BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046960
(165 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302141995|emb|CBI19198.3| unnamed protein product [Vitis vinifera]
Length = 344
Score = 164 bits (416), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/131 (64%), Positives = 100/131 (76%), Gaps = 7/131 (5%)
Query: 1 MGASFLSTVPFMLPIVPPPSRSAFSTVATRCSAHAGAIRCHKIETQITVEAGFGRRDILK 60
MG SFLST P ++P+ P PS + R S AG IRC++IE T E GF RRD+LK
Sbjct: 1 MGVSFLSTAPSLIPMAPQPSSTP------RHSLQAGRIRCNRIECNGTDEDGFRRRDVLK 54
Query: 61 CIGATIGMEIISSSGS-VEMARAADLIQRRQRSEFISNIKETLQTALKGNPDLIPSLLTL 119
C+GAT+GME+++SSG VEMA AADLIQ RQRSEF SN+K TL TA+KGNPD+IPSLLTL
Sbjct: 55 CVGATLGMELLASSGPFVEMAAAADLIQLRQRSEFRSNVKGTLFTAIKGNPDIIPSLLTL 114
Query: 120 ALNDAMTYDKV 130
ALNDAMTYDK
Sbjct: 115 ALNDAMTYDKA 125
>gi|255545804|ref|XP_002513962.1| L-ascorbate peroxidase, putative [Ricinus communis]
gi|223547048|gb|EEF48545.1| L-ascorbate peroxidase, putative [Ricinus communis]
Length = 388
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 83/130 (63%), Positives = 95/130 (73%), Gaps = 2/130 (1%)
Query: 1 MGASFLSTVPFMLPIVPPPSRSAFSTVATRCSAHAGAIRCHKIETQITVEAGFGRRDILK 60
MG +FLST+P ++ + S STV R AG I K ET +T E F RRD+LK
Sbjct: 145 MGVTFLSTIPSLVHL-SSLSNPTTSTVTHRLPPRAGPICGIKNETDVTSENDFLRRDVLK 203
Query: 61 CIGATIGMEIISSSGS-VEMARAADLIQRRQRSEFISNIKETLQTALKGNPDLIPSLLTL 119
C GATIGME+I+SSGS VEMA AADLIQRRQRSEF SNIK TL TALK P+L+PS+LTL
Sbjct: 204 CFGATIGMELITSSGSFVEMAYAADLIQRRQRSEFQSNIKGTLYTALKEKPELVPSILTL 263
Query: 120 ALNDAMTYDK 129
ALNDAMTYDK
Sbjct: 264 ALNDAMTYDK 273
>gi|363807174|ref|NP_001242092.1| uncharacterized protein LOC100795192 [Glycine max]
gi|255638071|gb|ACU19350.1| unknown [Glycine max]
Length = 370
Score = 143 bits (360), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 97/136 (71%), Gaps = 14/136 (10%)
Query: 1 MGASFLSTVPFMLPIVP---PPSRSAFSTVATRCSAHAGAIRCHKIETQITVEAGFG--R 55
MG SFLST P +LP+V PPS TR + +I C+K + ++ E F R
Sbjct: 1 MGVSFLSTCPSLLPLVAYDTPPS--------TRYQPRSVSICCNKTISNVSDEEPFHWRR 52
Query: 56 RDILKCIGATIGMEIISSSGS-VEMARAADLIQRRQRSEFISNIKETLQTALKGNPDLIP 114
R+ILKC GAT+G+E+I SSGS V MA AADLIQRRQRSEF S +KETL TA+KGNPDLIP
Sbjct: 53 REILKCAGATVGLELIGSSGSLVGMANAADLIQRRQRSEFQSKVKETLFTAIKGNPDLIP 112
Query: 115 SLLTLALNDAMTYDKV 130
SLLTLALNDA+TYDK
Sbjct: 113 SLLTLALNDALTYDKA 128
>gi|356500717|ref|XP_003519178.1| PREDICTED: thylakoid lumenal 29 kDa protein, chloroplastic-like
[Glycine max]
Length = 347
Score = 143 bits (360), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/136 (60%), Positives = 96/136 (70%), Gaps = 14/136 (10%)
Query: 1 MGASFLSTVPFMLPIVP---PPSRSAFSTVATRCSAHAGAIRCHKIETQITVEAGFG--R 55
MG SFLST P +LP+V PPS R + +I C+K + ++ F R
Sbjct: 1 MGVSFLSTCPSLLPLVAYDTPPS--------ARYQPRSVSICCNKTISDVSDGEPFHWRR 52
Query: 56 RDILKCIGATIGMEIISSSGS-VEMARAADLIQRRQRSEFISNIKETLQTALKGNPDLIP 114
RD+LKC GAT+G+E+I SSGS VEMA AADLIQRRQRSEF S IKETL TA+KGNPDLIP
Sbjct: 53 RDVLKCAGATVGLELIGSSGSLVEMANAADLIQRRQRSEFQSKIKETLFTAIKGNPDLIP 112
Query: 115 SLLTLALNDAMTYDKV 130
SLLTLALNDA+TYDK
Sbjct: 113 SLLTLALNDALTYDKA 128
>gi|380863110|gb|AFF18848.1| APX [Dimocarpus longan]
Length = 341
Score = 141 bits (356), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 78/131 (59%), Positives = 94/131 (71%), Gaps = 10/131 (7%)
Query: 1 MGASFLSTVPFMLPIVPPPSRSAFSTVATRCSAHAGAIRCHKIETQITVEAGFGRRDILK 60
M SFLSTV P P+ + T T + G IRC K++T +++ RR+IL
Sbjct: 1 MNVSFLSTVS-----SPLPTLTTCKTTTTTTTTSVGVIRCRKVDTDVSLH----RREILN 51
Query: 61 CIGATIGMEIISSSGS-VEMARAADLIQRRQRSEFISNIKETLQTALKGNPDLIPSLLTL 119
C+GATIGME+I SSGS VEMA AADLIQRRQRSEF+SN+K TLQ A+KG P+LIPSLLTL
Sbjct: 52 CVGATIGMEMIGSSGSFVEMASAADLIQRRQRSEFLSNVKGTLQIAIKGKPELIPSLLTL 111
Query: 120 ALNDAMTYDKV 130
ALND+MTYDK
Sbjct: 112 ALNDSMTYDKA 122
>gi|224082097|ref|XP_002306565.1| predicted protein [Populus trichocarpa]
gi|222856014|gb|EEE93561.1| predicted protein [Populus trichocarpa]
Length = 332
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 62/95 (65%), Positives = 79/95 (83%), Gaps = 1/95 (1%)
Query: 37 AIRCHKIETQITVEAGFGRRDILKCIGATIGMEIISSSGS-VEMARAADLIQRRQRSEFI 95
AIRCHK++T + E RR++LKC GAT+GME+++SSGS VEMA AADLIQRRQRSEF
Sbjct: 19 AIRCHKMDTDVPGENVLRRREVLKCFGATVGMELLASSGSFVEMASAADLIQRRQRSEFQ 78
Query: 96 SNIKETLQTALKGNPDLIPSLLTLALNDAMTYDKV 130
S+I++TL A+KG P+L+P +LTLALNDA+TYDK
Sbjct: 79 SSIRQTLFAAIKGKPELVPYILTLALNDAITYDKA 113
>gi|11387206|sp|Q9THX6.1|TL29_SOLLC RecName: Full=Thylakoid lumenal 29 kDa protein, chloroplastic;
Short=TL29; AltName: Full=LeAPx09; AltName: Full=P29;
Flags: Precursor
gi|6634469|emb|CAB64343.1| putative ascorbate peroxidase (TL29) [Solanum lycopersicum]
Length = 345
Score = 125 bits (315), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/128 (53%), Positives = 89/128 (69%), Gaps = 5/128 (3%)
Query: 4 SFLSTVPFMLPIVPPPSRSAFSTVATRCSAHAGAIRCHKIETQITVEAGFGRRDILKCIG 63
SF ST+P ++ +P PS T A+R G I C K +++ E F RRDIL+ +G
Sbjct: 3 SFASTLPSLVSFIPSPSSI---TNASRNPPQPGMI-CCKFRSELNNEDRFHRRDILQSVG 58
Query: 64 ATIGMEIIS-SSGSVEMARAADLIQRRQRSEFISNIKETLQTALKGNPDLIPSLLTLALN 122
A +GM++I+ SS +E+A AADLIQRRQRS+F S IK TL A+K NPD+IPSLLTLALN
Sbjct: 59 AAVGMDLIARSSAFIEVANAADLIQRRQRSDFQSKIKLTLYDAIKANPDIIPSLLTLALN 118
Query: 123 DAMTYDKV 130
DA+TYDK
Sbjct: 119 DAITYDKA 126
>gi|15236678|ref|NP_192640.1| ascorbate peroxidase 4 [Arabidopsis thaliana]
gi|12644689|sp|P82281.2|TL29_ARATH RecName: Full=Thylakoid lumenal 29 kDa protein, chloroplastic;
Short=TL29; AltName: Full=AtAPx07; AltName: Full=P29;
AltName: Full=Probable L-ascorbate peroxidase 4; Flags:
Precursor
gi|13899079|gb|AAK48961.1|AF370534_1 Putative L-ascorbate peroxidase [Arabidopsis thaliana]
gi|7267543|emb|CAB78025.1| putative protein [Arabidopsis thaliana]
gi|18377504|gb|AAL66918.1| putative L-ascorbate peroxidase [Arabidopsis thaliana]
gi|332657311|gb|AEE82711.1| ascorbate peroxidase 4 [Arabidopsis thaliana]
Length = 349
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 76/167 (45%), Positives = 96/167 (57%), Gaps = 12/167 (7%)
Query: 2 GASFLSTVPFMLPIVPPPSRSAFSTVATRCSAHAGAIRCHKIETQITVEA-GFGRRDILK 60
G SFLSTVP + S+ + R + IRC KIE Q++ E+ F RRD+LK
Sbjct: 3 GVSFLSTVPSFTNTTNHQHLTTLSSSSHRSAV----IRCSKIEPQVSGESLAFHRRDVLK 58
Query: 61 CIGATIGMEIISSS--GSVEMARAADLIQRRQRSEFISNIKETLQTALKGNPDLIPSLLT 118
G +GME+I + +V A+AADL QRRQRSEF S IK L T +K P+L+PSLL
Sbjct: 59 LAGTAVGMELIGNGFINNVGDAKAADLNQRRQRSEFQSKIKILLSTTIKAKPELVPSLLK 118
Query: 119 LALNDAMTYDKVRTKPLRFKCLVDVIKFLYLLWRKEGNKLMSCWLSL 165
LALNDAMTYDK + I+F L R E N+ +S LSL
Sbjct: 119 LALNDAMTYDKA----TKSGGANGSIRFSSELSRAE-NEGLSDGLSL 160
>gi|31980500|gb|AAP72143.1|AF441713_1 putative ascorbate peroxidase APX4 [Arabidopsis thaliana]
Length = 296
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 67/143 (46%), Positives = 86/143 (60%), Gaps = 8/143 (5%)
Query: 26 TVATRCSAHAGAIRCHKIETQITVEA-GFGRRDILKCIGATIGMEIISSS--GSVEMARA 82
T + S + IRC KIE Q++ E+ F RRD+LK G +GME+I + +V A+A
Sbjct: 13 TTLSSSSHRSAVIRCSKIEPQVSGESLAFHRRDVLKLAGTAVGMELIGNGFINNVGDAKA 72
Query: 83 ADLIQRRQRSEFISNIKETLQTALKGNPDLIPSLLTLALNDAMTYDKVRTKPLRFKCLVD 142
ADL QRRQRSEF + IK L T +K P+L+PSLL LALNDAMTYDK +
Sbjct: 73 ADLNQRRQRSEFQAKIKILLSTTIKAKPELVPSLLKLALNDAMTYDKA----TKSGGANG 128
Query: 143 VIKFLYLLWRKEGNKLMSCWLSL 165
I+F L R E N+ +S LSL
Sbjct: 129 SIRFSSELSRAE-NEGLSDGLSL 150
>gi|357489751|ref|XP_003615163.1| hypothetical protein MTR_5g064610 [Medicago truncatula]
gi|355516498|gb|AES98121.1| hypothetical protein MTR_5g064610 [Medicago truncatula]
Length = 353
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 92/136 (67%), Gaps = 8/136 (5%)
Query: 1 MGASFLSTVPFMLPIVPPPSRSAF-STVATRCSAHAGAIRCHKIETQITVEA----GFGR 55
MG SFLS LP + P S + T +TR + +I C KI+T ++ E + R
Sbjct: 1 MGVSFLSIS--TLPSLHPLGGSHYPKTTSTRHQPRSVSICCAKIKTDVSDEEEQFFHWRR 58
Query: 56 RDILKCIGATIGMEIISSSGSVE-MARAADLIQRRQRSEFISNIKETLQTALKGNPDLIP 114
RD+LKCIG TIG+E ISSSGS+ A AADLI+RRQRS+F S IK TL TA+K NPDL P
Sbjct: 59 RDVLKCIGLTIGLESISSSGSLLGTANAADLIERRQRSDFQSQIKGTLYTAIKANPDLTP 118
Query: 115 SLLTLALNDAMTYDKV 130
S+LTLALNDA+TYDK
Sbjct: 119 SILTLALNDALTYDKA 134
>gi|449436992|ref|XP_004136276.1| PREDICTED: thylakoid lumenal 29 kDa protein, chloroplastic-like
[Cucumis sativus]
gi|449496987|ref|XP_004160282.1| PREDICTED: thylakoid lumenal 29 kDa protein, chloroplastic-like
[Cucumis sativus]
Length = 368
Score = 105 bits (263), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 52/94 (55%), Positives = 70/94 (74%), Gaps = 1/94 (1%)
Query: 38 IRCHKIETQITVEAGFGRRDILKCIGATIGMEI-ISSSGSVEMARAADLIQRRQRSEFIS 96
+RC ++T + + RRD+L+ G T+ + + ++S VE A AADLIQRRQRSEF+S
Sbjct: 56 LRCAHVKTDASNQDRISRRDVLQGFGGTLALGLMVNSDLMVEPAYAADLIQRRQRSEFLS 115
Query: 97 NIKETLQTALKGNPDLIPSLLTLALNDAMTYDKV 130
+IK TL TA+K NPD++PSLLTLALNDA+TYDK
Sbjct: 116 SIKSTLYTAIKKNPDIVPSLLTLALNDAVTYDKA 149
>gi|312281719|dbj|BAJ33725.1| unnamed protein product [Thellungiella halophila]
Length = 348
Score = 105 bits (262), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 65/133 (48%), Positives = 80/133 (60%), Gaps = 10/133 (7%)
Query: 2 GASFLSTVPFMLPIVPPPSRSAFSTVATRCSAHAG-AIRCHKIETQITVEA-GFGRRDIL 59
G SFLSTVP + + + S +G IRC KI+ Q++ E F RRD+L
Sbjct: 3 GVSFLSTVPSF------TNTNNLQHLTLSSSHRSGLIIRCCKIDPQVSGECLAFHRRDVL 56
Query: 60 KCIGATIGMEIISSS--GSVEMARAADLIQRRQRSEFISNIKETLQTALKGNPDLIPSLL 117
K G IGME+I V A+AADL QRRQRS+F S IK L A+K P+L+PS+L
Sbjct: 57 KLAGTAIGMELIGKGFINHVGDAKAADLNQRRQRSDFQSKIKLMLSKAVKAKPELVPSIL 116
Query: 118 TLALNDAMTYDKV 130
TLALNDAMTYDK
Sbjct: 117 TLALNDAMTYDKA 129
>gi|326513514|dbj|BAJ87776.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 349
Score = 103 bits (256), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 66/136 (48%), Positives = 84/136 (61%), Gaps = 15/136 (11%)
Query: 2 GASFLSTVPFM-LPIVPPPSRSAFSTVATRCSAHAG----AIRCHKIETQITVEAGFGRR 56
GA+FLS + LP V P+R + V C A AG A C + F RR
Sbjct: 3 GATFLSAPALLGLPSVSSPARR-HAHVQVCCQAKAGGSEDAAACQEAPR-------FHRR 54
Query: 57 DILK-CIGATIGMEII-SSSGSVEMARAADLIQRRQRSEFISNIKETLQTALKGNPDLIP 114
D++ C GA +G+EI +S+ S +A AADLI+RRQRSEF S+IK TL A++ P+L+P
Sbjct: 55 DLIGGCFGAAVGLEIAEASTRSTGVAAAADLIERRQRSEFQSSIKSTLTAAIEAKPELVP 114
Query: 115 SLLTLALNDAMTYDKV 130
SLLTLALNDAMTYDK
Sbjct: 115 SLLTLALNDAMTYDKA 130
>gi|217073228|gb|ACJ84973.1| unknown [Medicago truncatula]
Length = 353
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 74/136 (54%), Positives = 91/136 (66%), Gaps = 8/136 (5%)
Query: 1 MGASFLSTVPFMLPIVPPPSRSAF-STVATRCSAHAGAIRCHKIETQITVEA----GFGR 55
MG SFLS LP + P S + T +TR + +I KI+T ++ E + R
Sbjct: 1 MGVSFLSIS--TLPSLHPLGGSHYPKTTSTRHQPRSVSICRAKIKTDVSDEEEQFFHWRR 58
Query: 56 RDILKCIGATIGMEIISSSGSVE-MARAADLIQRRQRSEFISNIKETLQTALKGNPDLIP 114
RD+LKCIG TIG+E ISSSGS+ A AADLI+RRQRS+F S IK TL TA+K NPDL P
Sbjct: 59 RDVLKCIGLTIGLESISSSGSLLGTANAADLIERRQRSDFQSQIKGTLYTAIKANPDLTP 118
Query: 115 SLLTLALNDAMTYDKV 130
S+LTLALNDA+TYDK
Sbjct: 119 SILTLALNDALTYDKA 134
>gi|414585611|tpg|DAA36182.1| TPA: hypothetical protein ZEAMMB73_935715 [Zea mays]
Length = 155
Score = 101 bits (252), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 65/138 (47%), Positives = 83/138 (60%), Gaps = 15/138 (10%)
Query: 2 GASFLSTVPFMLPIVPPPSRSAFSTVATR-------CSAHAGAIRCHKIETQITVEAGFG 54
GA+FLST + V S + ST R C A A+ + E ++ F
Sbjct: 3 GANFLSTAALVARGVAACS--SISTPTRRHPQIRVCCRADVEAMEAYAHEERLR----FR 56
Query: 55 RRDIL-KCIGATIGMEIISSSGSVE-MARAADLIQRRQRSEFISNIKETLQTALKGNPDL 112
RRD + C+G IG+E+I S S +A AADLI+RRQRSEF S IK+TL A+K P+L
Sbjct: 57 RRDFIGTCVGTAIGLEMIDGSTSFSGVATAADLIERRQRSEFQSKIKDTLYVAIKAKPEL 116
Query: 113 IPSLLTLALNDAMTYDKV 130
+PSLLT+ALNDAMTYDKV
Sbjct: 117 VPSLLTMALNDAMTYDKV 134
>gi|226531556|ref|NP_001140897.1| hypothetical protein precursor [Zea mays]
gi|194701652|gb|ACF84910.1| unknown [Zea mays]
gi|414585612|tpg|DAA36183.1| TPA: hypothetical protein ZEAMMB73_935715 [Zea mays]
Length = 351
Score = 99.8 bits (247), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 64/138 (46%), Positives = 83/138 (60%), Gaps = 15/138 (10%)
Query: 2 GASFLSTVPFMLPIVPPPSRSAFSTVATR-------CSAHAGAIRCHKIETQITVEAGFG 54
GA+FLST + V + S+ ST R C A A+ + E ++ F
Sbjct: 3 GANFLSTAALVARGVA--ACSSISTPTRRHPQIRVCCRADVEAMEAYAHEERLR----FR 56
Query: 55 RRDIL-KCIGATIGMEIISSSGSVE-MARAADLIQRRQRSEFISNIKETLQTALKGNPDL 112
RRD + C+G IG+E+I S S +A AADLI+RRQRSEF S IK+TL A+K P+L
Sbjct: 57 RRDFIGTCVGTAIGLEMIDGSTSFSGVATAADLIERRQRSEFQSKIKDTLYVAIKAKPEL 116
Query: 113 IPSLLTLALNDAMTYDKV 130
+PSLLT+ALNDAMTYDK
Sbjct: 117 VPSLLTMALNDAMTYDKT 134
>gi|224032887|gb|ACN35519.1| unknown [Zea mays]
Length = 112
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 50/80 (62%), Positives = 61/80 (76%), Gaps = 2/80 (2%)
Query: 53 FGRRDIL-KCIGATIGMEIISSSGSVE-MARAADLIQRRQRSEFISNIKETLQTALKGNP 110
F RRD + C+G IG+E+I S S +A AADLI+RRQRSEF S IK+TL A+K P
Sbjct: 12 FRRRDFIGTCVGTAIGLEMIDGSTSFSGVATAADLIERRQRSEFQSKIKDTLYVAIKAKP 71
Query: 111 DLIPSLLTLALNDAMTYDKV 130
+L+PSLLT+ALNDAMTYDKV
Sbjct: 72 ELVPSLLTMALNDAMTYDKV 91
>gi|115460338|ref|NP_001053769.1| Os04g0602100 [Oryza sativa Japonica Group]
gi|113565340|dbj|BAF15683.1| Os04g0602100 [Oryza sativa Japonica Group]
gi|215697636|dbj|BAG91630.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218195503|gb|EEC77930.1| hypothetical protein OsI_17267 [Oryza sativa Indica Group]
gi|222629487|gb|EEE61619.1| hypothetical protein OsJ_16043 [Oryza sativa Japonica Group]
Length = 353
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 84/134 (62%), Gaps = 7/134 (5%)
Query: 2 GASFLSTV--PFMLPIVPPPSRSAFSTVATRCSAHAGAIRC-HKIETQITVEAGFGRRDI 58
GASFLSTV P P R + S+V++ HA + C H + V F RRD+
Sbjct: 3 GASFLSTVRQPPAPPPPLLAPRGSASSVSSPARRHAHILVCCHATAQEEPVR--FRRRDL 60
Query: 59 LK-CIGATIGMEIIS-SSGSVEMARAADLIQRRQRSEFISNIKETLQTALKGNPDLIPSL 116
+ C+ IG+E++ S+G +A AADLI+RRQRSEF S+IK TL TA+ +LIPSL
Sbjct: 61 IGGCLTTAIGLELVEGSTGFTGVATAADLIERRQRSEFQSSIKSTLATAITAKKELIPSL 120
Query: 117 LTLALNDAMTYDKV 130
LTLALNDAMTYDK
Sbjct: 121 LTLALNDAMTYDKA 134
>gi|38344143|emb|CAE01822.2| OSJNBa0041A02.10 [Oryza sativa Japonica Group]
gi|116310925|emb|CAH67863.1| B0403H10-OSIGBa0105A11.15 [Oryza sativa Indica Group]
Length = 348
Score = 97.8 bits (242), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 66/134 (49%), Positives = 84/134 (62%), Gaps = 7/134 (5%)
Query: 2 GASFLSTV--PFMLPIVPPPSRSAFSTVATRCSAHAGAIRC-HKIETQITVEAGFGRRDI 58
GASFLSTV P P R + S+V++ HA + C H + V F RRD+
Sbjct: 3 GASFLSTVRQPPAPPPPLLAPRGSASSVSSPARRHAHILVCCHATAQEEPVR--FRRRDL 60
Query: 59 LK-CIGATIGMEII-SSSGSVEMARAADLIQRRQRSEFISNIKETLQTALKGNPDLIPSL 116
+ C+ IG+E++ S+G +A AADLI+RRQRSEF S+IK TL TA+ +LIPSL
Sbjct: 61 IGGCLTTAIGLELVEGSTGFTGVATAADLIERRQRSEFQSSIKSTLATAITAKKELIPSL 120
Query: 117 LTLALNDAMTYDKV 130
LTLALNDAMTYDK
Sbjct: 121 LTLALNDAMTYDKA 134
>gi|357165619|ref|XP_003580441.1| PREDICTED: thylakoid lumenal 29 kDa protein, chloroplastic-like
[Brachypodium distachyon]
Length = 364
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 65/135 (48%), Positives = 80/135 (59%), Gaps = 8/135 (5%)
Query: 2 GASFLSTVPFMLPIVPP-PSRSAFSTVATRCSA----HAGAIRCHKIETQITVEAGFGRR 56
GA+FLS + P PS S S+ A R A HA A F RR
Sbjct: 13 GATFLSAPALLGPRAGGLPSVSVTSSPARRQHAYVCCHAKAGGSEAAAAAREEPPRFRRR 72
Query: 57 DILK-CIGATIGMEIISSSGSVEMARAADLIQRRQRSEFISNIKETLQTALKGNPDLIPS 115
D++ C+G +G+EII GS +A AADLI+RRQRSEF S+IK TL A++ P+L+PS
Sbjct: 73 DLIGGCMGTAVGLEIID--GSTGVATAADLIERRQRSEFQSSIKGTLTAAIQAKPELVPS 130
Query: 116 LLTLALNDAMTYDKV 130
LLTLALNDAMTYDK
Sbjct: 131 LLTLALNDAMTYDKA 145
>gi|297808959|ref|XP_002872363.1| hypothetical protein ARALYDRAFT_489709 [Arabidopsis lyrata subsp.
lyrata]
gi|297318200|gb|EFH48622.1| hypothetical protein ARALYDRAFT_489709 [Arabidopsis lyrata subsp.
lyrata]
Length = 337
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 88/166 (53%), Gaps = 22/166 (13%)
Query: 2 GASFLSTVPFMLPIVPPPSRSAFSTVATRCSAHAGAIRCHKIETQITVEAGFGRRDILKC 61
G SFLSTVP + +T+++ S + IR F RRD+LK
Sbjct: 3 GVSFLSTVP---SFTNTTNHQHLTTLSSSSSHRSAVIRS------------FHRRDVLKL 47
Query: 62 IGATIGMEIISSS--GSVEMARAADLIQRRQRSEFISNIKETLQTALKGNPDLIPSLLTL 119
G +GME+I + V A AADL QRRQRSE S IK TL +A+K P+L+PS+L L
Sbjct: 48 TGTAMGMELIGNGFINHVGDANAADLNQRRQRSELQSKIKITLSSAIKAKPELLPSILKL 107
Query: 120 ALNDAMTYDKVRTKPLRFKCLVDVIKFLYLLWRKEGNKLMSCWLSL 165
ALNDAMTYDK + I+F L R E N+ +S LSL
Sbjct: 108 ALNDAMTYDKA----TKSGGANGSIRFSSELSRAE-NEGLSDGLSL 148
>gi|148906845|gb|ABR16568.1| unknown [Picea sitchensis]
Length = 354
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 70/103 (67%), Gaps = 1/103 (0%)
Query: 28 ATRCSAHAGAIRCHKIETQITVEAGFGRRDILKCIGATIGMEIISS-SGSVEMARAADLI 86
+ +C+ + + ++ ++ + + R DI+ A G+ +I S S ++E+A AADLI
Sbjct: 32 SVKCNVNHDQVHNQNVQVSVSEQGKYSRSDIMLGSCAIAGVTVIWSLSPALEIANAADLI 91
Query: 87 QRRQRSEFISNIKETLQTALKGNPDLIPSLLTLALNDAMTYDK 129
QR+QR +F++ IK +L+ A++ +P+L+PS++ LALNDA+TYDK
Sbjct: 92 QRQQRGQFLTIIKTSLRNAIQAHPELVPSIMRLALNDAITYDK 134
>gi|302819319|ref|XP_002991330.1| hypothetical protein SELMODRAFT_133248 [Selaginella moellendorffii]
gi|300140910|gb|EFJ07628.1| hypothetical protein SELMODRAFT_133248 [Selaginella moellendorffii]
Length = 276
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 76 SVEMARAADLIQRRQRSEFISNIKETLQTALKGNPDLIPSLLTLALNDAMTYDK 129
S + A AADLIQR QR++F+ IK L A+K NP+L+P LL LALNDA+TYDK
Sbjct: 3 STDNAMAADLIQRSQRADFLGKIKVKLAKAIKENPELVPFLLRLALNDAITYDK 56
>gi|302812536|ref|XP_002987955.1| hypothetical protein SELMODRAFT_126894 [Selaginella moellendorffii]
gi|300144344|gb|EFJ11029.1| hypothetical protein SELMODRAFT_126894 [Selaginella moellendorffii]
Length = 273
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 76 SVEMARAADLIQRRQRSEFISNIKETLQTALKGNPDLIPSLLTLALNDAMTYDK 129
S + A AADLIQR QR++F+ IK L A+K NP+L+P LL LALNDA+TYDK
Sbjct: 3 STDNAMAADLIQRSQRADFLGKIKVKLAKAIKENPELVPFLLRLALNDAITYDK 56
>gi|342351105|pdb|3RRW|A Chain A, Crystal Structure Of The Tl29 Protein From Arabidopsis
Thaliana
gi|342351106|pdb|3RRW|B Chain B, Crystal Structure Of The Tl29 Protein From Arabidopsis
Thaliana
Length = 268
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/48 (68%), Positives = 36/48 (75%)
Query: 83 ADLIQRRQRSEFISNIKETLQTALKGNPDLIPSLLTLALNDAMTYDKV 130
ADL QRRQRSEF S IK L T +K P+L+PSLL LALNDA TYDK
Sbjct: 2 ADLNQRRQRSEFQSKIKILLSTTIKAKPELVPSLLKLALNDAXTYDKA 49
>gi|225459219|ref|XP_002284058.1| PREDICTED: DUF246 domain-containing protein At1g04910-like [Vitis
vinifera]
Length = 730
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/54 (64%), Positives = 39/54 (72%), Gaps = 10/54 (18%)
Query: 87 QRRQRSEF----------ISNIKETLQTALKGNPDLIPSLLTLALNDAMTYDKV 130
Q RQRSEF +N+K TL TA+KGNPD+IPSLLTLALNDAMTYDK
Sbjct: 528 QLRQRSEFRCKFSKYLTFSANVKGTLFTAIKGNPDIIPSLLTLALNDAMTYDKA 581
>gi|168016091|ref|XP_001760583.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688280|gb|EDQ74658.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 269
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 37/50 (74%)
Query: 80 ARAADLIQRRQRSEFISNIKETLQTALKGNPDLIPSLLTLALNDAMTYDK 129
A+AAD+IQR+QR F+S+ + A + NP+ IP LL LALNDA+TYDK
Sbjct: 1 AQAADIIQRQQRGIFLSDQFNIVPYAFQANPEYIPDLLKLALNDALTYDK 50
>gi|6226236|sp|P81833.1|TL29_SPIOL RecName: Full=Thylakoid lumenal 29 kDa protein, chloroplastic;
Short=TL29; AltName: Full=P29
Length = 30
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 22/30 (73%), Positives = 24/30 (80%)
Query: 83 ADLIQRRQRSEFISNIKETLQTALKGNPDL 112
ADLIQRRQRSEF S+IK L T +K NPDL
Sbjct: 1 ADLIQRRQRSEFQSDIKGILYTVIKKNPDL 30
>gi|319993039|emb|CBY94068.1| ascorbate peroxidase [Fagus sylvatica]
Length = 115
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 108 GNPDLIPSLLTLALNDAMTYDKVRTKPLRFKCLVDVIKFLYLLWRKEGNKLMSCWLSL 165
GN DLIPSLLTLALNDA TYDK + I+F L R E NK +S L+L
Sbjct: 1 GNTDLIPSLLTLALNDATTYDKA----TKSGGPNGSIRFSSELSRPE-NKGLSAALNL 53
>gi|168010492|ref|XP_001757938.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690815|gb|EDQ77180.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 244
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 18/24 (75%), Positives = 21/24 (87%)
Query: 106 LKGNPDLIPSLLTLALNDAMTYDK 129
L+ NPD+IP LL LALNDA+TYDK
Sbjct: 1 LQANPDIIPDLLKLALNDALTYDK 24
>gi|452823924|gb|EME30930.1| ascorbate peroxidase [Galdieria sulphuraria]
Length = 403
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 95 ISNIKETLQTALKGNPDLIPSLLTLALNDAMTYDKVRTK-----PLRFK 138
I+ +K+TL+ L N DL+P + LAL+DA++Y K K LRF+
Sbjct: 119 INRLKQTLRNTLSKNLDLLPQYIQLALHDALSYSKQTKKGGLNGSLRFE 167
>gi|332523744|ref|ZP_08399996.1| aspartate--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
gi|332315008|gb|EGJ27993.1| aspartate--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
Length = 582
Score = 37.4 bits (85), Expect = 2.2, Method: Composition-based stats.
Identities = 29/134 (21%), Positives = 63/134 (47%), Gaps = 15/134 (11%)
Query: 32 SAHAGAIRCHKIETQITVEAGFGRRDILKCIGATIGMEIISSSGSVEMA-----RAADLI 86
S +AG +R I ++T++ GRR + +G I +++ G +++ AD++
Sbjct: 4 SMYAGHVRSEHIGQELTLKGWVGRR---RDLGGLIFIDLRDREGIMQLVINPEETNADVV 60
Query: 87 QRRQ--RSEFISNIKETLQTALKGNPDLIPSLLTLALNDAMTYDKVRTKPLRFKCLVDV- 143
+ + RSE++ ++ +Q + N L + L + + + +T P K V+V
Sbjct: 61 KNAEAIRSEYVIEVQGVVQERQQANDQLATGSVELKVTELTILNTSKTTPFEIKDAVEVG 120
Query: 144 ----IKFLYLLWRK 153
+++ YL R+
Sbjct: 121 DETRLRYRYLDLRR 134
>gi|312865833|ref|ZP_07726055.1| aspartate--tRNA ligase [Streptococcus downei F0415]
gi|311098708|gb|EFQ56930.1| aspartate--tRNA ligase [Streptococcus downei F0415]
Length = 582
Score = 35.8 bits (81), Expect = 5.6, Method: Composition-based stats.
Identities = 23/114 (20%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 32 SAHAGAIRCHKIETQITVEAGFGRRDILKCIGATIGMEIISSSGSVEMARAADLIQRR-- 89
S +AG +R I +Q+T++ GRR + +G + +++ G +++ + + +
Sbjct: 4 SIYAGRVRSEHIGSQLTLKGWVGRR---RDLGGLVFIDLRDREGIMQLVINPEQVSKEIM 60
Query: 90 -----QRSEFISNIKETLQTALKGNPDLIPSLLTLALNDAMTYDKVRTKPLRFK 138
R+E++ + T Q + N L + L ++D + + +T P K
Sbjct: 61 DKAESLRTEYVIEVTGTAQAREQANDKLATGAVELQVSDLVILNTSKTTPFEIK 114
>gi|163840498|ref|YP_001624903.1| DNA helicase [Renibacterium salmoninarum ATCC 33209]
gi|162953974|gb|ABY23489.1| DNA helicase [Renibacterium salmoninarum ATCC 33209]
Length = 1385
Score = 35.8 bits (81), Expect = 6.1, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 29/67 (43%)
Query: 14 PIVPPPSRSAFSTVATRCSAHAGAIRCHKIETQITVEAGFGRRDILKCIGATIGMEIISS 73
P+ P R F+ TR H + C K E T +G RD + + +G IS+
Sbjct: 1123 PLSAPDGRGKFALAMTRAREHLSVLSCFKPEDLDTSRLNYGARDFYQLLARELGGTQISA 1182
Query: 74 SGSVEMA 80
+ + +A
Sbjct: 1183 TNASRIA 1189
>gi|425777612|gb|EKV15772.1| L-serine dehydratase, putative [Penicillium digitatum PHI26]
gi|425782643|gb|EKV20542.1| L-serine dehydratase, putative [Penicillium digitatum Pd1]
Length = 438
Score = 35.8 bits (81), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Query: 1 MGASFLSTVPFMLPIVPPPSRSAFSTVATRCSAHAGAIRCHKIETQITVEAGFGRRDILK 60
+GA +S + + PPP STV + A G +R E ++ VE G
Sbjct: 272 LGAVRVSETTYQYAVSPPPGIKVHSTVLSDAEAARGVLRLANDE-RLLVELACG-----V 325
Query: 61 CIGATIGMEIISSSGSVEMARAADLIQRRQRSEFISNI 98
CI A IG + SV A I++R+RS +++
Sbjct: 326 CIEAAIGDAATAVPASVTTGTGARGIKKRKRSSVETDV 363
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.324 0.136 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,330,410,819
Number of Sequences: 23463169
Number of extensions: 79440566
Number of successful extensions: 296934
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 296867
Number of HSP's gapped (non-prelim): 38
length of query: 165
length of database: 8,064,228,071
effective HSP length: 126
effective length of query: 39
effective length of database: 9,402,836,073
effective search space: 366710606847
effective search space used: 366710606847
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 71 (32.0 bits)