similarity=0.304 Sum_probs=37.9
Q ss_pred CCcEEEecCcchHHHHHHHHHCCC----CeEEEeehHHHHhcCCCCCCeEEEEccCCC
Q 046950 175 LGSLVDVGGGNGTFSRIISEAFPG----IKCTVLDLPHAVANLPEADNLKYIAGDMFR 228 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~P~----l~~~~~Dlp~vi~~a~~~~ri~~~~gD~f~ 228 (239)
...||=+|.+.|..+.-|...||+ ++.+++|-..-+........|+++.. ||+
T Consensus 76 g~~VVYaGsAPG~HI~fL~~lF~~l~~~lkwvLiDp~~f~~~Le~~~ni~li~~-ffd 132 (348)
T 1vpt_A 76 GATVVYIGSAPGTHIRYLRDHFYNLGVIIKWMLIDGRHHDPILNGLRDVTLVTR-FVD 132 (348)
T ss_dssp TCEEEEESCSSCHHHHHHHHHHHHTTCCCEEEEEESSCCCGGGTTCTTEEEEEC-CCC
T ss_pred CCeEEEeCcCCcchHHHHHHHhhhcCCceEEEEECCCchhhhhcCCCcEEeehh-hcC
Confidence 359999999999999999988886 79999996432222233445665543 554
No 344
>3cuo_A Uncharacterized HTH-type transcriptional regulato; DNA-binding transcriptional regulator, structural genomics, MCSG; 2.00A {Escherichia coli K12}
Probab=44.41 E-value=15 Score=23.95 Aligned_cols=38 Identities=11% Similarity=0.150 Sum_probs=27.0
Q ss_pred HHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeec
Q 046950 32 LKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTK 70 (239)
Q Consensus 32 L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~ 70 (239)
+..-.++.|+..|... ++.+..| .|+.|...|++.+..
T Consensus 21 l~~~~~~~il~~l~~~-~~~s~~ela~~l~is~~tvs~~l~~L~~~glv~~~~ 72 (99)
T 3cuo_A 21 MSHPKRLLILCMLSGS-PGTSAGELTRITGLSASATSQHLARMRDEGLIDSQR 72 (99)
T ss_dssp HCSHHHHHHHHHHTTC-CSEEHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred hCChHHHHHHHHHHhC-CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEe
Confidence 3334566677777653 4777766 788899999999875
No 345
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=44.15 E-value=28 Score=25.65 Aligned_cols=63 Identities=17% Similarity=0.117 Sum_probs=35.8
Q ss_pred CCcEEEecCcc-hHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCC-----C---CCCceEEEe
Q 046950 175 LGSLVDVGGGN-GTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFR-----F---IPPADAFLF 238 (239)
Q Consensus 175 ~~~vvDVGGG~-G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~-----~---~p~~D~~~l 238 (239)
..+|+=+|+|. |..+...+++..+.+++++|. |+.++.+. ..++..+.+|..+ . ...+|+++.
T Consensus 39 ~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~-~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~ 111 (183)
T 3c85_A 39 HAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQHR-SEGRNVISGDATDPDFWERILDTGHVKLVLL 111 (183)
T ss_dssp TCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH-HTTCCEEECCTTCHHHHHTBCSCCCCCEEEE
T ss_pred CCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH-HCCCCEEEcCCCCHHHHHhccCCCCCCEEEE
Confidence 45788888753 434333333321457889988 44444443 2346677787754 2 223787764
No 346
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=44.12 E-value=31 Score=26.35 Aligned_cols=60 Identities=12% Similarity=0.212 Sum_probs=37.3
Q ss_pred cEEEecCcchHHHHHHHHHC--CCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCCC-------CCCceEEEe
Q 046950 177 SLVDVGGGNGTFSRIISEAF--PGIKCTVLDL-PHAVANLPEADNLKYIAGDMFRF-------IPPADAFLF 238 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~--P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~~-------~p~~D~~~l 238 (239)
+|+=+|+ |.++..+++.. -+.+++++|. |+.++......++.++.||..++ +..+|+++.
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 71 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVI 71 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEE
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEE
Confidence 4666775 55555555433 3567899998 55555433233578899998762 334787764
No 347
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=44.09 E-value=23 Score=29.63 Aligned_cols=32 Identities=13% Similarity=0.228 Sum_probs=25.0
Q ss_pred cEEEecCcchHHHH--HHHHHCCCCeEEEeehHH
Q 046950 177 SLVDVGGGNGTFSR--IISEAFPGIKCTVLDLPH 208 (239)
Q Consensus 177 ~vvDVGGG~G~~~~--~l~~~~P~l~~~~~Dlp~ 208 (239)
.|+=||||.+-.+. .|+++.|.++++++|..+
T Consensus 2 dV~IVGaG~aGl~~A~~L~~~~~G~~V~v~E~~~ 35 (381)
T 3c4a_A 2 KILVIGAGPAGLVFASQLKQARPLWAIDIVEKND 35 (381)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSC
T ss_pred eEEEECCCHHHHHHHHHHHhcCCCCCEEEEECCC
Confidence 58889999877644 556667899999999843
No 348
>1r1u_A CZRA, repressor protein; zinc, DNA binding, transcriptional regulation, winged HTH protein, transcription repressor; 2.00A {Staphylococcus aureus} SCOP: a.4.5.5 PDB: 1r1v_A 2kjb_A 2kjc_A
Probab=43.00 E-value=17 Score=24.47 Aligned_cols=34 Identities=12% Similarity=0.222 Sum_probs=23.3
Q ss_pred HHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeec
Q 046950 35 AIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTK 70 (239)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~ 70 (239)
-.++.|+..|.. ++.++.+ .|+.|...|++....
T Consensus 26 ~~r~~IL~~L~~--~~~~~~ela~~l~is~stvs~~L~~L~~~Glv~~~~ 73 (106)
T 1r1u_A 26 YNRIRIMELLSV--SEASVGHISHQLNLSQSNVSHQLKLLKSVHLVKAKR 73 (106)
T ss_dssp HHHHHHHHHHHH--CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHHh--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEE
Confidence 344555555653 4666665 788899999999764
No 349
>3df8_A Possible HXLR family transcriptional factor; APC89000, structural genomics, midwest center for structural genomics, MCSG; 1.65A {Thermoplasma volcanium} SCOP: a.4.5.0
Probab=42.54 E-value=9 Score=26.37 Aligned_cols=72 Identities=14% Similarity=0.110 Sum_probs=48.3
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHhCh---hhHhhhCCCCCCHHH---HHHHHHhCCceeeeccCCCccccccCccccccc
Q 046950 15 GQAQLYKLMFNHLSSMSLKCAIELGI---ADIIHSHGRAITLSE---LMRLLVHSGCFKKTKVNGEEEAYGLTAASTLLI 88 (239)
Q Consensus 15 ~~~~l~~~~~g~~~~~~L~~a~~lgl---fd~L~~~~~~~t~~e---lLr~L~~~g~l~~~~~~~~~~~y~~t~~s~~l~ 88 (239)
+...+++.+.+.|...+|....+-.. |..|.+.-..+|... .|+.|...|+|++... ..-.|.+|+.++.+.
T Consensus 16 ~~~~~l~~l~~~wrl~IL~~L~~g~~~~~~~eL~~~l~gis~~~ls~~L~~Le~~GlV~r~~~--r~~~y~LT~~G~~l~ 93 (111)
T 3df8_A 16 PSESVLHLLGKKYTMLIISVLGNGSTRQNFNDIRSSIPGISSTILSRRIKDLIDSGLVERRSG--QITTYALTEKGMNVR 93 (111)
T ss_dssp TTSSTHHHHHSTTHHHHHHHHTSSSSCBCHHHHHHTSTTCCHHHHHHHHHHHHHTTSEEEEES--SSEEEEECHHHHHHH
T ss_pred HHHHHHHHHcCccHHHHHHHHhcCCCCCCHHHHHHHccCCCHHHHHHHHHHHHHCCCEEEeec--CcEEEEECccHHHHH
Confidence 55667888888888888877653222 566766311344443 8999999999998741 124688888877554
No 350
>1on2_A Transcriptional regulator MNTR; helix-turn-helix, DNA-binding protein, metalloregulatory protein; 1.61A {Bacillus subtilis} SCOP: a.4.5.24 a.76.1.1 PDB: 2ev0_A 1on1_A 2ev5_A 2ev6_A* 2f5c_A 2f5d_A 2f5e_A 2f5f_A 2hyf_A* 2hyg_D 3r60_A* 3r61_A*
Probab=41.55 E-value=16 Score=25.91 Aligned_cols=29 Identities=14% Similarity=0.053 Sum_probs=23.7
Q ss_pred HHHHHHhCCceeeeccCCCccccccCccccccc
Q 046950 56 LMRLLVHSGCFKKTKVNGEEEAYGLTAASTLLI 88 (239)
Q Consensus 56 lLr~L~~~g~l~~~~~~~~~~~y~~t~~s~~l~ 88 (239)
+++.|...|++.+.. ...|.+|+.+..+.
T Consensus 42 ~l~~Le~~Glv~r~~----~~~~~LT~~g~~~~ 70 (142)
T 1on2_A 42 MVQKLDKDEYLIYEK----YRGLVLTSKGKKIG 70 (142)
T ss_dssp HHHHHHHTTSEEEET----TTEEEECHHHHHHH
T ss_pred HHHHHHHCCCEEEee----CceEEEchhHHHHH
Confidence 889999999999885 46788998876544
No 351
>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A
Probab=40.71 E-value=58 Score=25.01 Aligned_cols=60 Identities=15% Similarity=0.115 Sum_probs=39.6
Q ss_pred CCcEEEecCcchHHHHHHHHHCCCCe-EEEeeh-HHHHhcCCCCCCeEEEEccCCCC-------CCCceEEEe
Q 046950 175 LGSLVDVGGGNGTFSRIISEAFPGIK-CTVLDL-PHAVANLPEADNLKYIAGDMFRF-------IPPADAFLF 238 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~P~l~-~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~~-------~p~~D~~~l 238 (239)
..+++=+|+ |..+..+++..-... ++++|. |+.++.+. .++.++.||..++ +..+|+++.
T Consensus 9 ~~~viI~G~--G~~G~~la~~L~~~g~v~vid~~~~~~~~~~--~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (234)
T 2aef_A 9 SRHVVICGW--SESTLECLRELRGSEVFVLAEDENVRKKVLR--SGANFVHGDPTRVSDLEKANVRGARAVIV 77 (234)
T ss_dssp -CEEEEESC--CHHHHHHHHHSTTSEEEEEESCGGGHHHHHH--TTCEEEESCTTCHHHHHHTTCTTCSEEEE
T ss_pred CCEEEEECC--ChHHHHHHHHHHhCCeEEEEECCHHHHHHHh--cCCeEEEcCCCCHHHHHhcCcchhcEEEE
Confidence 457888887 577777777664322 788887 45555444 4588999998752 334787764
No 352
>3kp7_A Transcriptional regulator TCAR; multiple drug resistance, biofilm, transcription regulation, binding, transcription regulator; 2.30A {Staphylococcus epidermidis RP62A} PDB: 3kp3_A* 3kp4_A* 3kp5_A* 3kp2_A* 3kp6_A
Probab=40.62 E-value=82 Score=22.04 Aligned_cols=51 Identities=14% Similarity=0.193 Sum_probs=31.1
Q ss_pred HHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeee----ccCCCccccccCccccccc
Q 046950 36 IELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKT----KVNGEEEAYGLTAASTLLI 88 (239)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~----~~~~~~~~y~~t~~s~~l~ 88 (239)
.++.++..| .. ++.|..+ +++-|...|++.+. +.+...-.+.+|+.++.+.
T Consensus 39 ~q~~iL~~l-~~-~~~t~~eLa~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~~~D~R~~~~~lT~~G~~~~ 107 (151)
T 3kp7_A 39 EQSHVLNML-SI-EALTVGQITEKQGVNKAAVSRRVKKLLNAELVKLEKPDSNTDQRLKIIKLSNKGKKYI 107 (151)
T ss_dssp HHHHHHHHH-HH-SCBCHHHHHHHHCSCSSHHHHHHHHHHHTTSEEC-----------CCBEECHHHHHHH
T ss_pred HHHHHHHHH-Hc-CCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCCCCCCCCeeEEEECHhHHHHH
Confidence 344477777 43 6788877 88999999999972 2100112356666666444
No 353
>2kko_A Possible transcriptional regulatory protein (possibly ARSR-family); NESG, DNA-binding, transcription regulation, WHTH, homodimer; NMR {Mycobacterium bovis} PDB: 3gw2_A
Probab=40.55 E-value=40 Score=22.69 Aligned_cols=52 Identities=13% Similarity=0.135 Sum_probs=30.4
Q ss_pred ChhhhchHHHHHHHHHHhHHHHHHHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeec
Q 046950 8 GAKELFQGQAQLYKLMFNHLSSMSLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTK 70 (239)
Q Consensus 8 ~~~~~~~~~~~l~~~~~g~~~~~~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~ 70 (239)
-..+.......+++.+.......+ +..|.. ++.++.| .|+.|...|++....
T Consensus 7 ~~~~~~~~~~~~~~al~~~~r~~I---------L~~L~~--~~~s~~eLa~~lgis~stvs~~L~~L~~~GlV~~~~ 72 (108)
T 2kko_A 7 RKAALLDQVARVGKALANGRRLQI---------LDLLAQ--GERAVEAIATATGMNLTTASANLQALKSGGLVEARR 72 (108)
T ss_dssp THHHHHHHHHHHHHHHTTSTTHHH---------HHHHTT--CCEEHHHHHHHHTCCHHHHHHHHHHHHHHTSEEEEE
T ss_pred cChhhHHHHHHHHHHhCCHHHHHH---------HHHHHc--CCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEE
Confidence 333444445555555554444443 344443 4555555 788999999998764
No 354
>2vvp_A Ribose-5-phosphate isomerase B; RPIB, RV2465C, RARE sugar, carbohydrate metabolism, pentose phosphate pathway; HET: R52 5RP; 1.65A {Mycobacterium tuberculosis} SCOP: c.121.1.1 PDB: 2vvo_A* 2vvq_A* 2bes_A* 2bet_A* 1usl_A
Probab=39.79 E-value=13 Score=27.82 Aligned_cols=53 Identities=32% Similarity=0.383 Sum_probs=37.7
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC--CCCeEEEEccC
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE--ADNLKYIAGDM 226 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~--~~ri~~~~gD~ 226 (239)
+....-=+.||+|.-....+.++|.+|+.+.--|.....+++ ..+|-.+++-+
T Consensus 60 g~~d~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnaNVL~lG~rv 114 (162)
T 2vvp_A 60 DPGSLGIVLGGSGNGEQIAANKVPGARCALAWSVQTAALAREHNNAQLIGIGGRM 114 (162)
T ss_dssp STTCEEEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEEGGG
T ss_pred CCCceEEEEeCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 333456678999999999999999999877777766666554 33455555544
No 355
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=39.76 E-value=25 Score=29.43 Aligned_cols=63 Identities=13% Similarity=0.144 Sum_probs=41.2
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCe-EEEeeh-HHHHhcCCC-CCCeEEEEccCCCC----CC--CceEEEe
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIK-CTVLDL-PHAVANLPE-ADNLKYIAGDMFRF----IP--PADAFLF 238 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~-~~~~Dl-p~vi~~a~~-~~ri~~~~gD~f~~----~p--~~D~~~l 238 (239)
.+++|+-||.|.+...+.++--+.+ ++..|. +..++..+. -....++.+|+.+- ++ .+|++++
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~~~~~~~Di~~~~~~~~~~~~~D~l~~ 74 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPHTQLLAKTIEGITLEEFDRLSFDMILM 74 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTTSCEECSCGGGCCHHHHHHHCCSEEEE
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccccccccCCHHHccHhHcCcCCcCEEEE
Confidence 4799999999999999998853333 577787 444443321 22344677887652 23 3687765
No 356
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=39.27 E-value=29 Score=30.44 Aligned_cols=33 Identities=21% Similarity=0.421 Sum_probs=27.8
Q ss_pred CCcEEEecCcchHHHHH--HHHHCCCCeEEEeehH
Q 046950 175 LGSLVDVGGGNGTFSRI--ISEAFPGIKCTVLDLP 207 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~--l~~~~P~l~~~~~Dlp 207 (239)
..+||=||||.+-+..+ |.+..++.+++++|-.
T Consensus 11 ~~~vvIIGgG~AGl~aA~~L~~~~~g~~V~lie~~ 45 (493)
T 1m6i_A 11 HVPFLLIGGGTAAFAAARSIRARDPGARVLIVSED 45 (493)
T ss_dssp EEEEEEESCSHHHHHHHHHHHHHSTTCEEEEEESS
T ss_pred cCCEEEECChHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 45799999999888776 7888899999999973
No 357
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=39.14 E-value=31 Score=29.85 Aligned_cols=33 Identities=15% Similarity=0.066 Sum_probs=26.4
Q ss_pred CcEEEecCcchHHH--HHHHHHCCCCeEEEeehHH
Q 046950 176 GSLVDVGGGNGTFS--RIISEAFPGIKCTVLDLPH 208 (239)
Q Consensus 176 ~~vvDVGGG~G~~~--~~l~~~~P~l~~~~~Dlp~ 208 (239)
.+||=||||.+-+. ..|++..|+.+++++|..+
T Consensus 4 ~~VvIIGaG~aGl~aA~~L~~~~~g~~Vtvie~~~ 38 (472)
T 3iwa_A 4 KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQAS 38 (472)
T ss_dssp CEEEEECCSSHHHHHHHHHHHHCTTSEEEEECCC-
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEECCC
Confidence 47999999988774 4677788999999999744
No 358
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=38.82 E-value=30 Score=29.82 Aligned_cols=32 Identities=13% Similarity=0.233 Sum_probs=26.2
Q ss_pred CcEEEecCcchHH--HHHHHHHCCCCeEEEeehH
Q 046950 176 GSLVDVGGGNGTF--SRIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 176 ~~vvDVGGG~G~~--~~~l~~~~P~l~~~~~Dlp 207 (239)
.+||=||||.+-+ +..|++..|+.+++++|..
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~~ 36 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQAEISLIDKQ 36 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSSEEEEECSS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCCcEEEEECC
Confidence 4689999999877 4467778899999999874
No 359
>2nyx_A Probable transcriptional regulatory protein, RV14; alpha/beta, structural genomics, PSI-2; 2.30A {Mycobacterium tuberculosis}
Probab=38.50 E-value=76 Score=22.88 Aligned_cols=53 Identities=17% Similarity=0.170 Sum_probs=34.2
Q ss_pred HHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCC--CccccccCccccccc
Q 046950 35 AIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNG--EEEAYGLTAASTLLI 88 (239)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~--~~~~y~~t~~s~~l~ 88 (239)
..++.++..|... ++++..+ +++-|...|+|++..... ..-.+.+|+.++.+.
T Consensus 45 ~~~~~iL~~L~~~-~~~t~~eLa~~l~is~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~~~LT~~G~~~~ 113 (168)
T 2nyx_A 45 IPQFRTLVILSNH-GPINLATLATLLGVQPSATGRMVDRLVGAELIDRLPHPTSRRELLAALTKRGRDVV 113 (168)
T ss_dssp HHHHHHHHHHHHH-CSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCSSCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEeccCCCCCCeeEEEECHHHHHHH
Confidence 3455677777664 4677766 889999999999864210 111266777776444
No 360
>3s5p_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.30A {Giardia lamblia}
Probab=37.54 E-value=15 Score=27.51 Aligned_cols=53 Identities=17% Similarity=0.215 Sum_probs=37.0
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC--CCCeEEEEccC
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE--ADNLKYIAGDM 226 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~--~~ri~~~~gD~ 226 (239)
+....-=+.||+|.-....+.++|.+|+.+.--+.....+++ ..+|-.+++-+
T Consensus 77 g~~d~GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~hNnANVL~lG~Rv 131 (166)
T 3s5p_A 77 GRADCCILVCGTGIGISIAANKMKGIRCALCSTEYDAEMARKHNNANALALGGRT 131 (166)
T ss_dssp TSCSEEEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHTTCCCEEEEETTT
T ss_pred CCCcEEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 333445577999999999999999999877777776666654 33444444443
No 361
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=37.28 E-value=44 Score=28.75 Aligned_cols=61 Identities=25% Similarity=0.366 Sum_probs=39.8
Q ss_pred CcEEEecCcc-hHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCCC-------CCCceEEEe
Q 046950 176 GSLVDVGGGN-GTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFRF-------IPPADAFLF 238 (239)
Q Consensus 176 ~~vvDVGGG~-G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~~-------~p~~D~~~l 238 (239)
.+|+=||+|. |..+...+++ -+.+++++|. |+.++.++ ..++.++.||..++ +..+|+++.
T Consensus 5 ~~viIiG~Gr~G~~va~~L~~-~g~~vvvId~d~~~v~~~~-~~g~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 5 MRVIIAGFGRFGQITGRLLLS-SGVKMVVLDHDPDHIETLR-KFGMKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CSEEEECCSHHHHHHHHHHHH-TTCCEEEEECCHHHHHHHH-HTTCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHH-CCCCEEEEECCHHHHHHHH-hCCCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 4688888765 4444444444 3578999998 66666655 34577888998763 223777764
No 362
>3he8_A Ribose-5-phosphate isomerase; CTRPI B, isomerization; 1.90A {Clostridium thermocellum} PDB: 3hee_A*
Probab=36.85 E-value=15 Score=27.04 Aligned_cols=50 Identities=20% Similarity=0.135 Sum_probs=36.0
Q ss_pred cEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC--CCCeEEEEccC
Q 046950 177 SLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE--ADNLKYIAGDM 226 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~--~~ri~~~~gD~ 226 (239)
..-=+.||+|.-....+.++|.+|+.+.--|.....+++ ..+|-.+++-+
T Consensus 59 d~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnaNVl~lG~rv 110 (149)
T 3he8_A 59 DRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERV 110 (149)
T ss_dssp SEEEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTT
T ss_pred CEEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 345577899999999999999999877777776666654 33454455444
No 363
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=36.77 E-value=50 Score=26.08 Aligned_cols=59 Identities=15% Similarity=0.059 Sum_probs=33.8
Q ss_pred EEEecCcchHHHHHHH---HHCCCCeEEEeehHH-HHhcCCCCCCeEEEEccCCCC------CCCceEEEe
Q 046950 178 LVDVGGGNGTFSRIIS---EAFPGIKCTVLDLPH-AVANLPEADNLKYIAGDMFRF------IPPADAFLF 238 (239)
Q Consensus 178 vvDVGGG~G~~~~~l~---~~~P~l~~~~~Dlp~-vi~~a~~~~ri~~~~gD~f~~------~p~~D~~~l 238 (239)
|+=.| |+|..+..++ .+.+..+++++++.. ..... ...+++++.+|+.++ +...|+++.
T Consensus 3 ilVtG-atG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~ 71 (289)
T 3e48_A 3 IMLTG-ATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-WRGKVSVRQLDYFNQESMVEAFKGMDTVVF 71 (289)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-GBTTBEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred EEEEc-CCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-hhCCCEEEEcCCCCHHHHHHHHhCCCEEEE
Confidence 45444 4455544444 444577788887743 21111 246799999999773 223677653
No 364
>2y75_A HTH-type transcriptional regulator CYMR; DNA binding protein; 2.00A {Bacillus subtilis}
Probab=36.60 E-value=54 Score=22.72 Aligned_cols=25 Identities=24% Similarity=0.271 Sum_probs=17.3
Q ss_pred HHHHHHhCCceeeeccCCCccccccCc
Q 046950 56 LMRLLVHSGCFKKTKVNGEEEAYGLTA 82 (239)
Q Consensus 56 lLr~L~~~g~l~~~~~~~~~~~y~~t~ 82 (239)
+++.|...|++..... ..|.|.+++
T Consensus 46 il~~L~~~Glv~~~~g--~~ggy~L~~ 70 (129)
T 2y75_A 46 LVSPLRNAGLVKSIRG--AYGGYVLGS 70 (129)
T ss_dssp HHHHHHHTTSEEEC------CCEEESS
T ss_pred HHHHHHHCCceEecCC--CCCceEeCC
Confidence 8999999999987631 136677665
No 365
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=36.58 E-value=81 Score=22.28 Aligned_cols=61 Identities=23% Similarity=0.284 Sum_probs=36.2
Q ss_pred CcEEEecCcchHHHHHHHHHC--CCCeEEEeeh-H-HHHhcCCC--CCCeEEEEccCCCC-------CCCceEEEe
Q 046950 176 GSLVDVGGGNGTFSRIISEAF--PGIKCTVLDL-P-HAVANLPE--ADNLKYIAGDMFRF-------IPPADAFLF 238 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~--P~l~~~~~Dl-p-~vi~~a~~--~~ri~~~~gD~f~~-------~p~~D~~~l 238 (239)
.+++=+|+ |..+..+++.. -+.+++++|. | +.++.... ..++.++.||..++ +..+|+++.
T Consensus 4 ~~vlI~G~--G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (153)
T 1id1_A 4 DHFIVCGH--SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILA 77 (153)
T ss_dssp SCEEEECC--SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEE
T ss_pred CcEEEECC--CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEE
Confidence 46777775 55555554433 2467888888 3 32222211 34588999998652 334777764
No 366
>1s3j_A YUSO protein; structural genomics, MARR transcriptional regulator family, PSI, protein structure initiative; HET: MSE; 2.25A {Bacillus subtilis} SCOP: a.4.5.28
Probab=36.04 E-value=71 Score=22.39 Aligned_cols=50 Identities=16% Similarity=0.204 Sum_probs=29.8
Q ss_pred HhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccC-C-CccccccCcccccc
Q 046950 37 ELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVN-G-EEEAYGLTAASTLL 87 (239)
Q Consensus 37 ~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~-~-~~~~y~~t~~s~~l 87 (239)
++.++..|... ++.+..+ +++-|...|++.+.... + ..-.+.+|+.++.+
T Consensus 39 ~~~iL~~l~~~-~~~t~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~ 104 (155)
T 1s3j_A 39 QLFVLASLKKH-GSLKVSEIAERMEVKPSAVTLMADRLEQKNLIARTHNTKDRRVIDLSLTDEGDIK 104 (155)
T ss_dssp HHHHHHHHHHH-SEEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHHH
T ss_pred HHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeecCCCCCCceEEEEECHHHHHH
Confidence 34466666554 4566655 88999999999987420 0 01125566655543
No 367
>1o1x_A Ribose-5-phosphate isomerase RPIB; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.90A {Thermotoga maritima} SCOP: c.121.1.1
Probab=36.04 E-value=13 Score=27.63 Aligned_cols=54 Identities=15% Similarity=0.206 Sum_probs=38.7
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC--CCCeEEEEccC
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE--ADNLKYIAGDM 226 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~--~~ri~~~~gD~ 226 (239)
++....-=+.||+|.-....+.++|.+|+.+.--|.....+++ ..+|-.+++-+
T Consensus 67 ~g~~d~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnANVL~lG~rv 122 (155)
T 1o1x_A 67 SNEADFGILLCGTGLGMSIAANRYRGIRAALCLFPDMARLARSHNNANILVLPGRL 122 (155)
T ss_dssp TTSCSEEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTT
T ss_pred cCCCceEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHcCCCcEEEECCcc
Confidence 3334456678999999999999999999887777777666654 33455555544
No 368
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=36.03 E-value=62 Score=21.25 Aligned_cols=62 Identities=21% Similarity=0.108 Sum_probs=36.1
Q ss_pred CcEEEecCc-chHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCCC------CCCceEEEe
Q 046950 176 GSLVDVGGG-NGTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFRF------IPPADAFLF 238 (239)
Q Consensus 176 ~~vvDVGGG-~G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~~------~p~~D~~~l 238 (239)
.+|+=+|+| .|......+......++++.|+ ++..+... ..++.+..+|+.++ +..+|+++.
T Consensus 6 ~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 6 WNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp EEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 467778773 2333344444555467889998 33333332 44677888888652 223677653
No 369
>2hzt_A Putative HTH-type transcriptional regulator YTCD; DNA-binding protein, HTH-type transcription regulators, structural genomics, PSI-2; HET: CSU MSE; 2.00A {Bacillus subtilis} SCOP: a.4.5.69
Probab=35.95 E-value=29 Score=23.35 Aligned_cols=73 Identities=15% Similarity=0.119 Sum_probs=42.4
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHhC--hhhHhhhCCCCCCH---HHHHHHHHhCCceeeeccCC--CccccccCcccccc
Q 046950 15 GQAQLYKLMFNHLSSMSLKCAIELG--IADIIHSHGRAITL---SELMRLLVHSGCFKKTKVNG--EEEAYGLTAASTLL 87 (239)
Q Consensus 15 ~~~~l~~~~~g~~~~~~L~~a~~lg--lfd~L~~~~~~~t~---~elLr~L~~~g~l~~~~~~~--~~~~y~~t~~s~~l 87 (239)
+...+++++.+.|...+|....+ | =+..|.+.-..++. ...|+.|...|++++..... ..-.|.+|+.++.+
T Consensus 3 ~~~~~l~~l~~~~~~~IL~~L~~-~~~~~~eLa~~l~~is~~tls~~L~~Le~~GlI~r~~~~~d~r~~~y~LT~~G~~l 81 (107)
T 2hzt_A 3 LVEATLEVIGGKWKXVILXHLTH-GKKRTSELKRLMPNITQKMLTQQLRELEADGVINRIVYNQVPPKVEYELSEYGRSL 81 (107)
T ss_dssp HHHHHHHHHCSTTHHHHHHHHTT-CCBCHHHHHHHCTTSCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECTTGGGG
T ss_pred HHHHHHHHHcCccHHHHHHHHHh-CCCCHHHHHHHhcCCCHHHHHHHHHHHHHCCCEEEeecCCCCCeEEEEECccHHHH
Confidence 44567777777777766665432 3 23444432113333 33899999999999875210 01247788776544
Q ss_pred c
Q 046950 88 I 88 (239)
Q Consensus 88 ~ 88 (239)
.
T Consensus 82 ~ 82 (107)
T 2hzt_A 82 E 82 (107)
T ss_dssp H
T ss_pred H
Confidence 3
No 370
>1xmk_A Double-stranded RNA-specific adenosine deaminase; winged helix-turn-helix, RNA editing, interferon, ADAR1, hydrolase; 0.97A {Homo sapiens} SCOP: a.4.5.19
Probab=35.89 E-value=29 Score=22.46 Aligned_cols=28 Identities=11% Similarity=0.114 Sum_probs=20.5
Q ss_pred HHHHHHhCCceeeeccCCCccccccCcccc
Q 046950 56 LMRLLVHSGCFKKTKVNGEEEAYGLTAAST 85 (239)
Q Consensus 56 lLr~L~~~g~l~~~~~~~~~~~y~~t~~s~ 85 (239)
.|..|...|+|.+... +...|.+|+.++
T Consensus 46 hL~~Le~eGlV~~~~~--gRP~w~LT~~g~ 73 (79)
T 1xmk_A 46 VLIDMERQGDVYRQGT--TPPIWHLTDKKR 73 (79)
T ss_dssp HHHHHHHTTSEEEECS--SSCEEEECHHHH
T ss_pred HHHHHHHCCCEEecCC--CCCCeEeCHhHH
Confidence 6888899999986642 123788888765
No 371
>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*
Probab=35.84 E-value=44 Score=27.46 Aligned_cols=65 Identities=14% Similarity=0.152 Sum_probs=36.0
Q ss_pred CCcEEEecCcc--hHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCC-CCCCceEEEeC
Q 046950 175 LGSLVDVGGGN--GTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFR-FIPPADAFLFK 239 (239)
Q Consensus 175 ~~~vvDVGGG~--G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~-~~p~~D~~~l~ 239 (239)
..+|.=||+|. +.++..|++.....+++++|. ++.++.+.+..-+.....|.-+ -...+|+|++.
T Consensus 33 ~~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~~~G~~~~~~~~~~~~~~~~aDvVila 101 (314)
T 3ggo_A 33 MQNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKAVDLGIIDEGTTSIAKVEDFSPDFVMLS 101 (314)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHTTSCSEEESCTTGGGGGCCSEEEEC
T ss_pred CCEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHCCCcchhcCCHHHHhhccCCEEEEe
Confidence 36789999774 344555665544448999998 4455544322212122233322 23448888763
No 372
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=35.75 E-value=33 Score=29.01 Aligned_cols=32 Identities=16% Similarity=0.187 Sum_probs=25.2
Q ss_pred CcEEEecCcchHH--HHHHHHHCCCCeEEEeehH
Q 046950 176 GSLVDVGGGNGTF--SRIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 176 ~~vvDVGGG~G~~--~~~l~~~~P~l~~~~~Dlp 207 (239)
..||-||||..-. +..|++++|.++++++|..
T Consensus 37 ~dVvIIGaGi~Gls~A~~La~~~pG~~V~vlE~~ 70 (405)
T 3c4n_A 37 FDIVVIGAGRMGAACAFYLRQLAPGRSLLLVEEG 70 (405)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHCTTSCEEEECSS
T ss_pred CCEEEECCcHHHHHHHHHHHhcCCCCeEEEEeCC
Confidence 3589999997655 4467778889999999973
No 373
>2f2e_A PA1607; transcription factor, helix-TRUN-helix, APC5613, structural genomics, PSI, protein structure initiative; HET: GLC; 1.85A {Pseudomonas aeruginosa} SCOP: a.4.5.69
Probab=35.74 E-value=28 Score=25.05 Aligned_cols=72 Identities=19% Similarity=0.201 Sum_probs=41.0
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhC--hhhHhhhCC--CCCCHHHHHHHHHhCCceeeeccC-CCccccccCccccccc
Q 046950 16 QAQLYKLMFNHLSSMSLKCAIELG--IADIIHSHG--RAITLSELMRLLVHSGCFKKTKVN-GEEEAYGLTAASTLLI 88 (239)
Q Consensus 16 ~~~l~~~~~g~~~~~~L~~a~~lg--lfd~L~~~~--~~~t~~elLr~L~~~g~l~~~~~~-~~~~~y~~t~~s~~l~ 88 (239)
..+.++++.+.|...+|.... .| =|..|.+.- .+-++...|+.|...|++++.... +..-.|.+|+.++.+.
T Consensus 14 ~~~~l~~l~~~w~l~IL~~L~-~g~~~~~eLa~~lgis~~tls~~L~~Le~~GlI~r~~~~~d~~~~y~LT~~G~~l~ 90 (146)
T 2f2e_A 14 VARPLDVIGDGWSMLIVRDAF-EGLTRFGEFQKSLGLAKNILAARLRNLVEHGVMVAVPAESGSHQEYRLTDKGRALF 90 (146)
T ss_dssp TTTTHHHHCSSSHHHHHHHHH-TTCCSHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEEECSSSSCEEEEECHHHHTTH
T ss_pred HHHHHHHhCCchHHHHHHHHH-hCCCCHHHHHHHhCCCHHHHHHHHHHHHHCCCEEEEecCCCCeEEEEECchHHHHH
Confidence 345566666667666665543 22 234443320 122333389999999999987521 0012588888776544
No 374
>3b1f_A Putative prephenate dehydrogenase; enzyme, 4-hydroxyphenylpyruvate, oxidative decarboxylation pathway, tyrosine biosynthesis, oxidoreduct; HET: NAD; 2.10A {Streptococcus mutans} PDB: 3dzb_A
Probab=35.74 E-value=54 Score=26.12 Aligned_cols=64 Identities=16% Similarity=0.114 Sum_probs=35.3
Q ss_pred CcEEEecCcc--hHHHHHHHHHCCCCeEEEeeh-HHHHhcCCCCCCeEEEEccCCCCCCCceEEEeC
Q 046950 176 GSLVDVGGGN--GTFSRIISEAFPGIKCTVLDL-PHAVANLPEADNLKYIAGDMFRFIPPADAFLFK 239 (239)
Q Consensus 176 ~~vvDVGGG~--G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~~~~ri~~~~gD~f~~~p~~D~~~l~ 239 (239)
.+|.=||+|. +.++..|.+..+..++++.|. ++.++.+.+...+.....|.-+.+..+|++++.
T Consensus 7 ~~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~~~~g~~~~~~~~~~~~~~~aDvVila 73 (290)
T 3b1f_A 7 KTIYIAGLGLIGASLALGIKRDHPHYKIVGYNRSDRSRDIALERGIVDEATADFKVFAALADVIILA 73 (290)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSSHHHHHHHHHTTSCSEEESCTTTTGGGCSEEEEC
T ss_pred ceEEEEeeCHHHHHHHHHHHhCCCCcEEEEEcCCHHHHHHHHHcCCcccccCCHHHhhcCCCEEEEc
Confidence 4688899875 334555666655678999998 444443322111111223332223348988863
No 375
>2jsc_A Transcriptional regulator RV1994C/MT2050; cadmium, transcriptional repressor, solution structure, STRU genomics; NMR {Mycobacterium tuberculosis}
Probab=35.50 E-value=17 Score=25.18 Aligned_cols=26 Identities=23% Similarity=0.262 Sum_probs=17.3
Q ss_pred HHHHHHhCCceeeeccCCCccccccCc
Q 046950 56 LMRLLVHSGCFKKTKVNGEEEAYGLTA 82 (239)
Q Consensus 56 lLr~L~~~g~l~~~~~~~~~~~y~~t~ 82 (239)
.|+.|...|++..... +..-.|.+++
T Consensus 54 ~L~~L~~~GlV~~~~~-gr~~~y~l~~ 79 (118)
T 2jsc_A 54 HLSCLRGCGLVVATYE-GRQVRYALAD 79 (118)
T ss_dssp HHHHHTTTTSEEEEEC-SSSEEEEESS
T ss_pred HHHHHHHCCceEEEEE-CCEEEEEECh
Confidence 7889999999987641 0112466665
No 376
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=34.81 E-value=36 Score=27.72 Aligned_cols=30 Identities=23% Similarity=0.492 Sum_probs=25.2
Q ss_pred cEEEecCcchHHHHH--HHHHCCCCeEEEeeh
Q 046950 177 SLVDVGGGNGTFSRI--ISEAFPGIKCTVLDL 206 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~--l~~~~P~l~~~~~Dl 206 (239)
-|+=||||.+-+..+ |+++.++++++++|.
T Consensus 67 DV~IIGaGPAGlsAA~~la~~r~G~~V~viEk 98 (326)
T 3fpz_A 67 DVIIVGAGSSGLSAAYVIAKNRPDLKVCIIES 98 (326)
T ss_dssp SEEEECCSHHHHHHHHHHHHHCTTSCEEEECS
T ss_pred CEEEECCCHHHHHHHHHHHHhCCCCeEEEEEC
Confidence 499999999888766 556789999999986
No 377
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=34.09 E-value=42 Score=30.01 Aligned_cols=33 Identities=18% Similarity=0.189 Sum_probs=27.2
Q ss_pred CCCcEEEecCcchHH--HHHHHHHCCCCeEEEeeh
Q 046950 174 GLGSLVDVGGGNGTF--SRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~--~~~l~~~~P~l~~~~~Dl 206 (239)
...+||=||||.+-+ +..|++..|+.+++++|.
T Consensus 35 ~~~~VvIIGgG~AGl~aA~~L~~~~~g~~V~vie~ 69 (588)
T 3ics_A 35 GSRKIVVVGGVAGGASVAARLRRLSEEDEIIMVER 69 (588)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCSSSEEEEECS
T ss_pred cCCCEEEECCcHHHHHHHHHHHhhCcCCCEEEEEC
Confidence 457899999998876 446677788999999987
No 378
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=33.86 E-value=26 Score=30.89 Aligned_cols=33 Identities=24% Similarity=0.434 Sum_probs=24.9
Q ss_pred CCcEEEecCcchHHHHHHHHHC------------CCCeEEEeehH
Q 046950 175 LGSLVDVGGGNGTFSRIISEAF------------PGIKCTVLDLP 207 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~------------P~l~~~~~Dlp 207 (239)
...||=||||.+-.+.++.-+. +.++++++|.+
T Consensus 7 ~~dVvIVGgG~aGl~aA~~La~~~~~~~~~~~~~~G~~V~liE~~ 51 (526)
T 2pyx_A 7 ITEIIIVGGGTAGWITAGLLAAEHNVDKGVLAHSPKLNITLIESP 51 (526)
T ss_dssp CCEEEEECCHHHHHHHHHHHHHHHHEETTEECSSCSCEEEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhhccccccccCCCCCeEEEEeCC
Confidence 4579999999977765544433 78999999974
No 379
>2vvr_A Ribose-5-phosphate isomerase B; RPIB, carbohydrate metabolism, pentose phosphate pathway; 2.10A {Escherichia coli} PDB: 1nn4_A
Probab=33.76 E-value=29 Score=25.50 Aligned_cols=54 Identities=19% Similarity=0.140 Sum_probs=38.1
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC--CCCeEEEEccC
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE--ADNLKYIAGDM 226 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~--~~ri~~~~gD~ 226 (239)
++....-=+.||+|.-....+.++|.+|+.+.--|.....+++ ..+|-.+++-+
T Consensus 56 ~g~~d~GIliCGTGiG~siaANKv~GIRAal~~d~~sA~~ar~hNnaNVl~lG~rv 111 (149)
T 2vvr_A 56 GGEVDGGILICGTGVGISIAANKFAGIRAVVCSEPYSAQLSRQNNDTNVLAFGSRV 111 (149)
T ss_dssp TTSSSEEEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHHHCCCEEEEETTT
T ss_pred cCCCceEEEEeCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEECccc
Confidence 3344456678999999999999999999877777776666554 33454455443
No 380
>1qbj_A Protein (double-stranded RNA specific adenosine D (ADAR1)); protein-Z-DNA complex, hydrolase-DNA complex; HET: DNA; 2.10A {Homo sapiens} SCOP: a.4.5.19 PDB: 3f21_A* 3f22_A* 3f23_A* 3irr_A* 3irq_D* 2gxb_A 2acj_A 2l54_A
Probab=33.42 E-value=46 Score=21.53 Aligned_cols=50 Identities=16% Similarity=0.248 Sum_probs=29.4
Q ss_pred HHhChhhHhhhCC--CCCCHHH--------------HHHHHHhCCceeeeccCCCccccccCcccccc
Q 046950 36 IELGIADIIHSHG--RAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLTAASTLL 87 (239)
Q Consensus 36 ~~lglfd~L~~~~--~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t~~s~~l 87 (239)
.+..|++.|.+.+ .++|+.+ .|.-|...|++..... .++.|...+.....
T Consensus 11 ~~~~IL~~L~~~~pg~~~t~~eLA~~Lgvsr~tV~~~L~~Le~~G~I~~~g~--~~~~W~i~~~~~~~ 76 (81)
T 1qbj_A 11 QEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAG--TPPLWKIAVSTQAW 76 (81)
T ss_dssp HHHHHHHHHHHHCTTCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEESS--SSCEEEEC------
T ss_pred HHHHHHHHHHHcCCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEecCC--CCCeeEEeCcHHhc
Confidence 3455667776642 2677766 6778889999987642 24677777655433
No 381
>2q7x_A UPF0052 protein SP_1565; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; HET: MLY MSE; 2.00A {Streptococcus pneumoniae}
Probab=33.39 E-value=30 Score=28.98 Aligned_cols=28 Identities=21% Similarity=0.287 Sum_probs=19.5
Q ss_pred CCcEEEecCcchHH--HHHHHHHCCCCeEE
Q 046950 175 LGSLVDVGGGNGTF--SRIISEAFPGIKCT 202 (239)
Q Consensus 175 ~~~vvDVGGG~G~~--~~~l~~~~P~l~~~ 202 (239)
..+||=+|||+|.. +..|.+...++.++
T Consensus 4 ~~~IV~igGGtGl~~ll~gLk~~~~~iTaI 33 (326)
T 2q7x_A 4 XPXITVIGGGTGSPVILXSLREXDVEIAAI 33 (326)
T ss_dssp CCEEEEECCCTTHHHHHHHHHHSSCEEEEE
T ss_pred CCeEEEEcCcccHHHHHHHhccCCCCeEEE
Confidence 35899999999965 55666554566643
No 382
>3ph3_A Ribose-5-phosphate isomerase; alpha-beta-alpha sandwich fold; HET: RB5; 2.07A {Clostridium thermocellum} SCOP: c.121.1.1 PDB: 3ph4_A*
Probab=33.35 E-value=15 Score=27.68 Aligned_cols=53 Identities=21% Similarity=0.139 Sum_probs=37.5
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC--CCCeEEEEccC
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE--ADNLKYIAGDM 226 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~--~~ri~~~~gD~ 226 (239)
+....-=+.||+|.-....+.++|.+|+.+.--|.....+++ ..+|-.+++-+
T Consensus 76 g~~d~GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~~aR~hNnANVL~lG~Rv 130 (169)
T 3ph3_A 76 GECDRGIVICGTGLGISIAANKVPGIRAAVCTNSYMARMSREHNDANILALGERV 130 (169)
T ss_dssp TSSSEEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHTTCCSEEEEETTT
T ss_pred CCCCEEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 333445678999999999999999999887777776666654 33454555444
No 383
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=33.21 E-value=32 Score=27.01 Aligned_cols=63 Identities=16% Similarity=0.092 Sum_probs=37.5
Q ss_pred CCCcEEEecCcchHHHH--HHHHHCCCCeEEEeeh--HHHHhcCCCCCCeEEEEccCCC-CCCCceEEEe
Q 046950 174 GLGSLVDVGGGNGTFSR--IISEAFPGIKCTVLDL--PHAVANLPEADNLKYIAGDMFR-FIPPADAFLF 238 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~--~l~~~~P~l~~~~~Dl--p~vi~~a~~~~ri~~~~gD~f~-~~p~~D~~~l 238 (239)
..++||=||||.=.... .|++. +.++++++. .+.+....+..+|+++.++|-. .+..+|+++.
T Consensus 30 ~gk~VLVVGgG~va~~ka~~Ll~~--GA~VtVvap~~~~~l~~l~~~~~i~~i~~~~~~~dL~~adLVIa 97 (223)
T 3dfz_A 30 KGRSVLVVGGGTIATRRIKGFLQE--GAAITVVAPTVSAEINEWEAKGQLRVKRKKVGEEDLLNVFFIVV 97 (223)
T ss_dssp TTCCEEEECCSHHHHHHHHHHGGG--CCCEEEECSSCCHHHHHHHHTTSCEEECSCCCGGGSSSCSEEEE
T ss_pred CCCEEEEECCCHHHHHHHHHHHHC--CCEEEEECCCCCHHHHHHHHcCCcEEEECCCCHhHhCCCCEEEE
Confidence 45789999998655533 23333 556777764 2222222225678888887754 3555888764
No 384
>2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A
Probab=33.21 E-value=50 Score=26.68 Aligned_cols=51 Identities=18% Similarity=0.298 Sum_probs=31.6
Q ss_pred cEEEecCcchHHHHHHHHH---CCCCeEEEeehHH-HHhcCCCCCCeEEEEccCCC
Q 046950 177 SLVDVGGGNGTFSRIISEA---FPGIKCTVLDLPH-AVANLPEADNLKYIAGDMFR 228 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~---~P~l~~~~~Dlp~-vi~~a~~~~ri~~~~gD~f~ 228 (239)
+|+=. ||+|..+..++++ .++.+++++++.. -.+......+++++.+|+.+
T Consensus 2 ~vlVt-GatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~ 56 (345)
T 2bll_A 2 RVLIL-GVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISI 56 (345)
T ss_dssp EEEEE-TCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTT
T ss_pred eEEEE-CCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccC
Confidence 34444 4566666665553 3567888888832 22222235689999999976
No 385
>3ono_A Ribose/galactose isomerase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE; 1.75A {Vibrio parahaemolyticus}
Probab=33.07 E-value=14 Score=28.99 Aligned_cols=52 Identities=19% Similarity=0.192 Sum_probs=37.5
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC--CCCeEEEEc
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE--ADNLKYIAG 224 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~--~~ri~~~~g 224 (239)
++....-=+.||+|.-....+.++|.+|+.+.--|.....+++ ..+|-.+++
T Consensus 64 ~g~~d~GIliCGTGiG~siaANKv~GIRAAlc~d~~sA~laR~hNnANVL~lG~ 117 (214)
T 3ono_A 64 SKAVDFVVTGCGTGQGALMSCNLHPGVVCGYCLEPSDAFLFNQINNGNAISLAF 117 (214)
T ss_dssp TTSCSEEEEEESSSHHHHHHHHTSTTCCEEECSSHHHHHHHHHHTCCSEEEEES
T ss_pred cCCCCEEEEEcCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHHcCCcEEEecC
Confidence 3444556688999999999999999999877777776666554 334444444
No 386
>3c5y_A Ribose/galactose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 1.81A {Novosphingobium aromaticivorans}
Probab=33.02 E-value=14 Score=29.25 Aligned_cols=51 Identities=24% Similarity=0.336 Sum_probs=37.1
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC--CCCeEEEEc
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE--ADNLKYIAG 224 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~--~~ri~~~~g 224 (239)
+....-=+.||+|.-....+.++|.+|+.+.--|.....+++ ..+|-.+++
T Consensus 82 g~~d~GIliCGTGiG~sIAANKv~GIRAAlc~d~~sA~laR~HNnANVL~lGa 134 (231)
T 3c5y_A 82 GAADFVVTGCGTGMGSMLAANAMPGVFCGLVIDPTDAFLFGQINDGNAISMPY 134 (231)
T ss_dssp TSCSEEEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHHTCCSEEEEES
T ss_pred CCCCeEEEEcCCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhcCccEEEECC
Confidence 344466688999999999999999999877777776666654 334444444
No 387
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=32.80 E-value=45 Score=28.59 Aligned_cols=31 Identities=13% Similarity=0.187 Sum_probs=24.6
Q ss_pred cEEEecCcchHHH--HHHHHHCCCCeEEEeehH
Q 046950 177 SLVDVGGGNGTFS--RIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 177 ~vvDVGGG~G~~~--~~l~~~~P~l~~~~~Dlp 207 (239)
.||=||||.+.+. ..+++..|+.+++++|..
T Consensus 2 dvvIIGgG~aGl~aA~~l~~~~~g~~V~lie~~ 34 (452)
T 2cdu_A 2 KVIVVGCTHAGTFAVKQTIADHPDADVTAYEMN 34 (452)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTCEEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHhhCcCCcEEEEECC
Confidence 5888999987764 456667789999999973
No 388
>3bdd_A Regulatory protein MARR; putative multiple antibiotic-resistance repressor, structura genomics, joint center for structural genomics, JCSG; 2.20A {Streptococcus suis}
Probab=32.62 E-value=53 Score=22.61 Aligned_cols=52 Identities=13% Similarity=0.114 Sum_probs=33.6
Q ss_pred HHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccC--CCccccccCccccccc
Q 046950 36 IELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVN--GEEEAYGLTAASTLLI 88 (239)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~--~~~~~y~~t~~s~~l~ 88 (239)
.++.++..|... ++.+..+ .++-|...|++.+.... ...-.|.+|+.++.+.
T Consensus 32 ~~~~iL~~l~~~-~~~~~~ela~~l~is~~~vs~~l~~L~~~gli~~~~~~~d~r~~~~~lT~~G~~~~ 99 (142)
T 3bdd_A 32 TRYSILQTLLKD-APLHQLALQERLQIDRAAVTRHLKLLEESGYIIRKRNPDNQREVLVWPTEQAREAL 99 (142)
T ss_dssp HHHHHHHHHHHH-CSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSSTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCCCCCCCeeEEEECHHHHHHH
Confidence 445567777664 4677766 78899999999987421 0112366777776444
No 389
>2ppw_A Conserved domain protein; the putative RPIB, PSI-2, protein initiative, MCSG, structural genomics, midwest center for S genomics; HET: MSE; 2.01A {Streptococcus pneumoniae}
Probab=31.71 E-value=12 Score=29.35 Aligned_cols=52 Identities=21% Similarity=0.270 Sum_probs=37.7
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC--CCCeEEEEc
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE--ADNLKYIAG 224 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~--~~ri~~~~g 224 (239)
++....-=+.||+|.-....+.++|.+|+.+.--|.....+++ ..+|-.+++
T Consensus 65 ~g~~d~GIliCGTGiG~sIAANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~ 118 (216)
T 2ppw_A 65 TKAVDFVVTGCGTGVGAMLALNSFPGVVCGLAVDPTDAYLYSQINGGNALSIPY 118 (216)
T ss_dssp TTSCSEEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHHTCCSEEEEES
T ss_pred cCCCCeEEEEcCCcHHHHHHhhcCCCeEEEEeCCHHHHHHHHHhcCceEEEeCC
Confidence 3444566788999999999999999999877777776666553 334444444
No 390
>3k7p_A Ribose 5-phosphate isomerase; pentose phosphate pathway, type B ribose 5-phosphate isomera (RPIB), R5P; 1.40A {Trypanosoma cruzi} SCOP: c.121.1.0 PDB: 3k7s_A* 3k7o_A* 3k8c_A* 3m1p_A
Probab=31.63 E-value=21 Score=27.12 Aligned_cols=52 Identities=13% Similarity=0.128 Sum_probs=36.6
Q ss_pred CCcEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC--CCCeEEEEccC
Q 046950 175 LGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE--ADNLKYIAGDM 226 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~--~~ri~~~~gD~ 226 (239)
....-=+.||+|.-....+.++|.+|+.+.--|.....+++ ..+|-.+++-+
T Consensus 81 ~~d~GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~Rv 134 (179)
T 3k7p_A 81 EVEFGVLAAGSGIGMSIAANKVPGVRAALCHDHYTAAMSRIHNDANIVCVGERT 134 (179)
T ss_dssp SSSEEEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEETTT
T ss_pred CCCEEEEEccCcHHHhhHhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcccc
Confidence 33445577899999999999999999877777776666654 33454454443
No 391
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=31.56 E-value=40 Score=29.98 Aligned_cols=33 Identities=24% Similarity=0.486 Sum_probs=25.0
Q ss_pred CCcEEEecCcchHHHHH--HHHHC-CCCeEEEeehH
Q 046950 175 LGSLVDVGGGNGTFSRI--ISEAF-PGIKCTVLDLP 207 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~--l~~~~-P~l~~~~~Dlp 207 (239)
...||-||||..-.+.+ |++.+ +.++++++|.+
T Consensus 25 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~ 60 (550)
T 2e4g_A 25 IDKILIVGGGTAGWMAASYLGKALQGTADITLLQAP 60 (550)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHTTTSSEEEEEECC
T ss_pred CCcEEEECCCHHHHHHHHHHHhhcCCCCcEEEEeCC
Confidence 56799999998776554 44444 88999999973
No 392
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=31.45 E-value=36 Score=30.03 Aligned_cols=32 Identities=13% Similarity=0.161 Sum_probs=24.2
Q ss_pred CCcEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 175 LGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
-++||=||||.|.+..+..-+..+.+++++|.
T Consensus 42 KprVVIIGgG~AGl~~A~~L~~~~~~VtLId~ 73 (502)
T 4g6h_A 42 KPNVLILGSGWGAISFLKHIDTKKYNVSIISP 73 (502)
T ss_dssp SCEEEEECSSHHHHHHHHHSCTTTCEEEEEES
T ss_pred CCCEEEECCcHHHHHHHHHhhhCCCcEEEECC
Confidence 35899999999887655444445788999985
No 393
>1ub9_A Hypothetical protein PH1061; helix-turn-helix motif, winged helix motif, structural genom transcription; 2.05A {Pyrococcus horikoshii} SCOP: a.4.5.28
Probab=31.42 E-value=21 Score=23.28 Aligned_cols=30 Identities=23% Similarity=0.286 Sum_probs=18.9
Q ss_pred HHHHHHhCCceeeecc--CCCccccccCcccc
Q 046950 56 LMRLLVHSGCFKKTKV--NGEEEAYGLTAAST 85 (239)
Q Consensus 56 lLr~L~~~g~l~~~~~--~~~~~~y~~t~~s~ 85 (239)
.|+.|...|++.+... +.....|.+|+.+.
T Consensus 50 ~l~~L~~~gli~~~~~~~~~r~~~~~lt~~g~ 81 (100)
T 1ub9_A 50 HIRVLERNGLVKTYKVIADRPRTVVEITDFGM 81 (100)
T ss_dssp HHHHHHHTTSEEEEEECSSSCEEEEEECHHHH
T ss_pred HHHHHHHCCCEEEEecCCCcceEEEEECHHHH
Confidence 7889999999996531 00122466666554
No 394
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=31.36 E-value=50 Score=28.24 Aligned_cols=31 Identities=10% Similarity=0.267 Sum_probs=24.3
Q ss_pred cEEEecCcchHHH--HHHHHHCCCCeEEEeehH
Q 046950 177 SLVDVGGGNGTFS--RIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 177 ~vvDVGGG~G~~~--~~l~~~~P~l~~~~~Dlp 207 (239)
.||=||||.+.+. ..+++..|+.+++++|..
T Consensus 2 dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~~ 34 (447)
T 1nhp_A 2 KVIVLGSSHGGYEAVEELLNLHPDAEIQWYEKG 34 (447)
T ss_dssp EEEEECSSHHHHHHHHHHHHHCTTSEEEEEESS
T ss_pred eEEEECCCHHHHHHHHHHHHhCcCCeEEEEECC
Confidence 5888999988764 456666789999999873
No 395
>1r7j_A Conserved hypothetical protein SSO10A; winged helix-turn-helix, two-stranded antiparallel coiled CO structural genomics, PSI; 1.47A {Sulfolobus solfataricus} SCOP: a.4.5.49 PDB: 1xsx_A
Probab=31.01 E-value=35 Score=22.72 Aligned_cols=28 Identities=18% Similarity=0.350 Sum_probs=24.3
Q ss_pred HHHHHHhCCceeeeccCCCccccccCccccccc
Q 046950 56 LMRLLVHSGCFKKTKVNGEEEAYGLTAASTLLI 88 (239)
Q Consensus 56 lLr~L~~~g~l~~~~~~~~~~~y~~t~~s~~l~ 88 (239)
.++.|...|++++.. +.|.+|+.++.+.
T Consensus 40 ~l~~L~~~GLI~~~~-----~~~~LT~kG~~~l 67 (95)
T 1r7j_A 40 YIKMLMDLEIIRQEG-----KQYMLTKKGEELL 67 (95)
T ss_dssp HHHHHHHTTSEEEET-----TEEEECHHHHHHH
T ss_pred HHHHHHHCCCeEEEC-----CeeEEChhHHHHH
Confidence 899999999999984 6799999998554
No 396
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=30.77 E-value=37 Score=25.50 Aligned_cols=30 Identities=17% Similarity=0.236 Sum_probs=23.8
Q ss_pred cEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 177 SLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
-|+=||+|..-.+.++.-+--.++++++|.
T Consensus 4 dV~IIGaGpaGL~aA~~La~~G~~V~v~Ek 33 (336)
T 3kkj_A 4 PIAIIGTGIAGLSAAQALTAAGHQVHLFDK 33 (336)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEEC
Confidence 388899998888766655555899999996
No 397
>2jt1_A PEFI protein; solution structure, winged helix-turn-helix, transcripti regulatory protein, structural genomics, PSI-2; NMR {Salmonella typhimurium LT2}
Probab=30.59 E-value=40 Score=21.64 Aligned_cols=15 Identities=20% Similarity=0.375 Sum_probs=13.2
Q ss_pred HHHHHHhCCceeeec
Q 046950 56 LMRLLVHSGCFKKTK 70 (239)
Q Consensus 56 lLr~L~~~g~l~~~~ 70 (239)
-|..|...|++.+..
T Consensus 44 ~L~~Le~kG~I~R~~ 58 (77)
T 2jt1_A 44 YLEQLHDVGVLEKVN 58 (77)
T ss_dssp HHHHHHHTTSEEEES
T ss_pred HHHHHHHCCcEEecC
Confidence 688999999999985
No 398
>3r0a_A Putative transcriptional regulator; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.31A {Methanosarcina mazei}
Probab=30.55 E-value=36 Score=23.62 Aligned_cols=34 Identities=9% Similarity=0.190 Sum_probs=24.9
Q ss_pred HhChhhHhhhCCCC-CCHHH--------------HHHHHHhCCceeeec
Q 046950 37 ELGIADIIHSHGRA-ITLSE--------------LMRLLVHSGCFKKTK 70 (239)
Q Consensus 37 ~lglfd~L~~~~~~-~t~~e--------------lLr~L~~~g~l~~~~ 70 (239)
+..|+..|...++| +|+.| .|+.|...|++.+..
T Consensus 28 e~~il~~L~~~~~~~~t~~eLa~~l~~s~sTV~r~L~~L~~~GlV~r~~ 76 (123)
T 3r0a_A 28 DLNVMKSFLNEPDRWIDTDALSKSLKLDVSTVQRSVKKLHEKEILQRSQ 76 (123)
T ss_dssp HHHHHHHHHHSTTCCEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHCCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeeC
Confidence 45566667665455 77777 788899999999863
No 399
>3f3x_A Transcriptional regulator, MARR family, putative; DNA binding protein, DNA-binding, transcription regulation; 1.90A {Sulfolobus solfataricus}
Probab=30.50 E-value=57 Score=22.65 Aligned_cols=53 Identities=8% Similarity=0.095 Sum_probs=33.9
Q ss_pred HHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCC--CccccccCcccccccc
Q 046950 35 AIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNG--EEEAYGLTAASTLLIK 89 (239)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~--~~~~y~~t~~s~~l~~ 89 (239)
..++.++..|...+ + +..+ +++-|...|++.+..... ..-.+.+|+.++.+..
T Consensus 37 ~~~~~iL~~l~~~~-~-~~~~la~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~~ 105 (144)
T 3f3x_A 37 YLDFSILKATSEEP-R-SMVYLANRYFVTQSAITAAVDKLEAKGLVRRIRDSKDRRIVIVEITPKGRQVLL 105 (144)
T ss_dssp HHHHHHHHHHHHSC-E-EHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHHHCC-C-CHHHHHHHHCCChhHHHHHHHHHHHCCCEEeccCCCCCceEEEEECHHHHHHHH
Confidence 34556777776643 3 6665 889999999999875200 0013778887775543
No 400
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=30.45 E-value=37 Score=25.27 Aligned_cols=35 Identities=14% Similarity=0.116 Sum_probs=26.6
Q ss_pred hcCCCcEEEec--CcchHHHHHHHHHCCCCeEEEeehH
Q 046950 172 FEGLGSLVDVG--GGNGTFSRIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 172 ~~~~~~vvDVG--GG~G~~~~~l~~~~P~l~~~~~Dlp 207 (239)
....++|+.+| ||.|..+..+++.. ..++++.|..
T Consensus 36 ~~~g~~vlV~Ga~ggiG~~~~~~~~~~-G~~V~~~~~~ 72 (198)
T 1pqw_A 36 LSPGERVLIHSATGGVGMAAVSIAKMI-GARIYTTAGS 72 (198)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHH-TCEEEEEESS
T ss_pred CCCCCEEEEeeCCChHHHHHHHHHHHc-CCEEEEEeCC
Confidence 44567899999 57788888888765 4688888873
No 401
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=30.29 E-value=39 Score=28.78 Aligned_cols=31 Identities=26% Similarity=0.521 Sum_probs=23.7
Q ss_pred CcEEEecCcchHHHHH--HHHHCCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTFSRI--ISEAFPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~--l~~~~P~l~~~~~Dl 206 (239)
++||=||||.+....+ |++..++.+++++|.
T Consensus 3 ~~vvIIGgG~aGl~aA~~L~~~~~g~~Vtlie~ 35 (430)
T 3h28_A 3 KHVVVIGGGVGGIATAYNLRNLMPDLKITLISD 35 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred CCEEEECccHHHHHHHHHHHcCCCCCeEEEECC
Confidence 4789999998877543 444348899999987
No 402
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=30.14 E-value=34 Score=28.84 Aligned_cols=31 Identities=13% Similarity=0.254 Sum_probs=23.2
Q ss_pred CcEEEecCcchHHHHH--HHH-HCCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTFSRI--ISE-AFPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~--l~~-~~P~l~~~~~Dl 206 (239)
++||=||||.+....+ |++ ..++.+++++|.
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~~V~vie~ 35 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKADVKVINK 35 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGSEEEEEES
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCCeEEEEeC
Confidence 4689999998877554 344 337899999986
No 403
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=30.04 E-value=47 Score=28.53 Aligned_cols=31 Identities=29% Similarity=0.629 Sum_probs=26.3
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
..|+=||||.+-+..+..-+..+.+++++|.
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~V~liE~ 35 (450)
T 1ges_A 5 YDYIAIGGGSGGIASINRAAMYGQKCALIEA 35 (450)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEEES
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCeEEEEcC
Confidence 3589999999998887777778999999995
No 404
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=29.87 E-value=39 Score=28.02 Aligned_cols=30 Identities=23% Similarity=0.215 Sum_probs=23.6
Q ss_pred cEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 177 SLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
+|+=||||.+-.+.++.-+.-+++++|+|.
T Consensus 3 ~V~IVGaGpaGl~~A~~L~~~G~~v~v~Er 32 (412)
T 4hb9_A 3 HVGIIGAGIGGTCLAHGLRKHGIKVTIYER 32 (412)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCEEEEECS
T ss_pred EEEEECcCHHHHHHHHHHHhCCCCEEEEec
Confidence 689999998777666555555889999986
No 405
>2p0y_A Hypothetical protein LP_0780; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 3.00A {Lactobacillus plantarum}
Probab=29.87 E-value=29 Score=29.23 Aligned_cols=28 Identities=21% Similarity=0.256 Sum_probs=18.9
Q ss_pred CCCcEEEecCcchHH--HHHHHHHCCCCeE
Q 046950 174 GLGSLVDVGGGNGTF--SRIISEAFPGIKC 201 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~--~~~l~~~~P~l~~ 201 (239)
...+||=+|||+|.. +..|.+.-.++.+
T Consensus 9 ~~~kIVvigGGtGl~~ll~gLk~~~~~iTa 38 (341)
T 2p0y_A 9 QRPKIVVIGGGTGLPVVLNGLRKQAVDITA 38 (341)
T ss_dssp -CCEEEEECCGGGHHHHHHHHHHSSSEEEE
T ss_pred CCCeEEEECCcccHHHHHHHHHhCCCCeEE
Confidence 346899999999965 5566555455654
No 406
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=29.64 E-value=54 Score=27.69 Aligned_cols=66 Identities=11% Similarity=0.014 Sum_probs=47.6
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHH--------HHhcC-----CCCCCeEEEEccCCC--C-CCC-ceE
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPH--------AVANL-----PEADNLKYIAGDMFR--F-IPP-ADA 235 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~--------vi~~a-----~~~~ri~~~~gD~f~--~-~p~-~D~ 235 (239)
....+|||+-+|.|.=+..+++..++-+++..|... .+... +...++.+...|... + .+. ||.
T Consensus 147 ~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~fD~ 226 (359)
T 4fzv_A 147 QPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTYDR 226 (359)
T ss_dssp CTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCEEE
T ss_pred CCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccCCE
Confidence 456799999999999999999988777789999832 11111 124578889888755 2 344 999
Q ss_pred EEe
Q 046950 236 FLF 238 (239)
Q Consensus 236 ~~l 238 (239)
|++
T Consensus 227 VLl 229 (359)
T 4fzv_A 227 VLV 229 (359)
T ss_dssp EEE
T ss_pred EEE
Confidence 875
No 407
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=29.45 E-value=80 Score=25.94 Aligned_cols=34 Identities=21% Similarity=0.238 Sum_probs=29.1
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHH
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPH 208 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~ 208 (239)
.....|||-=||+|+.+.+..+. +-+++++|+++
T Consensus 251 ~~~~~VlDpF~GsGtt~~aa~~~--gr~~ig~e~~~ 284 (323)
T 1boo_A 251 EPDDLVVDIFGGSNTTGLVAERE--SRKWISFEMKP 284 (323)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHT--TCEEEEEESCH
T ss_pred CCCCEEEECCCCCCHHHHHHHHc--CCCEEEEeCCH
Confidence 34578999999999999998887 57899999954
No 408
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=29.26 E-value=36 Score=29.14 Aligned_cols=31 Identities=19% Similarity=0.304 Sum_probs=23.3
Q ss_pred CcEEEecCcchHHHHHHHHH---CCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTFSRIISEA---FPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~---~P~l~~~~~Dl 206 (239)
++||=||||.+....+..-+ .++.+++++|.
T Consensus 5 ~~vvIIGgG~aGl~aA~~L~~~~~~g~~Vtlie~ 38 (437)
T 3sx6_A 5 AHVVILGAGTGGMPAAYEMKEALGSGHEVTLISA 38 (437)
T ss_dssp CEEEEECCSTTHHHHHHHHHHHHGGGSEEEEECS
T ss_pred CcEEEECCcHHHHHHHHHHhccCCCcCEEEEEeC
Confidence 57999999988775443333 37899999986
No 409
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=29.03 E-value=42 Score=29.61 Aligned_cols=33 Identities=21% Similarity=0.371 Sum_probs=24.5
Q ss_pred CCcEEEecCcchHHHHHH--HHHC-CCCeEEEeehH
Q 046950 175 LGSLVDVGGGNGTFSRII--SEAF-PGIKCTVLDLP 207 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l--~~~~-P~l~~~~~Dlp 207 (239)
...||=||||..-.+.++ ++.+ +.++++++|.+
T Consensus 5 ~~dVvIVGgG~aGl~aA~~La~~~~~G~~V~liE~~ 40 (538)
T 2aqj_A 5 IKNIVIVGGGTAGWMAASYLVRALQQQANITLIESA 40 (538)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCCSSCEEEEEECS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhcCCCCEEEEECCC
Confidence 357999999987765544 4444 78999999973
No 410
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=29.00 E-value=55 Score=28.03 Aligned_cols=32 Identities=19% Similarity=0.358 Sum_probs=25.7
Q ss_pred CcEEEecCcchHH--HHHHHHHCCCCeEEEeehH
Q 046950 176 GSLVDVGGGNGTF--SRIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 176 ~~vvDVGGG~G~~--~~~l~~~~P~l~~~~~Dlp 207 (239)
.+||=||||.+-+ +..|++..|+.+++++|..
T Consensus 4 ~~VvIIGgG~aGl~aA~~L~~~~~~~~V~vie~~ 37 (449)
T 3kd9_A 4 KKVVIIGGGAAGMSAASRVKRLKPEWDVKVFEAT 37 (449)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSS
T ss_pred CcEEEECCcHHHHHHHHHHHHhCcCCCEEEEECC
Confidence 5799999998866 4467777889999999873
No 411
>3sgw_A Ribose 5-phosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, valley fever; 1.70A {Coccidioides immitis} PDB: 3sdw_A 3qd5_A*
Probab=28.90 E-value=25 Score=26.84 Aligned_cols=50 Identities=14% Similarity=0.102 Sum_probs=35.4
Q ss_pred cEEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC--CCCeEEEEccC
Q 046950 177 SLVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE--ADNLKYIAGDM 226 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~--~~ri~~~~gD~ 226 (239)
..-=+-||+|.-....+.++|.+|+.+.--+.....+++ ..+|-.+++-+
T Consensus 91 d~GIliCGTGiG~sIaANKv~GIRAAlc~d~~sA~laR~HNnANVL~lG~Rv 142 (184)
T 3sgw_A 91 DRALMICGTGLGVAISANKVPGIRAVTAHDTFSVERAILSNDAQVLCFGQRV 142 (184)
T ss_dssp SEEEEEESSSHHHHHHHHTSTTCCEEECCSHHHHHHHHHTTCCSEEEEETTT
T ss_pred cEEEEEcCCcHHHhhhhhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEchhh
Confidence 345567899999999999999999877777776666654 33444444443
No 412
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=28.89 E-value=40 Score=27.02 Aligned_cols=31 Identities=10% Similarity=0.171 Sum_probs=25.1
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
..||=||||.+-+..+..-+..+.+++++|.
T Consensus 8 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 38 (332)
T 3lzw_A 8 YDITIIGGGPVGLFTAFYGGMRQASVKIIES 38 (332)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHHCCCCEEEEEc
Confidence 4699999999888776655556889999997
No 413
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=28.74 E-value=53 Score=29.01 Aligned_cols=31 Identities=10% Similarity=0.114 Sum_probs=25.1
Q ss_pred CcEEEecCcchHH--HHHHHHHCCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTF--SRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~--~~~l~~~~P~l~~~~~Dl 206 (239)
++||=||||.+.+ +..|++..|+.+++++|.
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~~V~lie~ 34 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETAEIIMFER 34 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSSEEEEECS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCCCEEEEEC
Confidence 4689999998766 446677788999999987
No 414
>2hr3_A Probable transcriptional regulator; MCSG, structural genomics, PSI-2, protein structure initiati midwest center for structural genomics; 2.40A {Pseudomonas aeruginosa} SCOP: a.4.5.28
Probab=28.71 E-value=44 Score=23.32 Aligned_cols=54 Identities=20% Similarity=0.215 Sum_probs=33.5
Q ss_pred HHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccC-C-CccccccCccccccc
Q 046950 35 AIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVN-G-EEEAYGLTAASTLLI 88 (239)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~-~-~~~~y~~t~~s~~l~ 88 (239)
..++.++..|....++.+..+ +++.|...|++++.... + ..-.+.+|+.++.+.
T Consensus 35 ~~~~~iL~~l~~~~~~~~~~~la~~l~i~~~~vs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 104 (147)
T 2hr3_A 35 FSQLVVLGAIDRLGGDVTPSELAAAERMRSSNLAALLRELERGGLIVRHADPQDGRRTRVSLSSEGRRNL 104 (147)
T ss_dssp HHHHHHHHHHHHTTSCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEC------CCEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHhCCChhhHHHHHHHHHHCCCEeeCCCCCCCCceeeEECHHHHHHH
Confidence 455667777766125777776 78999999999987410 0 111256666665443
No 415
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=28.67 E-value=48 Score=28.89 Aligned_cols=31 Identities=26% Similarity=0.530 Sum_probs=24.9
Q ss_pred cEEEecCcchHH--HHHHHHHCC-CCeEEEeehH
Q 046950 177 SLVDVGGGNGTF--SRIISEAFP-GIKCTVLDLP 207 (239)
Q Consensus 177 ~vvDVGGG~G~~--~~~l~~~~P-~l~~~~~Dlp 207 (239)
.||=||||.+-+ +..+++..| ..+++++|..
T Consensus 4 dVvIIGgG~aGl~aA~~l~~~~~~G~~V~liE~~ 37 (499)
T 1xdi_A 4 RIVILGGGPAGYEAALVAATSHPETTQVTVIDCD 37 (499)
T ss_dssp EEEEECCSHHHHHHHHHHHHHCTTTEEEEEEESS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCCcCEEEEEeCC
Confidence 589999998876 446677777 8999999974
No 416
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=28.41 E-value=34 Score=29.86 Aligned_cols=33 Identities=24% Similarity=0.272 Sum_probs=23.8
Q ss_pred CcEEEecCcchHHHHHHHHHC---CCCeEEEeehHH
Q 046950 176 GSLVDVGGGNGTFSRIISEAF---PGIKCTVLDLPH 208 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~---P~l~~~~~Dlp~ 208 (239)
..||=||||..-.+.++.-+. +.++++++|..+
T Consensus 3 ~dVvIVGgG~aGl~~A~~La~~~~~G~~V~lvE~~~ 38 (511)
T 2weu_A 3 RSVVIVGGGTAGWMTASYLKAAFDDRIDVTLVESGN 38 (511)
T ss_dssp CEEEEECCHHHHHHHHHHHHHHHGGGSEEEEEEC--
T ss_pred ceEEEECCCHHHHHHHHHHHhhcCCCCEEEEEecCC
Confidence 368889999887766544444 789999999854
No 417
>3lwf_A LIN1550 protein, putative transcriptional regulator; structural genomics, JOI for structural genomics, JCSG; HET: SO4; 2.06A {Listeria innocua}
Probab=28.22 E-value=77 Score=23.25 Aligned_cols=49 Identities=22% Similarity=0.300 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCccccccCc
Q 046950 28 SSMSLKCAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLTA 82 (239)
Q Consensus 28 ~~~~L~~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t~ 82 (239)
.-.+|++.+.+.. ...++|+|.++ ++..|...|++..... ..|.|.+++
T Consensus 26 ~~yAlr~L~~LA~----~~~~~~~s~~eIA~~~~i~~~~l~kil~~L~~aGlv~s~rG--~~GGy~Lar 88 (159)
T 3lwf_A 26 GRYGLTITLELAK----RIGDGPISLRSIAQDKNLSEHYLEQLIGPLRNAGIVKSIRG--AHGGYVLNG 88 (159)
T ss_dssp HHHHHHHHHHHHH----TTTSCCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECS--TTCEEEECS
T ss_pred HHHHHHHHHHHHh----cCCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCeEEEecC--CCCceEecC
Confidence 3445555544432 12225777776 8889999999997752 245677654
No 418
>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}
Probab=28.04 E-value=53 Score=27.05 Aligned_cols=52 Identities=15% Similarity=0.334 Sum_probs=33.1
Q ss_pred CCcEEEecCcchHHHHHHHHHC---CCCeEEEeehHH-HHhcCCCCCCeEEEEccCC
Q 046950 175 LGSLVDVGGGNGTFSRIISEAF---PGIKCTVLDLPH-AVANLPEADNLKYIAGDMF 227 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~---P~l~~~~~Dlp~-vi~~a~~~~ri~~~~gD~f 227 (239)
.++|+=.| |+|..+..++++. ++.+++++++.. -.+......+++++.+|+.
T Consensus 24 ~~~vlVtG-atG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~ 79 (372)
T 3slg_A 24 AKKVLILG-VNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDIT 79 (372)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTT
T ss_pred CCEEEEEC-CCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccC
Confidence 35677555 5566655555543 677899999843 2222222468999999997
No 419
>2w57_A Ferric uptake regulation protein; gene regulation, transcription regulation, transport, iron, repressor, DNA-binding, transcription; 2.60A {Vibrio cholerae}
Probab=28.02 E-value=22 Score=25.89 Aligned_cols=21 Identities=14% Similarity=0.327 Sum_probs=16.0
Q ss_pred CCCHHH---HHHHHHhCCceeeec
Q 046950 50 AITLSE---LMRLLVHSGCFKKTK 70 (239)
Q Consensus 50 ~~t~~e---lLr~L~~~g~l~~~~ 70 (239)
.++.+. .|+.|...|++.+..
T Consensus 49 ~is~aTVYR~L~~L~e~Glv~~~~ 72 (150)
T 2w57_A 49 EIGLATVYRVLNQFDDAGIVTRHH 72 (150)
T ss_dssp CCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred CCCHHHHHHHHHHHHHCCcEEEEE
Confidence 344444 788999999999874
No 420
>3bpv_A Transcriptional regulator; MARR, DNA binding, transcription factor, winged helix motif, DNA-binding; 1.40A {Methanobacterium thermoautotrophicum} PDB: 3bpx_A*
Probab=27.87 E-value=40 Score=23.19 Aligned_cols=51 Identities=22% Similarity=0.254 Sum_probs=31.4
Q ss_pred HHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCCCcc---ccccCccccccc
Q 046950 36 IELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNGEEE---AYGLTAASTLLI 88 (239)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~---~y~~t~~s~~l~ 88 (239)
.++.++..|... ++.+..+ +++-|...|++++.... .++ .+.+|+.++.+.
T Consensus 30 ~~~~iL~~l~~~-~~~~~~ela~~l~~s~~tvs~~l~~L~~~glv~~~~~~-~d~R~~~~~lT~~G~~~~ 97 (138)
T 3bpv_A 30 AQVACLLRIHRE-PGIKQDELATFFHVDKGTIARTLRRLEESGFIEREQDP-ENRRRYILEVTRRGEEII 97 (138)
T ss_dssp HHHHHHHHHHHS-TTCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEET-TEEEEEEEEECHHHHHTH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeecCC-CCceeEEeeECHhHHHHH
Confidence 344466666654 5666666 88999999999986410 011 255666665443
No 421
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=27.85 E-value=29 Score=30.82 Aligned_cols=13 Identities=31% Similarity=0.687 Sum_probs=10.5
Q ss_pred CCcEEEecCcchH
Q 046950 175 LGSLVDVGGGNGT 187 (239)
Q Consensus 175 ~~~vvDVGGG~G~ 187 (239)
...|+|||||+=.
T Consensus 138 ~~lviDIGGGStE 150 (513)
T 1u6z_A 138 RKLVIDIGGGSTE 150 (513)
T ss_dssp CEEEEEECSSCEE
T ss_pred CEEEEEECCCcEE
Confidence 5689999999643
No 422
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=27.77 E-value=88 Score=26.45 Aligned_cols=60 Identities=18% Similarity=0.206 Sum_probs=40.4
Q ss_pred cEEEecCcchHHHHHHHHHCCCCeE-EEeeh-HHHHhcCCC-CCCeEEEEccCCCC----C-------CCceEEEe
Q 046950 177 SLVDVGGGNGTFSRIISEAFPGIKC-TVLDL-PHAVANLPE-ADNLKYIAGDMFRF----I-------PPADAFLF 238 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~P~l~~-~~~Dl-p~vi~~a~~-~~ri~~~~gD~f~~----~-------p~~D~~~l 238 (239)
+++|+=||.|.+...+.++- .++ ..+|. +..++..+. -....++.+|+.+- + +.+|+++.
T Consensus 4 ~vidLFsG~GGlslG~~~aG--~~~v~avE~d~~a~~t~~~N~~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~g 77 (376)
T 3g7u_A 4 NVIDLFSGVGGLSLGAARAG--FDVKMAVEIDQHAINTHAINFPRSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIG 77 (376)
T ss_dssp EEEEETCTTSHHHHHHHHHT--CEEEEEECSCHHHHHHHHHHCTTSEEECCCGGGCCHHHHHHHHCSCCCCCEEEE
T ss_pred eEEEEccCcCHHHHHHHHCC--CcEEEEEeCCHHHHHHHHHhCCCCceEecChhhcCHHHHHhhcccCCCeeEEEe
Confidence 69999999999999999884 654 57888 334332221 23456778887652 1 23788764
No 423
>3g3z_A NMB1585, transcriptional regulator, MARR family; transcription factor, structur genomics, oxford protein production facility; 2.10A {Neisseria meningitidis serogroup B}
Probab=27.57 E-value=46 Score=23.24 Aligned_cols=53 Identities=9% Similarity=0.071 Sum_probs=33.7
Q ss_pred HHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccC-C-CccccccCccccccc
Q 046950 35 AIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVN-G-EEEAYGLTAASTLLI 88 (239)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~-~-~~~~y~~t~~s~~l~ 88 (239)
..++.++..|... ++.|..+ +++-|...|++++.... + ..-.+.+|+.++.+.
T Consensus 31 ~~q~~iL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 99 (145)
T 3g3z_A 31 YNLFAVLYTLATE-GSRTQKHIGEKWSLPKQTVSGVCKTLAGQGLIEWQEGEQDRRKRLLSLTETGKAYA 99 (145)
T ss_dssp HHHHHHHHHHHHH-CSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEECCCSSCGGGSCEEECHHHHHHH
T ss_pred HHHHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeccCCCCCceeeeeEChhHHHHH
Confidence 3455577777654 4677776 88899999999986421 0 112366777666443
No 424
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=27.12 E-value=75 Score=24.26 Aligned_cols=52 Identities=23% Similarity=0.356 Sum_probs=31.4
Q ss_pred CcEEEecCcchHHHHHHHHHC---CCCeEEEeehHHHHhcCCCCCCeEEEEccCCC
Q 046950 176 GSLVDVGGGNGTFSRIISEAF---PGIKCTVLDLPHAVANLPEADNLKYIAGDMFR 228 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~---P~l~~~~~Dlp~vi~~a~~~~ri~~~~gD~f~ 228 (239)
++|+=.| |+|..+.++++++ ...+++++++...-.......+++++.+|+.+
T Consensus 24 k~vlVtG-atG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d 78 (236)
T 3qvo_A 24 KNVLILG-AGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLN 78 (236)
T ss_dssp EEEEEET-TTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTC
T ss_pred cEEEEEe-CCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCC
Confidence 3555444 5566666666544 22678888885421111124689999999977
No 425
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=27.04 E-value=63 Score=28.02 Aligned_cols=32 Identities=13% Similarity=0.252 Sum_probs=25.3
Q ss_pred CCcEEEecCcchHH--HHHHHHHCCCCeEEEeeh
Q 046950 175 LGSLVDVGGGNGTF--SRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 175 ~~~vvDVGGG~G~~--~~~l~~~~P~l~~~~~Dl 206 (239)
..+|+=||||.+.+ +..+++..|+.+++++|.
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~vie~ 39 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRAHVDIYEK 39 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSCEEEEECS
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCCCEEEEeC
Confidence 46899999998766 345666778899999986
No 426
>2x4h_A Hypothetical protein SSO2273; transcription; 2.30A {Sulfolobus solfataricus}
Probab=27.04 E-value=41 Score=23.42 Aligned_cols=27 Identities=26% Similarity=0.199 Sum_probs=21.2
Q ss_pred HHHHHHhCCceeeeccCCCccccccCcccccc
Q 046950 56 LMRLLVHSGCFKKTKVNGEEEAYGLTAASTLL 87 (239)
Q Consensus 56 lLr~L~~~g~l~~~~~~~~~~~y~~t~~s~~l 87 (239)
.++.|...|++.+. ...|.+|+.+..+
T Consensus 51 ~l~~Le~~Gli~r~-----~~~~~Lt~~g~~~ 77 (139)
T 2x4h_A 51 EVSHLEEKGLVKKK-----EDGVWITNNGTRS 77 (139)
T ss_dssp HHHHHHHTTSEEEE-----TTEEEECHHHHHH
T ss_pred HHHHHHHCCCEEec-----CCeEEEChhHHHH
Confidence 78899999999987 3567888777644
No 427
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=27.01 E-value=72 Score=26.64 Aligned_cols=33 Identities=18% Similarity=0.180 Sum_probs=27.9
Q ss_pred CCcEEEecCcchHHHHHHHHHCCCCeEEEeehH
Q 046950 175 LGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp 207 (239)
...|+=||||.+-.+.++.-+...++++++|..
T Consensus 26 ~~dV~IVGaG~aGl~~A~~L~~~G~~v~v~E~~ 58 (398)
T 2xdo_A 26 DKNVAIIGGGPVGLTMAKLLQQNGIDVSVYERD 58 (398)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 457999999999988877777778999999973
No 428
>2htj_A P fimbrial regulatory protein KS71A; winged helix-turn-helix, PAP PILI, transcription activator; NMR {Escherichia coli} SCOP: a.4.5.73
Probab=26.96 E-value=77 Score=19.86 Aligned_cols=30 Identities=20% Similarity=0.392 Sum_probs=21.6
Q ss_pred ChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeee
Q 046950 39 GIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKT 69 (239)
Q Consensus 39 glfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~ 69 (239)
.|++.|... ++.|..| .|+.|...|++.+.
T Consensus 4 ~Il~~L~~~-~~~s~~eLa~~lgvs~~tv~r~L~~L~~~GlI~~~ 47 (81)
T 2htj_A 4 EILEFLNRH-NGGKTAEIAEALAVTDYQARYYLLLLEKAGMVQRS 47 (81)
T ss_dssp HHHHHHHHS-CCCCHHHHHHHHTSCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHHc-CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEe
Confidence 355666554 4667666 78889999999865
No 429
>3bro_A Transcriptional regulator; helix_TURN_helix, multiple antibiotic resistance protein (MA structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.04A {Oenococcus oeni} SCOP: a.4.5.28
Probab=26.96 E-value=49 Score=22.82 Aligned_cols=53 Identities=11% Similarity=0.167 Sum_probs=31.9
Q ss_pred HHhChhhHhhhCCC-CCCHHH--------------HHHHHHhCCceeeeccCC--CccccccCccccccc
Q 046950 36 IELGIADIIHSHGR-AITLSE--------------LMRLLVHSGCFKKTKVNG--EEEAYGLTAASTLLI 88 (239)
Q Consensus 36 ~~lglfd~L~~~~~-~~t~~e--------------lLr~L~~~g~l~~~~~~~--~~~~y~~t~~s~~l~ 88 (239)
.++.++..|...++ +++..+ +++.|...|++.+..... ..-.+.+|+.++.+.
T Consensus 35 ~~~~iL~~l~~~~~~~~~~~ela~~l~~~~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~i~lT~~G~~~~ 104 (141)
T 3bro_A 35 TQMTIIDYLSRNKNKEVLQRDLESEFSIKSSTATVLLQRMEIKKLLYRKVSGKDSRQKCLKLTKKANKLE 104 (141)
T ss_dssp HHHHHHHHHHHTTTSCCBHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECSSCTTSEEEEECHHHHTTH
T ss_pred HHHHHHHHHHHCCCCCcCHHHHHHHHCCCcchHHHHHHHHHHCCCEEeeCCCcCCCeeeeEECHHHHHHH
Confidence 34556667766432 677776 889999999999874200 011355666555333
No 430
>2gxg_A 146AA long hypothetical transcriptional regulator; winged helix; 1.45A {Sulfolobus tokodaii} PDB: 2eb7_A 2yr2_A 3gez_A 3gf2_A* 3gfi_A 3gfm_A 3gfj_A 3gfl_A
Probab=26.93 E-value=98 Score=21.30 Aligned_cols=52 Identities=8% Similarity=0.027 Sum_probs=32.8
Q ss_pred HHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccC-C-CccccccCccccccc
Q 046950 35 AIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVN-G-EEEAYGLTAASTLLI 88 (239)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~-~-~~~~y~~t~~s~~l~ 88 (239)
..++.++..|. . ++.+..+ +++-|...|++++.... + ..-.+.+|+.++.+.
T Consensus 37 ~~~~~iL~~l~-~-~~~~~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~d~r~~~~~lT~~G~~~~ 104 (146)
T 2gxg_A 37 YLDFLVLRATS-D-GPKTMAYLANRYFVTQSAITASVDKLEEMGLVVRVRDREDRRKILIEITEKGLETF 104 (146)
T ss_dssp HHHHHHHHHHT-T-SCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHh-c-CCcCHHHHHHHhCCCchhHHHHHHHHHHCCCEEeecCCCCCceEEEEECHHHHHHH
Confidence 34555677776 3 6788776 78999999999986420 0 011255666665433
No 431
>2a61_A Transcriptional regulator TM0710; APC4350, MCSG, midwest center for structural genomics, PSI, protein structure initiative, MARR; 1.80A {Thermotoga maritima} SCOP: a.4.5.28
Probab=26.50 E-value=32 Score=24.00 Aligned_cols=52 Identities=17% Similarity=0.129 Sum_probs=32.4
Q ss_pred HHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCC--CccccccCccccccc
Q 046950 36 IELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNG--EEEAYGLTAASTLLI 88 (239)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~--~~~~y~~t~~s~~l~ 88 (239)
.++.++..|... ++.+..+ +++-|...|++++..... ..-.+.+|+.++.+.
T Consensus 34 ~~~~iL~~l~~~-~~~~~~~la~~l~~s~~tvs~~l~~L~~~glv~r~~~~~d~r~~~~~lT~~G~~~~ 101 (145)
T 2a61_A 34 AQFDILQKIYFE-GPKRPGELSVLLGVAKSTVTGLVKRLEADGYLTRTPDPADRRAYFLVITRKGEEVI 101 (145)
T ss_dssp HHHHHHHHHHHH-CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEEETTEEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCCCchhHHHHHHHHHHCCCeeecCCCCCCceEEEEECHHHHHHH
Confidence 455566677654 5677766 889999999999874100 011356666665443
No 432
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=26.31 E-value=22 Score=29.43 Aligned_cols=13 Identities=31% Similarity=0.649 Sum_probs=10.2
Q ss_pred CCCcEEEecCcch
Q 046950 174 GLGSLVDVGGGNG 186 (239)
Q Consensus 174 ~~~~vvDVGGG~G 186 (239)
+...|+|||||+=
T Consensus 131 ~~~lviDIGGGSt 143 (315)
T 3mdq_A 131 HISLAMDIGGGSV 143 (315)
T ss_dssp CCEEEEEECSSCE
T ss_pred CCEEEEEeCCCce
Confidence 3468999999963
No 433
>3bja_A Transcriptional regulator, MARR family, putative; NP_978771.1, putative MARR-like transcription regulator, MAR structural genomics; 2.38A {Bacillus cereus}
Probab=26.16 E-value=35 Score=23.48 Aligned_cols=52 Identities=13% Similarity=0.259 Sum_probs=30.6
Q ss_pred HHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccC-C-CccccccCccccccc
Q 046950 36 IELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVN-G-EEEAYGLTAASTLLI 88 (239)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~-~-~~~~y~~t~~s~~l~ 88 (239)
.++.++..|... ++.+..+ +++-|...|++.+.... + ..-.+.+|+.++.+.
T Consensus 34 ~~~~iL~~l~~~-~~~~~~ela~~l~~~~~tvs~~l~~L~~~gli~r~~~~~d~r~~~~~lT~~G~~~~ 101 (139)
T 3bja_A 34 VQFGVIQVLAKS-GKVSMSKLIENMGCVPSNMTTMIQRMKRDGYVMTEKNPNDQRETLVYLTKKGEETK 101 (139)
T ss_dssp HHHHHHHHHHHS-CSEEHHHHHHHCSSCCTTHHHHHHHHHHTTSEEEEECSSCTTCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCcCHHHHHHHHCCChhHHHHHHHHHHHCCCeeeccCCCCCceeEEEECHHHHHHH
Confidence 344456666554 4555555 88999999999986410 0 111255666665443
No 434
>2fsw_A PG_0823 protein; alpha-beta structure, helix-turn-helix, winged-helix-turn-HE structural genomics, PSI, protein structure initiative; HET: MSE; 2.16A {Porphyromonas gingivalis} SCOP: a.4.5.69
Probab=26.13 E-value=90 Score=20.75 Aligned_cols=74 Identities=11% Similarity=0.057 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHhHHHHHHHHHHHHhC--hhhHhhhCCCCCCHHH---HHHHHHhCCceeeeccCC--CccccccCccccc
Q 046950 14 QGQAQLYKLMFNHLSSMSLKCAIELG--IADIIHSHGRAITLSE---LMRLLVHSGCFKKTKVNG--EEEAYGLTAASTL 86 (239)
Q Consensus 14 ~~~~~l~~~~~g~~~~~~L~~a~~lg--lfd~L~~~~~~~t~~e---lLr~L~~~g~l~~~~~~~--~~~~y~~t~~s~~ 86 (239)
-+...+++++.+.|...+|.... -| =+..|.+.-+.++... .|+.|...|++++..... ..-.|.+|+.++.
T Consensus 13 c~~~~~l~~l~~~~~~~IL~~L~-~~~~~~~eL~~~l~gis~~~ls~~L~~Le~~GlV~r~~~~~d~r~~~y~LT~~G~~ 91 (107)
T 2fsw_A 13 CPVRKSMQIFAGKWTLLIIFQIN-RRIIRYGELKRAIPGISEKMLIDELKFLCGKGLIKKKQYPEVPPRVEYSLTPLGEK 91 (107)
T ss_dssp CHHHHHHHHHTSSSHHHHHHHHT-TSCEEHHHHHHHSTTCCHHHHHHHHHHHHHTTSEEEEEECSSSCEEEEEECHHHHT
T ss_pred CCHHHHHHHHcCccHHHHHHHHH-hCCcCHHHHHHHcccCCHHHHHHHHHHHHHCCCEEEeecCCCCCeeEEEECccHHH
Confidence 46777888888888877776654 23 2455544211244433 899999999999875210 0124888888765
Q ss_pred cc
Q 046950 87 LI 88 (239)
Q Consensus 87 l~ 88 (239)
+.
T Consensus 92 l~ 93 (107)
T 2fsw_A 92 VL 93 (107)
T ss_dssp TH
T ss_pred HH
Confidence 44
No 435
>2fa5_A Transcriptional regulator MARR/EMRR family; multiple antibiotics resistance repressor, XCC structural genomics, X-RAY diffraction; 1.80A {Xanthomonas campestris}
Probab=26.09 E-value=42 Score=23.94 Aligned_cols=52 Identities=15% Similarity=0.188 Sum_probs=31.6
Q ss_pred HHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccC--CCccccccCccccccc
Q 046950 36 IELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVN--GEEEAYGLTAASTLLI 88 (239)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~--~~~~~y~~t~~s~~l~ 88 (239)
.++.++..|... ++.+..+ +++-|...|+|.+.... ...-.|.+|+.++.+.
T Consensus 50 ~~~~iL~~l~~~-~~~t~~ela~~l~is~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 117 (162)
T 2fa5_A 50 PEWRVITILALY-PGSSASEVSDRTAMDKVAVSRAVARLLERGFIRRETHGDDRRRSMLALSPAGRQVY 117 (162)
T ss_dssp HHHHHHHHHHHS-TTCCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC---------CCCEECHHHHHHH
T ss_pred HHHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEeeecCCCCCCeeEEEECHHHHHHH
Confidence 345577777664 5777766 78899999999986410 0112366666665443
No 436
>3u2r_A Regulatory protein MARR; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, helix-turn-helix; 2.20A {Planctomyces limnophilus}
Probab=26.00 E-value=73 Score=22.89 Aligned_cols=53 Identities=19% Similarity=0.213 Sum_probs=33.4
Q ss_pred HHHhChhhHhhhC-CCCCCHHH--------------HHHHHHhCCceeeeccCCCcc---ccccCccccccc
Q 046950 35 AIELGIADIIHSH-GRAITLSE--------------LMRLLVHSGCFKKTKVNGEEE---AYGLTAASTLLI 88 (239)
Q Consensus 35 a~~lglfd~L~~~-~~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~---~y~~t~~s~~l~ 88 (239)
..++.++..|... +++++..+ +++-|...|+|++..... +. .+.+|+.++.+.
T Consensus 46 ~~q~~vL~~l~~~~~~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~-DrR~~~l~LT~~G~~~~ 116 (168)
T 3u2r_A 46 AQQYNTLRLLRSVHPEGMATLQIADRLISRAPDITRLIDRLDDRGLVLRTRKPE-NRRVVEVALTDAGLKLL 116 (168)
T ss_dssp HHHHHHHHHHHHHTTSCEEHHHHHHHC---CTHHHHHHHHHHHTTSEEEEEETT-EEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCcCHHHHHHHHCCChhhHHHHHHHHHHCCCEeecCCCC-CCCeeEeEECHHHHHHH
Confidence 3455566677654 24677766 889999999999874200 11 366676666444
No 437
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=25.99 E-value=47 Score=27.22 Aligned_cols=31 Identities=19% Similarity=0.410 Sum_probs=24.3
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
..||-||||.+-+..++.-+...++++++|.
T Consensus 15 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~ 45 (360)
T 3ab1_A 15 RDLTIIGGGPTGIFAAFQCGMNNISCRIIES 45 (360)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECCCHHHHHHHHHHHhCCCCEEEEec
Confidence 4699999999888776655556788999886
No 438
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=25.98 E-value=48 Score=28.65 Aligned_cols=31 Identities=23% Similarity=0.414 Sum_probs=25.3
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
..|+=||||.+-+..+..-+.++.+++++|.
T Consensus 5 ~dVvIIGgG~aGl~aA~~l~~~g~~V~liE~ 35 (463)
T 2r9z_A 5 FDLIAIGGGSGGLAVAEKAAAFGKRVALIES 35 (463)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCcEEEEcC
Confidence 3589999999988776665557899999995
No 439
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=25.95 E-value=55 Score=20.78 Aligned_cols=45 Identities=18% Similarity=0.270 Sum_probs=29.2
Q ss_pred HHhChhhHhhhCC--CCCCHHH--------------HHHHHHhCCceeeeccCCCccccccCc
Q 046950 36 IELGIADIIHSHG--RAITLSE--------------LMRLLVHSGCFKKTKVNGEEEAYGLTA 82 (239)
Q Consensus 36 ~~lglfd~L~~~~--~~~t~~e--------------lLr~L~~~g~l~~~~~~~~~~~y~~t~ 82 (239)
.+..|+..|...+ .++|+.| .|+-|...|++...+. .++.|..++
T Consensus 15 ~~~~IL~~L~~~~~~~~~t~~eLA~~Lgvs~~tV~~~L~~L~~~G~I~~~g~--~~~~W~i~~ 75 (77)
T 1qgp_A 15 QEQRILKFLEELGEGKATTAHDLSGKLGTPKKEINRVLYSLAKKGKLQKEAG--TPPLWKIAV 75 (77)
T ss_dssp HHHHHHHHHHHHCSSSCEEHHHHHHHHCCCHHHHHHHHHHHHHHTSEEEECS--SSCEEEECC
T ss_pred HHHHHHHHHHHcCCCCCcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEecCC--CCCceEecC
Confidence 3456777776642 2667766 6788889999988642 245666543
No 440
>3k0l_A Repressor protein; helix-turn-helix, structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.35A {Acinetobacter SP}
Probab=25.90 E-value=47 Score=23.82 Aligned_cols=53 Identities=8% Similarity=0.114 Sum_probs=34.6
Q ss_pred HHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCC--CccccccCccccccc
Q 046950 35 AIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNG--EEEAYGLTAASTLLI 88 (239)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~--~~~~y~~t~~s~~l~ 88 (239)
..++.++..|... ++++..+ +++-|...|++++..... ..-.+.+|+.++.+.
T Consensus 46 ~~q~~iL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~DrR~~~l~LT~~G~~~~ 114 (162)
T 3k0l_A 46 LPQFTALSVLAAK-PNLSNAKLAERSFIKPQSANKILQDLLANGWIEKAPDPTHGRRILVTVTPSGLDKL 114 (162)
T ss_dssp HHHHHHHHHHHHC-TTCCHHHHHHHHTSCGGGHHHHHHHHHHTTSEEEEECCSSSCCEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCcCeEecCCCCcCCeeEeEECHhHHHHH
Confidence 3445577777765 5777777 889999999999875210 111366777666444
No 441
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=25.82 E-value=52 Score=26.32 Aligned_cols=29 Identities=10% Similarity=0.304 Sum_probs=22.4
Q ss_pred EEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 178 LVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 178 vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
|+=||||.+-+..++..+.-+.+++++|.
T Consensus 9 vvIIG~GpAGl~aA~~l~~~g~~V~liE~ 37 (312)
T 4gcm_A 9 IAIIGAGPAGMTAAVYASRANLKTVMIER 37 (312)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEec
Confidence 78899999887666554445788999985
No 442
>3bj6_A Transcriptional regulator, MARR family; helix-turn-helix, trasnscription regulator, STR genomics, PSI-2, protein structure initiative; 2.01A {Silicibacter pomeroyi dss-3}
Probab=25.77 E-value=1.4e+02 Score=20.61 Aligned_cols=34 Identities=9% Similarity=0.150 Sum_probs=25.2
Q ss_pred HHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeec
Q 046950 36 IELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTK 70 (239)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~ 70 (239)
.++.++..|... ++.+..+ +++-|...|++.+..
T Consensus 41 ~~~~iL~~l~~~-~~~t~~ela~~l~~~~~~vs~~l~~Le~~Glv~r~~ 88 (152)
T 3bj6_A 41 GQRAILEGLSLT-PGATAPQLGAALQMKRQYISRILQEVQRAGLIERRT 88 (152)
T ss_dssp HHHHHHHHHHHS-TTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC
T ss_pred HHHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCeeecC
Confidence 345567777664 4677766 889999999999874
No 443
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=25.69 E-value=48 Score=28.76 Aligned_cols=31 Identities=23% Similarity=0.336 Sum_probs=25.0
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
..|+=||||.+-+..+..-+..+.+++++|.
T Consensus 12 ~dVvVIGgG~aGl~aA~~l~~~g~~V~liE~ 42 (479)
T 2hqm_A 12 YDYLVIGGGSGGVASARRAASYGAKTLLVEA 42 (479)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTSCCEEEEES
T ss_pred CCEEEEcCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 4699999999988776655556899999995
No 444
>3boq_A Transcriptional regulator, MARR family; MARR famil structural genomics, PSI-2, protein structure initiative; 2.39A {Silicibacter pomeroyi dss-3}
Probab=25.68 E-value=1e+02 Score=21.66 Aligned_cols=53 Identities=13% Similarity=0.171 Sum_probs=31.5
Q ss_pred HHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccC-C-CccccccCccccccc
Q 046950 36 IELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVN-G-EEEAYGLTAASTLLI 88 (239)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~-~-~~~~y~~t~~s~~l~ 88 (239)
.++.++..|...+++.+..+ +++-|...|++++.... + ..-.+.+|+.++.+.
T Consensus 48 ~~~~iL~~L~~~~~~~~~~ela~~l~i~~~tvs~~l~~Le~~Gli~r~~~~~d~R~~~~~lT~~G~~~~ 116 (160)
T 3boq_A 48 AKFDAMAQLARNPDGLSMGKLSGALKVTNGNVSGLVNRLIKDGMVVKAMSADDRRSFSAKLTDAGLTTF 116 (160)
T ss_dssp HHHHHHHHHHHCTTCEEHHHHHHHCSSCCSCHHHHHHHHHHHTSEEEC--------CEEEECHHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCHHHHHHHHCCChhhHHHHHHHHHHCCCEEeecCCCCCCeEEEEEChhHHHHH
Confidence 35557777843235677766 88999999999986410 0 011256666665443
No 445
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=25.55 E-value=52 Score=26.49 Aligned_cols=31 Identities=16% Similarity=0.201 Sum_probs=23.4
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
..|+=||||.+-+..+..-+..+.+++++|.
T Consensus 6 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 36 (335)
T 2zbw_A 6 TDVLIVGAGPTGLFAGFYVGMRGLSFRFVDP 36 (335)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 4688999998887666544445788999986
No 446
>2nnn_A Probable transcriptional regulator; structural genomics, PSI-2, protein structure initiative, M center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=25.36 E-value=35 Score=23.53 Aligned_cols=52 Identities=8% Similarity=0.056 Sum_probs=33.0
Q ss_pred HHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCC--CccccccCccccccc
Q 046950 36 IELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNG--EEEAYGLTAASTLLI 88 (239)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~--~~~~y~~t~~s~~l~ 88 (239)
.++.++..|... ++.+..+ +++.|...|++++..... ..-.+.+|+.++.+.
T Consensus 39 ~~~~iL~~l~~~-~~~t~~ela~~l~~~~~tvs~~l~~L~~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 106 (140)
T 2nnn_A 39 TQWAALVRLGET-GPCPQNQLGRLTAMDAATIKGVVERLDKRGLIQRSADPDDGRRLLVSLSPAGRAEL 106 (140)
T ss_dssp HHHHHHHHHHHH-SSBCHHHHHHHTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEECHHHHHHH
T ss_pred HHHHHHHHHHHc-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCCCCCCeeeeEECHhHHHHH
Confidence 456677777654 4677766 889999999999864100 011366676665443
No 447
>3jw4_A Transcriptional regulator, MARR/EMRR family; DNA-binding protein, structural genomics, PSI-2, protein structure initiative; HET: MSE; 2.10A {Clostridium acetobutylicum} SCOP: a.4.5.0
Probab=25.35 E-value=89 Score=21.75 Aligned_cols=52 Identities=10% Similarity=0.155 Sum_probs=31.4
Q ss_pred HhChhhHhhhCC-CCCCHHH--------------HHHHHHhCCceeeeccC-C-CccccccCccccccc
Q 046950 37 ELGIADIIHSHG-RAITLSE--------------LMRLLVHSGCFKKTKVN-G-EEEAYGLTAASTLLI 88 (239)
Q Consensus 37 ~lglfd~L~~~~-~~~t~~e--------------lLr~L~~~g~l~~~~~~-~-~~~~y~~t~~s~~l~ 88 (239)
++.++..|...+ ++.+..+ +++-|...|++++.... + ..-.+.+|+.++.+.
T Consensus 43 q~~vL~~l~~~~~~~~t~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~DrR~~~~~LT~~G~~~~ 111 (148)
T 3jw4_A 43 QGRMIGYIYENQESGIIQKDLAQFFGRRGASITSMLQGLEKKGYIERRIPENNARQKNIYVLPKGAALV 111 (148)
T ss_dssp HHHHHHHHHHHTTTCCCHHHHHHC------CHHHHHHHHHHTTSBCCC--------CCCCBCHHHHHHH
T ss_pred HHHHHHHHHhCCCCCCCHHHHHHHHCCChhHHHHHHHHHHHCCCEEeeCCCCCchhheeeECHHHHHHH
Confidence 344666665532 4667666 88999999999987421 0 112466777776544
No 448
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=25.22 E-value=62 Score=27.04 Aligned_cols=33 Identities=15% Similarity=0.229 Sum_probs=26.7
Q ss_pred CCcEEEecCcchHHHHHHHHHCCCCeEEEeehH
Q 046950 175 LGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp 207 (239)
...|+=||||.+-.+.++.-+..+++++++|..
T Consensus 5 ~~~V~IVGaG~aGl~~A~~L~~~G~~v~v~E~~ 37 (397)
T 2vou_A 5 TDRIAVVGGSISGLTAALMLRDAGVDVDVYERS 37 (397)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCCCEEEEecC
Confidence 357999999998887776666668999999974
No 449
>3nrv_A Putative transcriptional regulator (MARR/EMRR FAM; PSI-2, protein structure initiati structural genomics; HET: MSE; 2.00A {Acinetobacter SP}
Probab=25.20 E-value=43 Score=23.41 Aligned_cols=53 Identities=15% Similarity=0.139 Sum_probs=31.9
Q ss_pred HHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccC-C-CccccccCccccccc
Q 046950 35 AIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVN-G-EEEAYGLTAASTLLI 88 (239)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~-~-~~~~y~~t~~s~~l~ 88 (239)
..++.++..|... ++.+..+ +++-|...|++++.... + ..-.+.+|+.++.+.
T Consensus 40 ~~~~~iL~~l~~~-~~~t~~ela~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~D~R~~~~~lT~~G~~~~ 108 (148)
T 3nrv_A 40 MTEWRIISVLSSA-SDCSVQKISDILGLDKAAVSRTVKKLEEKKYIEVNGHSEDKRTYAINLTEMGQELY 108 (148)
T ss_dssp HHHHHHHHHHHHS-SSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEC---------CCBEECHHHHHHH
T ss_pred HHHHHHHHHHHcC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeecCCCCcceeEeEECHhHHHHH
Confidence 3455567777665 4777765 88899999999987421 0 122466776666444
No 450
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=24.94 E-value=60 Score=26.66 Aligned_cols=39 Identities=13% Similarity=0.077 Sum_probs=29.0
Q ss_pred CCCcEEEecCcc-hHHHHHHHHHC-CCCeEEEeeh-HHHHhc
Q 046950 174 GLGSLVDVGGGN-GTFSRIISEAF-PGIKCTVLDL-PHAVAN 212 (239)
Q Consensus 174 ~~~~vvDVGGG~-G~~~~~l~~~~-P~l~~~~~Dl-p~vi~~ 212 (239)
...+|+-+|+|. |.++..+++.. |..++++.|. ++-.+.
T Consensus 170 ~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~ 211 (344)
T 2h6e_A 170 AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDF 211 (344)
T ss_dssp SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHH
Confidence 567899999754 88888888875 6789999986 444333
No 451
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=24.80 E-value=68 Score=20.52 Aligned_cols=29 Identities=10% Similarity=0.241 Sum_probs=22.7
Q ss_pred hhhHhhhCCCCCCHHH--------------HHHHHHhCCceeee
Q 046950 40 IADIIHSHGRAITLSE--------------LMRLLVHSGCFKKT 69 (239)
Q Consensus 40 lfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~ 69 (239)
|.+.|.+. +.++++| -|..|...|++.+.
T Consensus 7 Il~~L~~~-g~vsv~eLa~~l~VS~~TIRrdL~~Le~~G~l~R~ 49 (78)
T 1xn7_A 7 VRDLLALR-GRMEAAQISQTLNTPQPMINAMLQQLESMGKAVRI 49 (78)
T ss_dssp HHHHHHHS-CSBCHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEE
T ss_pred HHHHHHHc-CCCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEe
Confidence 55667665 5777777 67889999999988
No 452
>2pex_A Transcriptional regulator OHRR; transcription regulator; 1.90A {Xanthomonas campestris} PDB: 2pfb_A
Probab=24.69 E-value=40 Score=23.80 Aligned_cols=52 Identities=17% Similarity=0.224 Sum_probs=32.4
Q ss_pred HHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccC-C-CccccccCccccccc
Q 046950 36 IELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVN-G-EEEAYGLTAASTLLI 88 (239)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~-~-~~~~y~~t~~s~~l~ 88 (239)
.++.++..|... ++.+..+ +++-|...|++++.... + ..-.+.+|+.++.+.
T Consensus 48 ~~~~iL~~l~~~-~~~t~~ela~~l~~s~~tvs~~l~~Le~~glv~r~~~~~d~R~~~~~lT~~G~~~~ 115 (153)
T 2pex_A 48 PQYLVMLVLWET-DERSVSEIGERLYLDSATLTPLLKRLQAAGLVTRTRAASDERQVIIALTETGRALR 115 (153)
T ss_dssp HHHHHHHHHHHS-CSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC-------CEEEECHHHHHGG
T ss_pred HHHHHHHHHHhC-CCcCHHHHHHHhCCCcccHHHHHHHHHHCCCEeecCCcccCCeeEeeECHHHHHHH
Confidence 345566777664 5667666 78899999999986410 0 111366777666444
No 453
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=24.58 E-value=65 Score=26.92 Aligned_cols=32 Identities=13% Similarity=0.167 Sum_probs=26.4
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeehH
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp 207 (239)
..|+=||||.+-.+.++.-+-..++++++|..
T Consensus 6 ~dVvIIGgG~aGl~~A~~La~~G~~V~v~E~~ 37 (421)
T 3nix_A 6 VDVLVIGAGPAGTVAASLVNKSGFKVKIVEKQ 37 (421)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CcEEEECCCHHHHHHHHHHHhCCCCEEEEeCC
Confidence 36899999998887777666678899999974
No 454
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=24.50 E-value=1.5e+02 Score=23.94 Aligned_cols=62 Identities=19% Similarity=0.278 Sum_probs=36.8
Q ss_pred CCcEEEecCcchHHHHHHHHHC--CCCeEEEeehHH-----HHhcCCCCCCeEEEEccCCCCC-CCceEEE
Q 046950 175 LGSLVDVGGGNGTFSRIISEAF--PGIKCTVLDLPH-----AVANLPEADNLKYIAGDMFRFI-PPADAFL 237 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~--P~l~~~~~Dlp~-----vi~~a~~~~ri~~~~gD~f~~~-p~~D~~~ 237 (239)
.++||=.| |+|..+..++++. -..+++++++.. .++......+++++.+|+.++. ...|+++
T Consensus 27 ~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~d~vi 96 (343)
T 2b69_A 27 RKRILITG-GAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNVEHWIGHENFELINHDVVEPLYIEVDQIY 96 (343)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGTGGGTTCTTEEEEECCTTSCCCCCCSEEE
T ss_pred CCEEEEEc-CccHHHHHHHHHHHHCCCEEEEEeCCCccchhhhhhhccCCceEEEeCccCChhhcCCCEEE
Confidence 45677555 5566665555433 246788887631 1111112457999999998753 3477775
No 455
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=24.35 E-value=64 Score=28.23 Aligned_cols=32 Identities=25% Similarity=0.323 Sum_probs=27.0
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeehH
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp 207 (239)
..||=||||.+-.+.++.-+...++++++|..
T Consensus 8 ~dVvIVGgG~aGl~aA~~La~~G~~V~liE~~ 39 (512)
T 3e1t_A 8 FDLIVIGGGPGGSTLASFVAMRGHRVLLLERE 39 (512)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCCEEEEccC
Confidence 36999999998888877777778999999974
No 456
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=24.11 E-value=66 Score=26.13 Aligned_cols=31 Identities=16% Similarity=-0.024 Sum_probs=25.1
Q ss_pred cEEEecCcchHHHHHHHHHC---CCCeEEEeehH
Q 046950 177 SLVDVGGGNGTFSRIISEAF---PGIKCTVLDLP 207 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~---P~l~~~~~Dlp 207 (239)
.|+=||||..-.+.++.-+- ..++++++|..
T Consensus 3 dV~IIGaG~aGl~~A~~L~~~~~~G~~V~v~Ek~ 36 (342)
T 3qj4_A 3 QVLIVGAGMTGSLCAALLRRQTSGPLYLAVWDKA 36 (342)
T ss_dssp EEEEECCSHHHHHHHHHHHSCC-CCEEEEEECSS
T ss_pred cEEEECCcHHHHHHHHHHHhhccCCceEEEEECC
Confidence 58899999988877666655 78999999963
No 457
>3eyy_A Putative iron uptake regulatory protein; NUR, nickel-uptake regulator, D-domain, dimerization domain, DB-domain, DNA-binding domain; 2.40A {Streptomyces coelicolor}
Probab=24.02 E-value=34 Score=24.67 Aligned_cols=31 Identities=19% Similarity=0.295 Sum_probs=21.8
Q ss_pred hhhHhhhCCCCCCHHH---HHHHHHhCCceeeec
Q 046950 40 IADIIHSHGRAITLSE---LMRLLVHSGCFKKTK 70 (239)
Q Consensus 40 lfd~L~~~~~~~t~~e---lLr~L~~~g~l~~~~ 70 (239)
|++.|.+.+..++.+. .|+.|...|++.+..
T Consensus 39 i~~~l~~~~~~is~~TVYR~L~~L~e~Glv~~i~ 72 (145)
T 3eyy_A 39 ILGEVRKTASGINISTVYRTLELLEELGLVSHAH 72 (145)
T ss_dssp HHHHHHTTCTTCCHHHHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHhhCCCCCHhHHHHHHHHHHHCCcEEEEE
Confidence 4555554333456666 788999999999875
No 458
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=24.00 E-value=69 Score=26.96 Aligned_cols=33 Identities=15% Similarity=0.113 Sum_probs=26.5
Q ss_pred CCCcEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 174 GLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
...+||=||||.+.+..+..-..++.+++++|-
T Consensus 8 ~~~~~vIvGgG~AGl~aA~~L~~~~~~itlie~ 40 (385)
T 3klj_A 8 KSTKILILGAGPAGFSAAKAALGKCDDITMINS 40 (385)
T ss_dssp CBCSEEEECCSHHHHHHHHHHTTTCSCEEEECS
T ss_pred CCCCEEEEcCcHHHHHHHHHHhCCCCEEEEEEC
Confidence 456899999999887665555788999999976
No 459
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=23.93 E-value=54 Score=26.59 Aligned_cols=31 Identities=16% Similarity=0.131 Sum_probs=25.3
Q ss_pred cEEEecCcchHHHHHHHHHCCCCeEEEeehH
Q 046950 177 SLVDVGGGNGTFSRIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp 207 (239)
.|+=||||.+-.+.++.-+-...+++++|..
T Consensus 6 dvvIIG~G~~Gl~~A~~La~~G~~V~vlE~~ 36 (369)
T 3dme_A 6 DCIVIGAGVVGLAIARALAAGGHEVLVAEAA 36 (369)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSS
T ss_pred CEEEECCCHHHHHHHHHHHhCCCeEEEEeCC
Confidence 5899999988887766655578999999985
No 460
>4em8_A Ribose 5-phosphate isomerase B; ssgcid, seattle structural genomics center for infectious DI niaid; 1.95A {Anaplasma phagocytophilum}
Probab=23.78 E-value=44 Score=24.49 Aligned_cols=49 Identities=12% Similarity=0.049 Sum_probs=34.6
Q ss_pred EEEecCcchHHHHHHHHHCCCCeEEEeehHHHHhcCCC--CCCeEEEEccC
Q 046950 178 LVDVGGGNGTFSRIISEAFPGIKCTVLDLPHAVANLPE--ADNLKYIAGDM 226 (239)
Q Consensus 178 vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~vi~~a~~--~~ri~~~~gD~ 226 (239)
.-=+.||+|.-....+.++|.+|+.+.--|.....+++ ..+|-.+++-+
T Consensus 66 ~GIliCGTGiG~siaANKv~GIRAAl~~d~~sA~~ar~hNnANVL~lG~rv 116 (148)
T 4em8_A 66 FGVLICGTGIGMSIAANRHKNIRAALCSSTMLAKLSREHNDANVLCFGSRY 116 (148)
T ss_dssp EEEEEESSSHHHHHHHTTSTTCCEEECSSHHHHHHHHHHHCCCEEEEETTT
T ss_pred eEEEEccCcHHHHHHHhcCCCeEEEEeCCHHHHHHHHHhCCCcEEEEchhh
Confidence 44567899999999999999999877777766666554 33444444433
No 461
>3cdh_A Transcriptional regulator, MARR family; helix-turn-hleix, structura genomics, PSI-2, protein structure initiative; 2.69A {Silicibacter pomeroyi dss-3}
Probab=23.76 E-value=44 Score=23.61 Aligned_cols=52 Identities=12% Similarity=0.130 Sum_probs=33.3
Q ss_pred HHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccC--CCccccccCccccccc
Q 046950 36 IELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVN--GEEEAYGLTAASTLLI 88 (239)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~--~~~~~y~~t~~s~~l~ 88 (239)
.++.++..|... ++.+..+ +++.|...|++++.... ...-.+.+|+.++.+.
T Consensus 44 ~~~~iL~~l~~~-~~~t~~ela~~l~i~~~tvs~~l~~Le~~Glv~r~~~~~d~R~~~~~lT~~G~~~~ 111 (155)
T 3cdh_A 44 PEWRVLACLVDN-DAMMITRLAKLSLMEQSRMTRIVDQMDARGLVTRVADAKDKRRVRVRLTDDGRALA 111 (155)
T ss_dssp HHHHHHHHHSSC-SCBCHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECC------CCCEEECHHHHHHH
T ss_pred HHHHHHHHHHHC-CCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeccCCCcCCeeEeEECHHHHHHH
Confidence 345577777664 5777777 88999999999986410 0112366777666444
No 462
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=23.69 E-value=24 Score=29.21 Aligned_cols=13 Identities=38% Similarity=0.562 Sum_probs=10.3
Q ss_pred CCcEEEecCcchH
Q 046950 175 LGSLVDVGGGNGT 187 (239)
Q Consensus 175 ~~~vvDVGGG~G~ 187 (239)
...|+|||||+=.
T Consensus 139 ~~lvvDIGGGStE 151 (315)
T 1t6c_A 139 EVCVVDQGGGSTE 151 (315)
T ss_dssp EEEEEEEETTEEE
T ss_pred CEEEEEeCCCcEE
Confidence 4689999999643
No 463
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=23.63 E-value=77 Score=27.44 Aligned_cols=31 Identities=19% Similarity=0.184 Sum_probs=24.4
Q ss_pred CcEEEecCcchHHHH--HHHHHCCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTFSR--IISEAFPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~--~l~~~~P~l~~~~~Dl 206 (239)
..||=||||.+-+.. .+++..++.+++++|.
T Consensus 37 ~dvvIIG~G~aGl~aA~~l~~~~~g~~V~lie~ 69 (480)
T 3cgb_A 37 MNYVIIGGDAAGMSAAMQIVRNDENANVVTLEK 69 (480)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTCEEEEECS
T ss_pred ceEEEECCCHHHHHHHHHHHhhCcCCcEEEEEC
Confidence 479999999887644 5555668999999986
No 464
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=23.62 E-value=60 Score=25.71 Aligned_cols=31 Identities=19% Similarity=0.156 Sum_probs=24.0
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
..|+=||||.+-+..++.-+.-+.+++++|.
T Consensus 16 ~~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 46 (323)
T 3f8d_A 16 FDVIIVGLGPAAYGAALYSARYMLKTLVIGE 46 (323)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred cCEEEECccHHHHHHHHHHHHCCCcEEEEec
Confidence 4799999999988665554445788999986
No 465
>1r1t_A Transcriptional repressor SMTB; zinc, transcriptional regulation, winged HTH protein, DNA binding, transcription repressor; 1.70A {Synechococcus elongatus pcc 7942} SCOP: a.4.5.5 PDB: 1r23_A 1smt_A 1r22_A
Probab=23.55 E-value=65 Score=22.27 Aligned_cols=35 Identities=11% Similarity=0.144 Sum_probs=25.3
Q ss_pred HHHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeec
Q 046950 34 CAIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTK 70 (239)
Q Consensus 34 ~a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~ 70 (239)
--.++.|+..|.. ++.++.+ .|+.|...|++....
T Consensus 45 ~~~rl~IL~~L~~--~~~s~~ela~~lgis~stvs~~L~~Le~~Glv~~~~ 93 (122)
T 1r1t_A 45 DPNRLRLLSLLAR--SELCVGDLAQAIGVSESAVSHQLRSLRNLRLVSYRK 93 (122)
T ss_dssp CHHHHHHHHHHTT--CCBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHHHc--CCCCHHHHHHHHCcCHHHHHHHHHHHHHCCCeEEEE
Confidence 3345667777764 5677766 788899999998764
No 466
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=23.55 E-value=76 Score=25.43 Aligned_cols=33 Identities=15% Similarity=0.116 Sum_probs=26.7
Q ss_pred CCCcEEEecCcchHHHHHHHHH-------CCCCeEEEeeh
Q 046950 174 GLGSLVDVGGGNGTFSRIISEA-------FPGIKCTVLDL 206 (239)
Q Consensus 174 ~~~~vvDVGGG~G~~~~~l~~~-------~P~l~~~~~Dl 206 (239)
-+..||++|.-.|.-+..+++. .++-++.++|.
T Consensus 69 vpG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDT 108 (257)
T 3tos_A 69 VPGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDT 108 (257)
T ss_dssp SCSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEEC
T ss_pred CCCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEEC
Confidence 3568999999999988876552 57788999995
No 467
>2qww_A Transcriptional regulator, MARR family; YP_013417.1, multiple antibiotic-resistance repressor (MARR) structural genomics; HET: MSE; 2.07A {Listeria monocytogenes str}
Probab=23.53 E-value=1.9e+02 Score=20.03 Aligned_cols=52 Identities=17% Similarity=0.223 Sum_probs=32.7
Q ss_pred HHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceee--eccCC--CccccccCccccccc
Q 046950 36 IELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKK--TKVNG--EEEAYGLTAASTLLI 88 (239)
Q Consensus 36 ~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~--~~~~~--~~~~y~~t~~s~~l~ 88 (239)
.++.++..|... ++.|..+ +++-|...|++++ ..... ..-.+.+|+.++.+.
T Consensus 42 ~~~~iL~~l~~~-~~~t~~eLa~~l~~~~~tvs~~l~~Le~~Glv~r~~~~~~~d~R~~~~~LT~~G~~~~ 111 (154)
T 2qww_A 42 QQLAMINVIYST-PGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKLSKKGEDLS 111 (154)
T ss_dssp HHHHHHHHHHHS-TTEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEESCC--CTTCTTCEEEECHHHHHHH
T ss_pred HHHHHHHHHHHC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEecCcCCCCCCceeEeEECHHHHHHH
Confidence 455567777665 5677766 8899999999998 43100 111366777776444
No 468
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=23.52 E-value=61 Score=25.88 Aligned_cols=29 Identities=10% Similarity=0.134 Sum_probs=21.6
Q ss_pred EEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 178 LVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 178 vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
|+=||+|.+-+..++..+.-..+++++|-
T Consensus 9 VvIIGaGpAGlsAA~~lar~g~~v~lie~ 37 (304)
T 4fk1_A 9 CAVIGAGPAGLNASLVLGRARKQIALFDN 37 (304)
T ss_dssp EEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred EEEECCCHHHHHHHHHHHHCCCCEEEEeC
Confidence 78899998887666544334778888884
No 469
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=23.44 E-value=54 Score=19.88 Aligned_cols=33 Identities=21% Similarity=0.338 Sum_probs=22.5
Q ss_pred HhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeee
Q 046950 37 ELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKT 69 (239)
Q Consensus 37 ~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~ 69 (239)
+-.|++.|..+||-+.++. +||-|...|++.-.
T Consensus 12 e~~lL~yIr~sGGildI~~~a~kygV~kdeV~~~LrrLe~KGLI~le 58 (59)
T 2xvc_A 12 ERELLDYIVNNGGFLDIEHFSKVYGVEKQEVVKLLEALKNKGLIAVE 58 (59)
T ss_dssp HHHHHHHHHHTTSEEEHHHHHHHHCCCHHHHHHHHHHHHHTTSEEEE
T ss_pred HHHHHHHHHHcCCEEeHHHHHHHhCCCHHHHHHHHHHHHHCCCeecc
Confidence 3456777777665555544 78888999988753
No 470
>3cb2_A Gamma-1-tubulin, tubulin gamma-1 chain; lattice, microtubule, nucleation, GTPase, lateral interaction, structural protein, hydrolase; HET: GDP; 2.30A {Homo sapiens} PDB: 1z5v_A* 1z5w_A*
Probab=23.42 E-value=1.5e+02 Score=26.01 Aligned_cols=34 Identities=18% Similarity=0.331 Sum_probs=22.2
Q ss_pred HhhhhhhcCCCcEEEecCcchHH-----HHHHHHHCCCCe
Q 046950 166 SECKQIFEGLGSLVDVGGGNGTF-----SRIISEAFPGIK 200 (239)
Q Consensus 166 ~~~~~~~~~~~~vvDVGGG~G~~-----~~~l~~~~P~l~ 200 (239)
+.++ .+.+.-.+-.+|||+|.- +..+...||+.-
T Consensus 127 E~cD-~lqgf~i~~slGGGTGSG~~s~l~e~l~dey~~k~ 165 (475)
T 3cb2_A 127 DGSD-SLEGFVLCHSIAGGTGSGLGSYLLERLNDRYPKKL 165 (475)
T ss_dssp HTCS-SCCEEEEEEESSSSHHHHHHHHHHHHHHHHSTTSE
T ss_pred hcCC-CcceeEEeccCCCCCCcChHHHHHHHHHHHcCCCc
Confidence 4454 345667889999999743 334455688753
No 471
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=23.39 E-value=1.2e+02 Score=22.44 Aligned_cols=58 Identities=14% Similarity=0.243 Sum_probs=32.7
Q ss_pred cEEEecCcchHHHHHHHHHC--CCCeEEEeehH-HHHhcCCCCCCeEEEEccCCCCC----CCceEEE
Q 046950 177 SLVDVGGGNGTFSRIISEAF--PGIKCTVLDLP-HAVANLPEADNLKYIAGDMFRFI----PPADAFL 237 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~--P~l~~~~~Dlp-~vi~~a~~~~ri~~~~gD~f~~~----p~~D~~~ 237 (239)
+|+=.| |+|..+..++++. ...+++++++. +-.+... .+++++.+|+.++- ...|+++
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~~~~~~~~~d~vi 66 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDLTLSDLSDQNVVV 66 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGCCHHHHTTCSEEE
T ss_pred eEEEEc-CCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccChhhhhhcCCCEEE
Confidence 355455 4454444444432 24688888873 3333222 67899999997642 2356665
No 472
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=23.09 E-value=95 Score=23.24 Aligned_cols=51 Identities=10% Similarity=0.261 Sum_probs=30.5
Q ss_pred cEEEecCcchHHHHHHHHH---CCCCeEEEeehHH--HHhcCC-CCCCeEEEEccCCC
Q 046950 177 SLVDVGGGNGTFSRIISEA---FPGIKCTVLDLPH--AVANLP-EADNLKYIAGDMFR 228 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~---~P~l~~~~~Dlp~--vi~~a~-~~~ri~~~~gD~f~ 228 (239)
+++=.| |+|..+.+++++ ..+.+++++++.. .++... ...+++++.+|+.+
T Consensus 7 ~vlVtG-asg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d 63 (221)
T 3r6d_A 7 YITILG-AAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHERVTVIEGSFQN 63 (221)
T ss_dssp EEEEES-TTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTTEEEEECCTTC
T ss_pred EEEEEe-CCcHHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCceEEEECCCCC
Confidence 466666 344444444332 3567888888843 222211 35679999999976
No 473
>2h09_A Transcriptional regulator MNTR; transcription regulator, diphtheria toxin, manganese transport, structural genomics, NPPSFA; 2.10A {Escherichia coli}
Probab=23.09 E-value=62 Score=23.04 Aligned_cols=29 Identities=21% Similarity=0.161 Sum_probs=21.6
Q ss_pred HHHHHHhCCceeeeccCCCccccccCccccccc
Q 046950 56 LMRLLVHSGCFKKTKVNGEEEAYGLTAASTLLI 88 (239)
Q Consensus 56 lLr~L~~~g~l~~~~~~~~~~~y~~t~~s~~l~ 88 (239)
.++.|...|+|.+.. +..+.+|+.++.+.
T Consensus 74 ~l~~Le~~Glv~r~~----~~~~~lT~~g~~~~ 102 (155)
T 2h09_A 74 MLKRLATMGLIEMIP----WRGVFLTAEGEKLA 102 (155)
T ss_dssp HHHHHHHTTCEEEET----TTEEEECHHHHHHH
T ss_pred HHHHHHHCCCEEEec----CCceEEChhHHHHH
Confidence 788899999999875 35677777766443
No 474
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=22.96 E-value=76 Score=26.70 Aligned_cols=43 Identities=16% Similarity=0.122 Sum_probs=31.7
Q ss_pred hcCCCcEEEecCcc-hHHHHHHHHHCCCCeEEEeeh-HHHHhcCC
Q 046950 172 FEGLGSLVDVGGGN-GTFSRIISEAFPGIKCTVLDL-PHAVANLP 214 (239)
Q Consensus 172 ~~~~~~vvDVGGG~-G~~~~~l~~~~P~l~~~~~Dl-p~vi~~a~ 214 (239)
+....+|+-+|+|. |.++..+++..---++++.|. ++-.+.++
T Consensus 183 ~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~ 227 (398)
T 2dph_A 183 VKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLS 227 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH
Confidence 44567899999876 999999999874338999986 44444444
No 475
>1yyv_A Putative transcriptional regulator; reductive methylation, D lysine, structural genomics, PSI; HET: MLY; 2.35A {Salmonella typhimurium} SCOP: a.4.5.69
Probab=22.96 E-value=91 Score=21.86 Aligned_cols=75 Identities=11% Similarity=0.076 Sum_probs=47.0
Q ss_pred chHHHHHHHHHHhHHHHHHHHHHHHhC--hhhHhhhCCCCCCH---HHHHHHHHhCCceeeeccCC--CccccccCcccc
Q 046950 13 FQGQAQLYKLMFNHLSSMSLKCAIELG--IADIIHSHGRAITL---SELMRLLVHSGCFKKTKVNG--EEEAYGLTAAST 85 (239)
Q Consensus 13 ~~~~~~l~~~~~g~~~~~~L~~a~~lg--lfd~L~~~~~~~t~---~elLr~L~~~g~l~~~~~~~--~~~~y~~t~~s~ 85 (239)
.-+...+++++.+.|...+|.... -| =|..|.+.-..++. ...|+.|...|+|++..... ..-.|.+|+.++
T Consensus 22 ~c~~~~~l~~l~~~w~l~IL~~L~-~g~~~~~eLa~~l~gis~~tls~~L~~Le~~GlV~r~~~~~d~r~~~y~LT~~G~ 100 (131)
T 1yyv_A 22 QCPSREVLKHVTSRWGVLILVALR-DGTHRFSDLRRXMGGVSEXMLAQSLQALEQDGFLNRVSYPVVPPHVEYSLTPLGE 100 (131)
T ss_dssp TCTHHHHHHHHHSHHHHHHHHHGG-GCCEEHHHHHHHSTTCCHHHHHHHHHHHHHHTCEEEEEECSSSCEEEEEECHHHH
T ss_pred CCCHHHHHHHHcCCcHHHHHHHHH-cCCCCHHHHHHHhccCCHHHHHHHHHHHHHCCcEEEEecCCCCCeEEEEECccHH
Confidence 345677888888888877776654 33 34455442112333 33899999999999875210 112588888876
Q ss_pred ccc
Q 046950 86 LLI 88 (239)
Q Consensus 86 ~l~ 88 (239)
.+.
T Consensus 101 ~l~ 103 (131)
T 1yyv_A 101 QVS 103 (131)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 476
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=22.93 E-value=74 Score=27.33 Aligned_cols=32 Identities=13% Similarity=0.289 Sum_probs=25.1
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeehH
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp 207 (239)
..||=||||.+-+..+..-+..+.+++++|..
T Consensus 5 ~dvvIIGgG~aGl~aA~~l~~~g~~V~lie~~ 36 (467)
T 1zk7_A 5 VQVAVIGSGGAAMAAALKAVEQGAQVTLIERG 36 (467)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCEEEECCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 46999999999887665555557899999964
No 477
>1p6r_A Penicillinase repressor; transcription regulation, DNA-binding, winged helix protein, bacterial resistance to antibiotics; NMR {Bacillus licheniformis} SCOP: a.4.5.39 PDB: 2p7c_B
Probab=22.82 E-value=56 Score=20.50 Aligned_cols=19 Identities=21% Similarity=0.489 Sum_probs=15.4
Q ss_pred CHHHHHHHHHhCCceeeec
Q 046950 52 TLSELMRLLVHSGCFKKTK 70 (239)
Q Consensus 52 t~~elLr~L~~~g~l~~~~ 70 (239)
|+..+|+.|...|++.+..
T Consensus 43 Tv~~~l~rL~~kGlv~r~~ 61 (82)
T 1p6r_A 43 TIQTMLLRLIKKGALNHHK 61 (82)
T ss_dssp HHHHHHHHHHHTTSEEEEE
T ss_pred HHHHHHHHHHHCCCeEEEe
Confidence 3444899999999999875
No 478
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=22.80 E-value=47 Score=28.99 Aligned_cols=29 Identities=28% Similarity=0.391 Sum_probs=24.0
Q ss_pred cEEEecCcchHHHHHHHHHC-CCCeEEEee
Q 046950 177 SLVDVGGGNGTFSRIISEAF-PGIKCTVLD 205 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~-P~l~~~~~D 205 (239)
.|+=||||.|-+..++.-+- ...+++++|
T Consensus 5 dvvVIGgG~aGl~aA~~la~~~G~~V~liE 34 (490)
T 1fec_A 5 DLVVIGAGSGGLEAGWNAASLHKKRVAVID 34 (490)
T ss_dssp EEEEECCSHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cEEEECCCHHHHHHHHHHHHHcCCEEEEEe
Confidence 58999999999877665555 688999999
No 479
>1z7u_A Hypothetical protein EF0647; winged-helix-turn-helix, MARR, structural genomics, PSI, Pro structure initiative; 2.20A {Enterococcus faecalis} SCOP: a.4.5.69
Probab=22.80 E-value=46 Score=22.54 Aligned_cols=73 Identities=12% Similarity=0.073 Sum_probs=42.8
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHhC-hhhHhhhCCC-CCCH---HHHHHHHHhCCceeeeccCC--CccccccCcccccc
Q 046950 15 GQAQLYKLMFNHLSSMSLKCAIELG-IADIIHSHGR-AITL---SELMRLLVHSGCFKKTKVNG--EEEAYGLTAASTLL 87 (239)
Q Consensus 15 ~~~~l~~~~~g~~~~~~L~~a~~lg-lfd~L~~~~~-~~t~---~elLr~L~~~g~l~~~~~~~--~~~~y~~t~~s~~l 87 (239)
+...+++++.+.|...+|....+-+ =+..|++. - .++. ...|+-|...|++++..... ..-.|.+|+.++.+
T Consensus 11 ~~~~~l~~l~~~~~~~IL~~L~~~~~~~~eLa~~-l~~is~~tvs~~L~~Le~~GlI~r~~~~~d~r~~~~~LT~~G~~~ 89 (112)
T 1z7u_A 11 SINLALSTINGKWKLSLMDELFQGTKRNGELMRA-LDGITQRVLTDRLREMEKDGLVHRESFNELPPRVEYTLTPEGYAL 89 (112)
T ss_dssp HHHHHHHTTCSTTHHHHHHHHHHSCBCHHHHHHH-STTCCHHHHHHHHHHHHHHTSEEEEEECCSSCEEEEEECHHHHHH
T ss_pred CHHHHHHHHcCccHHHHHHHHHhCCCCHHHHHHH-hccCCHHHHHHHHHHHHHCCCEEEeecCCCCCeEEEEECHhHHHH
Confidence 4566677777777776666554411 23344432 2 3333 33899999999999875210 11138888877644
Q ss_pred c
Q 046950 88 I 88 (239)
Q Consensus 88 ~ 88 (239)
.
T Consensus 90 ~ 90 (112)
T 1z7u_A 90 Y 90 (112)
T ss_dssp H
T ss_pred H
Confidence 3
No 480
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=22.72 E-value=65 Score=25.17 Aligned_cols=30 Identities=13% Similarity=0.216 Sum_probs=22.4
Q ss_pred cEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 177 SLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
.|+=||||.+-+..+..-+.-..+++++|.
T Consensus 4 ~vvIIG~G~aGl~aA~~l~~~g~~v~lie~ 33 (297)
T 3fbs_A 4 DVIIIGGSYAGLSAALQLGRARKNILLVDA 33 (297)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEECCCHHHHHHHHHHHhCCCCEEEEeC
Confidence 588999999887665544444678999994
No 481
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=22.65 E-value=72 Score=26.80 Aligned_cols=31 Identities=13% Similarity=0.209 Sum_probs=24.2
Q ss_pred CcEEEecCcchHH--HHHHHHHCCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTF--SRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~--~~~l~~~~P~l~~~~~Dl 206 (239)
++||=||||.+.. +..|++..++.+++++|-
T Consensus 2 k~vvIIGaG~aGl~aA~~L~~~g~~~~V~lie~ 34 (404)
T 3fg2_P 2 DTVLIAGAGHAGFQVAVSLRQAKYPGRIALIND 34 (404)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTCCSCEEEECC
T ss_pred CCEEEEcChHHHHHHHHHHHhhCcCCCEEEEeC
Confidence 4789999998766 446677777778999887
No 482
>3deu_A Transcriptional regulator SLYA; MARR, WING-helix, transcription regulator, activator, DNA-binding, repressor; HET: SAL; 2.30A {Salmonella typhimurium} SCOP: a.4.5.28
Probab=22.44 E-value=48 Score=24.07 Aligned_cols=54 Identities=15% Similarity=0.114 Sum_probs=32.3
Q ss_pred HHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCC--CccccccCccccccc
Q 046950 35 AIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNG--EEEAYGLTAASTLLI 88 (239)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~--~~~~y~~t~~s~~l~ 88 (239)
..++.++..|...+++++..+ +++-|...|+|++..... ..-.+.+|+.++.+.
T Consensus 53 ~~q~~vL~~L~~~~~~~t~~eLa~~l~i~~~tvs~~l~~Le~~GlV~r~~~~~DrR~~~l~LT~~G~~~~ 122 (166)
T 3deu_A 53 QTHWVTLHNIHQLPPDQSQIQLAKAIGIEQPSLVRTLDQLEDKGLISRQTCASDRRAKRIKLTEKAEPLI 122 (166)
T ss_dssp HHHHHHHHHHHHSCSSEEHHHHHHHHTSCHHHHHHHHHHHHHTTSEEEC--------CEEEECGGGHHHH
T ss_pred HHHHHHHHHHHHcCCCCCHHHHHHHHCCCHhhHHHHHHHHHHCCCEEeeCCCCCCCeeEEEECHHHHHHH
Confidence 345556677765335677766 788999999999874210 112356666666444
No 483
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=22.42 E-value=55 Score=28.25 Aligned_cols=33 Identities=21% Similarity=0.287 Sum_probs=24.5
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeehHH
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPH 208 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~ 208 (239)
++||=||+|.+-++.+..-+.-..+++|++-..
T Consensus 2 k~VvVIGaG~~GL~aA~~La~~G~~V~VlEa~~ 34 (501)
T 4dgk_A 2 KPTTVIGAGFGGLALAIRLQAAGIPVLLLEQRD 34 (501)
T ss_dssp CCEEEECCHHHHHHHHHHHHHTTCCEEEECCC-
T ss_pred CCEEEECCcHHHHHHHHHHHHCCCcEEEEccCC
Confidence 579999999999876654444577899988733
No 484
>1jgs_A Multiple antibiotic resistance protein MARR; transcription regulation, DNA-binding, repressor, transcription; HET: SAL; 2.30A {Escherichia coli} SCOP: a.4.5.28
Probab=22.19 E-value=52 Score=22.61 Aligned_cols=51 Identities=18% Similarity=0.184 Sum_probs=30.9
Q ss_pred HhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccCC--CccccccCccccccc
Q 046950 37 ELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVNG--EEEAYGLTAASTLLI 88 (239)
Q Consensus 37 ~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~~--~~~~y~~t~~s~~l~ 88 (239)
++.++..|... ++.+..+ +++-|...|++++..... ..-.+.+|+.++.+.
T Consensus 36 ~~~iL~~l~~~-~~~~~~~la~~l~~~~~tvs~~l~~L~~~gli~r~~~~~d~R~~~~~lT~~G~~~~ 102 (138)
T 1jgs_A 36 QFKVLCSIRCA-ACITPVELKKVLSVDLGALTRMLDRLVCKGWVERLPNPNDKRGVLVKLTTGGAAIC 102 (138)
T ss_dssp HHHHHHHHHHH-SSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEECTTCSSCEEEEECHHHHHHH
T ss_pred HHHHHHHHHhc-CCCCHHHHHHHHCCChHHHHHHHHHHHHCCCEEecCCcccCceeEeEEChhHHHHH
Confidence 44455566553 4566655 889999999999864200 111266777666444
No 485
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=22.10 E-value=63 Score=28.22 Aligned_cols=30 Identities=23% Similarity=0.428 Sum_probs=24.1
Q ss_pred cEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 177 SLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
.||=||||.+-+..+..-+..+.+++++|.
T Consensus 4 dVvIIGgG~aGl~aA~~l~~~g~~V~liE~ 33 (500)
T 1onf_A 4 DLIVIGGGSGGMAAARRAARHNAKVALVEK 33 (500)
T ss_dssp SEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHHCCCcEEEEeC
Confidence 588999999988766655556889999995
No 486
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=22.10 E-value=88 Score=26.21 Aligned_cols=32 Identities=25% Similarity=0.452 Sum_probs=24.5
Q ss_pred CcEEEecCcchHHHH--HHHHHCCCCeEEEeehH
Q 046950 176 GSLVDVGGGNGTFSR--IISEAFPGIKCTVLDLP 207 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~--~l~~~~P~l~~~~~Dlp 207 (239)
..|+=||||.+-... .++++.|.++++++|..
T Consensus 80 ~DVvIVGgG~AGL~aA~~La~~~~G~~V~LiEk~ 113 (344)
T 3jsk_A 80 TDIVIVGAGSCGLSAAYVLSTLRPDLRITIVEAG 113 (344)
T ss_dssp CSEEEECCSHHHHHHHHHHHHHCTTSCEEEEESS
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence 358999999887644 45555689999999974
No 487
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=22.03 E-value=48 Score=27.58 Aligned_cols=32 Identities=16% Similarity=0.132 Sum_probs=24.9
Q ss_pred cEEEecCcchHHHHHHHHHCCCCeEEEeehHH
Q 046950 177 SLVDVGGGNGTFSRIISEAFPGIKCTVLDLPH 208 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~ 208 (239)
.|+-||||.+-.+.++.-+...++++++|..+
T Consensus 4 dV~IvGaG~aGl~~A~~L~~~G~~v~v~E~~~ 35 (394)
T 1k0i_A 4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQT 35 (394)
T ss_dssp SEEEECCSHHHHHHHHHHHHHTCCEEEECSSC
T ss_pred cEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 58999999988866655555588999999743
No 488
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=22.02 E-value=64 Score=27.63 Aligned_cols=32 Identities=22% Similarity=0.241 Sum_probs=27.4
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeehH
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp 207 (239)
..|+-||||.+-.+.++.-+-..++++++|..
T Consensus 7 ~dVvIVGaG~aGl~aA~~La~~G~~V~vlE~~ 38 (453)
T 3atr_A 7 YDVLIIGGGFAGSSAAYQLSRRGLKILLVDSK 38 (453)
T ss_dssp CSEEEECCSHHHHHHHHHHSSSSCCEEEECSS
T ss_pred CCEEEECcCHHHHHHHHHHHHCCCCEEEEECC
Confidence 36899999999888888877788999999974
No 489
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=21.95 E-value=68 Score=25.64 Aligned_cols=31 Identities=32% Similarity=0.426 Sum_probs=23.2
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
..|+=||||.+-...++.-+....+++++|.
T Consensus 17 ~dvvIIG~G~aGl~aA~~l~~~g~~v~lie~ 47 (319)
T 3cty_A 17 FDVVIVGAGAAGFSAAVYAARSGFSVAILDK 47 (319)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEEES
T ss_pred CcEEEECcCHHHHHHHHHHHhCCCcEEEEeC
Confidence 4699999998877665554444678999986
No 490
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=21.80 E-value=70 Score=23.92 Aligned_cols=58 Identities=12% Similarity=0.161 Sum_probs=33.1
Q ss_pred EEEecCcchHHHHHHHHHC--CCCeEEEeehHH-HHhcCCCCCCeEEEEccCCCC----CCCceEEE
Q 046950 178 LVDVGGGNGTFSRIISEAF--PGIKCTVLDLPH-AVANLPEADNLKYIAGDMFRF----IPPADAFL 237 (239)
Q Consensus 178 vvDVGGG~G~~~~~l~~~~--P~l~~~~~Dlp~-vi~~a~~~~ri~~~~gD~f~~----~p~~D~~~ 237 (239)
|+=.| |+|..+..++++. -+.+++++++.. -.+... ..+++++.+|+.++ +...|+++
T Consensus 3 ilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~~d~~~~~~~~~d~vi 67 (224)
T 3h2s_A 3 IAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-GATVATLVKEPLVLTEADLDSVDAVV 67 (224)
T ss_dssp EEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-CTTSEEEECCGGGCCHHHHTTCSEEE
T ss_pred EEEEc-CCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-CCCceEEecccccccHhhcccCCEEE
Confidence 44444 4555555444432 256788888733 333221 45799999999764 22356655
No 491
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=21.79 E-value=98 Score=28.19 Aligned_cols=32 Identities=28% Similarity=0.349 Sum_probs=26.7
Q ss_pred CCcEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 175 LGSLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 175 ~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
..+||=||||.+.+..+..-+-...+++++|-
T Consensus 373 ~~~vvIIGgG~AGl~aA~~l~~~g~~V~lie~ 404 (671)
T 1ps9_A 373 KKNLAVVGAGPAGLAFAINAAARGHQVTLFDA 404 (671)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTCEEEEEES
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCCeEEEEeC
Confidence 35899999999988777766667889999986
No 492
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=21.67 E-value=84 Score=27.34 Aligned_cols=30 Identities=10% Similarity=0.108 Sum_probs=25.4
Q ss_pred cEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 177 SLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
.|+=||||.|-+..+...+--..+++++|.
T Consensus 10 DvvVIGgG~aGl~aA~~la~~G~~V~liE~ 39 (492)
T 3ic9_A 10 DVAIIGTGTAGMGAYRAAKKHTDKVVLIEG 39 (492)
T ss_dssp EEEEECCSHHHHHHHHHHHTTCSCEEEEES
T ss_pred CEEEECCCHHHHHHHHHHHhCCCcEEEEeC
Confidence 588899999998877776667889999996
No 493
>3oop_A LIN2960 protein; protein structure initiative, PSI-2, structural genomics, MI center for structural genomics, MCSG, unknown function; 1.78A {Listeria innocua}
Probab=21.66 E-value=36 Score=23.74 Aligned_cols=53 Identities=11% Similarity=0.129 Sum_probs=32.2
Q ss_pred HHHhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccC--CCccccccCccccccc
Q 046950 35 AIELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVN--GEEEAYGLTAASTLLI 88 (239)
Q Consensus 35 a~~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~--~~~~~y~~t~~s~~l~ 88 (239)
..++.++..|... ++.|..+ +++-|...|++++.... ...-.+.+|+.++.+.
T Consensus 37 ~~~~~iL~~l~~~-~~~t~~eLa~~l~~~~~~vs~~l~~L~~~Glv~r~~~~~D~R~~~~~LT~~G~~~~ 105 (143)
T 3oop_A 37 PEQWSVLEGIEAN-EPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTDKGRKET 105 (143)
T ss_dssp HHHHHHHHHHHHH-SSEEHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEEC----CCSCEEEECHHHHHHH
T ss_pred HHHHHHHHHHHHc-CCcCHHHHHHHHCCCHhhHHHHHHHHHHCCCeeccCCCccCceeeeeECHHHHHHH
Confidence 3445566666554 4666665 88899999999986421 0112356676666444
No 494
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=21.61 E-value=65 Score=21.20 Aligned_cols=30 Identities=7% Similarity=0.214 Sum_probs=22.4
Q ss_pred hhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeec
Q 046950 40 IADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTK 70 (239)
Q Consensus 40 lfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~ 70 (239)
|.+.|.+. +.++++| .|..|...|++.+..
T Consensus 7 Il~~L~~~-g~vsv~eLA~~l~VS~~TIRrDL~~Le~~G~l~R~~ 50 (87)
T 2k02_A 7 VRDMLALQ-GRMEAKQLSARLQTPQPLIDAMLERMEAMGKVVRIS 50 (87)
T ss_dssp HHHHHHHS-CSEEHHHHHHHTTCCHHHHHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHHc-CCCcHHHHHHHHCcCHHHHHHHHHHHHHCCCEEEEe
Confidence 45666664 5677766 688899999999883
No 495
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=21.59 E-value=63 Score=26.89 Aligned_cols=31 Identities=16% Similarity=0.064 Sum_probs=23.8
Q ss_pred CcEEEecCcchHHHHHHHHHCCCCeEEEeeh
Q 046950 176 GSLVDVGGGNGTFSRIISEAFPGIKCTVLDL 206 (239)
Q Consensus 176 ~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dl 206 (239)
..|+-||||.+-.+.++.-+.-.++++++|.
T Consensus 7 ~dVvIVGaG~aGl~~A~~L~~~G~~V~viE~ 37 (399)
T 2x3n_A 7 IDVLINGCGIGGAMLAYLLGRQGHRVVVVEQ 37 (399)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCCEEEECS
T ss_pred CCEEEECcCHHHHHHHHHHHhCCCcEEEEeC
Confidence 3689999998777665555445889999997
No 496
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=21.52 E-value=90 Score=25.88 Aligned_cols=35 Identities=14% Similarity=0.134 Sum_probs=28.8
Q ss_pred hcCCCcEEEec--CcchHHHHHHHHHCCCCeEEEeehH
Q 046950 172 FEGLGSLVDVG--GGNGTFSRIISEAFPGIKCTVLDLP 207 (239)
Q Consensus 172 ~~~~~~vvDVG--GG~G~~~~~l~~~~P~l~~~~~Dlp 207 (239)
.....+|+-+| ||.|..+..+++.. ..++++.+..
T Consensus 161 ~~~g~~VlV~Ga~G~iG~~~~q~a~~~-Ga~Vi~~~~~ 197 (362)
T 2c0c_A 161 LSEGKKVLVTAAAGGTGQFAMQLSKKA-KCHVIGTCSS 197 (362)
T ss_dssp CCTTCEEEETTTTBTTHHHHHHHHHHT-TCEEEEEESS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHhC-CCEEEEEECC
Confidence 44567899999 88999999999987 5588888873
No 497
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=21.49 E-value=64 Score=26.59 Aligned_cols=32 Identities=25% Similarity=0.333 Sum_probs=24.0
Q ss_pred cEEEecCcchHHHHHHHHHCCCCeEEEeehHH
Q 046950 177 SLVDVGGGNGTFSRIISEAFPGIKCTVLDLPH 208 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~ 208 (239)
.|+=||||.+-.+.++.-+...++++++|..+
T Consensus 6 dVvIvG~G~aGl~~A~~La~~G~~V~l~E~~~ 37 (397)
T 3cgv_A 6 DVLVVGGGPGGSTAARYAAKYGLKTLMIEKRP 37 (397)
T ss_dssp EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 58889999977666555444578999999844
No 498
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=21.42 E-value=1.3e+02 Score=24.67 Aligned_cols=34 Identities=18% Similarity=0.255 Sum_probs=29.4
Q ss_pred cCCCcEEEecCcchHHHHHHHHHCCCCeEEEeehHH
Q 046950 173 EGLGSLVDVGGGNGTFSRIISEAFPGIKCTVLDLPH 208 (239)
Q Consensus 173 ~~~~~vvDVGGG~G~~~~~l~~~~P~l~~~~~Dlp~ 208 (239)
.....|||-=||+|+.+.+..+. +-+++++|+++
T Consensus 241 ~~~~~vlDpF~GsGtt~~aa~~~--~r~~ig~e~~~ 274 (319)
T 1eg2_A 241 HPGSTVLDFFAGSGVTARVAIQE--GRNSICTDAAP 274 (319)
T ss_dssp CTTCEEEETTCTTCHHHHHHHHH--TCEEEEEESST
T ss_pred CCCCEEEecCCCCCHHHHHHHHc--CCcEEEEECCc
Confidence 34578999999999999999988 57899999964
No 499
>3e6m_A MARR family transcriptional regulator; APC88769, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; 2.20A {Silicibacter pomeroyi}
Probab=21.41 E-value=1.3e+02 Score=21.18 Aligned_cols=51 Identities=14% Similarity=0.193 Sum_probs=31.5
Q ss_pred HhChhhHhhhCCCCCCHHH--------------HHHHHHhCCceeeeccC-C-CccccccCccccccc
Q 046950 37 ELGIADIIHSHGRAITLSE--------------LMRLLVHSGCFKKTKVN-G-EEEAYGLTAASTLLI 88 (239)
Q Consensus 37 ~lglfd~L~~~~~~~t~~e--------------lLr~L~~~g~l~~~~~~-~-~~~~y~~t~~s~~l~ 88 (239)
++.++..|... ++++..+ +++-|...|++++.... + ..-.+.+|+.++.+.
T Consensus 55 q~~vL~~l~~~-~~~t~~eLa~~l~~~~~~vs~~l~~Le~~Glv~r~~~~~DrR~~~~~LT~~G~~~~ 121 (161)
T 3e6m_A 55 KLRLLSSLSAY-GELTVGQLATLGVMEQSTTSRTVDQLVDEGLAARSISDADQRKRTVVLTRKGKKKL 121 (161)
T ss_dssp HHHHHHHHHHH-SEEEHHHHHHHTTCCHHHHHHHHHHHHHTTSEEECC---CCCSCEEEECHHHHHHH
T ss_pred HHHHHHHHHhC-CCCCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEeeCCcccCCeeEeeECHHHHHHH
Confidence 44466666654 4666665 88999999999987421 0 112366676666444
No 500
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=21.35 E-value=95 Score=24.64 Aligned_cols=31 Identities=19% Similarity=0.412 Sum_probs=24.1
Q ss_pred cEEEecCcchHHHHHHHHHC-CCCeEEEeehH
Q 046950 177 SLVDVGGGNGTFSRIISEAF-PGIKCTVLDLP 207 (239)
Q Consensus 177 ~vvDVGGG~G~~~~~l~~~~-P~l~~~~~Dlp 207 (239)
.||=||||..-...++.-+. |+++++++|..
T Consensus 41 dVvIIGgG~aGl~aA~~la~~~G~~V~viEk~ 72 (284)
T 1rp0_A 41 DVVVVGAGSAGLSAAYEISKNPNVQVAIIEQS 72 (284)
T ss_dssp EEEEECCSHHHHHHHHHHHTSTTSCEEEEESS
T ss_pred CEEEECccHHHHHHHHHHHHcCCCeEEEEECC
Confidence 58999999877766555544 69999999974
Done!