Query 046958
Match_columns 417
No_of_seqs 192 out of 1827
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 10:32:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/046958.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/046958hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hz6_A Xylulokinase; xylulose, 100.0 1.2E-74 4E-79 601.9 32.3 376 17-413 88-503 (511)
2 3h3n_X Glycerol kinase; ATP-bi 100.0 1.6E-74 5.5E-79 600.3 33.1 381 17-413 89-498 (506)
3 3g25_A Glycerol kinase; IDP007 100.0 1.2E-74 3.9E-79 600.9 31.0 382 17-414 90-500 (501)
4 3ifr_A Carbohydrate kinase, FG 100.0 8.7E-75 3E-79 602.4 29.9 374 17-413 91-496 (508)
5 3ll3_A Gluconate kinase; xylul 100.0 1.7E-74 5.9E-79 599.6 31.6 373 17-412 85-488 (504)
6 2p3r_A Glycerol kinase; glycer 100.0 1.2E-74 4E-79 601.7 30.2 382 17-415 87-498 (510)
7 4e1j_A Glycerol kinase; struct 100.0 2.1E-74 7E-79 601.0 29.4 377 17-411 110-518 (520)
8 3ezw_A Glycerol kinase; glycer 100.0 3.3E-74 1.1E-78 600.6 29.8 384 17-416 88-500 (526)
9 2w40_A Glycerol kinase, putati 100.0 2.8E-72 9.7E-77 583.3 31.2 378 17-412 90-502 (503)
10 2d4w_A Glycerol kinase; alpha 100.0 3.1E-72 1E-76 583.1 30.1 382 17-416 86-501 (504)
11 2dpn_A Glycerol kinase; thermu 100.0 8.3E-72 2.8E-76 578.7 30.8 380 17-415 86-494 (495)
12 2zf5_O Glycerol kinase; hypert 100.0 1.7E-71 5.8E-76 576.7 28.3 376 17-414 87-489 (497)
13 2itm_A Xylulose kinase, xylulo 100.0 3.3E-71 1.1E-75 572.8 29.3 373 17-412 82-482 (484)
14 3jvp_A Ribulokinase; PSI-II, N 100.0 4.8E-70 1.6E-74 574.4 30.4 373 17-410 101-539 (572)
15 3l0q_A Xylulose kinase; xlylul 100.0 1.7E-69 5.7E-74 568.4 28.5 374 18-414 89-541 (554)
16 4bc3_A Xylulose kinase; transf 100.0 1.3E-68 4.4E-73 559.7 28.0 366 22-415 130-535 (538)
17 3i8b_A Xylulose kinase; strain 100.0 4.7E-67 1.6E-71 544.6 27.3 364 17-401 79-504 (515)
18 2uyt_A Rhamnulokinase; rhamnos 100.0 3.1E-62 1.1E-66 506.3 19.7 365 17-407 88-486 (489)
19 3h6e_A Carbohydrate kinase, FG 100.0 1.8E-59 6.3E-64 483.1 19.2 313 17-364 83-436 (482)
20 1hux_A Activator of (R)-2-hydr 99.2 2E-12 6.7E-17 123.1 3.4 116 224-364 140-257 (270)
21 4ehu_A Activator of 2-hydroxyi 98.0 1.5E-05 5.2E-10 75.2 9.0 77 276-365 179-256 (276)
22 2ews_A Pantothenate kinase; PA 97.9 6.8E-05 2.3E-09 71.3 12.0 122 230-361 155-286 (287)
23 2i7n_A Pantothenate kinase 1; 97.9 0.00011 3.9E-09 71.7 12.6 121 230-361 221-358 (360)
24 4b9q_A Chaperone protein DNAK; 97.3 0.00039 1.3E-08 73.1 7.9 82 279-369 305-387 (605)
25 3qfu_A 78 kDa glucose-regulate 97.2 0.00082 2.8E-08 66.3 9.0 75 280-363 316-392 (394)
26 3i33_A Heat shock-related 70 k 97.2 0.00079 2.7E-08 66.8 8.7 78 280-366 324-403 (404)
27 3h1q_A Ethanolamine utilizatio 97.2 0.00018 6.1E-09 67.4 3.4 71 278-361 201-272 (272)
28 4gni_A Putative heat shock pro 97.1 0.00093 3.2E-08 66.5 8.5 75 281-364 318-401 (409)
29 1dkg_D Molecular chaperone DNA 96.7 0.0021 7.2E-08 63.2 6.5 46 317-362 334-380 (383)
30 2v7y_A Chaperone protein DNAK; 96.6 0.0042 1.4E-07 63.7 8.3 77 281-366 276-353 (509)
31 3eno_A Putative O-sialoglycopr 96.6 0.014 4.9E-07 56.5 11.5 85 277-371 220-311 (334)
32 3qbx_A Anhydro-N-acetylmuramic 96.5 0.019 6.5E-07 56.0 12.0 106 276-393 255-367 (371)
33 2ivn_A O-sialoglycoprotein end 96.5 0.015 5E-07 56.3 10.9 85 277-371 215-306 (330)
34 3d2f_A Heat shock protein homo 96.4 0.0053 1.8E-07 65.2 7.8 81 278-367 302-386 (675)
35 3vth_A Hydrogenase maturation 96.0 0.024 8.1E-07 60.8 10.5 80 277-366 664-750 (761)
36 1jce_A ROD shape-determining p 96.0 0.0047 1.6E-07 59.8 4.3 45 318-362 279-324 (344)
37 1yuw_A Heat shock cognate 71 k 95.9 0.014 4.8E-07 60.5 7.6 50 317-366 331-382 (554)
38 3ttc_A HYPF, transcriptional r 95.8 0.036 1.2E-06 58.2 10.5 78 276-363 569-651 (657)
39 4g9i_A Hydrogenase maturation 95.6 0.023 7.9E-07 61.1 8.3 82 277-368 676-764 (772)
40 3cqy_A Anhydro-N-acetylmuramic 95.6 0.041 1.4E-06 53.7 9.2 85 277-374 263-354 (370)
41 2kho_A Heat shock protein 70; 95.3 0.016 5.6E-07 60.7 5.6 50 317-366 334-384 (605)
42 3ven_A O-carbamoyltransferase 95.1 0.064 2.2E-06 55.5 9.2 80 278-367 279-361 (576)
43 2ych_A Competence protein PILM 95.0 0.062 2.1E-06 52.4 8.6 63 278-348 275-338 (377)
44 2zgy_A Plasmid segregation pro 93.6 0.089 3E-06 50.2 6.0 43 317-361 273-319 (320)
45 4a2a_A Cell division protein F 93.5 0.065 2.2E-06 53.5 5.1 62 279-348 294-360 (419)
46 3en9_A Glycoprotease, O-sialog 92.7 0.62 2.1E-05 47.8 11.2 85 277-371 219-310 (540)
47 2e2o_A Hexokinase; acetate and 88.2 1.4 4.7E-05 41.2 8.2 73 282-364 215-288 (299)
48 4apw_A ALP12; actin-like prote 85.8 2.2 7.6E-05 40.7 8.3 72 280-362 251-323 (329)
49 2fsj_A Hypothetical protein TA 85.6 1.1 3.8E-05 43.1 6.1 71 281-362 268-343 (346)
50 4htl_A Beta-glucoside kinase; 83.6 5 0.00017 37.4 9.6 73 283-365 214-293 (297)
51 2ch5_A NAGK protein; transfera 81.9 5.1 0.00017 38.0 9.0 75 282-366 233-327 (347)
52 3r8e_A Hypothetical sugar kina 81.9 4.9 0.00017 37.9 8.8 71 283-363 237-319 (321)
53 2gup_A ROK family protein; sug 80.3 7.5 0.00026 35.9 9.4 71 283-363 204-287 (292)
54 2aa4_A Mannac kinase, putative 80.2 4.6 0.00016 37.3 7.9 70 283-362 210-287 (289)
55 2yhx_A Hexokinase B; transfera 79.9 5.1 0.00018 40.1 8.5 49 318-366 385-445 (457)
56 1cza_N Hexokinase type I; stru 78.9 3.4 0.00012 45.3 7.3 84 282-367 374-463 (917)
57 2yhw_A Bifunctional UDP-N-acet 77.9 12 0.00041 35.4 10.3 70 283-364 261-339 (343)
58 2qm1_A Glucokinase; alpha-beta 77.7 7.2 0.00025 36.5 8.5 72 282-363 238-321 (326)
59 4db3_A Glcnac kinase, N-acetyl 76.2 6.5 0.00022 37.2 7.8 69 284-362 247-325 (327)
60 1sz2_A Glucokinase, glucose ki 76.0 9.7 0.00033 36.0 8.9 49 317-365 265-328 (332)
61 3vgl_A Glucokinase; ROK family 74.9 8.4 0.00029 36.2 8.1 73 283-365 229-314 (321)
62 1saz_A Probable butyrate kinas 74.5 7.9 0.00027 37.6 8.0 71 283-361 270-346 (381)
63 3o8m_A Hexokinase; rnaseh-like 74.1 6.7 0.00023 39.6 7.5 88 271-366 368-472 (485)
64 2hoe_A N-acetylglucosamine kin 71.7 19 0.00065 34.7 10.0 73 282-364 290-372 (380)
65 2fxu_A Alpha-actin-1, actin, a 71.7 2.9 0.0001 40.4 4.1 46 317-362 294-348 (375)
66 1bdg_A Hexokinase; phosphotran 71.3 6.4 0.00022 39.4 6.5 74 282-365 366-448 (451)
67 3htv_A D-allose kinase, alloki 69.2 23 0.00079 33.1 9.7 69 282-364 219-300 (310)
68 3hm8_A Hexokinase-3; glucose, 68.2 8.9 0.0003 38.2 6.7 48 319-366 386-439 (445)
69 3f9m_A Glucokinase; hexokinase 67.7 11 0.00037 37.9 7.3 49 319-367 410-464 (470)
70 1zbs_A Hypothetical protein PG 66.7 8.9 0.0003 35.5 6.1 73 281-367 210-284 (291)
71 3vov_A Glucokinase, hexokinase 64.0 13 0.00046 34.5 6.9 72 283-364 214-296 (302)
72 1z05_A Transcriptional regulat 63.5 29 0.001 33.9 9.6 71 283-364 334-416 (429)
73 1z6r_A MLC protein; transcript 61.7 29 0.00099 33.6 9.1 69 283-361 311-391 (406)
74 2q2r_A Glucokinase 1, putative 60.8 24 0.00082 33.8 8.2 71 283-363 281-371 (373)
75 2ap1_A Putative regulator prot 60.4 15 0.00051 34.5 6.5 69 283-361 246-324 (327)
76 2h3g_X Biosynthetic protein; p 59.7 30 0.001 31.8 8.3 71 276-363 182-252 (268)
77 3epq_A Putative fructokinase; 59.1 26 0.0009 32.6 7.9 41 155-196 98-144 (302)
78 3js6_A Uncharacterized PARM pr 54.3 13 0.00046 35.6 5.1 76 278-365 261-338 (355)
79 1zc6_A Probable N-acetylglucos 52.9 14 0.00047 34.3 4.8 65 281-362 226-292 (305)
80 1k8k_A ARP3, actin-like protei 49.5 7 0.00024 38.2 2.2 47 317-363 316-387 (418)
81 1cza_N Hexokinase type I; stru 48.3 24 0.00082 38.5 6.4 47 319-365 857-909 (917)
82 2iir_A Acetate kinase; transfe 47.1 15 0.00052 36.0 4.1 49 284-341 299-348 (403)
83 2f9w_A Pantothenate kinase; CO 46.0 28 0.00097 32.1 5.7 67 276-360 201-267 (271)
84 2d0o_A DIOL dehydratase-reacti 45.9 32 0.0011 35.2 6.3 74 268-346 503-579 (610)
85 2e1z_A Propionate kinase; TDCD 43.2 14 0.00047 36.4 3.1 49 284-341 307-356 (415)
86 3khy_A Propionate kinase; csgi 43.2 16 0.00054 35.6 3.5 49 283-340 289-338 (384)
87 1g99_A Acetate kinase; alpha/b 41.0 14 0.00049 36.2 2.9 49 284-341 299-348 (408)
88 3djc_A Type III pantothenate k 40.6 38 0.0013 31.0 5.6 68 276-361 184-253 (266)
89 1zxo_A Conserved hypothetical 40.3 7 0.00024 36.2 0.5 66 282-362 209-277 (291)
90 1woq_A Inorganic polyphosphate 40.2 32 0.0011 31.1 5.1 46 317-364 215-262 (267)
91 3cet_A Conserved archaeal prot 40.1 42 0.0015 31.9 5.9 68 278-360 247-321 (334)
92 3bex_A Type III pantothenate k 36.4 46 0.0016 30.1 5.4 67 276-361 180-246 (249)
93 1nbw_A Glycerol dehydratase re 33.7 8.2 0.00028 39.5 -0.2 74 268-346 505-581 (607)
94 4am6_A Actin-like protein ARP8 24.3 33 0.0011 35.7 2.4 49 282-342 477-526 (655)
95 3r9p_A ACKA; ssgcid, seattle s 23.6 68 0.0023 31.2 4.3 48 283-339 290-338 (391)
96 1k8k_B ARP2, actin-like protei 23.3 18 0.00061 35.1 0.1 47 317-363 298-364 (394)
97 2nu8_B SCS-beta, succinyl-COA 21.5 1.7E+02 0.0059 28.2 6.8 62 317-378 311-381 (388)
No 1
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=100.00 E-value=1.2e-74 Score=601.90 Aligned_cols=376 Identities=22% Similarity=0.250 Sum_probs=332.3
Q ss_pred ccccCCcccccccccCCcccHHHHHhhh----------hhccccccccchHHHHhhhhcCCCcccccccceEEec-hhhH
Q 046958 17 NLGFIFFPLGPSEHWAGFRLVVENRTVQ----------WRSNKMVPVQRIPELTRSRQQTASSEGETLDRTLMTT-IDTW 85 (417)
Q Consensus 17 ~~~~~g~pl~p~i~W~D~R~~~~~~~~~----------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~-~~dy 85 (417)
.+|.+|+||+|+|+|+|+|+.++++++. +||+++++.++++||+|+++|+|+ +++++.+|++ ++||
T Consensus 88 ~~D~~G~pl~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~---~~~~~~~~l~~~~dy 164 (511)
T 3hz6_A 88 PLDQDHEPLHRAVLYSDKRPLKEAEEINARHGADNLWSALENPMTAASILPKLVFWRASFPQ---AFGRLRHVVLGAKDY 164 (511)
T ss_dssp EECTTSCBSSCEECTTCCCCHHHHHHHHHHHCHHHHHHHHSSCCSTTSHHHHHHHHHHHCHH---HHTTCCEEECSHHHH
T ss_pred EECCCcCCCcCceecCCCCHHHHHHHHHhccCHHHHHHHHCCCCCchhHHHHHHHHHHhChH---HHHHHHHHhcCcHHH
Confidence 5688899999999999999999877652 579999999999999999999996 7899999999 9999
Q ss_pred HHHHHhCCCCCceEEechhhhhhcccccCCCCCCCHHHHHhcCCCCCCCCCccccCcceeeecc------CCCCCCCcEE
Q 046958 86 LIWSLTGGVNGDLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEIRPKIVSNSEIIGKIGK------GCPITGIPIS 159 (417)
Q Consensus 86 i~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~------g~l~~g~pV~ 159 (417)
|.|+||| ++++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|+|++ | |++|+||+
T Consensus 165 l~~~LTG-----~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~l~~~~a~~~G-l~~g~pV~ 238 (511)
T 3hz6_A 165 VVLRLTG-----RHATDRTNASTTGLYRPKDDAWHVELLADYGFSLDLMPRLLEPGEQVGGVSALAARQTG-FVSGTPVL 238 (511)
T ss_dssp HHHHHHS-----CCEECHHHHHHTTCEETTTTEECHHHHHHTTCCGGGSCEECCTTSEEEECCHHHHHHHC-CCTTCEEE
T ss_pred HHHHHhC-----CceeeHhHhhcccceeCCCCCcCHHHHHHhCCCHHHCCCCcCCCCcccccCHHHHHhhC-CCCCCeEE
Confidence 9999999 8999999999999999999999999999999999999999999999999974 7 89999999
Q ss_pred eccchHHHhHhcCcC-CCCceEEeccCcceeeeecCcceecc-CCCceeeeceecCC-------CCCchhhhh---hhcC
Q 046958 160 GCLGNQHAAMLGQAC-KKGEAKSTYGTGAFIRLNTGEEVVKS-KHGLLSTLAFKLGP-------KAPTNYALE---DSLG 227 (417)
Q Consensus 160 ~g~~D~~aa~lg~g~-~~g~~~~s~GTs~~~~~~~~~~~~~~-~~g~~~~~~~~~g~-------~~~~~~~l~---~~~~ 227 (417)
+|++|++|+++|+|+ ++|++++++|||+++.++++.+|..+ +.+...+++|.+++ ...++..++ +.|+
T Consensus 239 ~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~ 318 (511)
T 3hz6_A 239 CGLGDAGAATLGVGVLDDEDAYLHLGTTGWLARLTQTDPVGDMPVGTIFRLAGIIAGKTLQVAPVLNAGNILQWALTLVG 318 (511)
T ss_dssp CCEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEECCCCCSCCSSCCEEECSSSTTEEEEEEEESSSHHHHHHHGGGGT
T ss_pred EECchHHHHHHhCCCCCCCcEEEEecchhhheeecCCeecccCCCCceEEEEEecCCceEEEeehhhHHHHHHHHHHHhc
Confidence 999999999999999 99999999999999988775256666 66666556553311 112222232 5565
Q ss_pred --CCCcHHHHHHHHHhc-CC---CCCeEEccccCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Q 046958 228 --IISNASEIEELALRV-NS---TGGIYFVRAFNGLLAPWWRDDARSVCIGITRFTSKAHFARAVLESMCFLVKDVLDSK 301 (417)
Q Consensus 228 --~~~~~~~l~~~a~~~-~~---~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l 301 (417)
...+|++++++++++ |+ ++|++|+|||.|||+|+||+++||+|+||+..|+++||+||++|||||++|++++.|
T Consensus 319 ~~~~~~~~~l~~~a~~~~~g~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~~~~~~~l 398 (511)
T 3hz6_A 319 HRPGEDCAEYFHMAAAEVQGVTVPDGLLFVPYLHAERCPVELPAPRGALLGVTGATTRAQILLAVLEGAALSLRWCAELL 398 (511)
T ss_dssp CCTTSCSHHHHHHHHHHHTTCCCCTTCEEEEESSCBCSSSCBSSCEEEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccccHHHHHHHHHhCCCCCCCCCCEEEeCCCCCCCCCCCCCccceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445799999999887 58 899999999999999999999999999999999999999999999999999999999
Q ss_pred HhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcE-EccCCCChhHHHHHHHHHHhcCCCCCHHHHHhcc--
Q 046958 302 QKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPV-LRPADIESTALGAAFAAGLAIGVFKEEEIFASSE-- 378 (417)
Q Consensus 302 ~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv-~~~~~~e~salGaAllA~~~~G~~~~~~~~~~~~-- 378 (417)
++ |. +++|+++||++||++|+|++||++|+|| +++...|++|+|||++|+.++|.++|++++.+++
T Consensus 399 ~~--g~---------~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~~~~~~ 467 (511)
T 3hz6_A 399 GM--EK---------VGLLKVVGGGARSEAWLRMIADNLNVSLLVKPDAHLHPLRGLAALAAVELEWSHSIQDFLREADL 467 (511)
T ss_dssp TG--GG---------CCEEEEESGGGGCHHHHHHHHHHHTCEEEECCCGGGHHHHHHHHHHHHHTTSCSCHHHHHHHHHT
T ss_pred hc--CC---------CCEEEEeCchhcCHHHHHHHHHHHCCeeEEecCCCCchHHHHHHHHHHHhCCcCCHHHHHHHhhc
Confidence 86 43 4789999999999999999999999999 9988999999999999999999999997776776
Q ss_pred -ccCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHhccc
Q 046958 379 -RTKTSTTFKPLLNEEFRK-KKAESQCRAVERTFNLA 413 (417)
Q Consensus 379 -~~~~~~~~~P~~~~~~~y-~~y~~~~~~~~~~~~~~ 413 (417)
. +..++|+|++++++.| ++|++|+++|+.++++.
T Consensus 468 ~~-~~~~~~~P~~~~~~~y~~~y~~~~~~~~~l~~~~ 503 (511)
T 3hz6_A 468 RE-PASNILHPQPCDEGRRRRKFERFKQCVETLGRLD 503 (511)
T ss_dssp C----CCCBCCCCCCHHHHHHHHHHHHHHHHHHTC--
T ss_pred cC-CCCeEECcCHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 4 5678999999999988 58999999999988765
No 2
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=100.00 E-value=1.6e-74 Score=600.29 Aligned_cols=381 Identities=37% Similarity=0.557 Sum_probs=334.4
Q ss_pred ccccC-CcccccccccCCcccHHHHHhhh----------hhccccccccchHHHHhhhhcCCCcccccccceE----Eec
Q 046958 17 NLGFI-FFPLGPSEHWAGFRLVVENRTVQ----------WRSNKMVPVQRIPELTRSRQQTASSEGETLDRTL----MTT 81 (417)
Q Consensus 17 ~~~~~-g~pl~p~i~W~D~R~~~~~~~~~----------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~----~~~ 81 (417)
.+|.+ |+|++|+|+|+|+|+.++++++. +||.++++.++++||+|+++|+|+ +++++.+ |++
T Consensus 89 ~~D~~~G~~l~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe---~~~~~~~~~~~~~~ 165 (506)
T 3h3n_X 89 VWDKTTGQPIANAIVWQSRQSSPIADQLKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEG---AQEKADNGELLFGT 165 (506)
T ss_dssp EEETTTCCBSSCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSCCCCTTSHHHHHHHHHHHSTT---HHHHHHTTCEEEEC
T ss_pred EEeCCCCeECCCceEecCcchHHHHHHHHhccCHHHHHHHhCCCCCchhHHHHHHHHHHhCHH---HHHHHhcCCeEEec
Confidence 47776 99999999999999999877653 579999999999999999999997 6777654 888
Q ss_pred hhhHHHHHHhCCCCCceEEechhhhhhcccccCCCCCCCHHHHHhcCCCCCCCCCccccCcceeeeccCC-CCCCCcEEe
Q 046958 82 IDTWLIWSLTGGVNGDLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEIRPKIVSNSEIIGKIGKGC-PITGIPISG 160 (417)
Q Consensus 82 ~~dyi~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~g~-l~~g~pV~~ 160 (417)
++|||.|+|||+ .++++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|.+++.. +.+|+||++
T Consensus 166 ~~dyl~~~LTG~---~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~~lg~g~pV~~ 242 (506)
T 3h3n_X 166 IDSWLVWKLTDG---QVHVTDYSNASRTMLYNIHKLEWDQEILDLLNIPSSMLPEVKSNSEVYGHTRSYRFYGSEVPIAG 242 (506)
T ss_dssp HHHHHHHHHTTT---SCCEEEHHHHHTTTSEETTTTEECHHHHHHTTCCGGGCCEEECSEEEEEECCGGGTTTCCCEEEE
T ss_pred HHHHHHHHhcCC---ceeeeEHHHhhhhhCeecCCCCcCHHHHHHcCcCHHHCCceecCCCcceeeChHHhcCCCCeEEE
Confidence 999999999993 1479999999999999999999999999999999999999999999999998643 448999999
Q ss_pred ccchHHHhHhcCcC-CCCceEEeccCcceeeeecCcceeccCCCceeeeceecCC---------CCCchhhhh---hhcC
Q 046958 161 CLGNQHAAMLGQAC-KKGEAKSTYGTGAFIRLNTGEEVVKSKHGLLSTLAFKLGP---------KAPTNYALE---DSLG 227 (417)
Q Consensus 161 g~~D~~aa~lg~g~-~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~~~~~~~~g~---------~~~~~~~l~---~~~~ 227 (417)
|++|++|+++|+|+ ++|++++++|||+++.++++..|..++.+++.+++|..++ ...++..++ +.|+
T Consensus 243 g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~G~~~~W~~~~~~ 322 (506)
T 3h3n_X 243 MAGDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTGEEPQLSDNDLLTTIGYGINGKVYYALEGSIFVAGSAIQWLRDGLR 322 (506)
T ss_dssp EEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEEEETCCCSCCTTSEEEEEEEETTEEEEEEEEEECCSSHHHHHHHHTSC
T ss_pred ECCcHHHHHHhCCCCCCCcEEEEecchheeeeecCCccccCCCceEEEeeeecCCCCEEEEecchhhHHHHHHHHHHHcC
Confidence 99999999999999 9999999999999887777555665666776656554321 011222222 4566
Q ss_pred CCCcHHHHHHHHHhcCCCCCeEEccccCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 046958 228 IISNASEIEELALRVNSTGGIYFVRAFNGLLAPWWRDDARSVCIGITRFTSKAHFARAVLESMCFLVKDVLDSKQKDAVE 307 (417)
Q Consensus 228 ~~~~~~~l~~~a~~~~~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~ 307 (417)
...+|++++++++++|..++++|+|||.|||+|+||+++||+|+|++..|+++||+||++|||||++|++++.|++..|.
T Consensus 323 ~~~~~~~l~~~a~~~~~~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~ 402 (506)
T 3h3n_X 323 MIETSPQSEELAAKAKGDNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFVRATLQAVAYQSKDVIDTMKKDSGI 402 (506)
T ss_dssp CCSSTTHHHHHHTTCCSCSCCEEECCTTCBCTTTCBTTCCCEEECCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred CCCcHHHHHHHHhcCCCCCceEEeccccCCCCCccCCCCCEEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 55678999999988876699999999999999999999999999999999999999999999999999999999986687
Q ss_pred cccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHHHHHHHHHHhcCCCCCHHHHHhccccCCCcEEe
Q 046958 308 KGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTALGAAFAAGLAIGVFKEEEIFASSERTKTSTTFK 387 (417)
Q Consensus 308 ~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~salGaAllA~~~~G~~~~~~~~~~~~~~~~~~~~~ 387 (417)
+ +++|+++||++||++|+||+||++|+||+++...|++|+|||++|+.++|.++|++++ .++ .+..++|+
T Consensus 403 ~--------~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~-~~~~~~~~ 472 (506)
T 3h3n_X 403 D--------IPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLAGLAVGFWKDLDEL-KSM-AEEGQMFT 472 (506)
T ss_dssp C--------CCEEEEESGGGGCHHHHHHHHHHHTSEEEECSSSCHHHHHHHHHHHHHTTSSCSHHHH-HTT-CCCCCEEC
T ss_pred C--------CCEEEEecccccCHHHHHHHHHHhCCeEEecCCCcchhHHHHHHHHHHhCccCCHHHH-HHh-cCCCeEEC
Confidence 7 8999999999999999999999999999999999999999999999999999999997 445 36789999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhccc
Q 046958 388 PLLNEEFRKKKAESQCRAVERTFNLA 413 (417)
Q Consensus 388 P~~~~~~~y~~y~~~~~~~~~~~~~~ 413 (417)
|+++.+++.++|++|++++++.++|.
T Consensus 473 P~~~~~~~~~~y~~~~~~~~~~~~~~ 498 (506)
T 3h3n_X 473 PEMPAEERDNLYEGWKQAVAATQTFK 498 (506)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhhhh
Confidence 99998765579999999999999875
No 3
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=100.00 E-value=1.2e-74 Score=600.87 Aligned_cols=382 Identities=37% Similarity=0.586 Sum_probs=335.6
Q ss_pred ccccC-CcccccccccCCcccHHHHHhhh----------hhccccccccchHHHHhhhhcCCCcccccccceE----Eec
Q 046958 17 NLGFI-FFPLGPSEHWAGFRLVVENRTVQ----------WRSNKMVPVQRIPELTRSRQQTASSEGETLDRTL----MTT 81 (417)
Q Consensus 17 ~~~~~-g~pl~p~i~W~D~R~~~~~~~~~----------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~----~~~ 81 (417)
.+|.+ |+|++|+|+|+|+|+.+++++++ ++|.++++.++++||+|+++|+|+ +++++.+ |++
T Consensus 90 ~~D~~~G~~l~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~---~~~~~~~~~~l~~~ 166 (501)
T 3g25_A 90 VWDKHTGRPIYHAIVWQSRQTQSICSELKQQGYEQTFRDKTGLLLDPYFAGTKVKWILDNVEG---AREKAENGDLLFGT 166 (501)
T ss_dssp EEETTTCCBSSCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSCCSSTTSHHHHHHHHHHHSTT---HHHHHHTTCEEEEE
T ss_pred EEECCCCeECCCceeeccCChHHHHHHHHhccCHHHHHHHHCCCCCchhHHHHHHHHHHhCHH---HHHHHhcCCeEEec
Confidence 46777 99999999999999999877653 579999999999999999999997 6777765 888
Q ss_pred hhhHHHHHHhCCCCCceEEechhhhhhcccccCCCCCCCHHHHHhcCCCCCCCCCccccCcceeeeccC-CCCCCCcEEe
Q 046958 82 IDTWLIWSLTGGVNGDLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEIRPKIVSNSEIIGKIGKG-CPITGIPISG 160 (417)
Q Consensus 82 ~~dyi~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~g-~l~~g~pV~~ 160 (417)
++|||.|+|||+ .++++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|++++. .+.+|+||++
T Consensus 167 ~~dyl~~~LTG~---~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~~~g~g~pV~~ 243 (501)
T 3g25_A 167 IDTWLVWKLSGK---AAHITDYSNASRTLMFNIHDLEWDDELLELLTVPKNMLPEVKASSEVYGKTIDYHFYGQEVPIAG 243 (501)
T ss_dssp HHHHHHHHHTTT---SCCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGGGCCEEECSEEEEEECCGGGTTTCCCEEEE
T ss_pred HHHHHHHHhcCC---CeeeeeHHHhhcccCeeCCCCCCCHHHHHHhCcCHHHCCceecCCCceeccchHHhCCCCCeEEE
Confidence 999999999993 248899999999999999999999999999999999999999999999999852 1458999999
Q ss_pred ccchHHHhHhcCcC-CCCceEEeccCcceeeeecCcceeccCCCceeeeceecCC---------CCCchhhhh---hhcC
Q 046958 161 CLGNQHAAMLGQAC-KKGEAKSTYGTGAFIRLNTGEEVVKSKHGLLSTLAFKLGP---------KAPTNYALE---DSLG 227 (417)
Q Consensus 161 g~~D~~aa~lg~g~-~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~~~~~~~~g~---------~~~~~~~l~---~~~~ 227 (417)
|++|++|+++|+|+ ++|++++++|||+++.+.+++.|..++.+++.+++|..++ ...++..++ +.|+
T Consensus 244 g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~ 323 (501)
T 3g25_A 244 VAGDQQAALFGQACFERGDVKNTYGTGGFMLMNTGDKAVKSESGLLTTIAYGIDGKVNYALEGSIFVSGSAIQWLRDGLR 323 (501)
T ss_dssp EEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEEEETTEEEEEEEEEESCSTHHHHHHHHTSC
T ss_pred ECccHHHHHHhCCCCCCCcEEEEccchhheeeecCCccccCCCCeEEEeeEecCCccEEEEecccccHHHHHHHHHHHcC
Confidence 99999999999999 9999999999999887777656666666776666554321 011222222 4566
Q ss_pred CCCcHHHHHHHHHhcCCCCCeEEccccCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 046958 228 IISNASEIEELALRVNSTGGIYFVRAFNGLLAPWWRDDARSVCIGITRFTSKAHFARAVLESMCFLVKDVLDSKQKDAVE 307 (417)
Q Consensus 228 ~~~~~~~l~~~a~~~~~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~ 307 (417)
...+|++++++++++|..++++|+|||.|||+|+||+++||+|+|++..|+++||+||++|||||++|++++.|++..|.
T Consensus 324 ~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~~~~~~~l~~~~g~ 403 (501)
T 3g25_A 324 MINSAPQSESYATRVDSTEGVYVVPAFVGLGTPYWDSEARGAIFGLTRGTEKEHFIRATLESLCYQTRDVMEAMSKDSGI 403 (501)
T ss_dssp CCSSGGGHHHHHTTSSCCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHSSC
T ss_pred CCCcHHHHHHHHhhCCCCCeEEEecccccCCCCCCCCCCCEEEEccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 55678999999988876799999999999999999999999999999999999999999999999999999999876687
Q ss_pred cccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHHHHHHHHHHhcCCCCCHHHHHhccccCCCcEEe
Q 046958 308 KGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTALGAAFAAGLAIGVFKEEEIFASSERTKTSTTFK 387 (417)
Q Consensus 308 ~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~salGaAllA~~~~G~~~~~~~~~~~~~~~~~~~~~ 387 (417)
+ +++|+++||++||++|+|++||++|+||+++...|++|+|||++|+.++|.++|++++ +++ .+..++|+
T Consensus 404 ~--------~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~la~~a~G~~~~~~~~-~~~-~~~~~~~~ 473 (501)
T 3g25_A 404 D--------VQSLRVDGGAVKNNFIMQFQADIVNTSVERPEIQETTALGAAFLAGLAVGFWESKDDI-AKN-WKLEEKFD 473 (501)
T ss_dssp C--------CSEEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCTHHH-HHH-CCEEEEEC
T ss_pred C--------CcEEEEecchhcCHHHHHHHHHHhCCceEecCCCcchHHHHHHHHHHHhCccCCHHHH-HHh-ccCCeEEC
Confidence 7 8999999999999999999999999999999999999999999999999999999997 455 36789999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcccc
Q 046958 388 PLLNEEFRKKKAESQCRAVERTFNLAD 414 (417)
Q Consensus 388 P~~~~~~~y~~y~~~~~~~~~~~~~~~ 414 (417)
|+++++++.++|++|++++++.++|.-
T Consensus 474 P~~~~~~~~~~y~~~~~~~~~~~~~~~ 500 (501)
T 3g25_A 474 PKMDEGEREKLYRGWKKAVEATQVFKT 500 (501)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhcccc
Confidence 999987655799999999999998853
No 4
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=100.00 E-value=8.7e-75 Score=602.43 Aligned_cols=374 Identities=18% Similarity=0.149 Sum_probs=327.3
Q ss_pred ccccCCcccccccccCCcccHHHHHhhh----------hhccccccccchHHHHhhhhcCCCcccccccceEEechhhHH
Q 046958 17 NLGFIFFPLGPSEHWAGFRLVVENRTVQ----------WRSNKMVPVQRIPELTRSRQQTASSEGETLDRTLMTTIDTWL 86 (417)
Q Consensus 17 ~~~~~g~pl~p~i~W~D~R~~~~~~~~~----------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~dyi 86 (417)
.+|.+|+|++|+|+|+|+|+.+++++++ +||+++++.++++||+|+++|+|+ +++++.+|++++|||
T Consensus 91 ~~D~~G~~l~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~---~~~~~~~~l~~~dyl 167 (508)
T 3ifr_A 91 LLDDRGAVLRPSIQQSDGRCGDEVAELRAEVDSEAFLARTGNGVTQQLVTAKLRWIERHEPA---VFGAIATVCGSYDYI 167 (508)
T ss_dssp EECTTSCBCSCEECTTCCCCHHHHHHHHHHSCHHHHHHHHSSCSSTTSHHHHHHHHHHHCHH---HHHTCSEEECHHHHH
T ss_pred EECCCCCCcccceeccccChHHHHHHHHhhccHHHHHHHHCCCCChhhHHHHHHHHHHcCHH---HHHHHhhhcCchHHH
Confidence 5788899999999999999999877652 679999999999999999999997 789999999999999
Q ss_pred HHHHhCCCCCceEEechhhhhhcccccCCCCCCCHHHHHhcCCCCCCCCCccccCcceeeecc------CCCCCCCcEEe
Q 046958 87 IWSLTGGVNGDLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEIRPKIVSNSEIIGKIGK------GCPITGIPISG 160 (417)
Q Consensus 87 ~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~------g~l~~g~pV~~ 160 (417)
.|+||| +.++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|+|++ | |++|+||++
T Consensus 168 ~~~LTG-----~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~l~~~~a~~~G-l~~g~pV~~ 241 (508)
T 3ifr_A 168 NMLLTG-----ERVVDRNWALEGGFIDLASGTVEADLVALAHIPPSAVPPAHPTHRVLGAVTAEAAALTG-LPTGLPVYG 241 (508)
T ss_dssp HHHHHC-----CCCEEHHHHHHHTCEETTTTEECHHHHHTTTSCGGGSCCEECTTSEEEECCHHHHHHHC-CCTTCEEEC
T ss_pred HHHhcC-----CccccHhHhhcccCccCccCCCCHHHHHHcCCCHHHCCCCcCCCCeeeccCHHHHHHhC-CCCCCeEEE
Confidence 999999 8899999999999999999999999999999999999999999999999984 7 999999999
Q ss_pred ccchHHHhHhcCcC-CCCceEEeccCcceeeeecCcceeccCCCceeeeceecCC-------CCCchhhhh---hhcCCC
Q 046958 161 CLGNQHAAMLGQAC-KKGEAKSTYGTGAFIRLNTGEEVVKSKHGLLSTLAFKLGP-------KAPTNYALE---DSLGII 229 (417)
Q Consensus 161 g~~D~~aa~lg~g~-~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~~~~~~~~g~-------~~~~~~~l~---~~~~~~ 229 (417)
|++|++|+++|+|+ ++|++++++|||+++.++++ +|..++. ..++++...+ ...++..++ +.|+..
T Consensus 242 g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~~~~~--~~~~~~~~~g~~~~~g~~~~~G~~~~W~~~~~~~~ 318 (508)
T 3ifr_A 242 GAADHIASALAAGITRPGDVLLKFGGAGDIIVASA-TAKSDPR--LYLDYHLVPGLYAPNGCMAATGSALNWLAKLLAPE 318 (508)
T ss_dssp CEEHHHHHHHHTTCCSTTEEEEEESSSEEEEECBS-CCCCBTT--BBCCBCSSTTCBCCEEEESSSHHHHHHHHHHHSTT
T ss_pred ECchHHHHHHhCCCCCCCcEEEEechhhhheeeCC-CcccCCC--cceeeeecCCceEEechhhhhHHHHHHHHHHHhhc
Confidence 99999999999999 99999999999999988875 4555443 3345543211 011222222 445311
Q ss_pred -C--cHHHHHHHHHhc-CCCCCeEEccccCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 046958 230 -S--NASEIEELALRV-NSTGGIYFVRAFNGLLAPWWRDDARSVCIGITRFTSKAHFARAVLESMCFLVKDVLDSKQKDA 305 (417)
Q Consensus 230 -~--~~~~l~~~a~~~-~~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~ 305 (417)
. +|+++++++++. ++++|++|+|||.|||+|+|||++||+|+|++..|+++||+||++|||||++|++++.|++ .
T Consensus 319 ~~~~~~~~l~~~a~~~~~~~~gl~flP~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~-~ 397 (508)
T 3ifr_A 319 AGEAAHAQLDALAAEVPAGADGLVCLPYFLGEKTPIHDPFASGTFTGLSLSHTRGHLWRALLEAVALAFRHHVAVLDD-I 397 (508)
T ss_dssp CTTHHHHHHHHHHHTSCTTGGGCEEECCTTCCC----CCCCCCEEESCCTTCCHHHHHHHHHHHHHHHHHHHHHHHHH-H
T ss_pred CCCCCHHHHHHHHhcCCCCCCCeEEecCCCCCCCCCCCCCcCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh-c
Confidence 2 699999998876 5899999999999999999999999999999999999999999999999999999999997 4
Q ss_pred cccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHHHHHHHHHHhcCCCCCHHHHHhccccCCCcE
Q 046958 306 VEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTALGAAFAAGLAIGVFKEEEIFASSERTKTSTT 385 (417)
Q Consensus 306 g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~salGaAllA~~~~G~~~~~~~~~~~~~~~~~~~ 385 (417)
|.+ +++|+++||++||++|+|++||++|+||++++..|++|+|||++|+.++|.++|++++. ++ .+..++
T Consensus 398 g~~--------~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~~-~~-~~~~~~ 467 (508)
T 3ifr_A 398 GHA--------PQRFFASDGGTRSRVWMGIMADVLQRPVQLLANPLGSAVGAAWVAAIGGGDDLGWDDVT-AL-VRTGEK 467 (508)
T ss_dssp TCC--------CCEEEEESGGGGCHHHHHHHHHHHTSCEEEEECCSTHHHHHHHHHHHHTCSSCCGGGGG-GG-SEEEEE
T ss_pred CCC--------CCEEEEeCCcccCHHHHHHHHHHhCCeEEecCCCCchHHHHHHHHHHHhCCCCCHHHHH-hh-cCCCeE
Confidence 877 89999999999999999999999999999999899999999999999999999999874 45 367889
Q ss_pred EeCCCCHHHHH-HHHHHHHHHHHHHhccc
Q 046958 386 FKPLLNEEFRK-KKAESQCRAVERTFNLA 413 (417)
Q Consensus 386 ~~P~~~~~~~y-~~y~~~~~~~~~~~~~~ 413 (417)
|+|++++++.| ++|++|+++|++++++.
T Consensus 468 ~~P~~~~~~~y~~~y~~~~~~~~~~~~~~ 496 (508)
T 3ifr_A 468 ITPDPAKAEVYDRLYRDFSALYATLHPFF 496 (508)
T ss_dssp ECCCGGGHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999998 58999999999988743
No 5
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=100.00 E-value=1.7e-74 Score=599.63 Aligned_cols=373 Identities=22% Similarity=0.274 Sum_probs=328.3
Q ss_pred ccccCCcccccccccCCcccHHHHHhhh----------hhccccccccchHHHHhhhhcCCCcccccccceEEechhhHH
Q 046958 17 NLGFIFFPLGPSEHWAGFRLVVENRTVQ----------WRSNKMVPVQRIPELTRSRQQTASSEGETLDRTLMTTIDTWL 86 (417)
Q Consensus 17 ~~~~~g~pl~p~i~W~D~R~~~~~~~~~----------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~dyi 86 (417)
.+|.+|+||+|+|+|+|+|+.++++++. +||+++++.++++||+|+++|+|+ +++++.+|++++|||
T Consensus 85 ~~D~~G~pl~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~pe---~~~~~~~~~~~~dyl 161 (504)
T 3ll3_A 85 GLGSDDELLTNSITWADNCAKSIVQDAKNRGFAQQIYRKTGMPMHPMAPIYKLLWLKNKKTE---VFSQAQKWIGIKEYI 161 (504)
T ss_dssp EECTTSCBSSCEECTTCCTTHHHHHHHHHHTHHHHHHHHHCCCSCTTSHHHHHHHHHHHCHH---HHHHCCEEECHHHHH
T ss_pred EECCCCCCcccceeCCccCHHHHHHHHHhccCHHHHHHHHCCCCCcccHHHHHHHHHHcChH---HHHHHhheeCHHHHH
Confidence 4678899999999999999999877653 679999999999999999999997 789999999999999
Q ss_pred HHHHhCCCCCceEEechhhhhhcccccCCCCCCCHHHHHhcCCCCCCCCCccccCcceeeecc------CCCCCCCcEEe
Q 046958 87 IWSLTGGVNGDLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEIRPKIVSNSEIIGKIGK------GCPITGIPISG 160 (417)
Q Consensus 87 ~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~------g~l~~g~pV~~ 160 (417)
.|+||| ++++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|+|++ | |++|+||++
T Consensus 162 ~~~LTG-----~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~l~~~~a~~~G-l~~g~pV~~ 235 (504)
T 3ll3_A 162 IFRLTG-----KLVTDTTMAAGTGILNLKTLTWDQELLDILKIKKEQLPKIAQPTKVIFPIKTEYVKKLG-IDSDTKIIL 235 (504)
T ss_dssp HHHHHS-----CCEEEHHHHTTTTCBCTTTSSBCHHHHHHHTCCGGGSCEEECTTCEECCCCHHHHHHHT-CCTTCEEEE
T ss_pred HHHHhC-----CcccchhHhhcccCeeCCCCCcCHHHHHHcCCCHHHCCCeeCCcceeeccCHHHHHhcC-CCcCCCEEE
Confidence 999999 8999999999999999999999999999999999999999999999999974 7 899999999
Q ss_pred ccchHHHhHhcCcC-CCCceEEeccCcceeeeecCcceeccCCCceeeeceecC--------CCCCchhhhh---hhcCC
Q 046958 161 CLGNQHAAMLGQAC-KKGEAKSTYGTGAFIRLNTGEEVVKSKHGLLSTLAFKLG--------PKAPTNYALE---DSLGI 228 (417)
Q Consensus 161 g~~D~~aa~lg~g~-~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~~~~~~~~g--------~~~~~~~~l~---~~~~~ 228 (417)
|++|++|+++|+|+ ++|++++++|||+++.++++ +|..++.+.+ ++|... ....++..++ +.|+.
T Consensus 236 g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~~ 312 (504)
T 3ll3_A 236 GASDGYLSTIGVNAIDSDHCALNVGTSGAIRTIVD-QPKIDPSASY--FCYPADKTHYLLGGPVNNGGIVFNWARQTLFD 312 (504)
T ss_dssp EEEHHHHHHHTTTCCSTTEEEEEESSSEEEEEEES-SCCCCTTCCS--EEEEEETTEEEEEEEESCSHHHHHHHHHHHTC
T ss_pred EccHHHHHHHhCCCCCCCcEEEEechhhhheeeCC-CcccCCCCce--EEEEeCCCeEEEEeehhhHHHHHHHHHHHhcc
Confidence 99999999999999 99999999999999988875 5555555543 333221 1112222222 34432
Q ss_pred -CCcHHHHHHHHHhcC-CCCCeEEccccCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 046958 229 -ISNASEIEELALRVN-STGGIYFVRAFNGLLAPWWRDDARSVCIGITRFTSKAHFARAVLESMCFLVKDVLDSKQKDAV 306 (417)
Q Consensus 229 -~~~~~~l~~~a~~~~-~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g 306 (417)
...++++.++++++| +++|++|+|||.|||+|+||+++||+|+||+..|+++||+||++|||||++|++++.|++. |
T Consensus 313 ~~~~~~~~~~~a~~~~~g~~gl~~~P~~~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~~~~l~~~-g 391 (504)
T 3ll3_A 313 ADETPQDFLDVAQTAPAGSRNLIFLPYLGGERAPIWDANARGSFVGLTRMHQKPEMARAVIEGIIFNLYDAASNLIKN-T 391 (504)
T ss_dssp TTCCHHHHHHHHHTSCTTGGGCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHTT-S
T ss_pred chhHHHHHHHHHhcCCCCCCCeEEecCccCCCCCCCCCccCeEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHc-C
Confidence 234555555777775 7899999999999999999999999999999999999999999999999999999999874 6
Q ss_pred ccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHHHHHHHHHHhcCCCCCHHHHHhccccCCCcEE
Q 046958 307 EKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTALGAAFAAGLAIGVFKEEEIFASSERTKTSTTF 386 (417)
Q Consensus 307 ~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~salGaAllA~~~~G~~~~~~~~~~~~~~~~~~~~ 386 (417)
.+ +++|+++||++||++|+||+||++|+||++++..|++|+|||++|+.++|.++|++++ +++ .+..++|
T Consensus 392 ~~--------~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~-~~~~~~~ 461 (504)
T 3ll3_A 392 KK--------PVAINATGGFLKSDFVRQLCANIFNVPIVTMKEQQSGTLAAMFLARQALGLNQDLSEI-GQF-AQADKVY 461 (504)
T ss_dssp CC--------CSEEEEESGGGCSHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTSCCSGGGG-GGT-SCEEEEE
T ss_pred CC--------CCEEEEeCchhcCHHHHHHHHHhhCCeEEecCCCCchhHHHHHHHHHHcCccCCHHHH-HHh-cCCCeEE
Confidence 66 8999999999999999999999999999999999999999999999999999999875 666 3678999
Q ss_pred eCCCCHHHHH-HHHHHHHHHHHHHhcc
Q 046958 387 KPLLNEEFRK-KKAESQCRAVERTFNL 412 (417)
Q Consensus 387 ~P~~~~~~~y-~~y~~~~~~~~~~~~~ 412 (417)
+|++++++.| ++|++|+++|++++++
T Consensus 462 ~P~~~~~~~Y~~~y~~y~~l~~~l~~~ 488 (504)
T 3ll3_A 462 FPNPKEAATYQKLFPLYCEIRNALAAS 488 (504)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999 5899999999998874
No 6
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=1.2e-74 Score=601.71 Aligned_cols=382 Identities=38% Similarity=0.571 Sum_probs=335.3
Q ss_pred ccccC-CcccccccccCCcccHHHHHhhh----------hhccccccccchHHHHhhhhcCCCcccccccceE----Eec
Q 046958 17 NLGFI-FFPLGPSEHWAGFRLVVENRTVQ----------WRSNKMVPVQRIPELTRSRQQTASSEGETLDRTL----MTT 81 (417)
Q Consensus 17 ~~~~~-g~pl~p~i~W~D~R~~~~~~~~~----------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~----~~~ 81 (417)
.+|.+ |+|++|+|+|+|+|+.++++++. ++|.++++.++++||+|+++|+|+ +++++.+ |++
T Consensus 87 ~~D~~~G~~l~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~pe---~~~~~~~~~~l~~~ 163 (510)
T 2p3r_A 87 VWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEG---SRERARRGELLFGT 163 (510)
T ss_dssp EEETTTCCBSSCEECTTCCTTHHHHHHHHHTTCHHHHHHHHCCCSSTTSHHHHHHHHHHHSTT---HHHHHHTTCEEEEC
T ss_pred EEECCCCeECcccccccCccHHHHHHHHHhcccHHHHHHHhCCCCCcccHHHHHHHHHHcCHH---HHHHHhcCCeEecC
Confidence 57776 99999999999999999987663 579999999999999999999997 6777766 888
Q ss_pred hhhHHHHHHhCCCCCceEEechhhhhhcccccCCCCCCCHHHHHhcCCCCCCCCCccccCcceeeeccCCC-CCCCcEEe
Q 046958 82 IDTWLIWSLTGGVNGDLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEIRPKIVSNSEIIGKIGKGCP-ITGIPISG 160 (417)
Q Consensus 82 ~~dyi~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~g~l-~~g~pV~~ 160 (417)
++|||.|+|||+ .++++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|.++...+ ++|+||++
T Consensus 164 ~~dyl~~~LTG~---~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~lG~~g~pV~~ 240 (510)
T 2p3r_A 164 VDTWLIWKMTQG---RVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIDGKGGTRIPISG 240 (510)
T ss_dssp HHHHHHHHHTTT---SCCEEEHHHHHTTSSEETTTTEECHHHHHHHTCCGGGCCEEECSEEEEEEECTTCTTSCCEEEEE
T ss_pred HHHHHHHHhcCC---CeEEeehhHhhhhccccCccCCCCHHHHHHhCCCHHHCCceecCCCceeeechhhcCCCCCeEEE
Confidence 999999999993 25789999999999999999999999999999999999999999999999986425 78999999
Q ss_pred ccchHHHhHhcCcC-CCCceEEeccCcceeeeecCcceeccCCCceeeeceecCC---------CCCchhhhh---hhcC
Q 046958 161 CLGNQHAAMLGQAC-KKGEAKSTYGTGAFIRLNTGEEVVKSKHGLLSTLAFKLGP---------KAPTNYALE---DSLG 227 (417)
Q Consensus 161 g~~D~~aa~lg~g~-~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~~~~~~~~g~---------~~~~~~~l~---~~~~ 227 (417)
|++|++|+++|+|+ ++|++++++|||+++.+.+.+.|..++.+.+.+++|..+. ...++..++ +.|+
T Consensus 241 g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~ 320 (510)
T 2p3r_A 241 IAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMK 320 (510)
T ss_dssp EEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTCCCCCSSSCEEEEEECTTSCEEEEEEEEESCSHHHHHHHHHTSC
T ss_pred ECchHHHHHHhcCCCCCCcEEEeecchheeEEecCCccccCCCCeeEEEeeecCCCceEEEccchhhHHHHHHHHHHHcc
Confidence 99999999999999 9999999999999877777556666666776666654321 011222222 4566
Q ss_pred CCCcHHHHHHHHHhcCCCCCeEEccccCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 046958 228 IISNASEIEELALRVNSTGGIYFVRAFNGLLAPWWRDDARSVCIGITRFTSKAHFARAVLESMCFLVKDVLDSKQKDAVE 307 (417)
Q Consensus 228 ~~~~~~~l~~~a~~~~~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~ 307 (417)
...+|++++++++++++++|++|+|||.|||+|+||+++||+|+|++..|+++||+||++|||||++|++++.|++..|.
T Consensus 321 ~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~~~~l~~~~g~ 400 (510)
T 2p3r_A 321 LINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGI 400 (510)
T ss_dssp CCCSSSCHHHHHTTSSSCTTCEEECCTTCCBTTTCCTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred CCCcHHHHHHHHhhCCCCCceEEeCcccCCCCCCCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 55678889999988888899999999999999999999999999999999999999999999999999999999986687
Q ss_pred cccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHHHHHHHHHHhcCCCCCHHHHHhccccCCCcEEe
Q 046958 308 KGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTALGAAFAAGLAIGVFKEEEIFASSERTKTSTTFK 387 (417)
Q Consensus 308 ~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~salGaAllA~~~~G~~~~~~~~~~~~~~~~~~~~~ 387 (417)
+ +++|+++||++||++|+||+||++|+||+++...|++|+|||++|+.++|.++|++++ +++ .+..++|+
T Consensus 401 ~--------~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~-~~~-~~~~~~~~ 470 (510)
T 2p3r_A 401 R--------LHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDEL-QEK-AVIEREFR 470 (510)
T ss_dssp C--------CSEEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHHHHHTSSSCGGGG-TTC-CCEEEEEC
T ss_pred C--------ccEEEEeCchhcCHHHHHHHHHHhCCceEecCCCCcHHHHHHHHHHHHhCccCCHHHH-HHh-cCCCeEEC
Confidence 7 8999999999999999999999999999999999999999999999999999999886 555 36789999
Q ss_pred CCCCHHHHH-HHHHHHHHHHHHHhccccc
Q 046958 388 PLLNEEFRK-KKAESQCRAVERTFNLADL 415 (417)
Q Consensus 388 P~~~~~~~y-~~y~~~~~~~~~~~~~~~~ 415 (417)
|+++. +.| ++|++|++++++.++|..+
T Consensus 471 P~~~~-~~~~~~y~~~~~~~~~~~~~~~~ 498 (510)
T 2p3r_A 471 PGIET-TERNYRYAGWKKAVKRAMAWEEH 498 (510)
T ss_dssp CCSCH-HHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CCCCH-HHHHHHHHHHHHHHHHHhhhhcc
Confidence 99875 455 7899999999999998654
No 7
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=100.00 E-value=2.1e-74 Score=601.01 Aligned_cols=377 Identities=37% Similarity=0.553 Sum_probs=325.1
Q ss_pred ccc-cCCcccccccccCCcccHHHHHhhh----------hhccccccccchHHHHhhhhcCCCcccccccce----EEec
Q 046958 17 NLG-FIFFPLGPSEHWAGFRLVVENRTVQ----------WRSNKMVPVQRIPELTRSRQQTASSEGETLDRT----LMTT 81 (417)
Q Consensus 17 ~~~-~~g~pl~p~i~W~D~R~~~~~~~~~----------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~----~~~~ 81 (417)
.+| .+|+|++|+|+|+|+|+.+++++++ +||.++++.++++||+|+++|+|+ +++++. .|++
T Consensus 110 ~~D~~~G~~l~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~Pe---~~~~~~~~~~~~~~ 186 (520)
T 4e1j_A 110 VWDRETGKPIHNAIVWQDRRTAAFCDKLKKKGLEKTFVKKTGLLLDPYFSGTKLNWLLSNVKG---AQVRAAKGELCFGT 186 (520)
T ss_dssp EEETTTCCBSSCEECTTCCTTHHHHHHHHHTTCHHHHHHHHSSCSSTTSHHHHHHHHHHHSTT---HHHHHHTTCEEEEE
T ss_pred EEECCCCeECccccccccCCHHHHHHHHHhcccHHHHHHHHCCCCCchhHHHHHHHHHHcChH---HHHHHhcCCeEecC
Confidence 477 5899999999999999999887653 579999999999999999999997 677765 4778
Q ss_pred hhhHHHHHHhCCCCCceEEechhhhhhcccccCCCCCCCHHHHHhcCCCCCCCCCccccCcceeeecc-CCCCCCCcEEe
Q 046958 82 IDTWLIWSLTGGVNGDLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEIRPKIVSNSEIIGKIGK-GCPITGIPISG 160 (417)
Q Consensus 82 ~~dyi~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~-g~l~~g~pV~~ 160 (417)
++|||.|+|||. ...++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|.++. + |++|+||++
T Consensus 187 ~~dyl~~~LTG~---~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~-l~~g~pV~~ 262 (520)
T 4e1j_A 187 IDTFLIWRLTGG---ECFCTDATNASRTLLYNIAENAWDDELTEVLRVPKEMLPEVKDCAADFGVTDPSL-FGAAIPILG 262 (520)
T ss_dssp HHHHHHHHHTTT---CCCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGGGSCEEECSBSCCCBCCHHH-HTSCCBEEE
T ss_pred HHHHHHHHhcCC---CeeeecHHHhhhhcccccccCCCCHHHHHHcCCCHHHCCceecCCCceeeeChhh-CCCCCeEEE
Confidence 999999999992 02799999999999999999999999999999999999999999999999975 5 778999999
Q ss_pred ccchHHHhHhcCcC-CCCceEEeccCcceeeeecCcceeccCCCceeeeceecCC---------CCCchhhhh---hhcC
Q 046958 161 CLGNQHAAMLGQAC-KKGEAKSTYGTGAFIRLNTGEEVVKSKHGLLSTLAFKLGP---------KAPTNYALE---DSLG 227 (417)
Q Consensus 161 g~~D~~aa~lg~g~-~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~~~~~~~~g~---------~~~~~~~l~---~~~~ 227 (417)
|++|++|+++|+|+ ++|++++++|||+++.++++++|..++.+++.+++|..+. ...++..++ +.|+
T Consensus 263 g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~~~~~ 342 (520)
T 4e1j_A 263 VAGDQQAATIGQACFKPGMLKSTYGTGCFALLNTGKDMVRSKNRLLTTIAYRLDGETTYALEGSIFVAGAAVQWLRDGLK 342 (520)
T ss_dssp ECCHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTCCCCCSSSCEEEEEEEETTEEEEEEEEEESCSHHHHHHHHHTTC
T ss_pred ECCcHHHHHHhCCCCCCCcEEEEecCchheEEecCCccccCCCceeeEEeEecCCCceEEEcchHhhHHHHHHHHHHHcC
Confidence 99999999999999 9999999999999887777556666666776555554321 011222222 4566
Q ss_pred CCCcHHHHHHHHHhcCCCCCeEEccccCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh---
Q 046958 228 IISNASEIEELALRVNSTGGIYFVRAFNGLLAPWWRDDARSVCIGITRFTSKAHFARAVLESMCFLVKDVLDSKQKD--- 304 (417)
Q Consensus 228 ~~~~~~~l~~~a~~~~~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~--- 304 (417)
...+|++++++++++|++++++|+|||.|||+|+||+++||+|+||+..|+++||+||++|||||++|++++.|++.
T Consensus 343 ~~~~~~~l~~~a~~~~~~~gl~~lP~l~Ger~P~~d~~arg~~~Gl~~~~~~~~l~RAvlEgia~~~r~~l~~l~~~~~~ 422 (520)
T 4e1j_A 343 VIKAAPDTGSLAESADPSQEVYLVPAFTGLGAPHWDPDARGAIFGMTRNTGPAEFARAALEAVCYQTRDLLEAMHKDWRR 422 (520)
T ss_dssp CC-----CHHHHHTSCTTCCCEEECCTTCBCTTTCBTTCCCEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC-
T ss_pred CcccHHHHHHHHhcCCCCCcEEEEcCccCCCCCCCCCCCCEEEecccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 55678899999998889999999999999999999999999999999999999999999999999999999999985
Q ss_pred ccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHHHHHHHHHHhcCCCCCHHHHHhccccCCCc
Q 046958 305 AVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTALGAAFAAGLAIGVFKEEEIFASSERTKTST 384 (417)
Q Consensus 305 ~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~salGaAllA~~~~G~~~~~~~~~~~~~~~~~~ 384 (417)
.| + +++|+++||++||++|+||+|||+|+||++++..|++|+|||++|+.++|.|+|++++. ++ .+..+
T Consensus 423 ~g-~--------~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~~~-~~-~~~~~ 491 (520)
T 4e1j_A 423 NG-N--------DTVLRVDGGMVASDWTMQRLSDLLDAPVDRPVILETTALGVAWLAGSRAGVWPNQEAFA-KS-WARDR 491 (520)
T ss_dssp -------------CCEEEESGGGGCHHHHHHHHHHHTSCEEEESCCCHHHHHHHHHHHHHHTSSCCHHHHH-HT-CCEEE
T ss_pred CC-C--------cceEEEeCccccCHHHHHHHHHHhCCeEEecCCCccHHHHHHHHHHHHcCCcCCHHHHH-hh-cCCCe
Confidence 47 6 89999999999999999999999999999999999999999999999999999999985 44 36788
Q ss_pred EEeCCCCHHHHHHHHHHHHHHHHHHhc
Q 046958 385 TFKPLLNEEFRKKKAESQCRAVERTFN 411 (417)
Q Consensus 385 ~~~P~~~~~~~y~~y~~~~~~~~~~~~ 411 (417)
+|+|+++++++.++|++|++++++.++
T Consensus 492 ~~~P~~~~~~~~~~y~~~~~~~~~~~~ 518 (520)
T 4e1j_A 492 RFEPHMDEATRKVKLKGWRSAVKRTLI 518 (520)
T ss_dssp EECCCSCHHHHHHHHHHHHHHHHHHHC
T ss_pred EECCCCCHHHHHHHHHHHHHHHHHHhc
Confidence 999999988865799999999999764
No 8
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=100.00 E-value=3.3e-74 Score=600.60 Aligned_cols=384 Identities=38% Similarity=0.577 Sum_probs=329.1
Q ss_pred cccc-CCcccccccccCCcccHHHHHhhh----------hhccccccccchHHHHhhhhcCCCcccccccceE----Eec
Q 046958 17 NLGF-IFFPLGPSEHWAGFRLVVENRTVQ----------WRSNKMVPVQRIPELTRSRQQTASSEGETLDRTL----MTT 81 (417)
Q Consensus 17 ~~~~-~g~pl~p~i~W~D~R~~~~~~~~~----------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~----~~~ 81 (417)
.+|. +|+||+|+|+|+|+|+.++++++. +||.++++.++++||+|+++|.|+ +++++.+ +..
T Consensus 88 ~~D~~~G~pl~~ai~W~D~R~~~~~~~l~~~~~~~~i~~~tG~~~~~~~~~~kl~Wl~~~~p~---~~~~~~~~~~~~~~ 164 (526)
T 3ezw_A 88 VWEKETGKPIYNAIVWQCRRTAEICEHLKRDGLEDYIRSNTGLVIDPYFSGTKVKWILDHVEG---SRERARRGELLFGT 164 (526)
T ss_dssp EEETTTCCBSSCEECTTCCTTHHHHHHHHHTTCHHHHHHHHCCCSSTTSHHHHHHHHHHHSTT---HHHHHHTTCEEEEC
T ss_pred EEECCCCeEcccceecCCcchHHHHHHHHhhccHHHHHHHhCCCCCcccHHHHHHHHHHcCch---HHHHHHHhhhhccc
Confidence 3554 499999999999999999987663 579999999999999999999997 5666654 677
Q ss_pred hhhHHHHHHhCCCCCceEEechhhhhhcccccCCCCCCCHHHHHhcCCCCCCCCCccccCcceeeeccCC-CCCCCcEEe
Q 046958 82 IDTWLIWSLTGGVNGDLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEIRPKIVSNSEIIGKIGKGC-PITGIPISG 160 (417)
Q Consensus 82 ~~dyi~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~g~-l~~g~pV~~ 160 (417)
+++||.|+|||+ ...++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|.++..+ +..|+||++
T Consensus 165 i~~~L~~~Lt~g---~~~~td~s~As~t~l~d~~~~~w~~~ll~~~gi~~~~LP~i~~~~~~~G~~~~~~~~~~gipV~~ 241 (526)
T 3ezw_A 165 VDTWLIWKMTQG---RVHVTDYTNASRTMLFNIHTLDWDDKMLEVLDIPREMLPEVRRSSEVYGQTNIDGKGGTRIPISG 241 (526)
T ss_dssp HHHHHHHHHTTT---SCCEEEHHHHTTSSSEETTTTEECHHHHHHHTCCGGGCCEEECSEEEEEEECTTCTTSCCEEEEE
T ss_pred hhHHHhhhhcCC---CceEEEchhhccccCcCccccCcCHHHHHHcCCCHHHCCCccccccccCccchhhhcCCCCcEEE
Confidence 899999999974 2578999999999999999999999999999999999999999999999998653 567999999
Q ss_pred ccchHHHhHhcCcC-CCCceEEeccCcceeeeecCcceeccCCCceeeeceec---------CCCCCchhhhh---hhcC
Q 046958 161 CLGNQHAAMLGQAC-KKGEAKSTYGTGAFIRLNTGEEVVKSKHGLLSTLAFKL---------GPKAPTNYALE---DSLG 227 (417)
Q Consensus 161 g~~D~~aa~lg~g~-~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~~~~~~~~---------g~~~~~~~~l~---~~~~ 227 (417)
|++|++|+++|+|+ ++|++.+++|||+++.++++..+..+..+......+.. |....++..++ +.|+
T Consensus 242 g~gD~~aa~~G~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~eg~~~~~G~~~~Wl~~~~~ 321 (526)
T 3ezw_A 242 IAGDQQAALFGQLCVKEGMAKNTYGTGCFMLMNTGEKAVKSENGLLTTIACGPTGEVNYALEGAVFMAGASIQWLRDEMK 321 (526)
T ss_dssp EEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEECTTSCEEEEEEEEESCSHHHHHHHHHTSC
T ss_pred EcchHHHHhhhccccccceeEEEeccCeeEecccCCccccccccceeeeeeccCCcceeeeHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999 99999999999999888886555445555443322211 10011222222 4565
Q ss_pred CCCcHHHHHHHHHhcCCCCCeEEccccCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 046958 228 IISNASEIEELALRVNSTGGIYFVRAFNGLLAPWWRDDARSVCIGITRFTSKAHFARAVLESMCFLVKDVLDSKQKDAVE 307 (417)
Q Consensus 228 ~~~~~~~l~~~a~~~~~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~ 307 (417)
......+.+.++...++++|++|+|||.|+|+|+|||++||+|+||+..|+++||+||++|||||++|++++.|++.+|.
T Consensus 322 ~~~~~~~~~~~~~~~~~~~gl~~lP~~~G~r~P~~d~~arG~~~Glt~~~~~~~i~RAvlEgia~~~r~~le~l~~~~g~ 401 (526)
T 3ezw_A 322 LINDAYDSEYFATKVQNTNGVYVVPAFTGLGAPYWDPYARGAIFGLTRGVNANHIIRATLESIAYQTRDVLEAMQADSGI 401 (526)
T ss_dssp CCCSSSCHHHHHTTSSSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_pred cccchhHHHHHHhccCCCCCeEEeCCCCCCCCCCCCcccCeEEecCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 54333334455556678999999999999999999999999999999999999999999999999999999999877788
Q ss_pred cccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHHHHHHHHHHhcCCCCCHHHHHhccccCCCcEEe
Q 046958 308 KGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTALGAAFAAGLAIGVFKEEEIFASSERTKTSTTFK 387 (417)
Q Consensus 308 ~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~salGaAllA~~~~G~~~~~~~~~~~~~~~~~~~~~ 387 (417)
+ +++|+++||++||++|+||+|||+|+||++++..|++|+|||++|++++|.|+|++++.+.+ ...++|+
T Consensus 402 ~--------~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~~~~E~~alGAA~lA~~a~G~~~~~~e~~~~~--~~~~~~~ 471 (526)
T 3ezw_A 402 R--------LHALRVDGGAVANNFLMQFQSDILGTRVERPEVREVTALGAAYLAGLAVGFWQNLDELQEKA--VIEREFR 471 (526)
T ss_dssp C--------CSEEEEESGGGGCHHHHHHHHHHHTSEEEEESCCCHHHHHHHHHHHHHTTSSSCGGGSTTCC--CEEEEEC
T ss_pred C--------CCEEEEECchhhCHHHHHHHHHHHCCEEEeCCCCchHHHHHHHHHHHHhCCCCCHHHHHHhc--CCCeEEc
Confidence 8 99999999999999999999999999999999999999999999999999999999985554 5688999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHhcccccc
Q 046958 388 PLLNEEFRKKKAESQCRAVERTFNLADLS 416 (417)
Q Consensus 388 P~~~~~~~y~~y~~~~~~~~~~~~~~~~~ 416 (417)
|+++++++|++|++|++++++.++|...+
T Consensus 472 P~~~~~~~~~~y~~w~~av~r~~~w~~~~ 500 (526)
T 3ezw_A 472 PGIETTERNYRYAGWKKAVKRAMAWEEHD 500 (526)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHHSSCSCCC
T ss_pred CCCCHHHHHHHHHHHHHHHHHHhCchHHH
Confidence 99999998999999999999999887653
No 9
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=100.00 E-value=2.8e-72 Score=583.30 Aligned_cols=378 Identities=33% Similarity=0.508 Sum_probs=332.8
Q ss_pred ccccC-CcccccccccCCcccHHHHHhhh----------hhccccccccchHHHHhhhhcCCCcccccccceE----Eec
Q 046958 17 NLGFI-FFPLGPSEHWAGFRLVVENRTVQ----------WRSNKMVPVQRIPELTRSRQQTASSEGETLDRTL----MTT 81 (417)
Q Consensus 17 ~~~~~-g~pl~p~i~W~D~R~~~~~~~~~----------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~----~~~ 81 (417)
.+|.+ |+|++|+|+|+|.|+.++++++. +||.++++.++++||+|+++|+|+ +++++.+ |++
T Consensus 90 ~~D~~~G~~l~~~i~w~D~r~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~---~~~~~~~~~~~~~~ 166 (503)
T 2w40_A 90 IWDRITGKPLYNAIVWLDTRVEELVTEFSAKYNNNDIQKKTGTYFNTYFSAFKILWLIQNNPE---IKQKIDDGTAVIGN 166 (503)
T ss_dssp EEETTTCCBSSCEECTTCCTTHHHHHHHHHHSCHHHHHHHHSSCCCSSSHHHHHHHHHHHCHH---HHHHHHTTCEEEEE
T ss_pred EEECCCCcCCccceeecccCcHHHHHHHHhccchHHHHHHhCCCCCcccHHHHHHHHHHhChH---HHHHHhcCCeEEEC
Confidence 46776 99999999999999999877653 579999999999999999999997 7888776 999
Q ss_pred hhhHHHHHHhCCCCCceEEechhhhhhcccccCCCCCCCHHHHHhcCCC-CCCCCCccccCcceeeeccCCCCC--CCcE
Q 046958 82 IDTWLIWSLTGGVNGDLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIP-AEIRPKIVSNSEIIGKIGKGCPIT--GIPI 158 (417)
Q Consensus 82 ~~dyi~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~-~~~LP~i~~~~~~~G~v~~g~l~~--g~pV 158 (417)
++|||.|+|||+ ++++|+|+||+|++||+++++||+++|+.+||+ .++||+|+++++++|++++..+.+ |+||
T Consensus 167 ~~d~l~~~LTG~----~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~~lP~i~~~~~~~G~~~~~~~g~~~g~pV 242 (503)
T 2w40_A 167 INTWLIFNLTKG----NCYTDVTNASRTLLMDINTLQWDEKMCKIFNITNMSVLPEIKSNCSNFGLVKSEHVPDYLNIPI 242 (503)
T ss_dssp HHHHHHHHHHTS----CCEEEHHHHTTTTCBCTTTCSBCHHHHHHTTCCCGGGSCEEECSEEEEEECCCTTSGGGTTCEE
T ss_pred HHHHHHHHHcCC----CccccHHHhhhhcCccCCCCccCHHHHHHcCCChHHHCCCccCCcCceeeccHHHcCCCCCceE
Confidence 999999999992 499999999999999999999999999999999 999999999999999998642235 8999
Q ss_pred EeccchHHHhHhcCcC-CCCceEEeccCcceeeeecCcceeccCCCceeeeceecCC-----------CCCchhhhh---
Q 046958 159 SGCLGNQHAAMLGQAC-KKGEAKSTYGTGAFIRLNTGEEVVKSKHGLLSTLAFKLGP-----------KAPTNYALE--- 223 (417)
Q Consensus 159 ~~g~~D~~aa~lg~g~-~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~~~~~~~~g~-----------~~~~~~~l~--- 223 (417)
++|++|++|+++|+++ ++|++++++|||+++.++++++|..++.+.+..++|..++ ...++..++
T Consensus 243 ~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~g~~~~w~~ 322 (503)
T 2w40_A 243 TGCIGDQQSACIGQAIFDEGEAKCTYGTGVFLLINTGEKVVYSTCGLITTICYKFNDNDKPKYALEGSIGTAGSGVSWLL 322 (503)
T ss_dssp EEEEEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEECCSTTSCCEEEEEEEESCSHHHHHHHH
T ss_pred EEECchHHHHHHhCCCCCCCcEEEEechhheeeeecCCccccCCCCceeEEEeecCCCCCceEEEechhhhhHhHHHHHH
Confidence 9999999999999999 9999999999999998877545666656666666665421 001122222
Q ss_pred hhcCCCCcHHHHHHHHHhcCCCCCeEEccccCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046958 224 DSLGIISNASEIEELALRVNSTGGIYFVRAFNGLLAPWWRDDARSVCIGITRFTSKAHFARAVLESMCFLVKDVLDSKQK 303 (417)
Q Consensus 224 ~~~~~~~~~~~l~~~a~~~~~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~ 303 (417)
+ ++..++|++++++++++++++|++|+|||.|+|+|+||+++||+|+||+..|+++|++||++|||||++|++++.|++
T Consensus 323 ~-~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~ 401 (503)
T 2w40_A 323 K-NKLIDDPSEASDIMEKCENTTGVIFVPAFSGLYAPRWRSDARASIYGMTFNTERSHIVRALLEGIAFQLNEIVDSLTS 401 (503)
T ss_dssp H-TTSSSCGGGHHHHHHHCCSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred H-hCCcCCHHHHHHHHhhCCCCCCEEEecCCCCCCCCCCCCCCcEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 665567899999998888889999999999999999999999999999999999999999999999999999999987
Q ss_pred hccccccccCCCCC-ceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHHHHHHHHHHhcCCCCCHHHHHhccccCC
Q 046958 304 DAVEKGVIKDAKPE-FVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTALGAAFAAGLAIGVFKEEEIFASSERTKT 382 (417)
Q Consensus 304 ~~g~~~~~~~~~~~-~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~salGaAllA~~~~G~~~~~~~~~~~~~~~~ 382 (417)
..|.+ + ++|+++||++||++|+|++||++|+||+++...|++|+|||++|+.++|.++|++++.+.+. +.
T Consensus 402 ~~g~~--------~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~~~~e~~alGaA~la~~~~G~~~~~~~~~~~~~-~~ 472 (503)
T 2w40_A 402 DMGIE--------MLHVLRCDGGMTKNKPFMQFNSDIINTKIEVSKYKEVTSLGAAVLAGLEVKIWDSLDSVKSLLR-RS 472 (503)
T ss_dssp HHTCS--------CCSCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTCSSCHHHHHHHHT-CE
T ss_pred hcCCC--------ccceEEEeCccccCHHHHHHHHHHHCCeEEecCCCcchHHHHHHHHHHHhCccCCHHHHHHhcc-CC
Confidence 56776 7 89999999999999999999999999999999999999999999999999999999877653 56
Q ss_pred CcEEeCCCCHHHHH-HHHHHHHHHHHHHhcc
Q 046958 383 STTFKPLLNEEFRK-KKAESQCRAVERTFNL 412 (417)
Q Consensus 383 ~~~~~P~~~~~~~y-~~y~~~~~~~~~~~~~ 412 (417)
.++|+|++++ +.| ++|++|+++|++.++|
T Consensus 473 ~~~~~P~~~~-~~y~~~y~~~~~~~~~~~~~ 502 (503)
T 2w40_A 473 DAVFHSKMDD-KKRKKKTSEWNKAVERTLIQ 502 (503)
T ss_dssp EEEECCCSCH-HHHHHHHHHHHHHHHHHHCC
T ss_pred CcEEccCCCH-HHHHHHHHHHHHHHHHHhhc
Confidence 7899999998 878 5899999999998765
No 10
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=100.00 E-value=3.1e-72 Score=583.07 Aligned_cols=382 Identities=39% Similarity=0.621 Sum_probs=334.8
Q ss_pred ccccC-CcccccccccCCcccHHHHHhhh----------hhccccccccchHHHHhhhhcCCCcccccccceE----Eec
Q 046958 17 NLGFI-FFPLGPSEHWAGFRLVVENRTVQ----------WRSNKMVPVQRIPELTRSRQQTASSEGETLDRTL----MTT 81 (417)
Q Consensus 17 ~~~~~-g~pl~p~i~W~D~R~~~~~~~~~----------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~----~~~ 81 (417)
.+|.+ |+|++|+|+|+|.|+.++++++. +||.++++.++++||+|+++|+|+ +++++.+ |++
T Consensus 86 ~vD~~~G~~l~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~---~~~~~~~~~~~~~~ 162 (504)
T 2d4w_A 86 VWDKTTGKPVYNAIVWQDTRTQKIVDELGGDEGAEKYKSIVGLPLATYFSGPKIKWILDNVEG---AREKAEKGDLLFGN 162 (504)
T ss_dssp EEETTTCCBSSCEECTTCCTTHHHHHHHHCSSCGGGGHHHHSCCSCTTSHHHHHHHHHHHSTT---HHHHHHHTCEEEEC
T ss_pred EEECCCCCCccccceecccChHHHHHHHHhhcchHHHHHHhCCCCCchhHHHHHHHHHHcChh---HHHHHhcCCeEEec
Confidence 46776 99999999999999999877653 469999999999999999999997 7788776 999
Q ss_pred hhhHHHHHHhCCCCCce---EEechhhhhhcccccCCCCCCCHHHHHhcCCCCCCCCCccccCcceeeecc-CCCCCCCc
Q 046958 82 IDTWLIWSLTGGVNGDL---HVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEIRPKIVSNSEIIGKIGK-GCPITGIP 157 (417)
Q Consensus 82 ~~dyi~~~LTG~~~~~~---~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~-g~l~~g~p 157 (417)
++|||.|+|||+ .+ +++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|.+++ ..+.+ +|
T Consensus 163 ~~d~l~~~LTG~---~~~~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~~~~~~~G~-~p 238 (504)
T 2d4w_A 163 TDTWVLWNMTGG---TEGGVHVTDVTNASRTMLMDLDTLSWREDIAADMGIPLSMLPDIRSSSEVYGHGRPRGLVPG-VP 238 (504)
T ss_dssp HHHHHHHHHTTT---TTTCCCEEEHHHHTTTTCEETTTTEECHHHHHHTTCCGGGSCEEECSEEEEEECCTTSSSTT-CE
T ss_pred HHHHHHHHhcCC---CcCCceeeehhhhhhhcCccCCCCccCHHHHHHhCCCHHHCCCccCCccceeccchHHhCCC-Ce
Confidence 999999999993 14 899999999999999999999999999999999999999999999999986 32335 99
Q ss_pred EEeccchHHHhHhcCcC-CCCceEEeccCcceeeeecCcceeccCCCceeeeceecCC----------CCCchhhhh---
Q 046958 158 ISGCLGNQHAAMLGQAC-KKGEAKSTYGTGAFIRLNTGEEVVKSKHGLLSTLAFKLGP----------KAPTNYALE--- 223 (417)
Q Consensus 158 V~~g~~D~~aa~lg~g~-~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~~~~~~~~g~----------~~~~~~~l~--- 223 (417)
|++|++|++|+++|+++ ++|++++++|||+++.++++++|..++.+.+.+++|..++ ...++..++
T Consensus 239 V~~g~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~W~~ 318 (504)
T 2d4w_A 239 IAGILGDQQAATFGQACFEVGQAKNTYGTGNFLLLNTGTEKVMSKNGLLTTVCYKIGDAPAVYALEGSIAVTGSLVQWLR 318 (504)
T ss_dssp EEEEEEHHHHHHHHTTCCSTTEEEEEESSSEEEEEECTTSCCCCSSSCEEEEEECCTTSCCEEEEEEEESCSHHHHHHHH
T ss_pred EEEECCcHHHHHhhCCCCCCCcEEEEcchhheeeeecCCccccCCCCcEEEEEEEcCCCCceEEEcchhhhHHHHHHHHH
Confidence 99999999999999999 9999999999999998877545666666776666665421 011112222
Q ss_pred hhcCCCCcHHHHHHHHHhcCCCCCeEEccccCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Q 046958 224 DSLGIISNASEIEELALRVNSTGGIYFVRAFNGLLAPWWRDDARSVCIGITRFTSKAHFARAVLESMCFLVKDVLDSKQK 303 (417)
Q Consensus 224 ~~~~~~~~~~~l~~~a~~~~~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~ 303 (417)
+.++...+|++++++++++++++|++|+|||.|+|+|+||+++||.|+||+..|+++||+||++||+||++|++++.|++
T Consensus 319 ~~~~~~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~ 398 (504)
T 2d4w_A 319 DNLGMFEDAPDVEWLAGKVQDNGGAYFVPAFSGLFAPYWRPDARGALVGLTRYVNRNHIARAALEATAFQSREVVDAMNA 398 (504)
T ss_dssp HTTCTTTTCSCTHHHHTTSSSCTTCEEECTTCCCSTTTCCCCSCEEEEEECSSCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCHHHHHHHHhhCCCCCCEEEecCCCCCCCCCCCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45555556788999888888889999999999999999999999999999999999999999999999999999999987
Q ss_pred hccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHHHHHHHHHHhcCCCCCHHHHHhccccCCC
Q 046958 304 DAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTALGAAFAAGLAIGVFKEEEIFASSERTKTS 383 (417)
Q Consensus 304 ~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~salGaAllA~~~~G~~~~~~~~~~~~~~~~~ 383 (417)
..|.+ +++|+++||++||++|+|++||++|+||+++...|++|+|||++|+.++|.++|++++. ++. +..
T Consensus 399 ~~g~~--------~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA~~~~G~~~~~~~~~-~~~-~~~ 468 (504)
T 2d4w_A 399 DSGVD--------LTELRVDGGMVANELLMQFQADQLGVDVVRPKVAETTALGAAYAAGIAVGFWKGEQDVI-DNW-AED 468 (504)
T ss_dssp HHSCC--------CCEEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHHTSSCSHHHHH-HHC-CEE
T ss_pred hcCCC--------cceEEEeCCcccCHHHHHHHHHHhCCeEEeCCCCcchHHHHHHHHHhhcCccCCHHHHH-hhc-CCC
Confidence 66877 89999999999999999999999999999999999999999999999999999999985 442 567
Q ss_pred cEEeCCCCHHHHH-HHHHHHHHHHHHHhcccccc
Q 046958 384 TTFKPLLNEEFRK-KKAESQCRAVERTFNLADLS 416 (417)
Q Consensus 384 ~~~~P~~~~~~~y-~~y~~~~~~~~~~~~~~~~~ 416 (417)
++|+|++++ +.| ++|++|+++|++.++|.+++
T Consensus 469 ~~~~P~~~~-~~y~~~y~~~~~~~~~~~~~~~~~ 501 (504)
T 2d4w_A 469 KRWSPSMES-GERERLYRNWKKAVTKTMEWVDED 501 (504)
T ss_dssp EEECCCSCH-HHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred eEEccCCCH-HHHHHHHHHHHHHHHHHhccchhh
Confidence 899999998 778 58999999999999987765
No 11
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=100.00 E-value=8.3e-72 Score=578.71 Aligned_cols=380 Identities=40% Similarity=0.576 Sum_probs=332.7
Q ss_pred ccccC-CcccccccccCCcccHHHHHhhh----------hhccccccccchHHHHhhhhcCCCcccccccceE----Eec
Q 046958 17 NLGFI-FFPLGPSEHWAGFRLVVENRTVQ----------WRSNKMVPVQRIPELTRSRQQTASSEGETLDRTL----MTT 81 (417)
Q Consensus 17 ~~~~~-g~pl~p~i~W~D~R~~~~~~~~~----------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~----~~~ 81 (417)
.+|.+ |+|++|+|+|+|.|+.++++++. +||.++++.++++||+|+++|+|+ +++++.+ |++
T Consensus 86 ~vD~~~G~~l~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~---~~~~~~~~~~~~~~ 162 (495)
T 2dpn_A 86 LWDRKTGKPLHNAIVWQDRRTTPLCEALRAKGLEPLFRERTGLLFDPYFSGTKLVWLLENVPG---LKARAEGGGVAFGT 162 (495)
T ss_dssp EEETTTCCBSSCEECTTCCTTHHHHHHHHHTTCHHHHHHHTSCCSCTTSHHHHHHHHHHHSSS---HHHHHHHTCEEEEC
T ss_pred EEECCCCcCCccceeecccChHHHHHHHHhccchhHHHHHhCCCCCchhHHHHHHHHHHcCHH---HHHHHhcCCcEEEC
Confidence 46766 99999999999999999877653 479999999999999999999997 7788766 999
Q ss_pred hhhHHHHHHhCCCCCceEEechhhhhhcccccCCCCCCCHHHHHhcCCCCCCCCCccccCcceeeeccCCCCCCCcEEec
Q 046958 82 IDTWLIWSLTGGVNGDLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEIRPKIVSNSEIIGKIGKGCPITGIPISGC 161 (417)
Q Consensus 82 ~~dyi~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~g~l~~g~pV~~g 161 (417)
++|||.|+|||+ .++++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|++++..+.+|+||++|
T Consensus 163 ~~d~l~~~LTG~---~~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~~~~~~G~g~pV~~g 239 (495)
T 2dpn_A 163 VDTWLIWNLTGG---KVHATDPTNASRTLLFNLHTLAWDPELLEALGIPAALLPEVRPSDGDFGETLPELLGAPVPIRGV 239 (495)
T ss_dssp HHHHHHHHHTTT---SCCEECHHHHTTSSSEETTTTEECHHHHHHTTCCSTTCCEECCTTSCCCBCCHHHHSSCCBEEEE
T ss_pred HHHHHHHHhcCC---CeEEEehHHhHhhcCccCccCCcCHHHHHHcCCCHHHCCCccCCCCeeEeccHHHcCCCCeEEEE
Confidence 999999999994 25899999999999999999999999999999999999999999999999974212279999999
Q ss_pred cchHHHhHhcCcC-CCCceEEeccCcceeeeecCcceeccCCCceeeeceecCC---------CCCchhhhh---hhcCC
Q 046958 162 LGNQHAAMLGQAC-KKGEAKSTYGTGAFIRLNTGEEVVKSKHGLLSTLAFKLGP---------KAPTNYALE---DSLGI 228 (417)
Q Consensus 162 ~~D~~aa~lg~g~-~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~~~~~~~~g~---------~~~~~~~l~---~~~~~ 228 (417)
++|++|+++|+++ ++|++++++|||+++.+.++++|..++.+.+..++|..+. ...++..++ + ++.
T Consensus 240 ~~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~~w~~~-~~~ 318 (495)
T 2dpn_A 240 LGDQQAALFGQAALGGGEGKCTYGTGAFLLLNTGKRPVLSEKGLLATVAWSLGGRATYALEGSLFVAGAAVGWLKE-VGL 318 (495)
T ss_dssp EEHHHHHHHHTTCCSTTCEEEEESSSEEEEEECTTSCCCCSSSCEEEEEEEETTEEEEEEEEEESCSHHHHHHHHH-TTS
T ss_pred CcHHHHHHHhCCCCCCCcEEEEccHhhhhhhhcCCccccCCCCceEEEEEEcCCCCEEEEechHHhHHHHHHHHHH-cCC
Confidence 9999999999999 9999999999999998877545666656666556655421 011122222 4 665
Q ss_pred CCcHHHHHHHHHhcCCCCCeEEccccCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccc
Q 046958 229 ISNASEIEELALRVNSTGGIYFVRAFNGLLAPWWRDDARSVCIGITRFTSKAHFARAVLESMCFLVKDVLDSKQKDAVEK 308 (417)
Q Consensus 229 ~~~~~~l~~~a~~~~~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~ 308 (417)
.++|++++++++++++++|++|+|||.|+|+|+||+++||.|+||+..|+++||+||++||+||+++++++.|++..|.+
T Consensus 319 ~~~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~~~rAvlEgia~~~~~~~~~l~~~~g~~ 398 (495)
T 2dpn_A 319 IRESAEVEALAASVEDTGDVYFVPAFTGLGAPYWDPYARGTLLGLTRGTSRAHLARAALEGVAFQVRDVVLAMEEEAGVR 398 (495)
T ss_dssp SSSTTTHHHHHHTCSCCSSCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTTSCC
T ss_pred ccCHHHHHHHHhhCCCCCcEEEecCCCCCCCCCCCCCCceEEEecCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 56788999999888888999999999999999999999999999999999999999999999999999999998756777
Q ss_pred ccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHHHHHHHHHHhcCCCCCHHHHHhccccCCCcEEeC
Q 046958 309 GVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTALGAAFAAGLAIGVFKEEEIFASSERTKTSTTFKP 388 (417)
Q Consensus 309 ~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~salGaAllA~~~~G~~~~~~~~~~~~~~~~~~~~~P 388 (417)
+++|+++||++||++|+|++||++|+||+++...|++|+|||++|+.++|.+ |++++. ++ ....++|+|
T Consensus 399 --------~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~~~~e~~alGaA~la~~a~G~~-~~~~~~-~~-~~~~~~~~P 467 (495)
T 2dpn_A 399 --------LKVLKADGGMAQNRLFLKIQADLLGVPVAVPEVTETTALGAALMAGVGAGAL-SPEDVA-GR-FREAERFLP 467 (495)
T ss_dssp --------CCCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHHTSC-CHHHHH-HH-CCEEEEECC
T ss_pred --------CcEEEEecccccCHHHHHHHHHHhCCeeEecCCcccHHHHHHHHHHhhcCcC-CHHHHH-Hh-cCCCeEEcc
Confidence 8899999999999999999999999999999999999999999999999999 999984 44 256789999
Q ss_pred CCCHHHHH-HHHHHHHHHHHHHhccccc
Q 046958 389 LLNEEFRK-KKAESQCRAVERTFNLADL 415 (417)
Q Consensus 389 ~~~~~~~y-~~y~~~~~~~~~~~~~~~~ 415 (417)
+++. +.| ++|++|++++++.++|..+
T Consensus 468 ~~~~-~~y~~~~~~~~~~~~~~~~~~~~ 494 (495)
T 2dpn_A 468 TMPE-GRREALYRRWREAVERAKGWARE 494 (495)
T ss_dssp CSCH-HHHHHHHHHHHHHHHHHSSCSCC
T ss_pred CCCH-HHHHHHHHHHHHHHHHHhhhhhc
Confidence 9998 777 5899999999999998654
No 12
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.7e-71 Score=576.68 Aligned_cols=376 Identities=40% Similarity=0.552 Sum_probs=330.5
Q ss_pred ccccCCcccccccccCCcccHHHHHhhh---------hhccccccccchHHHHhhhhcCCCcccccccceE----Eechh
Q 046958 17 NLGFIFFPLGPSEHWAGFRLVVENRTVQ---------WRSNKMVPVQRIPELTRSRQQTASSEGETLDRTL----MTTID 83 (417)
Q Consensus 17 ~~~~~g~pl~p~i~W~D~R~~~~~~~~~---------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~----~~~~~ 83 (417)
.+|.+|+|++|+|+|+|.|+.++++++. ++|.++++.++++||+|+++|+|+ +++++.+ |++++
T Consensus 87 ~~D~~G~~l~~~i~w~D~R~~~~~~~l~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~p~---~~~~~~~~~~~~~~~~ 163 (497)
T 2zf5_O 87 VWDKDGKPLYNAIVWQCRRTAEMVEEIKREYGTMIKEKTGLVPDAYFSASKLKWLLDNVPG---LREKAEKGEVMFGTVD 163 (497)
T ss_dssp EECTTCCBSSCEECTTCCTTHHHHHHHHHHHHHHHHHHHSSCCCTTSHHHHHHHHHHHSTT---HHHHHHTTCCEEEEHH
T ss_pred EECCCCCCcccceeecccCcHHHHHHHHhhhHHHHHHHhCCCCCchhHHHHHHHHHHcCHH---HHHHHhcCCCEEEcHH
Confidence 4677899999999999999999876552 479999999999999999999997 6777766 89999
Q ss_pred hHHHHHHhCCCCCceEEechhhhhhcccccCCCCCCCHHHHHhcCCCCCCCCCccccCcceeeeccCCCCCCCcEEeccc
Q 046958 84 TWLIWSLTGGVNGDLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEIRPKIVSNSEIIGKIGKGCPITGIPISGCLG 163 (417)
Q Consensus 84 dyi~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~g~l~~g~pV~~g~~ 163 (417)
|||.|+||| ++++|+|+||+|++||+++++||+++|+.+||+.++||+|+++++++|++++..+.+|+||++|++
T Consensus 164 d~l~~~LTG-----~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~~~~~~g~g~pV~~g~~ 238 (497)
T 2zf5_O 164 TFLIYRLTG-----EHVTDYSNASRTMLFNIKKLDWDDELLELFDIPESVLPEVRESSEVYGYTKKELLGAEIPVSGDAG 238 (497)
T ss_dssp HHHHHHHHS-----CCEEEHHHHTTSSSEETTTTEECHHHHHHTTCCGGGCCEEECSEEEEEECCHHHHSSCCEEEEEEE
T ss_pred HHHHHHHhC-----CeeeeHHHhhhhcCccCCCCCcCHHHHHHcCcCHHHCCCcCCCCCeeeecCHHHcCCCCeEEEEcc
Confidence 999999999 999999999999999999999999999999999999999999999999997521227999999999
Q ss_pred hHHHhHhcCcC-CCCceEEeccCcceeeeecCcceeccCCCceeeeceecCC---------CCCchhhhh---hhcCCCC
Q 046958 164 NQHAAMLGQAC-KKGEAKSTYGTGAFIRLNTGEEVVKSKHGLLSTLAFKLGP---------KAPTNYALE---DSLGIIS 230 (417)
Q Consensus 164 D~~aa~lg~g~-~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~~~~~~~~g~---------~~~~~~~l~---~~~~~~~ 230 (417)
|++|+++|+++ ++|++++++|||+++.+.++ +|..++.+.+..++|..+. ...++..++ +.++...
T Consensus 239 D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~w~~~~~~~~~ 317 (497)
T 2zf5_O 239 DQQAALFGQAAFEAGMVKATYGTGSFILVNTD-KMVLYSDNLLTTIAWGLNGRVSYALEGSIFVTGAAVQWLRDGIKIIK 317 (497)
T ss_dssp HHHHHHHHTTCCSTTCEEEEESSSEEEEEEEE-TCCCCCTTSEEEEEEEETTEEEEEEEEEESCSHHHHHHHHHTSCCCS
T ss_pred HHHHHHHhCCCCCCCcEEEEcchhheeeEECC-CCccCCCCcEEEEEEEcCCCCEEEEechhhhHHHHHHHHHHHhCCCC
Confidence 99999999999 99999999999999988775 4665555666556655421 011122222 4565556
Q ss_pred cHHHHHHHHHhcCCCCCeEEccccCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 046958 231 NASEIEELALRVNSTGGIYFVRAFNGLLAPWWRDDARSVCIGITRFTSKAHFARAVLESMCFLVKDVLDSKQKDAVEKGV 310 (417)
Q Consensus 231 ~~~~l~~~a~~~~~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~ 310 (417)
+|++++++++++|++++++|+|||.|+|+|+||+++||.|+||+..|+++|++||++||+||+++++++.|++. + +
T Consensus 318 ~~~~l~~~a~~~~~~~gl~~~P~~~G~r~P~~d~~arg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~l~~l~~~-~-~-- 393 (497)
T 2zf5_O 318 HASETEELATKLESNEGVYFVPAFVGLGAPYWDQFARGIIIGITRGTGREHLARATLEAIAYLTRDVVDEMEKL-V-Q-- 393 (497)
T ss_dssp CGGGHHHHHTTSSSCTTCEEECCTTCBCTTTCBTTCCEEEEEECTTCCHHHHHHHHHHHHHHHHHHHHHHHTTT-S-C--
T ss_pred cHHHHHHHHhhCCCCCceEEecCcCCCCCCCCCCCCCEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhc-C-C--
Confidence 78899998888888899999999999999999999999999999999999999999999999999999999873 5 6
Q ss_pred ccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHHHHHHHHHHhcCCCCCHHHHHhccccCCCcEEeCCC
Q 046958 311 IKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTALGAAFAAGLAIGVFKEEEIFASSERTKTSTTFKPLL 390 (417)
Q Consensus 311 ~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~salGaAllA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~ 390 (417)
+++|+++||++||++|+|++||++|+||+++...|++|+|||++|+.++|.++|++++. ++ .+..++|+|++
T Consensus 394 ------~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~alGaA~lA~~~~g~~~~~~~~~-~~-~~~~~~~~P~~ 465 (497)
T 2zf5_O 394 ------IKELRVDGGATANDFLMQFQADILNRKVIRPVVKETTALGAAYLAGLAVDYWADTREIA-EL-WKAERIFEPKM 465 (497)
T ss_dssp ------CCCEEEESGGGGCHHHHHHHHHHHTSCEEEESCSCHHHHHHHHHHHHHTTSSCCHHHHH-TT-CCEEEEECCCC
T ss_pred ------cceEEEeCccccCHHHHHHHHhhcCCeEEEcCCCcchHHHHHHHHHHHhCccCCHHHHH-Hh-cCCCeEECCCc
Confidence 89999999999999999999999999999999999999999999999999999999984 44 25678999999
Q ss_pred CHHHHH-HHHHHHHHHHHHHhcccc
Q 046958 391 NEEFRK-KKAESQCRAVERTFNLAD 414 (417)
Q Consensus 391 ~~~~~y-~~y~~~~~~~~~~~~~~~ 414 (417)
+. +.| ++|++|+++|+++++|..
T Consensus 466 ~~-~~y~~~y~~~~~~~~~~~~~~~ 489 (497)
T 2zf5_O 466 DE-KTRERLYKGWKEAVKRAMGWAK 489 (497)
T ss_dssp CH-HHHHHHHHHHHHHHHTTTTGGG
T ss_pred cH-HHHHHHHHHHHHHHHHHHhHhh
Confidence 98 777 589999999999998854
No 13
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=100.00 E-value=3.3e-71 Score=572.81 Aligned_cols=373 Identities=20% Similarity=0.239 Sum_probs=318.0
Q ss_pred ccccCCcccccccccCCcccHHHHHhhh--------hhccccccccchHHHHhhhhcCCCcccccccceEEechhhHHHH
Q 046958 17 NLGFIFFPLGPSEHWAGFRLVVENRTVQ--------WRSNKMVPVQRIPELTRSRQQTASSEGETLDRTLMTTIDTWLIW 88 (417)
Q Consensus 17 ~~~~~g~pl~p~i~W~D~R~~~~~~~~~--------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~dyi~~ 88 (417)
.+|.+|+|++|+|+|+|.|+.++++++. +||.++++.++++||+|+++|+|+ +++++.+++.++|||.|
T Consensus 82 ~~D~~G~~l~~~i~w~D~R~~~~~~~l~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~P~---~~~~~~~~l~~~d~l~~ 158 (484)
T 2itm_A 82 LLDAQQRVLRPAILWNDGRCAQECTLLEARVPQSRVITGNLMMPGFTAPKLLWVQRHEPE---IFRQIDKVLLPKDYLRL 158 (484)
T ss_dssp EECTTCCBCSCEECTTCCTTHHHHHHHHHHCTTHHHHHSSCCCTTSHHHHHHHHHHHCHH---HHTTCCEEECHHHHHHH
T ss_pred EECCCcCCCcccceecccCcHHHHHHHHHhHHHHHHHhCCCCCcccHHHHHHHHHHhChH---HHHHHhheeCcHHHHHH
Confidence 5677899999999999999999987763 479999999999999999999997 78999999999999999
Q ss_pred HHhCCCCCceEEechhhhhhcccccCCCCCCCHHHHHhcCCCCCCCCCccccCcceeeecc------CCCCCCCcEEecc
Q 046958 89 SLTGGVNGDLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEIRPKIVSNSEIIGKIGK------GCPITGIPISGCL 162 (417)
Q Consensus 89 ~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~------g~l~~g~pV~~g~ 162 (417)
+||| ++++|+|+||+|++||+++++||+++|+.+||+.++||+|+++++++|++++ | |+ |+||++|+
T Consensus 159 ~LTG-----~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lp~i~~~~~~~G~~~~~~a~~~G-l~-g~pV~~g~ 231 (484)
T 2itm_A 159 RMTG-----EFASDMSDAAGTMWLDVAKRDWSDVMLQACDLSRDQMPALYEGSEITGALLPEVAKAWG-MA-TVPVVAGG 231 (484)
T ss_dssp HHHS-----CCEEEHHHHHTTTCEETTTTEECHHHHHTTTCCGGGSCEEECTTSEEEECCHHHHHHHT-SC-CCEEECCE
T ss_pred HHhC-----CceeeHHHhhccccccCCCCCcCHHHHHHcCCCHHHCCCccCCcceeeccCHHHHHHhC-CC-CCeEEEEc
Confidence 9999 8999999999999999999999999999999999999999999999999974 6 88 99999999
Q ss_pred chHHHhHhcCcC-CCCceEEeccCcceeeeecCcceeccCCCceeeeceecCC-------CCCchhhhh---hhcCCCCc
Q 046958 163 GNQHAAMLGQAC-KKGEAKSTYGTGAFIRLNTGEEVVKSKHGLLSTLAFKLGP-------KAPTNYALE---DSLGIISN 231 (417)
Q Consensus 163 ~D~~aa~lg~g~-~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~~~~~~~~g~-------~~~~~~~l~---~~~~~~~~ 231 (417)
||++|+++|+++ ++|++++++|||+++.+.++ .+..++.+....+++.+++ ...++..++ +.++. .+
T Consensus 232 ~D~~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~G~~~~W~~~~~~~-~~ 309 (484)
T 2itm_A 232 GDNAAGAVGVGMVDANQAMLSLGTSGVYFAVSE-GFLSKPESAVHSFCHALPQRWHLMSVMLSAASCLDWAAKLTGL-SN 309 (484)
T ss_dssp EHHHHHHHHHTCCSTTCEEEEESSSEEEEEECS-SCCCCCSSSCEEEECSSTTCEEEEEEECCHHHHHHHHHHHTTC-CS
T ss_pred hHHHHHHHhCCCCCCCcEEEEccchheeEEecC-CCccCcccceEEeecccCCeeeeeehhhhHHHHHHHHHHhcCc-cc
Confidence 999999999999 99999999999998877664 4444333333334332210 011111222 44543 46
Q ss_pred HHHHHHHHHhc-CCCCCeEEccccCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc
Q 046958 232 ASEIEELALRV-NSTGGIYFVRAFNGLLAPWWRDDARSVCIGITRFTSKAHFARAVLESMCFLVKDVLDSKQKDAVEKGV 310 (417)
Q Consensus 232 ~~~l~~~a~~~-~~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~ 310 (417)
|+++++++.+. +++++++|+|||.|||+|+||+++||.|+|++..|+++|++||++||+||++|++++.|++ .|.+
T Consensus 310 ~~~~~~~a~~~~~~~~gl~~lP~~~G~r~P~~~~~a~g~~~Gl~~~~~~~~~~rAvlEgia~~~~~~~~~l~~-~g~~-- 386 (484)
T 2itm_A 310 VPALIAAAQQADESAEPVWFLPYLSGERTPHNNPQAKGVFFGLTHQHGPNELARAVLEGVGYALADGMDVVHA-CGIK-- 386 (484)
T ss_dssp HHHHHHHGGGCCTTSCCCEEEEEEC--------CCEEEEEEEEETTCCHHHHHHHHHHHHHHHHHHHHHHHHT-TTCC--
T ss_pred HHHHHHHHhcCCCCCCCeEEeCCCCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC--
Confidence 88888887776 5899999999999999999999999999999999999999999999999999999999987 5777
Q ss_pred ccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCCh-hHHHHHHHHHHhcCCCCCHHHHHhccccCCCcEEeCC
Q 046958 311 IKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIES-TALGAAFAAGLAIGVFKEEEIFASSERTKTSTTFKPL 389 (417)
Q Consensus 311 ~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~-salGaAllA~~~~G~~~~~~~~~~~~~~~~~~~~~P~ 389 (417)
+++|+++||++||++|+|++||++|+||++++..|. +|+|||++|+.++|.++|++++.+.+ ...++|+|+
T Consensus 387 ------~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g~~~~~~~~~~~~--~~~~~~~P~ 458 (484)
T 2itm_A 387 ------PQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANPEKSLIELLPQL--PLEQSHLPD 458 (484)
T ss_dssp ------CSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHHHHHHCTTSCHHHHSCCC--CEEEEECCC
T ss_pred ------cceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHHHHHcCCcCCHHHHHHhc--CCCeEECCC
Confidence 899999999999999999999999999999998885 89999999999999999999986554 467889999
Q ss_pred CCHHHHH-HHHHHHHHHHHHHhcc
Q 046958 390 LNEEFRK-KKAESQCRAVERTFNL 412 (417)
Q Consensus 390 ~~~~~~y-~~y~~~~~~~~~~~~~ 412 (417)
+++++.| ++|++|++++++++++
T Consensus 459 ~~~~~~y~~~y~~~~~~~~~~~~~ 482 (484)
T 2itm_A 459 AQRYAAYQPRRETFRRLYQQLLPL 482 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9988888 5899999999998765
No 14
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=100.00 E-value=4.8e-70 Score=574.41 Aligned_cols=373 Identities=18% Similarity=0.174 Sum_probs=319.2
Q ss_pred ccccCCccccc-----------ccccCCcccHHHHHhhh------------hhccccccccchHHHHhhhhcCCCccccc
Q 046958 17 NLGFIFFPLGP-----------SEHWAGFRLVVENRTVQ------------WRSNKMVPVQRIPELTRSRQQTASSEGET 73 (417)
Q Consensus 17 ~~~~~g~pl~p-----------~i~W~D~R~~~~~~~~~------------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~ 73 (417)
.+|.+|+||+| +|+|+|+|+.++++++. ++|+++++.++++||+|+++|+|+ ++
T Consensus 101 ~~D~~G~pl~~~~~~~~~p~~~ai~W~D~R~~~~~~~l~~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe---~~ 177 (572)
T 3jvp_A 101 PVDEEGQPLCLLAQYKDNPHSWVKLWKHHAAQDKANAINEMAEKRGEAFLPRYGGKISSEWMIAKVWQILDEAED---VY 177 (572)
T ss_dssp EECTTSCBGGGSSSTTSSGGGSEECTTCCTTHHHHHHHHHHHHHHTCTTGGGGTTCCCSSSHHHHHHHHHHHHHH---HH
T ss_pred EECCCCCCCccCccccccccccceecCccchHHHHHHHHHhccccHHHHHHHhCCCCCchhHHHHHHHHHHhCHH---HH
Confidence 45778888888 89999999998876552 578999999999999999999997 89
Q ss_pred ccceEEechhhHHHHHHhCCCCCceEEechhhhhhcccccCCCCCC-CHHHHHhcC-----CCCCCC-CCccccCcceee
Q 046958 74 LDRTLMTTIDTWLIWSLTGGVNGDLHVTDVSNASRTMLMNLKTLDW-DKPTLETLG-----IPAEIR-PKIVSNSEIIGK 146 (417)
Q Consensus 74 ~~~~~~~~~~dyi~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W-~~~ll~~~g-----i~~~~L-P~i~~~~~~~G~ 146 (417)
+++.+|++++|||.|+||| +.++|+|+||+|+||| ++++| |+++|+.+| |+.++| |+|+++++++|.
T Consensus 178 ~~~~~~l~~~dyl~~~LTG-----~~~~d~s~As~t~l~d-~~~~W~~~ell~~~g~~l~~i~~~~L~p~i~~~~~~~G~ 251 (572)
T 3jvp_A 178 NRTDQFLEATDWIVSQMTG-----KIVKNSCTAGYKAIWH-KREGYPSNEFFKALDPRLEHLTTTKLRGDIVPLGERAGG 251 (572)
T ss_dssp HHCSEEEEHHHHHHHHHHS-----SCCEEHHHHHHHSCCB-TTTBSCCHHHHHTTCGGGTTSTTTTTCSCEECTTSEEEE
T ss_pred HHhheEecHHHHHHHHhcC-----CceeehhhccccceeC-CCCCcCCHHHHHHhCcccccCCHhHCCCccCCcCccccc
Confidence 9999999999999999999 8899999999999999 99999 999999998 456677 899999999999
Q ss_pred ecc------CCCCCCCcEEeccchHHHhHhcCcC-CCCceEEeccCcceeeeecCcceeccCCCceeeec-------eec
Q 046958 147 IGK------GCPITGIPISGCLGNQHAAMLGQAC-KKGEAKSTYGTGAFIRLNTGEEVVKSKHGLLSTLA-------FKL 212 (417)
Q Consensus 147 v~~------g~l~~g~pV~~g~~D~~aa~lg~g~-~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~~~~~-------~~~ 212 (417)
|++ | |++|+||++|++|++|+++|+|+ ++|++++++|||+++.++++. +...+ ++...+. |..
T Consensus 252 l~~~~A~~~G-L~~g~pV~~g~~D~~aa~~g~g~~~~g~~~~~~GTs~~~~~~~~~-~~~~~-~~~~~~~~~~~~g~~~~ 328 (572)
T 3jvp_A 252 LLPEMAEKMG-LNPGIAVAVGNVDAHAAVPAVGVTTPGKLVMAMGTSICHMLLGEK-EQEVE-GMCGVVEDGIIPGYLGY 328 (572)
T ss_dssp CCHHHHHHHT-SCTTCEEECCEETTTTHHHHTTCCSSEEEEEEESSSEEEEEEESS-CCCCT-TCSEEEETSSSTTSEEE
T ss_pred cCHHHHHHhC-CCCCCeEEEeCchHHHHHhhCCCCCCCcEEEEecchhheeeecCC-CccCC-CceeeccCccCCCcEEE
Confidence 984 7 99999999999999999999999 999999999999887766642 32221 2221110 110
Q ss_pred -CCCCCchhhhh---hhcCC-----------CCcHHHHHHHHHhc-CCCCCeEEccccCCCCCCCCCCCCceEEEcCCCC
Q 046958 213 -GPKAPTNYALE---DSLGI-----------ISNASEIEELALRV-NSTGGIYFVRAFNGLLAPWWRDDARSVCIGITRF 276 (417)
Q Consensus 213 -g~~~~~~~~l~---~~~~~-----------~~~~~~l~~~a~~~-~~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~~ 276 (417)
+....++..++ +.|.. .+.|++|+++++++ |+++|++|+|||.|||+|+|||++||+|+|++..
T Consensus 329 ~g~~~~~G~~~~W~~~~~~~~~~~~~~~~~g~~~~~~l~~~a~~~~~g~~gl~~lP~~~Ger~P~~d~~arg~~~Gl~~~ 408 (572)
T 3jvp_A 329 EAGQSAVGDIFAWFVKHGVSAATFDEAQEKGVNVHALLEEKASQLRPGESGLLALDWWNGNRSILVDTELSGMLLGYTLQ 408 (572)
T ss_dssp EEEESCSHHHHHHHHHHTSBHHHHHHHHHTTBCHHHHHHHHHTSSCTTSSCCEEECCTTCCCTTTCCSSCCEEEEEECTT
T ss_pred eehhhhHHHHHHHHHHhccchhhHHHHHhcCCCHHHHHHHHHHhCCCCCCCeEeCCccCCCCCCCCCCCcCEEEECCCCC
Confidence 10011111111 33321 13488999999887 4899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCcc-ccHHHHHHHHHhhCCcEEccCCCChhHH
Q 046958 277 TSKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGAT-VNNLLMQIQADLLGSPVLRPADIESTAL 355 (417)
Q Consensus 277 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a-~s~~~~q~~Adv~g~pv~~~~~~e~sal 355 (417)
|+++||+||++|||||++|++++.|++ .|.+ +++|+++||++ ||++|+||+|||+|+||+++...|++|+
T Consensus 409 ~t~~~l~RAvlEgia~~~r~~~~~l~~-~g~~--------~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~~~~e~~al 479 (572)
T 3jvp_A 409 TKPEEIYRALLEATAFGTRAIVDAFHG-RGVE--------VHELYACGGLPQKNHLLMQIFADVTNREIKVAASKQTPAL 479 (572)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHT-TTCC--------EEEEEEESSHHHHCHHHHHHHHHHHTSCEEEBCCSSHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC--------cCEEEEEcCchhhCHHHHHHHHHHHCCeeEecCCCccHHH
Confidence 999999999999999999999999997 6877 89999999999 9999999999999999999999999999
Q ss_pred HHHHHHHHhcC----CCCCHHHHHhccccCCCcEEeCCCCHHHHH-HHHHHHHHHHHHHh
Q 046958 356 GAAFAAGLAIG----VFKEEEIFASSERTKTSTTFKPLLNEEFRK-KKAESQCRAVERTF 410 (417)
Q Consensus 356 GaAllA~~~~G----~~~~~~~~~~~~~~~~~~~~~P~~~~~~~y-~~y~~~~~~~~~~~ 410 (417)
|||++|++++| .|+|++++++.+.....++|+|++++++.| ++|++|+++|+.+.
T Consensus 480 GaA~lA~~a~G~~~~~~~~~~e~~~~~~~~~~~~~~P~~~~~~~Y~~~y~~y~~l~~~l~ 539 (572)
T 3jvp_A 480 GAAMFASVAAGSEVGGYDSIEEAAKKMGRVKDETFKPIPEHVAIYEKLYQEYVTLHDYFG 539 (572)
T ss_dssp HHHHHHHHHHCSSSSSCSCHHHHHHHHCCBCSCCBCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCccccCCHHHHHHHhhccCCeEEeeCHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999 999999998877433458899999999999 58999999999874
No 15
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=100.00 E-value=1.7e-69 Score=568.42 Aligned_cols=374 Identities=16% Similarity=0.202 Sum_probs=315.9
Q ss_pred cccCCccc---------ccccccCCcccHHHHHhhh--------hhccccccccchHHHHhhhhcCCCcccccccceEEe
Q 046958 18 LGFIFFPL---------GPSEHWAGFRLVVENRTVQ--------WRSNKMVPVQRIPELTRSRQQTASSEGETLDRTLMT 80 (417)
Q Consensus 18 ~~~~g~pl---------~p~i~W~D~R~~~~~~~~~--------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~ 80 (417)
+|.+|+|| +|+|+|+|+|+.+++++++ ++|+++++.++++||+|+++|+|+ +++++.+|+
T Consensus 89 ~D~~G~pl~~~~~~~~~~~ai~W~D~Ra~~~~~~l~~~~~~~~~~tG~~~~~~~~~~Kl~Wl~~~~Pe---~~~~~~~~~ 165 (554)
T 3l0q_A 89 LDKEGNPLTVSPSGRNEQNVIVWMDHRAITQAERINATKHPVLEFVGGVISPEMQTPKLLWLKQHMPN---TWSNVGHLF 165 (554)
T ss_dssp EETTSCBCCCSTTCCTTCCEECTTCCTTHHHHHHHHHHTCGGGGGBTTCCCTTSHHHHHHHHHHHCHH---HHHHEEEEE
T ss_pred ECCCCCEeeccCCCCCCCCcEEecccchHHHHHHHHHhHHHHHHHhCCCCChhhHHHHHHHHHHhChH---HHHHhceEE
Confidence 55566666 8999999999999987763 579999999999999999999997 789999999
Q ss_pred chhhHHHHHHhCCCCCceEEechhhhhhccc--ccCCCCCCCHHHHHhcCCCC------CCCC-CccccCccee-eec--
Q 046958 81 TIDTWLIWSLTGGVNGDLHVTDVSNASRTML--MNLKTLDWDKPTLETLGIPA------EIRP-KIVSNSEIIG-KIG-- 148 (417)
Q Consensus 81 ~~~dyi~~~LTG~~~~~~~~~d~s~As~tgl--~d~~~~~W~~~ll~~~gi~~------~~LP-~i~~~~~~~G-~v~-- 148 (417)
+++|||.|+||| +. +.|+||.+++ ||+++++||+++|+.+||+. ++|| +|+++++++| +|+
T Consensus 166 ~~~dyl~~~LTG-----~~--~~s~as~t~~~~~d~~~~~W~~~ll~~~gi~~~~~~~~~~Lp~~i~~~~~~~G~~lt~~ 238 (554)
T 3l0q_A 166 DLPDFLTWRATK-----DE--TRSLCSTVCKWTYLGHEDRWDPSYFKLVGLADLLDNNAAKIGATVKPMGAPLGHGLSQR 238 (554)
T ss_dssp EHHHHHHHHHHS-----CC--CEEHHHHHHHSCCBTTTTBCCHHHHHHHTCGGGGHHHHTTTCSCEECTTCBCTTSSCHH
T ss_pred cHHHHHHHHHhC-----Cc--cccccchhhccccccccCCCCHHHHHHcCCccccchhHHhCCCcccCCcCeeCcccCHH
Confidence 999999999999 54 3566766654 78899999999999999986 2899 6999999999 887
Q ss_pred ----cCCCCCCCcEEeccchHHHhHhcC-cC--CCC-------ceEEeccCcceeeeecCcceeccCCCceeee-cee--
Q 046958 149 ----KGCPITGIPISGCLGNQHAAMLGQ-AC--KKG-------EAKSTYGTGAFIRLNTGEEVVKSKHGLLSTL-AFK-- 211 (417)
Q Consensus 149 ----~g~l~~g~pV~~g~~D~~aa~lg~-g~--~~g-------~~~~s~GTs~~~~~~~~~~~~~~~~g~~~~~-~~~-- 211 (417)
.| |++|+||++|++|++|+++|+ |+ ++| ++++++|||++++.+++ +|..++ +.+..+ ++.
T Consensus 239 ~A~~~G-L~~g~pV~~g~gD~~aa~lg~~G~~~~~G~~~~~~~~~~~~~GTs~~~~~~~~-~~~~~~-~~~~~~~~~~~~ 315 (554)
T 3l0q_A 239 AASEMG-LIPGTAVSVSIIDAHAGTIGILGASGVTGENANFDRRIALIGGTSTAHMAMSR-SAHFIS-GIWGPYYSAILP 315 (554)
T ss_dssp HHHHHT-CCTTCEEBCCEEHHHHHHHHHTTCCCTTSCCCCTTTEEEEECSSSEEEEEEES-SCCCCT-TSEEEEETSSST
T ss_pred HHHHhC-CCCCCeEEEeChHHHhHHhhccccccCCCccccccceEEEEecchheeeeecC-CccccC-CcceeecccccC
Confidence 37 999999999999999999986 55 577 78899999999887775 455543 444322 111
Q ss_pred ----c-CCCCCchhhhh---hhcCC------------CCcHHHHHHHHHhc-CC-------CCCeEEccccCCCCCCCCC
Q 046958 212 ----L-GPKAPTNYALE---DSLGI------------ISNASEIEELALRV-NS-------TGGIYFVRAFNGLLAPWWR 263 (417)
Q Consensus 212 ----~-g~~~~~~~~l~---~~~~~------------~~~~~~l~~~a~~~-~~-------~~gl~flP~l~Ger~P~~~ 263 (417)
. +....++..++ +.++. .+.|+.|++++++. ++ ++|++|+|||.|||+|+||
T Consensus 316 ~~~~~~g~~~~~G~~~~W~~~~~~~~~~~~~~a~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~gl~flP~~~Ger~P~~d 395 (554)
T 3l0q_A 316 EYWLNEGGQSATGALIDHIIQSHPCYPALLEQAKNKGETIYEALNYILRQMAGEPENIAFLTNDIHMLPYFHGNRSPRAN 395 (554)
T ss_dssp TCEEEEEEESCSHHHHHHHHHTSTTHHHHHHHHHHTTCCHHHHHHHHHHHHHSSGGGGGGGGTTCCEECCTTCBCSSSCB
T ss_pred CceEecchhhhhHHHHHHHHHhcccchHHHHHHHhcCCCHHHHHHHHHHhcCCCCCccccccCceEEcccccCCCCCCCC
Confidence 1 10011222222 23321 24588888777765 33 6899999999999999999
Q ss_pred CCCceEEEcCCCCCCHHHH---HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhh
Q 046958 264 DDARSVCIGITRFTSKAHF---ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLL 340 (417)
Q Consensus 264 ~~~rg~~~Gl~~~~~~~~l---~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~ 340 (417)
|++||+|+||+..|+++|| +||++|||||++|++++.|++ .|.+ +++|+++||++||++|+||+|||+
T Consensus 396 ~~arg~~~Gl~~~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~-~g~~--------~~~i~~~GG~aks~~~~Qi~ADv~ 466 (554)
T 3l0q_A 396 PNLTGIITGLKLSTTPEDMALRYLATIQALALGTRHIIETMNQ-NGYN--------IDTMMASGGGTKNPIFVQEHANAT 466 (554)
T ss_dssp TTCCCEECSCCSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHT-TTCC--------CCEEEEESGGGGCHHHHHHHHHHH
T ss_pred CCCcEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC--------CCEEEEeCccccCHHHHHHHHHhh
Confidence 9999999999999999999 899999999999999999988 5877 899999999999999999999999
Q ss_pred CCcEEccCCCChhHHHHHHHHHHhcCCCCCHHHHHhccccCCCcEEeC-CCCHHHHH-HHHHHHHHHHHHHhcccc
Q 046958 341 GSPVLRPADIESTALGAAFAAGLAIGVFKEEEIFASSERTKTSTTFKP-LLNEEFRK-KKAESQCRAVERTFNLAD 414 (417)
Q Consensus 341 g~pv~~~~~~e~salGaAllA~~~~G~~~~~~~~~~~~~~~~~~~~~P-~~~~~~~y-~~y~~~~~~~~~~~~~~~ 414 (417)
|+||++++..|++|+|||++|++++|.++|++++++++. +..++|+| ++++++.| ++|++|+++|+.++++..
T Consensus 467 g~pV~~~~~~e~~alGAA~lA~~a~G~~~~~~~a~~~~~-~~~~~~~P~~~~~~~~Y~~~y~~y~~l~~~~~~~~~ 541 (554)
T 3l0q_A 467 GCAMLLPEESEAMLLGSAMMGTVAAGVFESLPEAMAAMS-RIGKTVTPQTNKIKAYYDRKYRVFHQMYHDHMRYQA 541 (554)
T ss_dssp CCEEEEESCSCHHHHHHHHHHHHHTTSSSSHHHHHHHHC-CEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEecCCCcchHHHHHHHHHHHcCCcCCHHHHHHHhc-CCCcEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999877874 67889999 99999999 589999999999988754
No 16
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=100.00 E-value=1.3e-68 Score=559.65 Aligned_cols=366 Identities=14% Similarity=0.115 Sum_probs=315.3
Q ss_pred CcccccccccCCcccHHHHHhhh-----------hhccccccccchHHHHhhhhcCCCcccccccceEEechhhHHHHHH
Q 046958 22 FFPLGPSEHWAGFRLVVENRTVQ-----------WRSNKMVPVQRIPELTRSRQQTASSEGETLDRTLMTTIDTWLIWSL 90 (417)
Q Consensus 22 g~pl~p~i~W~D~R~~~~~~~~~-----------~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~dyi~~~L 90 (417)
++||+|+|+|+|+|+.++++++. +||+++++.++++||+|+++|+|+ +++++.+|++++|||.|+|
T Consensus 130 ~~pl~~ai~W~D~R~~~~~~~l~~~~~~~~~~~~~tG~~~~~~~~~~kl~wl~~~~Pe---~~~~~~~~~~~~d~l~~~L 206 (538)
T 4bc3_A 130 CFSISDCPVWMDSSTTAQCRQLEAAVGGAQALSCLTGSRAYERFTGNQIAKIYQQNPE---AYSHTERISLVSSFAASLF 206 (538)
T ss_dssp CBSCSEEECTTCCCCHHHHHHHHHHHTSHHHHHHHHSSCCCTTSHHHHHHHHHHHCHH---HHHTEEEEEEHHHHHHHHH
T ss_pred cccccCCcccccCcHHHHHHHHHHhhCcHHHHHHHHCCCCccccHHHHHHHHHHcCHH---HHHHhheEEcHHHHHHHHH
Confidence 35999999999999999876552 579999999999999999999996 8999999999999999999
Q ss_pred hCCCCCceEE-echhhhhhcccccCCCCCCCHHHHHhcCCC-CCCCCCccccCcceeeecc------CCCCCCCcEEecc
Q 046958 91 TGGVNGDLHV-TDVSNASRTMLMNLKTLDWDKPTLETLGIP-AEIRPKIVSNSEIIGKIGK------GCPITGIPISGCL 162 (417)
Q Consensus 91 TG~~~~~~~~-~d~s~As~tgl~d~~~~~W~~~ll~~~gi~-~~~LP~i~~~~~~~G~v~~------g~l~~g~pV~~g~ 162 (417)
|| +.+ +|+|+||+|+|||+++++||+++|+.+|++ .++||+|+++++++|+|++ | |++|+||++|+
T Consensus 207 TG-----~~~~td~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~~LP~i~~~~~~~G~l~~~~a~~~G-l~~g~pV~~g~ 280 (538)
T 4bc3_A 207 LG-----SYSPIDYSDGSGMNLLQIQDKVWSQACLGACAPHLEEKLSPPVPSCSVVGAISSYYVQRYG-FPPGCKVVAFT 280 (538)
T ss_dssp HT-----SCCCCBHHHHTTSSCEETTTTEECHHHHHHHCTTHHHHHCCCBCSSCEEEECCHHHHHHHC-CCTTCEEECCE
T ss_pred hC-----CCcccccchhhcccccccccCCCCHHHHHHhCccHHHHCCCcccccccccccCHHHHHHhC-CCCCCeEEEec
Confidence 99 776 999999999999999999999999999998 7899999999999999985 7 99999999999
Q ss_pred chHHHhHhcCcCCCCceEEeccCcceeeeecCcceeccCCCceeeeceec--------CCCCCchhhhh---hhcCCCCc
Q 046958 163 GNQHAAMLGQACKKGEAKSTYGTGAFIRLNTGEEVVKSKHGLLSTLAFKL--------GPKAPTNYALE---DSLGIISN 231 (417)
Q Consensus 163 ~D~~aa~lg~g~~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~~~~~~~~--------g~~~~~~~~l~---~~~~~~~~ 231 (417)
+|++|+++|++.++|++++++|||+++.++++ +|..++.+. .+++.. +....+...++ +.++ ..+
T Consensus 281 ~D~~aa~~g~~~~~g~~~~s~GTs~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~gg~~~~w~~~~~~-~~~ 356 (538)
T 4bc3_A 281 GDNPASLAGMRLEEGDIAVSLGTSDTLFLWLQ-EPMPALEGH--IFCNPVDSQHYMALLCFKNGSLMREKIRNESV-SRS 356 (538)
T ss_dssp EHHHHHHHHTTCCTTCEEEEESSSEEEEEEES-SCCCCSSSE--EEEETTEEEEEEEEEEESSSHHHHHHHHHHHS-TTC
T ss_pred ccHHhhhhccccCCCcEEEEeccchheEEecC-CCCCCCCcc--eEEeecCCCCEEEeehhhccchHHHHHHHHhc-CCC
Confidence 99999999993399999999999999988875 455555442 233321 10112222222 4454 357
Q ss_pred HHHHHHHHHhcC-CCCCeEEccccCCCCCCCCCCCCceEEE------cCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046958 232 ASEIEELALRVN-STGGIYFVRAFNGLLAPWWRDDARSVCI------GITRFTSKAHFARAVLESMCFLVKDVLDSKQKD 304 (417)
Q Consensus 232 ~~~l~~~a~~~~-~~~gl~flP~l~Ger~P~~~~~~rg~~~------Gl~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~ 304 (417)
|++|++++++++ +++|++|+|||.|||+|+ +||.|+ |++. |+++||+||++|||||++|++++.|++
T Consensus 357 ~~~l~~~a~~~~~g~~gl~~lp~~~Ger~P~----~~G~~~~~~~~~g~~~-~~~~~l~RAvlEgia~~~r~~~~~l~~- 430 (538)
T 4bc3_A 357 WSDFSKALQSTEMGNGGNLGFYFDVMEITPE----IIGRHRFNTENHKVAA-FPGDVEVRALIEGQFMAKRIHAEGLGY- 430 (538)
T ss_dssp HHHHHHHHHTSCTTGGGCEEEEESSCCSSSC----CCEEEEECTTSCEESC-CCHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHhcCCCCCCCeEEeecCCCCcCCC----CCceeeeccccccccC-CCHHHHHHHHHHHHHHHHHHHHHHhhh-
Confidence 999999999885 889999999999999997 456665 2443 899999999999999999999999876
Q ss_pred ccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHHHHHHHHHHhcCC--CCCHHHHHhccccCC
Q 046958 305 AVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTALGAAFAAGLAIGV--FKEEEIFASSERTKT 382 (417)
Q Consensus 305 ~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~salGaAllA~~~~G~--~~~~~~~~~~~~~~~ 382 (417)
.+.+ +++|+++||++||++|+||+|||+|+||+++...|++|+|||++|++++|. ++|++++++.+. +.
T Consensus 431 ~g~~--------~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~e~~alGaA~lA~~a~G~~~~~~~~ea~~~~~-~~ 501 (538)
T 4bc3_A 431 RVMS--------KTKILATGGASHNREILQVLADVFDAPVYVIDTANSACVGSAYRAFHGLAGGTDVPFSEVVKLAP-NP 501 (538)
T ss_dssp CCCT--------TCCEEEEEGGGGCHHHHHHHHHHHTSCEEECCCTTHHHHHHHHHHHHHHHTGGGSCHHHHHTTSC-CC
T ss_pred cCCC--------CCeEEEEcchhcCHHHHHHHHHHhCCceEecCCCCchHHHHHHHHHHHhCcccCCCHHHHHHhhc-CC
Confidence 5666 899999999999999999999999999999999999999999999999998 899999988773 67
Q ss_pred CcEEeCCCCHHHHH-HHHHHHHHHHHHHhccccc
Q 046958 383 STTFKPLLNEEFRK-KKAESQCRAVERTFNLADL 415 (417)
Q Consensus 383 ~~~~~P~~~~~~~y-~~y~~~~~~~~~~~~~~~~ 415 (417)
.++|+|++++++.| ++|++|+++|+++....++
T Consensus 502 ~~~~~P~~~~~~~Y~~~y~~y~~l~~~~~~~~~~ 535 (538)
T 4bc3_A 502 RLAATPSPGASQVYEALLPQYAKLEQRILSQTRG 535 (538)
T ss_dssp EEEECCCTTHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CeeECCCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 88999999999999 5899999999998876554
No 17
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=100.00 E-value=4.7e-67 Score=544.55 Aligned_cols=364 Identities=18% Similarity=0.191 Sum_probs=310.3
Q ss_pred ccccCCcccccccccCCcccHHHHHhh--------------------------hhhccccccccchHHHHhhhhcCCCcc
Q 046958 17 NLGFIFFPLGPSEHWAGFRLVVENRTV--------------------------QWRSNKMVPVQRIPELTRSRQQTASSE 70 (417)
Q Consensus 17 ~~~~~g~pl~p~i~W~D~R~~~~~~~~--------------------------~~~G~~~~~~~~~~kl~wl~~~~p~~~ 70 (417)
.+|.+|+|++|+|+|+|+|+.++++++ ++||+++++.++++||+|+++|+|+
T Consensus 79 ~~D~~G~pl~~~i~W~D~R~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~Pe-- 156 (515)
T 3i8b_A 79 ILDNQGNVIRDAMLWNDTSSAPQAAALIEKLGAAPAQDGEPEDPIARGKQRWVKAVGSSPVASYTLTKVAWVAENEPE-- 156 (515)
T ss_dssp EECTTSCBCSCEECTTCCTTHHHHHHHHHHHHCSCCCTTCCSSHHHHHHHHHHHHHSSCCCTTSHHHHHHHHHHHCHH--
T ss_pred EECCCCCCcCCcceecCCCHHHHHHHHHHhcCcccccccccccccchhHHHHHHHHCCCCCchhHHHHHHHHHHcChH--
Confidence 567889999999999999999875543 2468899999999999999999997
Q ss_pred cccccceEEechhhHHHHHHhCCC--------CCceEEechhhhhhcccccCCCCCCCHHHHHhc-CCC-----------
Q 046958 71 GETLDRTLMTTIDTWLIWSLTGGV--------NGDLHVTDVSNASRTMLMNLKTLDWDKPTLETL-GIP----------- 130 (417)
Q Consensus 71 ~~~~~~~~~~~~~dyi~~~LTG~~--------~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~-gi~----------- 130 (417)
+++++.+|++++|||.|+|||.. ++..+++|+|+||+|+|||+++++||+++|+.+ ||+
T Consensus 157 -~~~~~~~~l~~~dyl~~~LTG~~~~~~~~~~~~~~~~td~s~As~t~l~d~~~~~W~~~ll~~~~gi~~~~~~~~~~~~ 235 (515)
T 3i8b_A 157 -NVKKIAAICLPHDWLSWRIAGYGPVAEGEDAHLEALFTDRSDASGTIYYDAASNEYRRDLIAMVLEAAEGAKAAQSHAE 235 (515)
T ss_dssp -HHTTCSEEECHHHHHHHHHTTCCCCCTTSCCCGGGCEEEHHHHTTSSSEETTTTEECHHHHHHHHHHHHCHHHHHHHHH
T ss_pred -HHHHHheecCHHHHHHHHhcCCCcccccccccccceeecHHHhhcccCeeCCcCccCHHHHHhhcCCCcccccccccch
Confidence 78999999999999999999920 000168999999999999999999999999998 998
Q ss_pred CCCCCCccccCcceeeeccCC-----CCCCCcEEeccchHHHhHhcCcCCCCceEEeccCcceeeeecCcceeccCCCce
Q 046958 131 AEIRPKIVSNSEIIGKIGKGC-----PITGIPISGCLGNQHAAMLGQACKKGEAKSTYGTGAFIRLNTGEEVVKSKHGLL 205 (417)
Q Consensus 131 ~~~LP~i~~~~~~~G~v~~g~-----l~~g~pV~~g~~D~~aa~lg~g~~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~ 205 (417)
.++||+|+++++++|.|++.+ |++|+||++|++|++|+++|+|.++|++++++|||+++..+++ +|..++.+.+
T Consensus 236 ~~~LP~i~~~~~~~G~v~~~~A~~~Gl~~g~pV~~g~~D~~aa~lG~g~~~g~~~~s~GTs~~~~~~~~-~~~~~~~~~~ 314 (515)
T 3i8b_A 236 AIVLPTVLGPRDAAPVKADPAIAGKNVEGGCLLAPGGGDNAMASLGLGMAVGDVSISLGTSGVAAAISE-NPTYDLTGAV 314 (515)
T ss_dssp HSBCCEEECTTCCCSSCCCTTTTTTTSTTCCEECCCEEHHHHHHHHTTCCTTEEEEEESSSEEEEECBS-SCCCCTTSCS
T ss_pred HHHCCCCcCCcCcccCcCHHHHHHhCCCCCCeEEEECchHHHHHhhCCCCCCcEEEEechhhhhhcccC-ccccCCCCcE
Confidence 789999999999999998521 8899999999999999999998888999999999999987664 5666666665
Q ss_pred eeeceecC------CCCCchhhhh---hhcCCCCcHHHHHHHHHhc-CCCCCeEEccccCCCCCCCCCCCCceEEEcCCC
Q 046958 206 STLAFKLG------PKAPTNYALE---DSLGIISNASEIEELALRV-NSTGGIYFVRAFNGLLAPWWRDDARSVCIGITR 275 (417)
Q Consensus 206 ~~~~~~~g------~~~~~~~~l~---~~~~~~~~~~~l~~~a~~~-~~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~ 275 (417)
.++++..| ....+++.++ +.++. +|++++++++++ |+++|++|+|||.|||+|+| +++||.|+||+.
T Consensus 315 ~~~~~~~g~~~~~~~~~~gg~~l~w~~~~~~~--~~~~l~~~a~~~~~g~~gl~~lP~~~Ger~P~~-~~arg~~~Gl~~ 391 (515)
T 3i8b_A 315 SGFADCTGHYLPLACTINGSRILDAGRAALGV--DYDELAKLAFASKPGANGITLVPYFDGERTPNR-PNATATFSGMTL 391 (515)
T ss_dssp EEEECSSSSEEEEEEESCSTHHHHHHHHHHTC--CHHHHHHHHHHSCTTGGGCEEECCTTCBTTTTB-TTCCCEEESCCT
T ss_pred EeeecCCCCEEEeeecccHHHHHHHHHHHhCC--CHHHHHHHHHhCCCCCCCeEEecCCCCCcCCCC-cCcceEEecCCC
Confidence 55543311 1122344443 45664 699999999988 58899999999999999977 999999999999
Q ss_pred CC-CHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhH
Q 046958 276 FT-SKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTA 354 (417)
Q Consensus 276 ~~-~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~sa 354 (417)
.| +++||+||++|||||++|++++.|++ .|.+ +++|+++||++||++|+||+|||+|+||+++...|++|
T Consensus 392 ~~~~~~~l~RAvlEgia~~~r~~l~~l~~-~g~~--------~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~~~e~~a 462 (515)
T 3i8b_A 392 ANTTRENLARAFVEGLLCSQRDCLELIRS-LGAS--------ITRILLIGGGAKSEAIRTLAPSILGMDVTRPATDEYVA 462 (515)
T ss_dssp TTCSHHHHHHHHHHHHHHHHHHHHHHHHH-TTCC--------CCEEEEESGGGGCHHHHHHHHHHHTSCEEEECCCCHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHH-cCCC--------CCEEEEECchhcCHHHHHHHHHHhCCceEecCCcccHH
Confidence 99 99999999999999999999999998 6877 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCHHHHHhccccCCCcEEeCCCCHHHHHHHHHH
Q 046958 355 LGAAFAAGLAIGVFKEEEIFASSERTKTSTTFKPLLNEEFRKKKAES 401 (417)
Q Consensus 355 lGaAllA~~~~G~~~~~~~~~~~~~~~~~~~~~P~~~~~~~y~~y~~ 401 (417)
+|||++|++++|.++++++ +......+|+|+++. +..++|++
T Consensus 463 lGAA~lA~~a~G~~~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~ 504 (515)
T 3i8b_A 463 IGAARQAAWVLSGETEPPA----WQLTIDGVETGEPTE-AVYEAYAK 504 (515)
T ss_dssp HHHHHHHHHHHHCCSSCCC----CCCCEEEEECCCCCH-HHHHHHHH
T ss_pred HHHHHHHHHHcCCCCChhH----hhhhccccCCCCccH-HHHHHHHH
Confidence 9999999999999877653 322457788999873 44444443
No 18
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=100.00 E-value=3.1e-62 Score=506.35 Aligned_cols=365 Identities=18% Similarity=0.183 Sum_probs=290.5
Q ss_pred ccccCCcccccccccCCcccHHHHHhh----------hhhccccccccchHHHHhhhhcCCCcccccccceEEechhhHH
Q 046958 17 NLGFIFFPLGPSEHWAGFRLVVENRTV----------QWRSNKMVPVQRIPELTRSRQQTASSEGETLDRTLMTTIDTWL 86 (417)
Q Consensus 17 ~~~~~g~pl~p~i~W~D~R~~~~~~~~----------~~~G~~~~~~~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~dyi 86 (417)
.+|.+|+|++|+|+|+|.|+.++++++ +++|+++++.++++||+|+++|+|+ +++++.+++.++|||
T Consensus 88 ~~D~~G~~l~~~i~w~D~R~~~~~~~l~~~~~~~~~~~~tG~~~~~~~~~~kl~Wl~~~~P~---~~~~~~~~l~~~dyl 164 (489)
T 2uyt_A 88 LLDQQGQRVGLPVAYRDSRTNGLMAQAQQQLGKRDIYQRSGIQFLPFNTLYQLRALTEQQPE---LIPHIAHALLMPDYF 164 (489)
T ss_dssp EECTTSCEESCCBCTTCGGGTTHHHHHHHHHCHHHHHHHHCCCCCTTSHHHHHHHHHHHCGG---GGGGCCEEEEHHHHH
T ss_pred EECCCCCCccCCccccCCccHHHHHHHHHhcCHHHHHHHhCCCCCCccHHHHHHHHHhcCch---HHHHhhhccCcHHHH
Confidence 357789999999999999999887655 2579999999999999999999997 899999999999999
Q ss_pred HHHHhCCCCCceEEechhhhhhcccccCCCCCCCHHHHHhcCCCCCCCCCccccCcceeeeccCCCCCCCcEEe-ccchH
Q 046958 87 IWSLTGGVNGDLHVTDVSNASRTMLMNLKTLDWDKPTLETLGIPAEIRPKIVSNSEIIGKIGKGCPITGIPISG-CLGNQ 165 (417)
Q Consensus 87 ~~~LTG~~~~~~~~~d~s~As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~g~l~~g~pV~~-g~~D~ 165 (417)
.|+||| ++++|+|+||+|+|||+++++||+++|+.+||+.++||+|+++++++|+++.. ..+|+||++ |++|+
T Consensus 165 ~~~LTG-----~~~~d~s~As~t~l~d~~~~~W~~~ll~~~gi~~~~lP~i~~~~~~~G~~~~~-~~~g~pV~~~g~~D~ 238 (489)
T 2uyt_A 165 SYRLTG-----KMNWEYTNATTTQLVNINSDDWDESLLAWSGANKAWFGRPTHPGNVIGHWICP-QGNEIPVVAVASHDT 238 (489)
T ss_dssp HHHHHS-----CCCCBHHHHGGGTCEETTTTEECHHHHHHHTCCGGGSCCCBCTTCEEEEEECT-TCCEEEEECCCCBHH
T ss_pred HHHHhC-----CccceehhhhhhcccccCcCccCHHHHHHcCCCHHHCCCccCCCcceeeeecc-cCCCCcEEEECchHH
Confidence 999999 89999999999999999999999999999999999999999999999998643 347899997 88999
Q ss_pred HHhHhcCcC-CCCceEEeccCcceeeeecCcceeccCCCcee--eec------eecCCCCCchhhhhhhcC--CCCcHHH
Q 046958 166 HAAMLGQAC-KKGEAKSTYGTGAFIRLNTGEEVVKSKHGLLS--TLA------FKLGPKAPTNYALEDSLG--IISNASE 234 (417)
Q Consensus 166 ~aa~lg~g~-~~g~~~~s~GTs~~~~~~~~~~~~~~~~g~~~--~~~------~~~g~~~~~~~~l~~~~~--~~~~~~~ 234 (417)
+|+++|+|+ ++|++++++|||+++.+.++ .+..++.+... .++ |.......+.|..++.+. ..+.|++
T Consensus 239 ~aa~~g~g~~~~g~~~~s~GTs~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~W~~~~~~~~~~~~~~~~ 317 (489)
T 2uyt_A 239 ASAVIASPLNGSRAAYLSSGTWSLMGFESQ-TPFTNDTALAANITNEGGAEGRYRVLKNIMGLWLLQRVLQERQINDLPA 317 (489)
T ss_dssp HHHHHHSCCCSTTEEEEEESSSEEEEEEES-SCCCSHHHHHHTCEEECCGGGCEEEEEEECTTHHHHHHHHHTTCCCHHH
T ss_pred HHHHhcCCCCCCCcEEEEEchHhhcccccC-CCccCHHHHhhcceeecCCCCeEEEehhHhHHHHHHHhhcccchhhHHH
Confidence 999999999 99999999999999877664 33322111110 000 100000113454432111 1346777
Q ss_pred HHHHHHhcCCCCCeEEccccCCCCCCCCCCC-----CceEEEcC--CCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 046958 235 IEELALRVNSTGGIYFVRAFNGLLAPWWRDD-----ARSVCIGI--TRFTSKAHFARAVLESMCFLVKDVLDSKQKDAVE 307 (417)
Q Consensus 235 l~~~a~~~~~~~gl~flP~l~Ger~P~~~~~-----~rg~~~Gl--~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~ 307 (417)
+.+.++..|+.+ ++|+| ++.|+++|+ .||.|.|+ +..|+++||+||++|||||++|++++.|++..|.
T Consensus 318 l~~~a~~~~~~~-~l~~p----~~~~~~~p~~~~~~~~g~~~g~~~~~~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~ 392 (489)
T 2uyt_A 318 LIAATQALPACR-FIINP----NDDRFINPDEMCSEIQAACREMAQPIPESDAELARCIFDSLALLYADVLHELAQLRGE 392 (489)
T ss_dssp HHHHHTTSCSSS-SCCCT----TSGGGSSCSCHHHHHHHHHHHTTCCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHhccCCCcC-eeECC----CCCccCChhhhHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 776664446655 45788 477788887 57889888 4789999999999999999999999999876677
Q ss_pred cccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHHHHHHHHHHhcCCCCC---HHHHHhccccCCCc
Q 046958 308 KGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTALGAAFAAGLAIGVFKE---EEIFASSERTKTST 384 (417)
Q Consensus 308 ~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~salGaAllA~~~~G~~~~---~~~~~~~~~~~~~~ 384 (417)
+ +++|+++||++||++|+||+|||+|+||+++. .|++++|||++|+.+.+...+ ++++++.+. . .+
T Consensus 393 ~--------~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~-~e~~alGaa~~A~~a~~~~~~~~~~~~~~~~~~-~-~~ 461 (489)
T 2uyt_A 393 D--------FSQLHIVGGGCQNTLLNQLCADACGIRVIAGP-VEASTLGNIGIQLMTLDELNNVDDFRQVVSTTA-N-LT 461 (489)
T ss_dssp C--------CSEEEEESGGGGCHHHHHHHHHHHTSEEEECC-TTHHHHHHHHHHHHHTTSCCCHHHHHHHHHHHS-C-CE
T ss_pred C--------CCEEEEeCChhhhHHHHHHHHHHHCCeeecCC-ccHhHHHHHHHHHHHcCccccHHHHHHHHHhhC-C-Ce
Confidence 7 89999999999999999999999999999876 799999998888887765544 445555552 3 58
Q ss_pred EEeCCCCHH-HHH-HHHHHHHHHHH
Q 046958 385 TFKPLLNEE-FRK-KKAESQCRAVE 407 (417)
Q Consensus 385 ~~~P~~~~~-~~y-~~y~~~~~~~~ 407 (417)
+|+|+++++ +.| ++|++|+++.+
T Consensus 462 ~~~P~~~~~~~~Y~~~~~~y~~~~~ 486 (489)
T 2uyt_A 462 TFTPNPDSEIAHYVALIHSTRQTKE 486 (489)
T ss_dssp EECCCTTSHHHHHHHHTTC------
T ss_pred EECCCcchHHHHHHHHHHHhhchhh
Confidence 999999998 888 46777776643
No 19
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=100.00 E-value=1.8e-59 Score=483.09 Aligned_cols=313 Identities=15% Similarity=0.121 Sum_probs=257.8
Q ss_pred ccccCCcccccccccCCcccHHHHHhhh-------hhccccccc--cchHHHHhhhhcCCCcccccccceEEechhhHHH
Q 046958 17 NLGFIFFPLGPSEHWAGFRLVVENRTVQ-------WRSNKMVPV--QRIPELTRSRQQTASSEGETLDRTLMTTIDTWLI 87 (417)
Q Consensus 17 ~~~~~g~pl~p~i~W~D~R~~~~~~~~~-------~~G~~~~~~--~~~~kl~wl~~~~p~~~~~~~~~~~~~~~~dyi~ 87 (417)
.+| +|+||+|+|+|+|+|+.+++++++ +||+++++. ++++||+|+++|+|+ +++++. |++++|||.
T Consensus 83 ~~D-~G~pl~~ai~w~D~R~~~~~~~l~~~~~~~~~tG~~~~~~~~~~~~kl~Wl~~~~Pe---~~~~~~-~l~~~dyl~ 157 (482)
T 3h6e_A 83 ALT-DGRLAFPPLDYEQSIPEAVMADYRSQRDPFARTGSPALPDGLNIGSQLWWLDQLHPD---VMANAT-LLPWAQYWA 157 (482)
T ss_dssp EEE-TTEECSCCBCTTSCCCHHHHHHHHTTCCCHHHHCCCCCSTTSSHHHHHHHHHHHSHH---HHHSCE-EEEHHHHHH
T ss_pred EEC-CCCEeccccccCCcccHHHHHHHHhhChHHHHhCCCCCCCchhHHHHHHHHHHcCch---hhhcCE-EEccHHHHH
Confidence 478 999999999999999999987663 579999987 899999999999997 789998 999999999
Q ss_pred HHHhCCCCCceEEechhh-hhhcccccCCCCCCCHHHHHhcCCCCCCCCCccccCcceeeecc------CCCCCCCcEEe
Q 046958 88 WSLTGGVNGDLHVTDVSN-ASRTMLMNLKTLDWDKPTLETLGIPAEIRPKIVSNSEIIGKIGK------GCPITGIPISG 160 (417)
Q Consensus 88 ~~LTG~~~~~~~~~d~s~-As~tgl~d~~~~~W~~~ll~~~gi~~~~LP~i~~~~~~~G~v~~------g~l~~g~pV~~ 160 (417)
|+||| +.++|+|+ ||+|+|||+++++|+ ++|+.+||+ ++||+|+++++++|+|++ | |++|+||++
T Consensus 158 ~~LTG-----~~~td~s~~As~t~l~d~~~~~W~-~ll~~~gi~-~~LP~v~~~~~~~G~l~~~~A~~~G-L~~g~pV~~ 229 (482)
T 3h6e_A 158 WFLTG-----RAVSEVTSLGCHSDLWDPQDGDFS-PMAKRLGWA-ARFAPIVRAGDTVGALLPAIAERTG-LSPDVQVLA 229 (482)
T ss_dssp HHTTS-----CCCEEHHHHTTTCSSEETTTTEEC-HHHHHTTCG-GGBCCEECTTSEEEECCHHHHHHHT-CCTTCEEEC
T ss_pred HHHhC-----CeeeecchhhhccCCccCCcCcHH-HHHHHcCCH-HhCCCCcCCCceeeeeCHHHHHHhC-CCCCCEEEE
Confidence 99999 89999998 899999999999999 599999999 999999999999999974 7 999999999
Q ss_pred ccchHHHhHhc---CcC-CCCc-eEEeccCcceeeeecCc---c-eecc-CCCceeee---ceecCC-CCCchhhhh---
Q 046958 161 CLGNQHAAMLG---QAC-KKGE-AKSTYGTGAFIRLNTGE---E-VVKS-KHGLLSTL---AFKLGP-KAPTNYALE--- 223 (417)
Q Consensus 161 g~~D~~aa~lg---~g~-~~g~-~~~s~GTs~~~~~~~~~---~-~~~~-~~g~~~~~---~~~~g~-~~~~~~~l~--- 223 (417)
|++|++|+++| +|+ ++|+ +++++|||.+++. +.+ + |..+ ..+++.++ +|..+. ...++..++
T Consensus 230 g~~D~~aa~lG~~g~g~~~~g~~~~~s~GT~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~G~~~~w~~ 308 (482)
T 3h6e_A 230 GLHDSNAALLAARGFAEIADNEATVLSTGTWFIAMR-LPATPVDTATLPEARDCLVNVDVHGRPVPSARFMGGREIETLI 308 (482)
T ss_dssp CEEHHHHHHHHHTTSTTTTTSSEEEEECSSSEEEEE-ECSSCCCGGGCCGGGTEEEEECTTSCEEEEEEECHHHHHHHHH
T ss_pred eCcHHHHHHhhhhccCCcCCCCEEEEECCceeEEEE-ecCccCCccccchhhceeeccccccccccchhhhhHHHHHHHH
Confidence 99999999999 999 9987 5899999987643 333 2 3222 23333221 121110 001122222
Q ss_pred hhcCCC----CcHHHHHHHHHhc-CCCCCeEEccccCCCCCCCCCCCCceEEEcCCCCCCHHHHHHHHHHH--HHHHHHH
Q 046958 224 DSLGII----SNASEIEELALRV-NSTGGIYFVRAFNGLLAPWWRDDARSVCIGITRFTSKAHFARAVLES--MCFLVKD 296 (417)
Q Consensus 224 ~~~~~~----~~~~~l~~~a~~~-~~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~~~~~~~~l~rAvlEg--ia~~~~~ 296 (417)
+..+.. .++.++ ++... ++++|++|+|||.|||+|+||+ ||+|+||+. +|++||++|+ |||++|+
T Consensus 309 ~~~~~~~~~~~~~~~~--~a~~~~~g~~Gl~flP~l~Ger~P~~d~--rG~~~Gl~~----~~l~RA~lE~~Gia~~~r~ 380 (482)
T 3h6e_A 309 EIDTRRVDIKPDQPAL--LAAVPEVLRHGRMILPTLMRGFGPYPHG--RFAWINRPE----DWFERRAAACLYAALVADT 380 (482)
T ss_dssp CSGGGCTTCGGGHHHH--HHTHHHHHHTTCEEESCSSTTCSSCTTC--CCEEESCCS----SHHHHHHHHHHHHHHHHHH
T ss_pred HhcccccccccchhhH--HHhccccCCCCeEEecCCCCCCCCCCCC--ceEEeCCCH----HHHHHHHHHHHhHHHHHHH
Confidence 111211 223333 22222 4789999999999999999987 999999998 7999999995 9999999
Q ss_pred HHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHh-hCCcEEccCCCChhHHHHHHHHHHh
Q 046958 297 VLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADL-LGSPVLRPADIESTALGAAFAAGLA 364 (417)
Q Consensus 297 ~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv-~g~pv~~~~~~e~salGaAllA~~~ 364 (417)
+++.|++ .++|+++||++||++|+||+||| +|+||++++..|++++|||++|+.+
T Consensus 381 ~l~~~~~-------------~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 381 ALDLIGS-------------TGRILVEGRFAEADVFVRALASLRPDCAVYTANAHNDVSFGALRLIDPG 436 (482)
T ss_dssp HHHHTTC-------------CSEEEEESGGGGCHHHHHHHHHHSTTSEEEEESSCCCTTGGGHHHHCTT
T ss_pred HHHHhcC-------------CCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcCCCchHHHHHHHHhCcc
Confidence 9998864 36899999999999999999999 9999999999999999999999887
No 20
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=99.24 E-value=2e-12 Score=123.10 Aligned_cols=116 Identities=20% Similarity=0.144 Sum_probs=92.3
Q ss_pred hhcCCCCcHHHHHHHHHhcCCCCCeEEccccCCCCCCCCCCCCceEEEcCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHH
Q 046958 224 DSLGIISNASEIEELALRVNSTGGIYFVRAFNGLLAPWWRDDARSVCIGIT-RFTSKAHFARAVLESMCFLVKDVLDSKQ 302 (417)
Q Consensus 224 ~~~~~~~~~~~l~~~a~~~~~~~gl~flP~l~Ger~P~~~~~~rg~~~Gl~-~~~~~~~l~rAvlEgia~~~~~~~~~l~ 302 (417)
+.|+. +++++++++.+.+ .|+..|+|++.+ +++.++++. ..++++|++|+++|+|++++..+ ++
T Consensus 140 ~~lg~--~~~el~~la~~~~-------~p~~~~~~c~vf---a~s~v~~l~~~g~~~~di~~av~e~Va~~i~~~---~~ 204 (270)
T 1hux_A 140 NILEV--KVSDLAELGAKST-------KRVAISSTCTVF---AESEVISQLSKGTDKIDIIAGIHRSVASRVIGL---AN 204 (270)
T ss_dssp HHHTC--CTTTHHHHHTTCC-------SCCCCCCCSHHH---HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHH---HH
T ss_pred HHhCC--CHHHHHHHHhhCC-------CCCCcccccchh---HhHHHHHHhhCCCCHHHHHHHHHHHHHHHHHHH---Hh
Confidence 45664 5778888876532 567778888743 677777765 68899999999999999998544 33
Q ss_pred hhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCC-hhHHHHHHHHHHh
Q 046958 303 KDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIE-STALGAAFAAGLA 364 (417)
Q Consensus 303 ~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e-~salGaAllA~~~ 364 (417)
. .+. .++|+++||+++|+.|+|+++|++++||.+++..+ .+|+|||++|+..
T Consensus 205 ~-~~~---------~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 205 R-VGI---------VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp T-TCC---------CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred c-CCC---------CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 3 222 36799999999999999999999999999988777 6999999999765
No 21
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=98.00 E-value=1.5e-05 Score=75.19 Aligned_cols=77 Identities=17% Similarity=0.112 Sum_probs=63.1
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCC-CChhH
Q 046958 276 FTSKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPAD-IESTA 354 (417)
Q Consensus 276 ~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~-~e~sa 354 (417)
...++++++++++.++-.+....... . . +++|+++||.++|+.+++.+++.+|+++.+++. .+.+|
T Consensus 179 ~~~~~di~a~~~~~v~~~l~~~~~~~----~-~--------~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A 245 (276)
T 4ehu_A 179 NAKIEDIVAGIHTSVAKRVSSLVKRI----G-V--------QRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGA 245 (276)
T ss_dssp TCCHHHHHHHHHHHHHHHHHHHHHHH----C-C--------CSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhc----c-c--------CCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHH
Confidence 46789999999999987765543322 1 2 678999999999999999999999999999874 56889
Q ss_pred HHHHHHHHHhc
Q 046958 355 LGAAFAAGLAI 365 (417)
Q Consensus 355 lGaAllA~~~~ 365 (417)
+|||++|....
T Consensus 246 ~GAAl~A~~~~ 256 (276)
T 4ehu_A 246 LGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999996553
No 22
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=97.93 E-value=6.8e-05 Score=71.31 Aligned_cols=122 Identities=16% Similarity=0.089 Sum_probs=79.0
Q ss_pred CcHHHHHHHHHhcCCCCCeEEccccCCCCCCCCCCCCceEEEc-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 046958 230 SNASEIEELALRVNSTGGIYFVRAFNGLLAPWWRDDARSVCIG-----ITRFTSKAHFARAVLESMCFLVKDVLDSKQKD 304 (417)
Q Consensus 230 ~~~~~l~~~a~~~~~~~gl~flP~l~Ger~P~~~~~~rg~~~G-----l~~~~~~~~l~rAvlEgia~~~~~~~~~l~~~ 304 (417)
.+++++.+++.+-...+-=+.+-.++|...+....+..++.+| +....+++|++++++.+|+.++..+.....+
T Consensus 155 ~~~~el~~lA~~g~~~~vDl~v~DIy~~~~~~l~~~s~as~Fgk~~~l~~~g~~~eDIaasl~~sV~~~I~~la~~~a~- 233 (287)
T 2ews_A 155 TDYKQLTDMAQHGDRNTIDLKVRHIYKDTEPPIPGDLTAANFGHVLHHLDADFTPSNKLAAVIGVVGEVVTTMAITVAR- 233 (287)
T ss_dssp CCHHHHHHHHTTCCCTTTCEETTTC-------CCTTSEEETTTTGGGCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred CCHHHHHHHHHcCCccccccchhhhcCCCCCCcCcchhhHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 4899999998643211111122222221111111233333333 2345789999999999999888776544332
Q ss_pred ccccccccCCCCCceEEEecC-ccccHHHHHHHHHh---hCCcEEccCCCC-hhHHHHHHHH
Q 046958 305 AVEKGVIKDAKPEFVLRVDGG-ATVNNLLMQIQADL---LGSPVLRPADIE-STALGAAFAA 361 (417)
Q Consensus 305 ~g~~~~~~~~~~~~~i~~~GG-~a~s~~~~q~~Adv---~g~pv~~~~~~e-~salGaAllA 361 (417)
..+ +++|+++|| .+.|+.+++.+.+. .+.++.+++..+ .+|+|||+.|
T Consensus 234 -~~~--------i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlGAaL~~ 286 (287)
T 2ews_A 234 -EFK--------TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIGALYLE 286 (287)
T ss_dssp -HTT--------CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHHHHHTC
T ss_pred -hCC--------CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHHHHHhC
Confidence 233 678999999 79999999999998 488899887654 8999999864
No 23
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=97.87 E-value=0.00011 Score=71.74 Aligned_cols=121 Identities=18% Similarity=0.076 Sum_probs=82.4
Q ss_pred CcHHHHHHHHHhcCC-CCCeEEccccCCCCCC--CCCCCCceEEEcCC------CCCCHHHHHHHHHHHHHHHHHHHHHH
Q 046958 230 SNASEIEELALRVNS-TGGIYFVRAFNGLLAP--WWRDDARSVCIGIT------RFTSKAHFARAVLESMCFLVKDVLDS 300 (417)
Q Consensus 230 ~~~~~l~~~a~~~~~-~~gl~flP~l~Ger~P--~~~~~~rg~~~Gl~------~~~~~~~l~rAvlEgia~~~~~~~~~ 300 (417)
.+|+++.++|.+-.. .-. +.+-.+.|..-+ ....+..++-+|-. ...+++|++++++..|+.++.++.-.
T Consensus 221 ~~~dEl~~lA~~Gd~~~vD-llV~DIYg~~y~~~gL~~~~~ASsFGk~~~~~~~~~~~~eDIa~gll~sVa~~I~~lA~l 299 (360)
T 2i7n_A 221 ETFEEALEMAAKGDSTNVD-KLVKDIYGGDYERFGLQGSAVASSFGNMMSKEKRDSISKEDLARATLVTITNNIGSIARM 299 (360)
T ss_dssp CSHHHHHHHHHHCCGGGTS-EEHHHHHSSCBGGGTBCTTSEEETTTTTTSHHHHTTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHcCCCCccc-ceeeecccCcccccCCCccceeehhhhHhhHhhhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 689999999876321 111 222333332111 11234444545533 25689999999999999998877533
Q ss_pred HHhhccccccccCCCCCceEEEecC-ccccHHHHHHHHHhhC------CcEEccCCC-ChhHHHHHHHH
Q 046958 301 KQKDAVEKGVIKDAKPEFVLRVDGG-ATVNNLLMQIQADLLG------SPVLRPADI-ESTALGAAFAA 361 (417)
Q Consensus 301 l~~~~g~~~~~~~~~~~~~i~~~GG-~a~s~~~~q~~Adv~g------~pv~~~~~~-e~salGaAllA 361 (417)
..+..+ +++|+++|| .++|+..+++++..++ +++.+++.. -.+|+|||+.+
T Consensus 300 ~A~~~~----------i~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 300 CALNEN----------IDRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp HHHHHT----------CCCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred HHHHcC----------CCeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 322223 668999999 8999999999999985 678877654 49999999976
No 24
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=97.30 E-value=0.00039 Score=73.13 Aligned_cols=82 Identities=20% Similarity=0.200 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEcc-CCCChhHHHH
Q 046958 279 KAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRP-ADIESTALGA 357 (417)
Q Consensus 279 ~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~-~~~e~salGa 357 (417)
..++++.+++.+...++..++...- ...+ ++.|+++||+++.|.+.+++.+.||+++... +..++.|+||
T Consensus 305 ~e~l~~~~~~~i~~~v~~~L~~a~~-~~~~--------i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GA 375 (605)
T 4b9q_A 305 LESLVEDLVNRSIEPLKVALQDAGL-SVSD--------IDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGA 375 (605)
T ss_dssp HHHHHHHHHHHTTHHHHHHHHHTTC-CGGG--------CSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCC-CHHH--------CcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhH
Confidence 3455666677666666666554321 1223 8899999999999999999999999998774 4678999999
Q ss_pred HHHHHHhcCCCC
Q 046958 358 AFAAGLAIGVFK 369 (417)
Q Consensus 358 AllA~~~~G~~~ 369 (417)
|+.|+.-.|..+
T Consensus 376 ai~a~~l~~~~~ 387 (605)
T 4b9q_A 376 AVQGGVLTGDVK 387 (605)
T ss_dssp HHHHHHHHTSSC
T ss_pred HHHHHHhcCCCC
Confidence 999998776543
No 25
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=97.22 E-value=0.00082 Score=66.27 Aligned_cols=75 Identities=20% Similarity=0.198 Sum_probs=57.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhh-CCcEEcc-CCCChhHHHH
Q 046958 280 AHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLL-GSPVLRP-ADIESTALGA 357 (417)
Q Consensus 280 ~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~-g~pv~~~-~~~e~salGa 357 (417)
.++++..++.+.-.++..++.... .... ++.|+++||+++.|.+.+++.+.| +.+|... +..++.|+||
T Consensus 316 ~~~~~~~~~~i~~~i~~~l~~~~~-~~~~--------i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Ga 386 (394)
T 3qfu_A 316 EELNLDLFKKTLKPVEKVLQDSGL-EKKD--------VDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGA 386 (394)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHHTC-CGGG--------CCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC-CHHH--------CCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHH
Confidence 445566666666666666655431 1223 799999999999999999999999 8888775 5678999999
Q ss_pred HHHHHH
Q 046958 358 AFAAGL 363 (417)
Q Consensus 358 AllA~~ 363 (417)
|+.|+.
T Consensus 387 a~~a~~ 392 (394)
T 3qfu_A 387 AVQAGV 392 (394)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 999874
No 26
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=97.20 E-value=0.00079 Score=66.77 Aligned_cols=78 Identities=19% Similarity=0.241 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhh-CCcEEcc-CCCChhHHHH
Q 046958 280 AHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLL-GSPVLRP-ADIESTALGA 357 (417)
Q Consensus 280 ~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~-g~pv~~~-~~~e~salGa 357 (417)
.++++.+++.+.-.++..++.... .... ++.|+++||+++.|.+.+++.+.| +.+|... +..++.|+||
T Consensus 324 ~~~~~~~~~~i~~~i~~~l~~~~~-~~~~--------i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Ga 394 (404)
T 3i33_A 324 EELNADLFRGTLEPVEKALRDAKL-DKGQ--------IQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGA 394 (404)
T ss_dssp HHHTHHHHHHTHHHHHHHHHHHTC-CGGG--------CCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCC-CHhh--------CCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHH
Confidence 344555566666555555554321 1223 789999999999999999999999 8888775 5678999999
Q ss_pred HHHHHHhcC
Q 046958 358 AFAAGLAIG 366 (417)
Q Consensus 358 AllA~~~~G 366 (417)
|+.|+.-.|
T Consensus 395 a~~a~~l~~ 403 (404)
T 3i33_A 395 AVQAAILIG 403 (404)
T ss_dssp HHHHHHHC-
T ss_pred HHHHHHhcC
Confidence 999986544
No 27
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=97.18 E-value=0.00018 Score=67.42 Aligned_cols=71 Identities=25% Similarity=0.345 Sum_probs=54.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccC-CCChhHHH
Q 046958 278 SKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPA-DIESTALG 356 (417)
Q Consensus 278 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~-~~e~salG 356 (417)
...++++.+++.++..++..++. .+ . ++.|+++||+++++.+.+++++.|+.||.++. ..+++|+|
T Consensus 201 ~~~~~~~~~~~~i~~~i~~~l~~----~~-~--------~~~ivL~GG~a~~~~l~~~l~~~l~~~v~~~~~p~~a~a~G 267 (272)
T 3h1q_A 201 EIMRVVRPVIEKMALIVKEVIKN----YD-Q--------TLPVYVVGGTAYLTGFSEEFSRFLGKEVQVPIHPLLVTPLG 267 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTT----SC-S--------SCCEEEESGGGGSTTHHHHHHHHHSSCCBCCSSGGGHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh----cC-C--------CCEEEEECCccchhhHHHHHHHHhCCCccccCChHHHHHHH
Confidence 34566777777776655554432 22 2 67899999999999999999999999999865 45799999
Q ss_pred HHHHH
Q 046958 357 AAFAA 361 (417)
Q Consensus 357 aAllA 361 (417)
||+.|
T Consensus 268 aal~a 272 (272)
T 3h1q_A 268 IALFG 272 (272)
T ss_dssp HHTTC
T ss_pred HHhcC
Confidence 99853
No 28
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=97.14 E-value=0.00093 Score=66.46 Aligned_cols=75 Identities=20% Similarity=0.135 Sum_probs=53.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEc---------cCCCC
Q 046958 281 HFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLR---------PADIE 351 (417)
Q Consensus 281 ~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~---------~~~~e 351 (417)
++++.+++.+.-.++..++...- .... ++.|+++||+++.|.+.+++.+.|+.++.+ .+..+
T Consensus 318 ~~~~~~~~~i~~~i~~~l~~~~~-~~~~--------i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ 388 (409)
T 4gni_A 318 TIARTVFEGFNRLVESAVKKAGL-DPLD--------VDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSE 388 (409)
T ss_dssp HHTHHHHHHHHHHHHHHHHHTTC-CGGG--------CCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHcCC-CHHH--------CCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHH
Confidence 34455555555555555443221 1223 789999999999999999999999987433 45678
Q ss_pred hhHHHHHHHHHHh
Q 046958 352 STALGAAFAAGLA 364 (417)
Q Consensus 352 ~salGaAllA~~~ 364 (417)
+.|+|||+.|+.-
T Consensus 389 ava~GAa~~~~~~ 401 (409)
T 4gni_A 389 LQARGAALQASLI 401 (409)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhh
Confidence 9999999998754
No 29
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=96.69 E-value=0.0021 Score=63.15 Aligned_cols=46 Identities=24% Similarity=0.272 Sum_probs=41.5
Q ss_pred CceEEEecCccccHHHHHHHHHhhCCcEEccC-CCChhHHHHHHHHH
Q 046958 317 EFVLRVDGGATVNNLLMQIQADLLGSPVLRPA-DIESTALGAAFAAG 362 (417)
Q Consensus 317 ~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~-~~e~salGaAllA~ 362 (417)
++.|+++||+++.|.+.+.+.+.|+.++.... ..++.|+|||+.|+
T Consensus 334 i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~ 380 (383)
T 1dkg_D 334 IDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGG 380 (383)
T ss_dssp CCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTT
T ss_pred CCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHH
Confidence 78999999999999999999999999887654 57799999999875
No 30
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=96.60 E-value=0.0042 Score=63.75 Aligned_cols=77 Identities=19% Similarity=0.170 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEcc-CCCChhHHHHHH
Q 046958 281 HFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRP-ADIESTALGAAF 359 (417)
Q Consensus 281 ~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~-~~~e~salGaAl 359 (417)
.+++.+++.+.-.++..++... ..... ++.|+++||+++.|.+.+.+.+.|+.++... +..++.|+|||+
T Consensus 276 ~l~~~~~~~i~~~i~~~L~~a~-~~~~~--------i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~ 346 (509)
T 2v7y_A 276 ELSAHLVERTMGPVRQALQDAG-LTPAD--------IDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAI 346 (509)
T ss_dssp HHTHHHHHTTHHHHHHHHHHHT-CCGGG--------CSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHcC-CChhH--------CcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHH
Confidence 3445555555555555554432 11123 7899999999999999999999999887654 467899999999
Q ss_pred HHHHhcC
Q 046958 360 AAGLAIG 366 (417)
Q Consensus 360 lA~~~~G 366 (417)
.|+.-.|
T Consensus 347 ~a~~l~~ 353 (509)
T 2v7y_A 347 QGGVIAG 353 (509)
T ss_dssp HHHHHHT
T ss_pred HHHHhcC
Confidence 9987555
No 31
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=96.58 E-value=0.014 Score=56.51 Aligned_cols=85 Identities=13% Similarity=0.101 Sum_probs=68.7
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhh---CCcEEccC----C
Q 046958 277 TSKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLL---GSPVLRPA----D 349 (417)
Q Consensus 277 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~---g~pv~~~~----~ 349 (417)
..++++.+++.+.++-.+...+....+..+ +++|+++||.++|..+++.+.+.+ |.+|.+++ .
T Consensus 220 ~~~~diAasfq~~l~~~l~~~~~~a~~~~g----------~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~ 289 (334)
T 3eno_A 220 QAIEDISYSIQETAFAMLVEVLERALYVSG----------KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCM 289 (334)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHcC----------CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCC
Confidence 468999999999999988888777655444 679999999999999999999988 78888764 3
Q ss_pred CChhHHHHHHHHHHhcCCCCCH
Q 046958 350 IESTALGAAFAAGLAIGVFKEE 371 (417)
Q Consensus 350 ~e~salGaAllA~~~~G~~~~~ 371 (417)
..+.++|.|.+.....|...++
T Consensus 290 D~G~~iG~a~~~~~~~g~~~~~ 311 (334)
T 3eno_A 290 DNGIMIAQAALLMYKSGVRMSV 311 (334)
T ss_dssp CCTHHHHHHHHHHHHTTCCCCG
T ss_pred hHHHHHHHHHHHHHHcCCCCCc
Confidence 5688899998777766765544
No 32
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=96.54 E-value=0.019 Score=56.03 Aligned_cols=106 Identities=17% Similarity=0.083 Sum_probs=70.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhC-CcEEccCC-----
Q 046958 276 FTSKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLG-SPVLRPAD----- 349 (417)
Q Consensus 276 ~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g-~pv~~~~~----- 349 (417)
..+++|+.+-+.|-.|.++.+.++.+. .. +++|+++|||++|+.+|+.++..+. .+|...+.
T Consensus 255 ~ls~~Dv~ATLt~~TA~sIa~~~~~~~----~~--------~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~ 322 (371)
T 3qbx_A 255 ALPAADIQATLLELSARSISESLLDAQ----PD--------CEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPP 322 (371)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHHHHHHC----TT--------CCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCT
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhcc----CC--------CceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCCh
Confidence 357999999999999998888877653 23 6799999999999999999999984 77776542
Q ss_pred CChhHHHHHHHHHHhc-CCCCCHHHHHhccccCCCcEEeCCCCHH
Q 046958 350 IESTALGAAFAAGLAI-GVFKEEEIFASSERTKTSTTFKPLLNEE 393 (417)
Q Consensus 350 ~e~salGaAllA~~~~-G~~~~~~~~~~~~~~~~~~~~~P~~~~~ 393 (417)
.---|+.-|.+|...+ |.-.++...-..-.....-.+.|-..++
T Consensus 323 d~~EA~aFA~LA~~~l~g~p~~lp~vTGA~~~~~lG~i~p~~~~~ 367 (371)
T 3qbx_A 323 AWMEGMAFAWLAHRFLERLPGNCPDVTGALGPRTLGALYPAGSHH 367 (371)
T ss_dssp TTHHHHHHHHHHHHHHTTCCCSCHHHHCCSSCCCCCEEECC----
T ss_pred hHHHHHHHHHHHHHHHcCCCCCCCcccCCCCCccCceeccCCCcc
Confidence 1233566677776654 4444554442211123566778876543
No 33
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=96.49 E-value=0.015 Score=56.28 Aligned_cols=85 Identities=13% Similarity=0.075 Sum_probs=67.4
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhh---CCcEEccC----C
Q 046958 277 TSKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLL---GSPVLRPA----D 349 (417)
Q Consensus 277 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~---g~pv~~~~----~ 349 (417)
.+++++.+++.+.++-.+....+.+.+..+ .++|.++||.++|..+++.+.+.+ |.+|.+++ .
T Consensus 215 ~~~~diAa~fq~~l~~~l~~~~~~~~~~~~----------~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~ 284 (330)
T 2ivn_A 215 YRVEDLAYSFQETAFAALVEVTERAVAHTE----------KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCR 284 (330)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCC
Confidence 468999999999999998888877765444 679999999999999999999887 77888765 2
Q ss_pred CChhHHHHHHHHHHhcCCCCCH
Q 046958 350 IESTALGAAFAAGLAIGVFKEE 371 (417)
Q Consensus 350 ~e~salGaAllA~~~~G~~~~~ 371 (417)
..+.++|+|.......|...++
T Consensus 285 D~G~~iG~a~~~~~~~~~~~~~ 306 (330)
T 2ivn_A 285 DNGAMIAYTGLRMYKAGISFRL 306 (330)
T ss_dssp SCHHHHHHHHHHHHHTTCCCCG
T ss_pred hhHHHHHHHHHHHHhcCCCCCc
Confidence 4577899988766555554443
No 34
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=96.41 E-value=0.0053 Score=65.23 Aligned_cols=81 Identities=23% Similarity=0.282 Sum_probs=58.2
Q ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEc-cCCCChh
Q 046958 278 SKAHF---ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLR-PADIEST 353 (417)
Q Consensus 278 ~~~~l---~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~-~~~~e~s 353 (417)
++.+| +..+++.+.-.++..++...- ...+ ++.|+++||+++.|.+.+++.+.||+++.. .+..++.
T Consensus 302 tr~~fe~l~~~l~~~i~~~i~~~L~~a~l-~~~~--------I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaV 372 (675)
T 3d2f_A 302 SREELEELVKPLLERVTEPVTKALAQAKL-SAEE--------VDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAI 372 (675)
T ss_dssp EHHHHHHHTHHHHTTTTHHHHHHHHHHTC-CGGG--------CCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHH
T ss_pred eHHHHHHHHHHHHHHHHHHHHHHHHHhCC-Chhh--------CcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHH
Confidence 45444 444555554445544443320 1123 899999999999999999999999998876 4567899
Q ss_pred HHHHHHHHHHhcCC
Q 046958 354 ALGAAFAAGLAIGV 367 (417)
Q Consensus 354 alGaAllA~~~~G~ 367 (417)
|+|||+.|+.-.|.
T Consensus 373 A~GAa~~a~~ls~~ 386 (675)
T 3d2f_A 373 AKGAAFICAIHSPT 386 (675)
T ss_dssp HHHHHHHHHHTCSS
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999876654
No 35
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=96.05 E-value=0.024 Score=60.77 Aligned_cols=80 Identities=18% Similarity=0.189 Sum_probs=63.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhh---CCcEEccC----C
Q 046958 277 TSKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLL---GSPVLRPA----D 349 (417)
Q Consensus 277 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~---g~pv~~~~----~ 349 (417)
.+++++.+++.++++-.+......+.+..| +++|.++||.++|..+++.+.+.+ |.++..+. .
T Consensus 664 ~~~~dIAasFq~ala~~L~~~~~~a~~~~g----------~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~ 733 (761)
T 3vth_A 664 FEKSYISAKFHNTVVNFTYDLANLIRKETG----------INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCN 733 (761)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCC
Confidence 467888888888888888877776655445 679999999999999999998887 78888754 3
Q ss_pred CChhHHHHHHHHHHhcC
Q 046958 350 IESTALGAAFAAGLAIG 366 (417)
Q Consensus 350 ~e~salGaAllA~~~~G 366 (417)
..+.++|.|++|+...+
T Consensus 734 DgGialGQA~~a~~~~~ 750 (761)
T 3vth_A 734 DGGISLGQAVIANKILE 750 (761)
T ss_dssp GGGHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHHHHHhc
Confidence 45678999999875543
No 36
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=95.97 E-value=0.0047 Score=59.77 Aligned_cols=45 Identities=20% Similarity=0.248 Sum_probs=40.7
Q ss_pred ceEEEecCccccHHHHHHHHHhhCCcEEcc-CCCChhHHHHHHHHH
Q 046958 318 FVLRVDGGATVNNLLMQIQADLLGSPVLRP-ADIESTALGAAFAAG 362 (417)
Q Consensus 318 ~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~-~~~e~salGaAllA~ 362 (417)
+.|+++||+++.|.+.+.+.+.|+.+|.+. +..++.++|||++|.
T Consensus 279 ~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~ 324 (344)
T 1jce_A 279 RGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLD 324 (344)
T ss_dssp HCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGG
T ss_pred CcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHh
Confidence 579999999999999999999999999886 457799999999875
No 37
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=95.86 E-value=0.014 Score=60.54 Aligned_cols=50 Identities=22% Similarity=0.274 Sum_probs=43.8
Q ss_pred CceEEEecCccccHHHHHHHHHhhC-CcEEcc-CCCChhHHHHHHHHHHhcC
Q 046958 317 EFVLRVDGGATVNNLLMQIQADLLG-SPVLRP-ADIESTALGAAFAAGLAIG 366 (417)
Q Consensus 317 ~~~i~~~GG~a~s~~~~q~~Adv~g-~pv~~~-~~~e~salGaAllA~~~~G 366 (417)
++.|+++||+++.|.+.+.+.+.|+ +++... +..++.|+|||+.|+.-.|
T Consensus 331 i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~ 382 (554)
T 1yuw_A 331 IHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSG 382 (554)
T ss_dssp CCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTS
T ss_pred CcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcC
Confidence 8999999999999999999999996 777654 5678999999999987655
No 38
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=95.82 E-value=0.036 Score=58.23 Aligned_cols=78 Identities=19% Similarity=0.133 Sum_probs=64.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhh-CCcEEccC----CC
Q 046958 276 FTSKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLL-GSPVLRPA----DI 350 (417)
Q Consensus 276 ~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~-g~pv~~~~----~~ 350 (417)
..+++++.+++.++++-.+......+.+..| +++|.++||.++|..+++.+.+.+ |.+|..+. ..
T Consensus 569 g~~~~dIAasFh~ala~~L~~~~~ra~~~~g----------~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~D 638 (657)
T 3ttc_A 569 QAPVNQRAWAFHDALAQGFAALMREQATMRG----------ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGD 638 (657)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHTTT----------CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSG
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHcC----------CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCc
Confidence 4578999999999999998888877665444 679999999999999999999998 88887643 35
Q ss_pred ChhHHHHHHHHHH
Q 046958 351 ESTALGAAFAAGL 363 (417)
Q Consensus 351 e~salGaAllA~~ 363 (417)
.+.++|-|++|+.
T Consensus 639 nGiaLGQA~~a~~ 651 (657)
T 3ttc_A 639 GGLSLGQGVIAAA 651 (657)
T ss_dssp GGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 5788999998863
No 39
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=95.64 E-value=0.023 Score=61.06 Aligned_cols=82 Identities=16% Similarity=0.221 Sum_probs=64.5
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhh---CCcEEccC----C
Q 046958 277 TSKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLL---GSPVLRPA----D 349 (417)
Q Consensus 277 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~---g~pv~~~~----~ 349 (417)
.+++++.+++-+.++-.+.+.+..+.+.+| ++.|.++||.+.|..+++.+.+.+ |..|.++. .
T Consensus 676 ~~~~dIAasfQ~al~~~L~~~~~~a~~~tg----------~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~n 745 (772)
T 4g9i_A 676 ASPADIAYSAHLALARAFAHTAVERAREFG----------VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRG 745 (772)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHTTT----------CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCC
Confidence 467888888888888888777777665455 679999999999999999998876 56676643 3
Q ss_pred CChhHHHHHHHHHHhcCCC
Q 046958 350 IESTALGAAFAAGLAIGVF 368 (417)
Q Consensus 350 ~e~salGaAllA~~~~G~~ 368 (417)
..+.|+|.|++|+..+.-+
T Consensus 746 DgGiALGQA~iA~~~L~~~ 764 (772)
T 4g9i_A 746 DNGVNVGQAFLGGLYLEGY 764 (772)
T ss_dssp GGGHHHHHHHHHHHHHHTS
T ss_pred cchHHHHHHHHHHHHHhcc
Confidence 4577999999998876544
No 40
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=95.59 E-value=0.041 Score=53.72 Aligned_cols=85 Identities=21% Similarity=0.175 Sum_probs=60.8
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhh-CCcEEccCC-----C
Q 046958 277 TSKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLL-GSPVLRPAD-----I 350 (417)
Q Consensus 277 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~-g~pv~~~~~-----~ 350 (417)
.+++|+.+-+.|-.|.++.+.++.+. . ..+|+++|||++|+.+|+.++..+ +.+|...+. .
T Consensus 263 l~~~Dv~ATLt~~TA~sIa~~~~~~~-----~--------~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d 329 (370)
T 3cqy_A 263 LNEEDIQSTLLDLTCHSIAQDILKLA-----Q--------EGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPK 329 (370)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHC-----S--------SEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTT
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHhcC-----C--------CCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChh
Confidence 36899999999999998888876651 3 579999999999999999999999 556665331 1
Q ss_pred ChhHHHHHHHHHHhc-CCCCCHHHH
Q 046958 351 ESTALGAAFAAGLAI-GVFKEEEIF 374 (417)
Q Consensus 351 e~salGaAllA~~~~-G~~~~~~~~ 374 (417)
.--|+.-|.+|...+ |.-.++...
T Consensus 330 ~~EA~aFA~LA~~~l~g~p~nlp~v 354 (370)
T 3cqy_A 330 WAEGIAFAWLAMRYQLGLPANLPAV 354 (370)
T ss_dssp THHHHHHHHHHHHHHTTCCCCCHHH
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCcc
Confidence 223455566666553 444444443
No 41
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=95.28 E-value=0.016 Score=60.69 Aligned_cols=50 Identities=24% Similarity=0.284 Sum_probs=44.0
Q ss_pred CceEEEecCccccHHHHHHHHHhhCCcEEc-cCCCChhHHHHHHHHHHhcC
Q 046958 317 EFVLRVDGGATVNNLLMQIQADLLGSPVLR-PADIESTALGAAFAAGLAIG 366 (417)
Q Consensus 317 ~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~-~~~~e~salGaAllA~~~~G 366 (417)
++.|+++||+++.|.+.+++.+.||+++.. .+..++.|+|||+.|+.-.|
T Consensus 334 i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~ 384 (605)
T 2kho_A 334 IDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTG 384 (605)
T ss_dssp CSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTT
T ss_pred CceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcC
Confidence 899999999999999999999999988765 45678999999999976555
No 42
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=95.10 E-value=0.064 Score=55.48 Aligned_cols=80 Identities=21% Similarity=0.152 Sum_probs=63.6
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCC-cEEccC--CCChhH
Q 046958 278 SKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGS-PVLRPA--DIESTA 354 (417)
Q Consensus 278 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~-pv~~~~--~~e~sa 354 (417)
..+++.++.-+.++-.+.+....+.+.+| +++|.++||.+.|..+++.+.+..+. .+.++. ...+.+
T Consensus 279 ~~~dIAasfQ~~l~~~L~~~~~~a~~~tg----------~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~a 348 (576)
T 3ven_A 279 EYRDLAATAQAALERAVFGLADSVLARTG----------ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVS 348 (576)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHT----------CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHcC----------CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHH
Confidence 37899999888888888887777665455 67999999999999999998887765 666643 456788
Q ss_pred HHHHHHHHHhcCC
Q 046958 355 LGAAFAAGLAIGV 367 (417)
Q Consensus 355 lGaAllA~~~~G~ 367 (417)
+|+|+.+....|.
T Consensus 349 iGqA~~a~~~~g~ 361 (576)
T 3ven_A 349 LGAAAAVAVELGD 361 (576)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHcCC
Confidence 9999998766553
No 43
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=95.03 E-value=0.062 Score=52.38 Aligned_cols=63 Identities=17% Similarity=0.065 Sum_probs=50.5
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhc-cccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccC
Q 046958 278 SKAHFARAVLESMCFLVKDVLDSKQKDA-VEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPA 348 (417)
Q Consensus 278 ~~~~l~rAvlEgia~~~~~~~~~l~~~~-g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~ 348 (417)
...++++..++.++-.++..++.+.... ... ++.|+++||+++.+.+.+++++.|+.||.+.+
T Consensus 275 ~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~--------~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~ 338 (377)
T 2ych_A 275 RIYDAIRPVLVELTQELRRSLEFFRIQLEEAS--------PEVGYLLGGGSKLRGLASLLTDTLGVNLEPVN 338 (377)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHC---C--------CSEEEEESGGGGSTTHHHHHHHHHTSEEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC--------cCEEEEECccccchhHHHHHHHHhCCCeEecC
Confidence 3566778888999888888887653211 224 78999999999999999999999999999863
No 44
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=93.59 E-value=0.089 Score=50.24 Aligned_cols=43 Identities=9% Similarity=-0.012 Sum_probs=36.1
Q ss_pred CceEEEecCccccHHHHHHHHHhhCC---cEEccC-CCChhHHHHHHHH
Q 046958 317 EFVLRVDGGATVNNLLMQIQADLLGS---PVLRPA-DIESTALGAAFAA 361 (417)
Q Consensus 317 ~~~i~~~GG~a~s~~~~q~~Adv~g~---pv~~~~-~~e~salGaAllA 361 (417)
++.|+++||+|+- +.+.+.+.++. ++.++. ..++.|+|+++++
T Consensus 273 ~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 273 YTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp CCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred CCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 7899999999974 88999999998 577655 4669999999865
No 45
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=93.55 E-value=0.065 Score=53.49 Aligned_cols=62 Identities=13% Similarity=0.133 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-----ccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccC
Q 046958 279 KAHFARAVLESMCFLVKDVLDSKQKD-----AVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPA 348 (417)
Q Consensus 279 ~~~l~rAvlEgia~~~~~~~~~l~~~-----~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~ 348 (417)
..++++..+|-+.-.++..++...-. .... +..|+++||+|+-+.+.+++++.||+||++..
T Consensus 294 l~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~--------~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~ 360 (419)
T 4a2a_A 294 LSVIIHARLREIMSKSKKFFREVEAKIVEEGEIGI--------PGGVVLTGGGAKIPRINELATEVFKSPVRTGC 360 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCC----------------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCccccccccc--------CCEEEEECchhchhhHHHHHHHHHCCCeEEEe
Confidence 45667788888887777777765310 0122 67899999999999999999999999998755
No 46
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=92.70 E-value=0.62 Score=47.82 Aligned_cols=85 Identities=9% Similarity=0.045 Sum_probs=60.0
Q ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhh---CCcEEccCC---C
Q 046958 277 TSKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLL---GSPVLRPAD---I 350 (417)
Q Consensus 277 ~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~---g~pv~~~~~---~ 350 (417)
.+++++.+++.+.++-.+....+...+..| +++|.++||.+.|..+++.+...+ |.++.+++. .
T Consensus 219 ~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~----------~~~~~~~GGVa~N~~l~~~l~~~~~~~~~~~~~p~~~~~~ 288 (540)
T 3en9_A 219 ERLEDICYSLQEYAFSMLTEITERALAHTN----------KGEVMLVGGVAANNRLREMLKAMCEGQNVDFYVPPKEFCG 288 (540)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHT----------CSEEEEESGGGGCHHHHHHHHHHHHHTTCEEECCCHHHHS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhC----------CCeEEEeCcHHhHHHHHHHHHHHHHhcCCEEEeCCCcCCC
Confidence 468899999988888888777766554455 679999999999999999998876 678888652 3
Q ss_pred -ChhHHHHHHHHHHhcCCCCCH
Q 046958 351 -ESTALGAAFAAGLAIGVFKEE 371 (417)
Q Consensus 351 -e~salGaAllA~~~~G~~~~~ 371 (417)
.++.+|.+-.-....|...++
T Consensus 289 Dngamia~~~~~~~~~g~~s~l 310 (540)
T 3en9_A 289 DNGAMIAWLGLLMHKNGRWMSL 310 (540)
T ss_dssp SCHHHHHHHHHHHHHTCCCCCG
T ss_pred CCHHHHHHHHHHHHHcCCCCcc
Confidence 344455443333334444333
No 47
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=88.15 E-value=1.4 Score=41.16 Aligned_cols=73 Identities=15% Similarity=0.102 Sum_probs=48.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhh-CCcEEccCCCChhHHHHHHH
Q 046958 282 FARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLL-GSPVLRPADIESTALGAAFA 360 (417)
Q Consensus 282 l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~-g~pv~~~~~~e~salGaAll 360 (417)
..+.+++-.+..+...+..+.... + ++.|++.||.++++.+.+.+...+ ..+|..+...+++++|||.+
T Consensus 215 ~a~~il~~~~~~La~~i~~l~~~l--~--------p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~GAa~l 284 (299)
T 2e2o_A 215 VAMDILKQGAELLASQAVYLARKI--G--------TNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDLGKRSPEIGAVIL 284 (299)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH--T--------CSEEEEESGGGGSHHHHHHHHHHHHHTTCEEECCSCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc--C--------CCEEEEECCccCcHHHHHHHHHHCCCCeEeccCCCCChHHHHHHH
Confidence 345566666666666665554432 3 678999999987766666555544 34777765446789999999
Q ss_pred HHHh
Q 046958 361 AGLA 364 (417)
Q Consensus 361 A~~~ 364 (417)
+...
T Consensus 285 a~~~ 288 (299)
T 2e2o_A 285 AYKE 288 (299)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
No 48
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=85.77 E-value=2.2 Score=40.66 Aligned_cols=72 Identities=15% Similarity=0.008 Sum_probs=49.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCC-ChhHHHHH
Q 046958 280 AHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADI-ESTALGAA 358 (417)
Q Consensus 280 ~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~-e~salGaA 358 (417)
.+.++.+++-++-.+...+... +.++ ..++.|+++||+|.- +.+.+.+.++.++.+++.+ .+.|+|+.
T Consensus 251 ~~~i~~~~~e~~~~I~~~i~~~----~~~~-----~~~~~IvltGGGA~l--~~~~l~~~~~~~v~v~~~P~~a~a~G~~ 319 (329)
T 4apw_A 251 STVIKKVKEKFLKDAIKLIEKR----GFKL-----DQLDSLIFIGGTTQK--LKEQISKTYPNNSIITNNSQWTTCEGLY 319 (329)
T ss_dssp THHHHHHHHHHHHHHHHHHHHH----TCCT-----TSCSEEEEESTTHHH--HHHHHHHHSTTCEECCSSGGGHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHc----CCCH-----HHccEEEEECChHHH--HHHHHHHHcCCCCEecCCChhhHHHHHH
Confidence 4555666665555554444433 2221 115789999999974 6689999999889987754 58899988
Q ss_pred HHHH
Q 046958 359 FAAG 362 (417)
Q Consensus 359 llA~ 362 (417)
.++.
T Consensus 320 ~~~~ 323 (329)
T 4apw_A 320 KVAV 323 (329)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 7764
No 49
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=85.61 E-value=1.1 Score=43.10 Aligned_cols=71 Identities=15% Similarity=0.078 Sum_probs=47.1
Q ss_pred HHH-HHHHHHHHHHHHHHHHH-HHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEE---ccCCCChhHH
Q 046958 281 HFA-RAVLESMCFLVKDVLDS-KQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVL---RPADIESTAL 355 (417)
Q Consensus 281 ~l~-rAvlEgia~~~~~~~~~-l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~---~~~~~e~sal 355 (417)
+.+ +.+++-++-.+...++. |++ .... ++.|+++||+|+- +.+++.+.|+.... ..+..++.|+
T Consensus 268 ~~i~~~~i~~~~~~i~~~i~~~l~~-~~~~--------i~~IvL~GGga~l--l~~~l~~~~~~~~i~~~~~~P~~ava~ 336 (346)
T 2fsj_A 268 PEVSGPILEDLANRIIENIRLNLRG-EVDR--------VTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANAL 336 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGG-GGGG--------EEEEEEESTTHHH--HGGGGGGGSTTCBCCCCTTTTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-hhhc--------ccEEEEECCcHHH--HHHHHHHHCcCcEEeccCCCcHHHHHH
Confidence 444 55666666666555544 443 2223 7889999999985 78888999985433 3234578999
Q ss_pred HHHHHHH
Q 046958 356 GAAFAAG 362 (417)
Q Consensus 356 GaAllA~ 362 (417)
|+..++.
T Consensus 337 G~~~~~~ 343 (346)
T 2fsj_A 337 GYRDAAE 343 (346)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 9987653
No 50
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=83.65 E-value=5 Score=37.44 Aligned_cols=73 Identities=10% Similarity=0.004 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhC------CcEEccC-CCChhHH
Q 046958 283 ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLG------SPVLRPA-DIESTAL 355 (417)
Q Consensus 283 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g------~pv~~~~-~~e~sal 355 (417)
.+.+++-.+..+...+..+... .+ ++.|++.||.++.+.+.+.+-+.+. .+|+... ..+++++
T Consensus 214 a~~~~~~~~~~La~~i~~l~~~--~~--------p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~ 283 (297)
T 4htl_A 214 SERLITEFYTGICTGLYNLIYL--FD--------PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLL 283 (297)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HC--------CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--hC--------CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHH
Confidence 4555666666666555555432 23 6789999999886656555444442 2455544 3568999
Q ss_pred HHHHHHHHhc
Q 046958 356 GAAFAAGLAI 365 (417)
Q Consensus 356 GaAllA~~~~ 365 (417)
|||.++....
T Consensus 284 GAa~l~~~~~ 293 (297)
T 4htl_A 284 GAVYHFLQEE 293 (297)
T ss_dssp HHHHHHHHHH
T ss_pred hHHHHHHHHh
Confidence 9999887543
No 51
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=81.87 E-value=5.1 Score=38.02 Aligned_cols=75 Identities=16% Similarity=0.038 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCc--------eEEEecCcccc-HHHHHHH----HHhh-------C
Q 046958 282 FARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEF--------VLRVDGGATVN-NLLMQIQ----ADLL-------G 341 (417)
Q Consensus 282 l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~--------~i~~~GG~a~s-~~~~q~~----Adv~-------g 341 (417)
.++.+++-.+..+...+..+... .+ ++ .|++.||.+++ +.+.+.+ .+.. .
T Consensus 233 ~a~~il~~~~~~La~~i~~l~~~--~~--------p~~~~~~~~~~IvlgGgv~~~~~~~~~~~~~~l~~~~~~~~~~~~ 302 (347)
T 2ch5_A 233 LSRYIFRKAGEMLGRHIVAVLPE--ID--------PVLFQGKIGLPILCVGSVWKSWELLKEGFLLALTQGREIQAQNFF 302 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGG--SC--------GGGGCSTTCEEEEEESGGGGGHHHHHHHHHHHHHHHC---CCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--hc--------ccccccCCCceEEEECCcccCcHHHHHHHHHHHHhhccccccccC
Confidence 34556666666666666665542 23 45 78888888764 5444333 2221 2
Q ss_pred CcEEccCCCChhHHHHHHHHHHhcC
Q 046958 342 SPVLRPADIESTALGAAFAAGLAIG 366 (417)
Q Consensus 342 ~pv~~~~~~e~salGaAllA~~~~G 366 (417)
.+|++....+++++|||.++....+
T Consensus 303 ~~i~~~~~~~a~~~GAa~la~~~~~ 327 (347)
T 2ch5_A 303 SSFTLMKLRHSSALGGASLGARHIG 327 (347)
T ss_dssp SEEEEEEESSCTHHHHHHHHHHTTT
T ss_pred CceEEEecCCChHHHHHHHHHHhcC
Confidence 3566555455899999999977654
No 52
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=81.86 E-value=4.9 Score=37.92 Aligned_cols=71 Identities=14% Similarity=0.047 Sum_probs=44.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCcccc-HHHHHHHHHhh----------CCcEEccCC-C
Q 046958 283 ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVN-NLLMQIQADLL----------GSPVLRPAD-I 350 (417)
Q Consensus 283 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s-~~~~q~~Adv~----------g~pv~~~~~-~ 350 (417)
.+.+++-.+..+...+..+... .+ ++.|++.||.++. +.+.+.+-+.+ ..+|+.... .
T Consensus 237 a~~~~~~~~~~La~~i~~l~~~--ld--------P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~ 306 (321)
T 3r8e_A 237 ALAVWADIGTIIGESLVNIVRV--MD--------LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLEN 306 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HC--------CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--HC--------CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCC
Confidence 3455666666666666555543 23 6789999999875 55554443322 234555543 4
Q ss_pred ChhHHHHHHHHHH
Q 046958 351 ESTALGAAFAAGL 363 (417)
Q Consensus 351 e~salGaAllA~~ 363 (417)
+++++|||.++..
T Consensus 307 ~a~~~GAa~l~~~ 319 (321)
T 3r8e_A 307 DAGLLGAAGLIME 319 (321)
T ss_dssp GHHHHHHHHHHHC
T ss_pred cHHHHHHHHHHHh
Confidence 6889999998863
No 53
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=80.32 E-value=7.5 Score=35.85 Aligned_cols=71 Identities=14% Similarity=0.031 Sum_probs=42.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhh------------CCcEEccC-C
Q 046958 283 ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLL------------GSPVLRPA-D 349 (417)
Q Consensus 283 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~------------g~pv~~~~-~ 349 (417)
.+.+++-.+..+...+..+.... + ++.|++.||.+.++.+.+.+...+ ..+|+... .
T Consensus 204 a~~i~~~~~~~L~~~i~~l~~~l--~--------p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~ 273 (292)
T 2gup_A 204 CQEAIERMNRNLAQGLLNIQYLI--D--------PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYH 273 (292)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--C--------CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--C--------CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccC
Confidence 34455555555555555554322 3 578989898877666554333222 24566554 3
Q ss_pred CChhHHHHHHHHHH
Q 046958 350 IESTALGAAFAAGL 363 (417)
Q Consensus 350 ~e~salGaAllA~~ 363 (417)
.++.++|||.++..
T Consensus 274 ~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 274 ADANLYGALVNWLQ 287 (292)
T ss_dssp TTHHHHHHHHHHHH
T ss_pred ChhhHHHHHHHHHH
Confidence 56789999998864
No 54
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=80.15 E-value=4.6 Score=37.26 Aligned_cols=70 Identities=14% Similarity=0.187 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhC-------CcEEccC-CCChhH
Q 046958 283 ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLG-------SPVLRPA-DIESTA 354 (417)
Q Consensus 283 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g-------~pv~~~~-~~e~sa 354 (417)
.+.+++-.+..+...+..+.... + ++.|++.||.+.++.+.+.+...+. .+|+... ..++++
T Consensus 210 a~~i~~~~~~~L~~~i~~l~~~l--~--------p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~ 279 (289)
T 2aa4_A 210 AQQLIHRSARTLARLIADIKATT--D--------CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGL 279 (289)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--C--------CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--C--------CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHH
Confidence 34455555555555555554322 3 5778888888866666655544433 2455544 356889
Q ss_pred HHHHHHHH
Q 046958 355 LGAAFAAG 362 (417)
Q Consensus 355 lGaAllA~ 362 (417)
+|||.++.
T Consensus 280 ~GAa~l~~ 287 (289)
T 2aa4_A 280 LGAALLAQ 287 (289)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 99999874
No 55
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=79.87 E-value=5.1 Score=40.13 Aligned_cols=49 Identities=8% Similarity=0.095 Sum_probs=35.0
Q ss_pred ceEEEecCccccHHHHHHH----HHhh--------CCcEEccCCCChhHHHHHHHHHHhcC
Q 046958 318 FVLRVDGGATVNNLLMQIQ----ADLL--------GSPVLRPADIESTALGAAFAAGLAIG 366 (417)
Q Consensus 318 ~~i~~~GG~a~s~~~~q~~----Adv~--------g~pv~~~~~~e~salGaAllA~~~~G 366 (417)
..|.+.||..+-+.+.+.+ .+++ +.+|.+....+++.+|||++|+.+..
T Consensus 385 ~~V~vdGsv~~~p~f~~~l~~~l~~l~~~~~~~~~~~~v~~~~~~dgsg~GAAl~aa~~~~ 445 (457)
T 2yhx_A 385 GHIAAXGSXRSYSGFSXNSATXNXNIYGWPQSAXXSKPIXITPAIDGXGAASXVIXSIASA 445 (457)
T ss_dssp EEEEEESTTTTSTTHHHHHHHHHHHHHCCCCSSGGGSSEEEEECCCTTTHHHHHHHHHHHH
T ss_pred EEEEEECCcccCchHHHHHHHHHHHhhCcccccccCcceEEEECCCchhhhHHHHHHHHhh
Confidence 4567777773345555544 4666 34688877899999999999998853
No 56
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=78.89 E-value=3.4 Score=45.26 Aligned_cols=84 Identities=17% Similarity=0.074 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCcccc-HHHHHHHH----Hhh-CCcEEccCCCChhHH
Q 046958 282 FARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVN-NLLMQIQA----DLL-GSPVLRPADIESTAL 355 (417)
Q Consensus 282 l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s-~~~~q~~A----dv~-g~pv~~~~~~e~sal 355 (417)
+.++|++=.+..+...+-.+....+.+|. .......|.+.||.+++ +.+.+.+. +.+ ...+++....+++.+
T Consensus 374 ~a~~v~~raa~llA~gia~ii~~l~~dp~--~~~~~~~IvigGgV~~~~~~~~~~l~~~l~~~~~~~~~~i~~a~dgs~~ 451 (917)
T 1cza_N 374 VCTIVSFRSANLVAATLGAILNRLRDNKG--TPRLRTTVGVDGSLYKTHPQYSRRFHKTLRRLVPDSDVRFLLSESGSGK 451 (917)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHT--CSSEEEEEEEECHHHHHCSSHHHHHHHHHHHHCTTEEEEEEECTTCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCc--ccCcceEEEECCchhhccHHHHHHHHHHHHHhcCCCceEEEEeccchHH
Confidence 66677666666555555444332211200 00001345555666665 55544433 332 234555556899999
Q ss_pred HHHHHHHHhcCC
Q 046958 356 GAAFAAGLAIGV 367 (417)
Q Consensus 356 GaAllA~~~~G~ 367 (417)
|||++|+.+...
T Consensus 452 GAA~laa~~~~l 463 (917)
T 1cza_N 452 GAAMVTAVAYRL 463 (917)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHhHhhh
Confidence 999999998764
No 57
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=77.87 E-value=12 Score=35.38 Aligned_cols=70 Identities=14% Similarity=0.050 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHH----HHHh-h----CCcEEccCCCChh
Q 046958 283 ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQI----QADL-L----GSPVLRPADIEST 353 (417)
Q Consensus 283 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~----~Adv-~----g~pv~~~~~~e~s 353 (417)
++.+++-.+..+...+..+... .+ ++.|++.||.+. .+.+. +... + ..+|+.....+++
T Consensus 261 a~~il~~~~~~La~~i~~l~~~--l~--------P~~IvlgG~i~~--~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~~ 328 (343)
T 2yhw_A 261 AQSILRTAGTALGLGVVNILHT--MN--------PSLVILSGVLAS--HYIHIVKDVIRQQALSSVQDVDVVVSDLVDPA 328 (343)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--TC--------CSEEEEESTTHH--HHHHHHHHHHHHHSCGGGTTCEEEECCCSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--hC--------CCEEEEeCCcHH--HHHHHHHHHHHHhcccccCCcEEEEccCCCch
Confidence 4556666666666666665543 23 678888888763 33332 2222 1 3467766656788
Q ss_pred HHHHHHHHHHh
Q 046958 354 ALGAAFAAGLA 364 (417)
Q Consensus 354 alGaAllA~~~ 364 (417)
++|||.++...
T Consensus 329 ~~GAa~l~~~~ 339 (343)
T 2yhw_A 329 LLGAASMVLDY 339 (343)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999988654
No 58
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=77.68 E-value=7.2 Score=36.52 Aligned_cols=72 Identities=18% Similarity=0.244 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccc-cHHHHHHHHHhh----------CCcEEccC-C
Q 046958 282 FARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATV-NNLLMQIQADLL----------GSPVLRPA-D 349 (417)
Q Consensus 282 l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~-s~~~~q~~Adv~----------g~pv~~~~-~ 349 (417)
..+.+++-.+..+...+..+.... + ++.|++.||.++ ++.+.+.+...+ ..+|+... .
T Consensus 238 ~a~~i~~~~~~~L~~~i~~l~~~l--~--------p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~ 307 (326)
T 2qm1_A 238 FALMVVDRVCFYLGLATGNLGNTL--N--------PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELG 307 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH--C--------CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc--C--------CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcC
Confidence 345566666666666666555432 3 578999999986 566554443322 24556554 3
Q ss_pred CChhHHHHHHHHHH
Q 046958 350 IESTALGAAFAAGL 363 (417)
Q Consensus 350 ~e~salGaAllA~~ 363 (417)
.+++++|||.++..
T Consensus 308 ~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 308 NEAGVIGAASLALQ 321 (326)
T ss_dssp GGHHHHHHHHHGGG
T ss_pred chHHHHHHHHHHHH
Confidence 45789999998753
No 59
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=76.20 E-value=6.5 Score=37.18 Aligned_cols=69 Identities=14% Similarity=0.164 Sum_probs=41.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhC---------CcEEccCC-CChh
Q 046958 284 RAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLG---------SPVLRPAD-IEST 353 (417)
Q Consensus 284 rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g---------~pv~~~~~-~e~s 353 (417)
+.+++-.+..+...+..+... .+ ++.|++.||.++.+.+.+.+.+.+. .+|+.... .+++
T Consensus 247 ~~~~~~~~~~La~~i~~l~~~--l~--------p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~ 316 (327)
T 4db3_A 247 AEHVERFMELLAICFGNIFTA--ND--------PHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGG 316 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH--HC--------CSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHH
T ss_pred HHHHHHHHHHHHHHHHHHHHH--hC--------CCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHH
Confidence 445555555555555555432 23 6788898988887666554444332 23444443 5688
Q ss_pred HHHHHHHHH
Q 046958 354 ALGAAFAAG 362 (417)
Q Consensus 354 alGaAllA~ 362 (417)
++|||.++.
T Consensus 317 ~~GAa~l~l 325 (327)
T 4db3_A 317 VRGAAFLNI 325 (327)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHHHHh
Confidence 999998764
No 60
>1sz2_A Glucokinase, glucose kinase; ATP-dependent, glucose binding, transferase; HET: MSE BGC; 2.20A {Escherichia coli} SCOP: c.55.1.7 PDB: 1q18_A*
Probab=75.97 E-value=9.7 Score=35.99 Aligned_cols=49 Identities=16% Similarity=0.172 Sum_probs=31.0
Q ss_pred Cce-EEEecCcccc--HH-----HHHHHHH--h-----hCCcEEccCCCChhHHHHHHHHHHhc
Q 046958 317 EFV-LRVDGGATVN--NL-----LMQIQAD--L-----LGSPVLRPADIESTALGAAFAAGLAI 365 (417)
Q Consensus 317 ~~~-i~~~GG~a~s--~~-----~~q~~Ad--v-----~g~pv~~~~~~e~salGaAllA~~~~ 365 (417)
++. |++.||.+.. +. +++.+.+ . -..||+.....++..+|||.++...+
T Consensus 265 P~~gvvigGGi~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~a~l~GAa~l~~~~~ 328 (332)
T 1sz2_A 265 TFGGVFIAGGIVPRFLEFFKASGFRAAFEDKGRFKEYVHDIPVYLIVHDNPGLLGSGAHLRQTL 328 (332)
T ss_dssp CTTEEEEECSSSGGGHHHHHHSSHHHHHHCCGGGHHHHTTCCEEEECCSCHHHHHHHHHHHHHT
T ss_pred CCeEEEEEChhhhhHHHHhccHHHHHHHHhcCchhhHHhCceEEEEECCchhHHHHHHHHHHhh
Confidence 565 8899999864 22 2233321 1 14567665566789999999886543
No 61
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=74.95 E-value=8.4 Score=36.24 Aligned_cols=73 Identities=16% Similarity=0.103 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCcccc-HHHHHHHHHhh-----------CCcEEccC-C
Q 046958 283 ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVN-NLLMQIQADLL-----------GSPVLRPA-D 349 (417)
Q Consensus 283 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s-~~~~q~~Adv~-----------g~pv~~~~-~ 349 (417)
.+.+++-.+..+...+..+... .+ ++.|++.||.+++ +.+.+.+-+.+ ..+|+... .
T Consensus 229 a~~~~~~~~~~La~~i~~l~~~--l~--------p~~IvlgGgi~~~~~~l~~~l~~~l~~~~~~~~~~~~~~i~~s~l~ 298 (321)
T 3vgl_A 229 AVDSFRELARWAGAGLADLASL--FD--------PSAFIVGGGVSDEGELVLDPIRKSFRRWLIGGEWRPHAQVLAAQLG 298 (321)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH--HC--------CSEEEEESGGGGGTHHHHHHHHHHHHHHCTTGGGSCCCEEEECTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHH--hC--------CCEEEEeChhhcchHHHHHHHHHHHHHhcccccccCCCEEEECCCC
Confidence 4456666666666666655543 23 6789999998875 55444332222 12455555 3
Q ss_pred CChhHHHHHHHHHHhc
Q 046958 350 IESTALGAAFAAGLAI 365 (417)
Q Consensus 350 ~e~salGaAllA~~~~ 365 (417)
.+++++|||.++..++
T Consensus 299 ~~a~l~GAa~l~~~~~ 314 (321)
T 3vgl_A 299 GKAGLVGAADLARQGL 314 (321)
T ss_dssp GGHHHHHHHHHHHTC-
T ss_pred CcHHHHHHHHHHHhhh
Confidence 6789999999887654
No 62
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=74.47 E-value=7.9 Score=37.59 Aligned_cols=71 Identities=17% Similarity=0.173 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHH-HHHHHHHhhCC--cEEc--cCCC-ChhHHH
Q 046958 283 ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNL-LMQIQADLLGS--PVLR--PADI-ESTALG 356 (417)
Q Consensus 283 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~-~~q~~Adv~g~--pv~~--~~~~-e~salG 356 (417)
.+.+++-.+..+...+..+....+.+ ++.|++.||.+++.. +.+.+.+.+.. |+.+ .... ++.++|
T Consensus 270 a~~~l~~~~~~la~~i~~l~~~l~~~--------p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~G 341 (381)
T 1saz_A 270 AKRVYRAMAYQIAKWIGKMAAVLKGE--------VDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALS 341 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTC--------CSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC--------CCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHH
Confidence 45567777777777776665543124 689999999987543 55555544432 4433 3332 378899
Q ss_pred HHHHH
Q 046958 357 AAFAA 361 (417)
Q Consensus 357 aAllA 361 (417)
||.++
T Consensus 342 Aa~l~ 346 (381)
T 1saz_A 342 ALRVL 346 (381)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98876
No 63
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=74.13 E-value=6.7 Score=39.57 Aligned_cols=88 Identities=16% Similarity=0.119 Sum_probs=52.0
Q ss_pred EcCCCCCCHHHHHHHHHHHHHHHHHHHH----HHHHhhccccccccCCCCCceEEEecCccc-cHHHHH----HHHHhh-
Q 046958 271 IGITRFTSKAHFARAVLESMCFLVKDVL----DSKQKDAVEKGVIKDAKPEFVLRVDGGATV-NNLLMQ----IQADLL- 340 (417)
Q Consensus 271 ~Gl~~~~~~~~l~rAvlEgia~~~~~~~----~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~-s~~~~q----~~Adv~- 340 (417)
+|+........++|-|++.|.-.....+ -.+-...+.+ .-.|-+.|+..+ .|.+.+ .+.+++
T Consensus 368 l~~~~t~~d~~~vr~i~~~V~~RAA~L~Aa~iaail~~~~~~--------~~~VgvdGSv~~~~P~f~~~~~~~l~~ll~ 439 (485)
T 3o8m_A 368 LNIETTVVERKLIRKLAELVGTRAARLTVCGVSAICDKRGYK--------TAHIAADGSVFNRYPGYKEKAAQALKDIYN 439 (485)
T ss_dssp HCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCS--------SEEEEEESHHHHHSTTHHHHHHHHHHHHHT
T ss_pred hCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--------ceEEEEecChhccCccHHHHHHHHHHHHhc
Confidence 3454322334456777777766544332 2222223433 333555788764 555555 444445
Q ss_pred -------CCcEEccCCCChhHHHHHHHHHHhcC
Q 046958 341 -------GSPVLRPADIESTALGAAFAAGLAIG 366 (417)
Q Consensus 341 -------g~pv~~~~~~e~salGaAllA~~~~G 366 (417)
+.+|.+....+++.+|||++|+++..
T Consensus 440 ~~~~~~~~~~v~l~~a~DGSg~GAAliAa~a~~ 472 (485)
T 3o8m_A 440 WDVEKMEDHPIQLVAAEDGSGVGAAIIACLTQK 472 (485)
T ss_dssp CCCCSGGGCSEEEEECCCTTTHHHHHHHHHHHH
T ss_pred cccccCCCceEEEEEcCCChHHHHHHHHHHHHH
Confidence 36688877899999999999998863
No 64
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=71.72 E-value=19 Score=34.68 Aligned_cols=73 Identities=10% Similarity=-0.116 Sum_probs=43.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCcccc-HHHHHHHHHhh--------CCcEEccC-CCC
Q 046958 282 FARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVN-NLLMQIQADLL--------GSPVLRPA-DIE 351 (417)
Q Consensus 282 l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s-~~~~q~~Adv~--------g~pv~~~~-~~e 351 (417)
.++.+++-.+..+...+..+.... + ++.|++.||.++. +.+.+.+...+ ..+|+... ..+
T Consensus 290 ~a~~~l~~~~~~La~~i~~l~~~l--d--------P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~ 359 (380)
T 2hoe_A 290 RVKEYFDDIARYFSIGLLNLIHLF--G--------ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEP 359 (380)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH--C--------CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--C--------CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCc
Confidence 345556665555555555554322 3 5789999998864 55544443322 23466554 346
Q ss_pred hhHHHHHHHHHHh
Q 046958 352 STALGAAFAAGLA 364 (417)
Q Consensus 352 ~salGaAllA~~~ 364 (417)
+.++|||.++...
T Consensus 360 a~~~GAa~l~~~~ 372 (380)
T 2hoe_A 360 VIAFGAAVHALEN 372 (380)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 7999999988643
No 65
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=71.66 E-value=2.9 Score=40.45 Aligned_cols=46 Identities=15% Similarity=0.129 Sum_probs=36.6
Q ss_pred CceEEEecCccccHHHHHHHHHhhC--------CcEEcc-CCCChhHHHHHHHHH
Q 046958 317 EFVLRVDGGATVNNLLMQIQADLLG--------SPVLRP-ADIESTALGAAFAAG 362 (417)
Q Consensus 317 ~~~i~~~GG~a~s~~~~q~~Adv~g--------~pv~~~-~~~e~salGaAllA~ 362 (417)
.+.|+++||.++-+-+.+.+.+.++ .+|..+ +...++.+|++++|.
T Consensus 294 ~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 294 YANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred HhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 4679999999999999998888776 334433 346789999999996
No 66
>1bdg_A Hexokinase; phosphotransferase; HET: GLC; 2.60A {Schistosoma mansoni} SCOP: c.55.1.3 c.55.1.3
Probab=71.34 E-value=6.4 Score=39.36 Aligned_cols=74 Identities=14% Similarity=0.097 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCc--eEEEecCccc-cHHHHHHHH----Hhh--CCcEEccCCCCh
Q 046958 282 FARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEF--VLRVDGGATV-NNLLMQIQA----DLL--GSPVLRPADIES 352 (417)
Q Consensus 282 l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~--~i~~~GG~a~-s~~~~q~~A----dv~--g~pv~~~~~~e~ 352 (417)
+.++|++=.|..+...+-.+-...+ .+ .|.+.||..+ .+.+.+.+. +.+ ..+|.+....++
T Consensus 366 va~~V~~RaA~lla~~ia~i~~~~~----------~~~~~V~i~Ggv~~~~~~~~~~l~~~l~~~~~~~~~i~~~l~~dg 435 (451)
T 1bdg_A 366 ACEMVVKRAAYLAGAGIACILRRIN----------RSEVTVGVDGSLYKFHPKFCERMTDMVDKLKPKNTRFCLRLSEDG 435 (451)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC----------CSEEEEEEESHHHHHCTTHHHHHHHHHHHHSCTTCEEEEEECTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhC----------CCceEEEEeCchhcCchhHHHHHHHHHHHHhCCCCcEEEEECCCc
Confidence 4555555555555555544433233 34 4555566654 455544333 333 456776667889
Q ss_pred hHHHHHHHHHHhc
Q 046958 353 TALGAAFAAGLAI 365 (417)
Q Consensus 353 salGaAllA~~~~ 365 (417)
+.+|||++|+.+.
T Consensus 436 s~iGAAllA~~~~ 448 (451)
T 1bdg_A 436 SGKGAAAIAASCT 448 (451)
T ss_dssp HHHHHHHHHTTC-
T ss_pred cHHHHHHHHHHHh
Confidence 9999999997653
No 67
>3htv_A D-allose kinase, allokinase; NP_418508.1, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: MSE; 1.95A {Escherichia coli k-12}
Probab=69.23 E-value=23 Score=33.05 Aligned_cols=69 Identities=17% Similarity=0.173 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccH-----HHHHHHHHhhC-------CcEEccC-
Q 046958 282 FARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNN-----LLMQIQADLLG-------SPVLRPA- 348 (417)
Q Consensus 282 l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~-----~~~q~~Adv~g-------~pv~~~~- 348 (417)
.++.+++-++..+..++..+ + ++.|++.||.++.. .+.+.+...+. .+|+...
T Consensus 219 ~~~~~~~~~a~~la~l~~~~------d--------P~~IvlgG~v~~~~~~~~~~l~~~l~~~~~~~~~~~~~~i~~s~l 284 (310)
T 3htv_A 219 FVQSLLENAARAIATSINLF------D--------PDAVILGGGVMDMPAFPRETLVAMTQKYLRRPLPHQVVRFIAASS 284 (310)
T ss_dssp HHHHHHHHHHHHHHHHHHHH------C--------CSEEEEECTTTTSTTCCHHHHHHHHHHTSCTTTTTTTCEEEECCC
T ss_pred HHHHHHHHHHHHHHHHHHhh------C--------CCEEEEeCchhccchhHHHHHHHHHHHHhhcccccCCcEEEEcCC
Confidence 45566666666555444332 3 67899999888652 34444433332 2344443
Q ss_pred CCChhHHHHHHHHHHh
Q 046958 349 DIESTALGAAFAAGLA 364 (417)
Q Consensus 349 ~~e~salGaAllA~~~ 364 (417)
..+++++|||.++...
T Consensus 285 g~~ag~~GAa~la~~~ 300 (310)
T 3htv_A 285 SDFNGAQGAAILAHQR 300 (310)
T ss_dssp CTTHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHHHHH
Confidence 3578999999998654
No 68
>3hm8_A Hexokinase-3; glucose, glucose-6-phosphate, non-protein kinase, structural genomics consortium, SGC, A enzyme, ATP-binding, glycolysis; HET: GLC BG6; 2.80A {Homo sapiens}
Probab=68.19 E-value=8.9 Score=38.21 Aligned_cols=48 Identities=19% Similarity=0.155 Sum_probs=34.0
Q ss_pred eEEEecCccc-cHHHHHHHHHhh----C-CcEEccCCCChhHHHHHHHHHHhcC
Q 046958 319 VLRVDGGATV-NNLLMQIQADLL----G-SPVLRPADIESTALGAAFAAGLAIG 366 (417)
Q Consensus 319 ~i~~~GG~a~-s~~~~q~~Adv~----g-~pv~~~~~~e~salGaAllA~~~~G 366 (417)
.|-+.|+.-+ -|.+.+.+...+ + .+|.+....+++.+|||++||++..
T Consensus 386 ~VgvDGsvy~~~P~f~~~l~~~l~~l~~~~~v~~~~s~DGSg~GAAl~AA~a~~ 439 (445)
T 3hm8_A 386 SVGVDGTLYKLHPRFSSLVAATVRELAPRCVVTFLQSEDGSGKGAALVTAVACR 439 (445)
T ss_dssp EEEEECHHHHHCTTHHHHHHHHHHHHCTTEEEEEEECSSCHHHHHHHHHHHHHH
T ss_pred EEEEeceehccChhHHHHHHHHHHHhCCCCcEEEEECCCCchHHHHHHHHHHHH
Confidence 4556677753 566655554443 3 5677777889999999999998753
No 69
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=67.71 E-value=11 Score=37.86 Aligned_cols=49 Identities=16% Similarity=0.135 Sum_probs=35.8
Q ss_pred eEEEecCccc-cHHHHHHHHHhh-----CCcEEccCCCChhHHHHHHHHHHhcCC
Q 046958 319 VLRVDGGATV-NNLLMQIQADLL-----GSPVLRPADIESTALGAAFAAGLAIGV 367 (417)
Q Consensus 319 ~i~~~GG~a~-s~~~~q~~Adv~-----g~pv~~~~~~e~salGaAllA~~~~G~ 367 (417)
.|-+.|+.-+ .|.+.+.+...+ +++|.+....+++.+|||++|+++...
T Consensus 410 ~VgvDGsv~~~yp~f~~~~~~~l~~l~~~~~v~l~~a~DGSg~GAAliAa~a~~~ 464 (470)
T 3f9m_A 410 TVGVDGSVYKLHPSFKERFHASVRRLTPSCEITFIESEEGSGRGAALVSAVACKK 464 (470)
T ss_dssp EEEEECHHHHHCTTHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHHHHTC-
T ss_pred EEEEeccHHHhCchHHHHHHHHHHHHcCCCeEEEEEcCCCcHHHHHHHHHHHHHH
Confidence 4666677754 676666555553 467888778999999999999998653
No 70
>1zbs_A Hypothetical protein PG1100; alpha-beta protein., structural genomics, PSI, protein struc initiative; 2.30A {Porphyromonas gingivalis} SCOP: c.55.1.5 c.55.1.5
Probab=66.70 E-value=8.9 Score=35.51 Aligned_cols=73 Identities=7% Similarity=-0.108 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCcccc--HHHHHHHHHhhCCcEEccCCCChhHHHHH
Q 046958 281 HFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVN--NLLMQIQADLLGSPVLRPADIESTALGAA 358 (417)
Q Consensus 281 ~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s--~~~~q~~Adv~g~pv~~~~~~e~salGaA 358 (417)
..++.+++-.+..+...+ .+.- -.+ +..|++.||.+++ +.+.+.+.... .++..+ .++...||+
T Consensus 210 ~~A~~i~~~~~~~La~~i-~~~~--~~~--------p~~vvlgGGv~~~~~~~l~~~l~~~~-~~i~~~--~~a~~~GA~ 275 (291)
T 1zbs_A 210 PAVYSLVQNSFDDFLVRN-VLRY--NRP--------DLPLHFIGSVAFHYREVLSSVIKKRG-LTLGSV--LQSPMEGLI 275 (291)
T ss_dssp HHHHHHHHHHHHHHHHHH-TGGG--CCT--------TSCEEEESHHHHHTHHHHHHHHHHTT-CCEEEE--ESCSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH-hccc--CCC--------CceEEEECchHHhhHHHHHHHHHHcC-Ceeccc--CcCHHHHHH
Confidence 567777877777777777 3321 114 6789999999887 44444444422 344443 378999999
Q ss_pred HHHHHhcCC
Q 046958 359 FAAGLAIGV 367 (417)
Q Consensus 359 llA~~~~G~ 367 (417)
.+|....++
T Consensus 276 ~la~~~~~~ 284 (291)
T 1zbs_A 276 QYHHNNHVL 284 (291)
T ss_dssp HHHHHCCC-
T ss_pred HHHHhhhhh
Confidence 999765543
No 71
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=64.05 E-value=13 Score=34.52 Aligned_cols=72 Identities=24% Similarity=0.156 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCcc-cc-HHHHHHHHHhhC--------CcEEccCC-CC
Q 046958 283 ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGAT-VN-NLLMQIQADLLG--------SPVLRPAD-IE 351 (417)
Q Consensus 283 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a-~s-~~~~q~~Adv~g--------~pv~~~~~-~e 351 (417)
.+.+++-.+..+...+..+.... + ++.|++.||.+ +. +.+.+.+.+.+. .+|+.... .+
T Consensus 214 a~~~~~~~~~~l~~~i~~l~~~~--~--------p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~ 283 (302)
T 3vov_A 214 AERLVLQAARYVGIGLASLVKAF--D--------PGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAE 283 (302)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--C--------CSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--C--------CCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCc
Confidence 45566666666666666555432 3 67888888888 64 555554433322 22555443 56
Q ss_pred hhHHHHHHHHHHh
Q 046958 352 STALGAAFAAGLA 364 (417)
Q Consensus 352 ~salGaAllA~~~ 364 (417)
++++|||.++...
T Consensus 284 a~~~GAa~l~~~~ 296 (302)
T 3vov_A 284 AGLLGAALTAYLE 296 (302)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 8899999998754
No 72
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=63.47 E-value=29 Score=33.92 Aligned_cols=71 Identities=8% Similarity=0.010 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccc-cHHHHHHHHHhh----------CCcEEccCC-C
Q 046958 283 ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATV-NNLLMQIQADLL----------GSPVLRPAD-I 350 (417)
Q Consensus 283 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~-s~~~~q~~Adv~----------g~pv~~~~~-~ 350 (417)
++.+++-.+..+...+..+.... + ++.|++.||.++ .+.+.+.+...+ ..+|+.... .
T Consensus 334 a~~il~~~~~~L~~~i~~l~~~l--d--------P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~I~~s~l~~ 403 (429)
T 1z05_A 334 AVDVIQQLGRYLGAAIAIVINLF--N--------PEKILIGGVINQAKSILYPSIEQCIREQSLPVYHQDLKLVESRFYK 403 (429)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--C--------CSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--C--------CCEEEEeCccccchHHHHHHHHHHHHHhcccccCCCcEEEEecCCC
Confidence 44555666666666655554432 3 678888888876 344443332211 345666543 4
Q ss_pred ChhHHHHHHHHHHh
Q 046958 351 ESTALGAAFAAGLA 364 (417)
Q Consensus 351 e~salGaAllA~~~ 364 (417)
+ +++|||.++...
T Consensus 404 ~-~~~GAa~l~~~~ 416 (429)
T 1z05_A 404 Q-ATMPGAALIKQA 416 (429)
T ss_dssp C-TTHHHHHHHHHH
T ss_pred c-cHHHHHHHHHHH
Confidence 5 999999988654
No 73
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=61.74 E-value=29 Score=33.57 Aligned_cols=69 Identities=14% Similarity=0.152 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccc-cHHHHHHHHHhh----------CCcEEccC-CC
Q 046958 283 ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATV-NNLLMQIQADLL----------GSPVLRPA-DI 350 (417)
Q Consensus 283 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~-s~~~~q~~Adv~----------g~pv~~~~-~~ 350 (417)
++.+++-.+..+...+..+.... + ++.|++.||.++ .+.+.+.+.+.+ ..+|+... ..
T Consensus 311 a~~~l~~~~~~L~~~i~~l~~~l--d--------P~~IvlgG~i~~~~~~l~~~i~~~l~~~~~~~~~~~~~i~~s~l~~ 380 (406)
T 1z6r_A 311 AKDIITGVGAHVGRILAIMVNLF--N--------PQKILIGSPLSKAADILFPVISDSIRQQALPAYSQHISVESTQFSN 380 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--C--------CSEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHhc--C--------CCEEEEeCccchhhHHHHHHHHHHHHHhcccccCCCcEEEEeCCCC
Confidence 34555666666665555554432 3 578888898876 455554333222 34566654 45
Q ss_pred ChhHHHHHHHH
Q 046958 351 ESTALGAAFAA 361 (417)
Q Consensus 351 e~salGaAllA 361 (417)
+++++|||++.
T Consensus 381 ~a~~~GAa~~~ 391 (406)
T 1z6r_A 381 QGTMAGAALVK 391 (406)
T ss_dssp CTTTTHHHHHH
T ss_pred hHHHHHHHHHH
Confidence 68999997754
No 74
>2q2r_A Glucokinase 1, putative; ATPase hexose kinase family, transferase; HET: BGC ADP; 2.10A {Trypanosoma cruzi}
Probab=60.78 E-value=24 Score=33.81 Aligned_cols=71 Identities=11% Similarity=0.018 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecC-ccccHHHHH------HHHHh-h-----------CCc
Q 046958 283 ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGG-ATVNNLLMQ------IQADL-L-----------GSP 343 (417)
Q Consensus 283 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG-~a~s~~~~q------~~Adv-~-----------g~p 343 (417)
.+.+++-.+..+...+..+.... + ++.|++.|| .++++.+.+ .+... + ..|
T Consensus 281 a~~~l~~~~~~L~~~i~~l~~~l--~--------p~~IvlgGG~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~~~~~ 350 (373)
T 2q2r_A 281 ACKAMKKYHEYLMRVGSEASMAL--L--------PLTIVLVGDNIVNNAFFYRNPQNLKEMHHEALNHEMERFGFQSRVS 350 (373)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--C--------CSEEEECSHHHHHTHHHHHSHHHHHHHHHHHTCSGGGGGTSGGGCE
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH--C--------CCEEEEeCChHhCchhhhcchhHHHHHHHHHhhcccchhhhhcCCc
Confidence 44555555555555555554322 3 566777777 566655544 22222 2 245
Q ss_pred EEccC-CCChhHHHHHHHHHH
Q 046958 344 VLRPA-DIESTALGAAFAAGL 363 (417)
Q Consensus 344 v~~~~-~~e~salGaAllA~~ 363 (417)
|++.. ..+++++|||.++..
T Consensus 351 i~~~~~~~~a~l~GAa~l~~~ 371 (373)
T 2q2r_A 351 YLRQKKLLNLNLMGCYRCGLD 371 (373)
T ss_dssp EEEECSCCCHHHHHHHHHHHH
T ss_pred EEEEecCCchhHHHHHHHHHh
Confidence 65543 457899999998754
No 75
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=60.44 E-value=15 Score=34.46 Aligned_cols=69 Identities=23% Similarity=0.198 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCcccc-HHHHHHHHHh----h----CCcEEccC-CCCh
Q 046958 283 ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVN-NLLMQIQADL----L----GSPVLRPA-DIES 352 (417)
Q Consensus 283 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s-~~~~q~~Adv----~----g~pv~~~~-~~e~ 352 (417)
.+.+++-.+..+...+..+.... + ++.|++.||.+++ +++.++...+ + ..+|+... ..++
T Consensus 246 a~~il~~~~~~La~~i~~l~~~l--~--------p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~i~~s~~~~~a 315 (327)
T 2ap1_A 246 AHAHVERYLDLLAVCLGNILTIV--D--------PDLLVIGGGLSNFTAITTQLAERLPRHLLPVARAPRIERARHGDAG 315 (327)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH--C--------CSEEEEESGGGGSTHHHHSSGGGSGGGSCTTCCCCEEEECSCTTTH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHh--C--------CCEEEEeChhhcchhHHHHHHHHHHHhhccccCCCEEEEcCCCCcH
Confidence 34455555555555555554322 3 5778888888764 4444432222 1 23455544 3567
Q ss_pred hHHHHHHHH
Q 046958 353 TALGAAFAA 361 (417)
Q Consensus 353 salGaAllA 361 (417)
+++|||.+|
T Consensus 316 ~~~GAa~la 324 (327)
T 2ap1_A 316 GMRGAAFLH 324 (327)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHH
Confidence 899999875
No 76
>2h3g_X Biosynthetic protein; pantothenate kinase, anthrax, type III pantothenate kinase, COAX, COAA, askha; 2.00A {Bacillus anthracis str}
Probab=59.69 E-value=30 Score=31.78 Aligned_cols=71 Identities=13% Similarity=0.059 Sum_probs=54.5
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHH
Q 046958 276 FTSKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTAL 355 (417)
Q Consensus 276 ~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~sal 355 (417)
..|...|-..++.|.+..+..+++++++..+. .-+|+++||.+ ++++..+..+..+ .++-+..
T Consensus 182 ~nT~~ai~sGi~~g~~g~i~~~i~~~~~e~~~---------~~~vi~TGG~a------~~l~~~~~~~~~~--~~~LvL~ 244 (268)
T 2h3g_X 182 KNTVSAMQSGILYGYVGQVEGIVKRMKEEAKQ---------EPKVIATGGLA------KLISEESNVIDVV--DPFLTLK 244 (268)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS---------CCEEEEESTTH------HHHHHHCSSCSEE--CTTHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------CCEEEEECCCH------HHHHhhCCCCCEE--CcchHHH
Confidence 35789999999999999999999999876653 35799999988 5667777765554 2466778
Q ss_pred HHHHHHHH
Q 046958 356 GAAFAAGL 363 (417)
Q Consensus 356 GaAllA~~ 363 (417)
|-.++...
T Consensus 245 GL~~i~~~ 252 (268)
T 2h3g_X 245 GLYMLYER 252 (268)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 87776643
No 77
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=59.09 E-value=26 Score=32.58 Aligned_cols=41 Identities=27% Similarity=0.195 Sum_probs=26.7
Q ss_pred CCcEEeccchHHHhHhcC-----cC-CCCceEEeccCcceeeeecCcc
Q 046958 155 GIPISGCLGNQHAAMLGQ-----AC-KKGEAKSTYGTGAFIRLNTGEE 196 (417)
Q Consensus 155 g~pV~~g~~D~~aa~lg~-----g~-~~g~~~~s~GTs~~~~~~~~~~ 196 (417)
++||..- .|..|+++|- +. ..+-+++++||+--..++.+.+
T Consensus 98 ~~pV~v~-NDanaaalaE~~~G~~~~~~~~~~l~~GtGiG~gii~~G~ 144 (302)
T 3epq_A 98 XIPVGFS-TDVNAAALGEFLFGEAXGLDSCLYITIGTGIGAGAIVEGR 144 (302)
T ss_dssp CSCEEEE-EHHHHHHHHHHHHSTTTTCSCEEEEEESSSEEEEEEETTE
T ss_pred CCCEEEe-chhHHHHHHHHHhCCCCCCCcEEEEEECCceEEEEEECCE
Confidence 6786654 7888888763 33 4567889999985444444433
No 78
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=54.30 E-value=13 Score=35.61 Aligned_cols=76 Identities=13% Similarity=0.016 Sum_probs=44.3
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHH--HHHHHHHhhCCcEEccCCCChhHH
Q 046958 278 SKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNL--LMQIQADLLGSPVLRPADIESTAL 355 (417)
Q Consensus 278 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~--~~q~~Adv~g~pv~~~~~~e~sal 355 (417)
+..++++..++-++-.+...+...-+. ... ++.|+++||||.-.. +.+.+.+.+.. . .+...+.|+
T Consensus 261 di~~~i~~a~~~~~~~I~~~i~~~l~~-~~~--------~~~Ivl~GGGa~l~~~~l~~~i~~~~~~--~-~~p~~anA~ 328 (355)
T 3js6_A 261 DFKDEFYKEQDSLIEEVMSNFEITVGN-INS--------IDRIIVTGGGANIHFDSLSHYYSDVFEK--A-DDSQFSNVR 328 (355)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHTCC-TTS--------CSEEEEESTTHHHHHHHHHHHSSSCEEC--C-SSGGGHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhc-hhh--------ccEEEEECcchhcchhhHHHHHHHHCCC--C-CCcHHHHHH
Confidence 344555555555554444433332111 112 688999999997433 44667776633 3 445568999
Q ss_pred HHHHHHHHhc
Q 046958 356 GAAFAAGLAI 365 (417)
Q Consensus 356 GaAllA~~~~ 365 (417)
|...++..-.
T Consensus 329 G~~~~~~~~~ 338 (355)
T 3js6_A 329 GYEKLGELLK 338 (355)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9998876543
No 79
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=52.88 E-value=14 Score=34.34 Aligned_cols=65 Identities=15% Similarity=0.053 Sum_probs=41.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccc--cHHHHHHHHHhhCCcEEccCCCChhHHHHH
Q 046958 281 HFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATV--NNLLMQIQADLLGSPVLRPADIESTALGAA 358 (417)
Q Consensus 281 ~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~--s~~~~q~~Adv~g~pv~~~~~~e~salGaA 358 (417)
...+.+++-.+..+...+..+... + +..|++.||.++ .+.+.+.+... +.. ...++++|||
T Consensus 226 ~~A~~i~~~~~~~L~~~l~~l~~~---~--------p~~VvlgGgv~~~~~~~l~~~l~~~----i~~--~~~~~~~GAa 288 (305)
T 1zc6_A 226 PEADALLRQAGEDAWAIARALDPQ---D--------ELPVALCGGLGQALRDWLPPGFRQR----LVA--PQGDSAQGAL 288 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCTT---C--------CSCEEEESHHHHHTGGGSCHHHHHH----CCC--CSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC---C--------CCeEEEECCchHhHHHHHHHHHHhh----ccC--CCCCHHHHHH
Confidence 456667777777777766666541 4 678989898875 34444433332 222 3567899999
Q ss_pred HHHH
Q 046958 359 FAAG 362 (417)
Q Consensus 359 llA~ 362 (417)
++|.
T Consensus 289 ~la~ 292 (305)
T 1zc6_A 289 LLLQ 292 (305)
T ss_dssp HHTC
T ss_pred HHHh
Confidence 9874
No 80
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=49.50 E-value=7 Score=38.23 Aligned_cols=47 Identities=15% Similarity=0.022 Sum_probs=33.5
Q ss_pred CceEEEecCccccHHHHHHHHHhhCCc----------------------EEcc---CCCChhHHHHHHHHHH
Q 046958 317 EFVLRVDGGATVNNLLMQIQADLLGSP----------------------VLRP---ADIESTALGAAFAAGL 363 (417)
Q Consensus 317 ~~~i~~~GG~a~s~~~~q~~Adv~g~p----------------------v~~~---~~~e~salGaAllA~~ 363 (417)
++.|+++||.++-+-+.+.+.+-++.. |.+. +...++.+|++++|..
T Consensus 316 ~~~IvL~GG~s~~pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 316 YKNIVLSGGSTMFRDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp HHCEEEESGGGCSTTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred HhceEEeCCccccccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 577999999999988877776644322 2232 2346899999999853
No 81
>1cza_N Hexokinase type I; structurally homologous domains, transferase; HET: GLC G6P ADP; 1.90A {Homo sapiens} SCOP: c.55.1.3 c.55.1.3 c.55.1.3 c.55.1.3 PDB: 1dgk_N* 1hkb_A* 1qha_A* 1hkc_A* 1bg3_A* 2nzt_A*
Probab=48.31 E-value=24 Score=38.52 Aligned_cols=47 Identities=17% Similarity=0.185 Sum_probs=30.5
Q ss_pred eEEEecCccc-cHHHHHHHHHhh----C-CcEEccCCCChhHHHHHHHHHHhc
Q 046958 319 VLRVDGGATV-NNLLMQIQADLL----G-SPVLRPADIESTALGAAFAAGLAI 365 (417)
Q Consensus 319 ~i~~~GG~a~-s~~~~q~~Adv~----g-~pv~~~~~~e~salGaAllA~~~~ 365 (417)
.|.+.||..+ -|.+.+.+...+ + .+|.+....+++.+|||++|+.+.
T Consensus 857 ~V~vdGsv~~~~p~f~~~~~~~l~~l~~~~~v~~~~~~dgsg~GAAl~aa~~~ 909 (917)
T 1cza_N 857 TVGVDGTLYKLHPHFSRIMHQTVKELSPKCNVSFLLSEDGSGKGAALITAVGV 909 (917)
T ss_dssp EEEEECHHHHHCTTHHHHHHHHHHHHSTTEEEEEEECSSCSHHHHHHHHHHHH
T ss_pred EEEECCHHHHcCcHHHHHHHHHHHHhCCCCceEEEEecCChHHHHHHHHHHHH
Confidence 4555566544 455544443333 2 356666678999999999999875
No 82
>2iir_A Acetate kinase; transferase; 3.30A {Thermotoga maritima}
Probab=47.10 E-value=15 Score=35.98 Aligned_cols=49 Identities=10% Similarity=0.058 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCcc-ccHHHHHHHHHhhC
Q 046958 284 RAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGAT-VNNLLMQIQADLLG 341 (417)
Q Consensus 284 rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a-~s~~~~q~~Adv~g 341 (417)
+-++|-.+|+++..+-.+.-..| . ++.|+++||.. +++.+++.+.+-++
T Consensus 299 ~lA~d~f~yri~k~IGa~~a~Lg-g--------vDaIVFTgGIGEns~~vR~~i~~~l~ 348 (403)
T 2iir_A 299 KLVLEIYDYRIAKYIGAYAAAMN-G--------VDAIVFTAGVGENSPITREDVCSYLE 348 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHT-C--------CSEEEEEHHHHTTCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-C--------CCEEEECcccccCCHHHHHHHHhhhh
Confidence 44888999999988887765455 4 89999999999 78888887776554
No 83
>2f9w_A Pantothenate kinase; COAA, transferase; HET: PAU; 1.90A {Pseudomonas aeruginosa} SCOP: c.55.1.13 c.55.1.13 PDB: 2f9t_A*
Probab=46.03 E-value=28 Score=32.08 Aligned_cols=67 Identities=15% Similarity=0.084 Sum_probs=47.7
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHH
Q 046958 276 FTSKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTAL 355 (417)
Q Consensus 276 ~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~sal 355 (417)
..|...|-..++.|.+..+..+++++++..+. .-+|+++||.++ +++..+. +..+ .++-+..
T Consensus 201 ~nT~~ai~sGi~~g~~g~Ie~~i~~~~~e~~~---------~~~vi~TGG~a~------~l~~~~~-~~~~--d~~LvL~ 262 (271)
T 2f9w_A 201 QATAEAVERGCLLMLRGFVREQYAMACELLGP---------DCEIFLTGGDAE------LVRDELA-GARI--MPDLVFV 262 (271)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCT---------TCEEEEESTTGG------GTGGGCT-TCEE--CTTHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---------CCEEEEECCCHH------HHHhhCC-CCEE--CcChHHH
Confidence 35789999999999999999999999876663 357999999984 4455555 3333 2344555
Q ss_pred HHHHH
Q 046958 356 GAAFA 360 (417)
Q Consensus 356 GaAll 360 (417)
|-.++
T Consensus 263 GL~~i 267 (271)
T 2f9w_A 263 GLALA 267 (271)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 55443
No 84
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=45.86 E-value=32 Score=35.23 Aligned_cols=74 Identities=15% Similarity=0.149 Sum_probs=45.9
Q ss_pred eEEEcCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCC-cE
Q 046958 268 SVCIGITRFTSKAHFARAVLESMCFL--VKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGS-PV 344 (417)
Q Consensus 268 g~~~Gl~~~~~~~~l~rAvlEgia~~--~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~-pv 344 (417)
..+..+...++-++ ++-|-+-+-.. ....++.+... ...+ ..-.+..|+++||+|+-+-+.|+..++|+. +|
T Consensus 503 ~~L~~I~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~-~~~g---~~r~i~~VVLTGGsSql~GI~ElA~~iL~~y~V 577 (610)
T 2d0o_A 503 DELVPLPGDLALEK-VRAIRRSAKERVFVTNALRALRQV-SPTG---NIRDIPFVVLVGGSSLDFEVPQLVTDALAHYRL 577 (610)
T ss_dssp SCEEECCTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHH-SSSS---CGGGCCEEEEESGGGGCSSHHHHHHHHTTTSSC
T ss_pred cceeeeCCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCc-cCCC---cccccCCEEEeCchhhcccHHHHHHHHhCcCCe
Confidence 56667755555666 55544442222 12235554431 1110 000158899999999999999999999999 88
Q ss_pred Ec
Q 046958 345 LR 346 (417)
Q Consensus 345 ~~ 346 (417)
++
T Consensus 578 Ri 579 (610)
T 2d0o_A 578 VA 579 (610)
T ss_dssp EE
T ss_pred EE
Confidence 76
No 85
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=43.20 E-value=14 Score=36.38 Aligned_cols=49 Identities=14% Similarity=0.200 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCcc-ccHHHHHHHHHhhC
Q 046958 284 RAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGAT-VNNLLMQIQADLLG 341 (417)
Q Consensus 284 rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a-~s~~~~q~~Adv~g 341 (417)
+-++|-.+|+++..+-.+.-..| . ++.|+++||.. +++.+++.+.+-++
T Consensus 307 ~lA~d~f~yri~k~IGa~aa~Lg-g--------vDaIVFTgGIGEns~~vR~~i~~~l~ 356 (415)
T 2e1z_A 307 RLAIKTFVHRIARHIAGHAASLH-R--------LDGIIFTGGIGENSVLIRQLVIEHLG 356 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCS-S--------CCEEEEEHHHHHHCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHHHHHhC-C--------CCEEEECccccccCHHHHHHHHhhHh
Confidence 44889999999999888865454 3 89999999999 78888887776553
No 86
>3khy_A Propionate kinase; csgid, IDP01739, ATP-binding, nucleotide-binding, transferase, structural genomics; 1.98A {Francisella tularensis subsp}
Probab=43.20 E-value=16 Score=35.56 Aligned_cols=49 Identities=18% Similarity=0.045 Sum_probs=38.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccc-cHHHHHHHHHhh
Q 046958 283 ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATV-NNLLMQIQADLL 340 (417)
Q Consensus 283 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~-s~~~~q~~Adv~ 340 (417)
++-++|-.+|+++..+-.+.-..+ . ++.|+++||... ++.+++.+.+-+
T Consensus 289 A~lA~d~f~yri~k~IGa~aa~L~-g--------vDaIVFTgGIgEns~~iR~~i~~~l 338 (384)
T 3khy_A 289 AKLAIEIFSHRVAKFVASYMIYFN-K--------LDALVFTGGIGENAANIRKNIISKL 338 (384)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGCS-S--------CCEEEEEHHHHHHCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-C--------CCEEEECCccccCcHHHHHHHHhhc
Confidence 456889999999999888865445 4 899999999985 576777665544
No 87
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=41.03 E-value=14 Score=36.21 Aligned_cols=49 Identities=12% Similarity=0.034 Sum_probs=39.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCcc-ccHHHHHHHHHhhC
Q 046958 284 RAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGAT-VNNLLMQIQADLLG 341 (417)
Q Consensus 284 rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a-~s~~~~q~~Adv~g 341 (417)
+-++|-.+|+++..+-.+.-..| . ++.|+++||.. +++.+++.+.+-++
T Consensus 299 ~lA~d~f~yri~k~IGa~~a~Lg-g--------vDaiVFTgGIGEns~~vR~~i~~~l~ 348 (408)
T 1g99_A 299 ELALEIFAYKVKKFIGEYSAVLN-G--------ADAVVFTAGIGENSASIRKRILTGLD 348 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-S--------CSEEEEEHHHHHHCHHHHHHHHTTCG
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC-C--------CCEEEECccccccCHHHHHHHHhhhh
Confidence 44889999999988888765455 3 89999999999 78888888776553
No 88
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=40.59 E-value=38 Score=31.04 Aligned_cols=68 Identities=12% Similarity=0.096 Sum_probs=49.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhh--ccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChh
Q 046958 276 FTSKAHFARAVLESMCFLVKDVLDSKQKD--AVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIEST 353 (417)
Q Consensus 276 ~~~~~~l~rAvlEgia~~~~~~~~~l~~~--~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~s 353 (417)
..|...|-..++.|.+..+..+++++++. .+.+ -+|+++||.++ +++.. ..+..+ .++-+
T Consensus 184 ~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~---------~~vi~TGG~a~------~l~~~-~~~~~~--~~~Lv 245 (266)
T 3djc_A 184 RSTIESIQSGVYYGVLGACKELIQRIHHEAFNGDQ---------ILILATGGFAS------LFDKQ-GLYDHL--VPDLV 245 (266)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCC---------EEEEEESTTGG------GGTTT-TCCSEE--CTTHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCC---------CEEEEECCChH------HhccC-CCCCEE--CcChH
Confidence 35789999999999999999999999875 4533 57999999984 34444 333333 34567
Q ss_pred HHHHHHHH
Q 046958 354 ALGAAFAA 361 (417)
Q Consensus 354 alGaAllA 361 (417)
..|-.++.
T Consensus 246 L~GL~~i~ 253 (266)
T 3djc_A 246 LQGIRLAA 253 (266)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77776665
No 89
>1zxo_A Conserved hypothetical protein Q8A1P1; NESG, BTR25, structural genomics, PSI, protein structure initiative; 3.20A {Bacteroides thetaiotaomicron} SCOP: c.55.1.5 c.55.1.5
Probab=40.31 E-value=7 Score=36.24 Aligned_cols=66 Identities=12% Similarity=0.011 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCC---cEEccCCCChhHHHHH
Q 046958 282 FARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGS---PVLRPADIESTALGAA 358 (417)
Q Consensus 282 l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~---pv~~~~~~e~salGaA 358 (417)
.++.+++-.+..+...+ .+. .-.+ +..|++.||.+++ +.+.+...+.. ++..+ .+++++|||
T Consensus 209 ~A~~i~~~~~~~La~~i-~~~--~~~~--------p~~vvlgGGv~~~--l~~~l~~~l~~~~~~i~~~--~~a~~~GAa 273 (291)
T 1zxo_A 209 AIRQLVMNSFIAFFRRN-VMQ--YDYK--------QYPVHFIGSIAYC--YKEILQDAARQTGIQIGKI--LQSPMEGLI 273 (291)
T ss_dssp TTTHHHHHHHHHHHTTT-GGG--SCTT--------TSCEEECSHHHHH--THHHHHHHTTTTTCCEEEE--CSCTHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-hcc--cCCC--------CceEEEECcHHHH--HHHHHHHHHhcCCcEEeec--CCCHHHHHH
Confidence 35556666666665555 332 1114 5788888888887 44544454543 44443 478899999
Q ss_pred HHHH
Q 046958 359 FAAG 362 (417)
Q Consensus 359 llA~ 362 (417)
.+|.
T Consensus 274 ~la~ 277 (291)
T 1zxo_A 274 QYHS 277 (291)
T ss_dssp TTSS
T ss_pred HHHH
Confidence 8763
No 90
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=40.24 E-value=32 Score=31.12 Aligned_cols=46 Identities=22% Similarity=0.293 Sum_probs=30.3
Q ss_pred CceEEEecCcccc-HHHHHHHHHhhCCcEEccCC-CChhHHHHHHHHHHh
Q 046958 317 EFVLRVDGGATVN-NLLMQIQADLLGSPVLRPAD-IESTALGAAFAAGLA 364 (417)
Q Consensus 317 ~~~i~~~GG~a~s-~~~~q~~Adv~g~pv~~~~~-~e~salGaAllA~~~ 364 (417)
++.|++.||.++. +.+.+.+. ...+|..... .++.++|||.++..-
T Consensus 215 P~~IvlgG~i~~~~~~~~~~~~--~~~~i~~s~l~~~a~~~GAa~l~~~~ 262 (267)
T 1woq_A 215 PELFIVGGGISKRADEYLPNLR--LRTPIVPAVLRNEAGIVGAAIEIALQ 262 (267)
T ss_dssp CSEEEEESGGGGGGGGTGGGCC--CSSCEEECSCSTTHHHHHHHHHHHHH
T ss_pred CCEEEEeChhhcccHHHHHhhc--cCceEEECCcCCcHHHHHHHHHHHhc
Confidence 6788888888774 44443322 2345666543 567999999988543
No 91
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=40.12 E-value=42 Score=31.91 Aligned_cols=68 Identities=9% Similarity=0.049 Sum_probs=45.9
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEE-----c-cC-CC
Q 046958 278 SKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVL-----R-PA-DI 350 (417)
Q Consensus 278 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~-----~-~~-~~ 350 (417)
...++.+.+.|-..-.+...++.+-+.. . ++.|+++|++ +++...+|+. +|+. + ++ ..
T Consensus 247 ~~~~lA~~~~~~q~~~I~~av~~v~~~~--~--------~~~vv~aG~G---~~L~~~la~~--~~~~~~~~~i~~~~s~ 311 (334)
T 3cet_A 247 DAENIAKNYYELWKELILENVENVAEKY--G--------SKKVVITGLG---ENILKDALAD--FEVISVAERYGKDVSL 311 (334)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH--C--------CCEEEEESTT---HHHHHHHTTT--SEEEEHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhc--C--------CCeEEEeCCc---HHHHHHHHhh--CCeeehhcccCccccc
Confidence 4667788888888777777776654422 3 5689999988 4777777766 7777 3 22 12
Q ss_pred ChhHHHHHHH
Q 046958 351 ESTALGAAFA 360 (417)
Q Consensus 351 e~salGaAll 360 (417)
-+-|+|+|++
T Consensus 312 vapA~avA~l 321 (334)
T 3cet_A 312 ATPSFAVAEL 321 (334)
T ss_dssp SHHHHHHHHH
T ss_pred ccCHHHHHHH
Confidence 3567777766
No 92
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=36.42 E-value=46 Score=30.12 Aligned_cols=67 Identities=12% Similarity=0.179 Sum_probs=47.9
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCCcEEccCCCChhHH
Q 046958 276 FTSKAHFARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGSPVLRPADIESTAL 355 (417)
Q Consensus 276 ~~~~~~l~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~pv~~~~~~e~sal 355 (417)
..|...|-..++.|.+..+..+++++++.. + .-+|+++||.++ +++. +..+..+ .++-+..
T Consensus 180 ~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~--~--------~~~vi~TGG~a~------~l~~-~~~~~~~--~~~L~l~ 240 (249)
T 3bex_A 180 KDTEENIRLGVVNGSVYALEGIIGRIKEVY--G--------DLPVVLTGGQSK------IVKD-MIKHEIF--DEDLTIK 240 (249)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHHHHHH--C--------CCCEEEESTTSG------GGGG-GSCCSEE--CTTHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHc--C--------CCEEEEECCChH------HHhc-CCCCcEE--CcCcHHH
Confidence 357889999999999999999999998754 3 457999999985 4455 5544333 2445666
Q ss_pred HHHHHH
Q 046958 356 GAAFAA 361 (417)
Q Consensus 356 GaAllA 361 (417)
|-.++.
T Consensus 241 GL~~i~ 246 (249)
T 3bex_A 241 GVYHFC 246 (249)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 655543
No 93
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=33.69 E-value=8.2 Score=39.54 Aligned_cols=74 Identities=15% Similarity=0.142 Sum_probs=45.7
Q ss_pred eEEEcCCCCCCHHHHHHHHHHHHHHH--HHHHHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCC-cE
Q 046958 268 SVCIGITRFTSKAHFARAVLESMCFL--VKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGS-PV 344 (417)
Q Consensus 268 g~~~Gl~~~~~~~~l~rAvlEgia~~--~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~-pv 344 (417)
..+..+...++-++ ++-+-+-+-.. ....++.+... ...+ ..-.+..|+++||+|+-+-+.|+..++|+. +|
T Consensus 505 ~~L~~I~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~-~~~g---~~r~i~~VVLTGGsSql~gI~elA~~iL~~~~V 579 (607)
T 1nbw_A 505 GELVPIDNASPLEK-IRLVRRQAKEKVFVTNCLRALRQV-SPGG---SIRDIAFVVLVGGSSLDFEIPQLITEALSHYGV 579 (607)
T ss_dssp TEEEEECCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSS-STTC---CSTTCCEEEEESGGGGSSSHHHHHHHHHHTTTC
T ss_pred cceeeeCCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCc-ccCC---cccccCCEEEeCchhhcccHHHHHHHHhCcCCe
Confidence 66667755556666 55444432222 12234554321 1010 001258899999999999999999999999 87
Q ss_pred Ec
Q 046958 345 LR 346 (417)
Q Consensus 345 ~~ 346 (417)
++
T Consensus 580 Ri 581 (607)
T 1nbw_A 580 VA 581 (607)
T ss_dssp EE
T ss_pred EE
Confidence 75
No 94
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=24.27 E-value=33 Score=35.71 Aligned_cols=49 Identities=14% Similarity=0.089 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHH-HHHHHHhhccccccccCCCCCceEEEecCccccHHHHHHHHHhhCC
Q 046958 282 FARAVLESMCFLVKD-VLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVNNLLMQIQADLLGS 342 (417)
Q Consensus 282 l~rAvlEgia~~~~~-~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s~~~~q~~Adv~g~ 342 (417)
|=.||+|+|...... -...+.+. ...|.++|||++-+.+--++-|-++.
T Consensus 477 LdkAIi~SIt~a~~~~d~~k~~~~------------y~nilivGggski~g~~~~L~dri~i 526 (655)
T 4am6_A 477 LEKAIVQSIANASITADVTRMNSF------------YSNILIVGGSSKIPALDFILTDRINI 526 (655)
T ss_dssp HHHHHHHHHHHHHHTSCGGGHHHH------------HTCEEEESTTCCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhhccccHHHHHHH------------hhcEEEEcCcccCccHHHHHHHHHHh
Confidence 346777777755443 22223332 35699999999999998888888763
No 95
>3r9p_A ACKA; ssgcid, seattle structural genomics center for infectious DI acetate kinase, transferase; HET: PGE; 1.90A {Mycobacterium avium subsp} PDB: 3p4i_A 4dq8_A
Probab=23.62 E-value=68 Score=31.19 Aligned_cols=48 Identities=8% Similarity=-0.006 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccccccccCCCCCceEEEecCcccc-HHHHHHHHHh
Q 046958 283 ARAVLESMCFLVKDVLDSKQKDAVEKGVIKDAKPEFVLRVDGGATVN-NLLMQIQADL 339 (417)
Q Consensus 283 ~rAvlEgia~~~~~~~~~l~~~~g~~~~~~~~~~~~~i~~~GG~a~s-~~~~q~~Adv 339 (417)
++-++|-.+|+++..+-.+.-..| . ++.|+++||...| +.+++.+.+-
T Consensus 290 A~lA~d~f~yri~k~Iga~aa~Lg-~--------vDaIVfTGGIgens~~vR~~i~~~ 338 (391)
T 3r9p_A 290 AQLAYSVFTHRLRKYIGAYLAVLG-H--------TDVISFTAGIGENDAAVRRDAVSG 338 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHS-S--------CCEEEEEHHHHHHCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhC-C--------CCEEEECcccccCCHHHHHHHHHH
Confidence 566899999999988887765455 4 8999999999874 7677766543
No 96
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=23.25 E-value=18 Score=35.08 Aligned_cols=47 Identities=19% Similarity=0.104 Sum_probs=20.4
Q ss_pred CceEEEecCccccHHHHHHHHHhhCC-----------------cEEcc--C-CCChhHHHHHHHHHH
Q 046958 317 EFVLRVDGGATVNNLLMQIQADLLGS-----------------PVLRP--A-DIESTALGAAFAAGL 363 (417)
Q Consensus 317 ~~~i~~~GG~a~s~~~~q~~Adv~g~-----------------pv~~~--~-~~e~salGaAllA~~ 363 (417)
.+.|+++||++.-+-+.+.+.+-++. +|.+. + ...++.+|++++|..
T Consensus 298 ~~nIvLtGG~s~~~G~~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 298 YKHIVLSGGSTMYPGLPSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp HTTCEEESGGGCSTTHHHHHHHHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred HhCEEEeCcccccccHHHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 35699999999988777766665543 45442 2 345788899988863
No 97
>2nu8_B SCS-beta, succinyl-COA synthetase beta chain; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.23.4.1 d.142.1.4 PDB: 1scu_B* 2nu6_B* 1jkj_B* 2nu7_B* 2nu9_B* 2nua_B* 2scu_B* 1jll_B* 1cqj_B* 1cqi_B*
Probab=21.46 E-value=1.7e+02 Score=28.17 Aligned_cols=62 Identities=19% Similarity=0.131 Sum_probs=43.2
Q ss_pred CceEEE--ecCccccHHHHHHHHHh-----hCCcEEccCCCChhHHHHHHHHHHhcCCC--CCHHHHHhcc
Q 046958 317 EFVLRV--DGGATVNNLLMQIQADL-----LGSPVLRPADIESTALGAAFAAGLAIGVF--KEEEIFASSE 378 (417)
Q Consensus 317 ~~~i~~--~GG~a~s~~~~q~~Adv-----~g~pv~~~~~~e~salGaAllA~~~~G~~--~~~~~~~~~~ 378 (417)
++.|++ .||.++.+...+-+.+. .++||.+.-...-.-.|-.++.-.++..+ .+++++++++
T Consensus 311 v~~ilvni~ggi~~~~~vA~gii~a~~~~~~~~pivvrl~G~n~~~g~~~l~~~g~~~~~~~~~~~aa~~~ 381 (388)
T 2nu8_B 311 VKAVLVNIFGGIVRCDLIADGIIGAVAEVGVNVPVVVRLEGNNAELGAKKLADSGLNIIAAKGLTDAAQQV 381 (388)
T ss_dssp CCEEEEEEESCSSCHHHHHHHHHHHHHHHTCCSCEEEEEESTTHHHHHHHHHTTCSSEEECSSHHHHHHHH
T ss_pred CCEEEEEecCCcCCchHHHHHHHHHHHhcCCCCeEEEEeCCCCHHHHHHHHHHCCCceecCCCHHHHHHHH
Confidence 666666 68889888877766666 46897763222236678888876667777 8888887654
Done!