Citrus Sinensis ID: 046965

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280------
Protein Sequence
MKALFLEASSAEASSIILASSSEETSCMGKSDENKRMKMKHVVDAIDESRRPESSSSLLLDLRLYNDDYLVCGSGLFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGNQHFSFYSPYYSRFSPYYGSFNRSLGVKMNSMIHKPVAYGSHPWPSANYRFGLGSWLVRQGMNMKDPQQTRMRMNGLGISGPSSRFEERDALAATNIIHKDNPIGVDFLQRGDPFKSDHQEDPTELDLSLKL
Secondary Structure (PSIPRED)
ccccccccccHHHHHHccccccccccccccccHHHHHHccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccEEEcccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccEEEEEcccccccccccccccHHccHccccccccccccccccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccEEEEccccccccccHHccccHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEcc
Coil and Loop (DISEMBL)
MKALFLEASSAEASSIILASsseetscmgksdenkRMKMKHVVDAidesrrpessssllldlrlynddylvcgsgLFNRMsmmnnnhcheennghptssekkssearvfscnyckrefstsqalgghqnahKQERAVAKrrqgvdqdvgaaafgnqhfsfyspyysrfspyygsfnrslgvkmnsmihkpvaygshpwpsanyrfglGSWLVrqgmnmkdpqqtrmrmnglgisgpssrfEERDALAATniihkdnpigvdflqrgdpfksdhqedpteldlslkl
Flexible Loop (DISEMBL)
mkalfleassaeassiilassseetscmgksdenkrmKMKHVVdaidesrrpessssllldlrLYNDDYLVCGSGLFNRMSMMNNNHCHEENNGhptssekksseARVFSCNYCKREFStsqalgghqnAHKQERAVAKRRQGVDQDVGAAAFGNQHFSFYSPYYSRFSPYYGSFNRSLGVKMNSMIHKPVAYGSHPWPSANYRFGLGSWLVRQGMNMKDPQQTRMRMNGLGISGPSSRFEERDALAATniihkdnpigVDFLQRGDPfksdhqedpteldlslkl
Low Complexity Region (SEG)
MKALFleassaeassiilassseeTSCMGKSDENKRMKMKHVVDAIdesrrpessssllldlrlYNDDYLVCGSGLFNRMSmmnnnhcheennGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGNQHfsfyspyysrfspyygsfNRSLGVKMNSMIHKPVAYGSHPWPSANYRFGLGSWLVRQGMNMKDPQQTRMRMNGLGISGPSSRFEERDALAATNIIHKDNPIGVDFLQRGDPFKSDHQEDPTELDLSLKL
Disordered region (IsUnstruct)
**********************************************************LLDLRLYNDDYLVCGSGLFNRM***************************VFSCNYCKR******************************DVGAAAFGNQHFSFYSPYYSRFSPYYGSFNRSLGVKMNSMIHKPVAYGSHPWPSANYRFGLGSWLVRQ********************************AATNIIHKDNPIGVDFL***********************
Disordered Region (DISOPRED)
**************************************************************************************************************CNYCKREFSTSQALGGH***************************************RFSPYYGSF********************************************************************************************************LDLSLKL
Disordered Region (DISEMBL)
*************SSIILASS************NKRMKMKHVVDAI**********SLLLDLRLYNDDYLVCGSGLFNRMSMMNNNHCHE*****************VFSCNYCKREFSTS***********************DQDVGAAAFGNQHFSFYSPYYSRFSPYYGSFNRSLGVKMNSMIHKPVAYGSHPWPSANYRFGLGSWLVRQGMNMKDPQQTRMRMNGLGISGPSSRFEERDALAATNIIHKDNPIGVDFLQRGDPFK****************
Disordered Region (DISPRO)
********************************************************SLLLDLRLYNDDYLV*GSGL*****************************ARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGNQHFSFYSPYYSRFSPYYGSFNRSLGVKMNSMIHKPVAYGSHPWPSANYRFGLGSWLVRQGMNMKDPQQTRMRMNGLGISGPSSRFEERDALAATNIIHKDNPIGVD*LQRG************ELDL****
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MKALFLEASSAEASSIILASSSEETSCMGKSDENKRMKMKHVVDAIDESRRPESSSSLLLDLRLYNDDYLVCGSGLFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGNQHFSFYSPYYSRFSPYYGSFNRSLGVKMNSMIHKPVAYGSHPWPSANYRFGLGSWLVRQGMNMKDPQQTRMRMNGLGISGPSSRFEERDALAATNIIHKDNPIGVDFLQRGDPFKSDHQEDPTELDLSLKL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	286	2.2.26 [Sep-21-2011]
Q39262	235	Zinc finger protein 3 OS=	no	no	0.286	0.348	0.483	1e-15
Q42485	228	Zinc finger protein 1 OS=	no	no	0.311	0.390	0.459	4e-15
Q39266	209	Zinc finger protein 7 OS=	no	no	0.153	0.210	0.681	8e-11
Q39263	260	Zinc finger protein 4 OS=	no	no	0.346	0.380	0.383	2e-10
Q9FFX4	161	Zinc finger protein KNUCK	no	no	0.132	0.236	0.710	6e-10
Q39261	150	Zinc finger protein 2 OS=	no	no	0.125	0.24	0.722	3e-09
Q39265	197	Zinc finger protein 6 OS=	no	no	0.244	0.355	0.435	7e-09
Q38895	204	Transcriptional regulator	no	no	0.125	0.176	0.5	4e-05
Q6S591	253	Zinc finger protein JAGGE	no	no	0.251	0.284	0.362	6e-05
Q9LHS9	226	Probable transcriptional	no	no	0.122	0.154	0.514	9e-05

>sp|Q39262|ZFP3_ARATH Zinc finger protein 3 OS=Arabidopsis thaliana GN=ZFP3 PE=2 SV=1

 Score = 83.6 bits (205), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 45/93 (48%), Positives = 63/93 (67%), Gaps = 11/93 (11%)

Query: 103 SSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGNQHFSFYS 162
           S+E ++FSCNYC+R F +SQALGGHQNAHK+ER +AKR Q +     A+AFG+       
Sbjct: 55  STEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRM--AASASAFGH------- 105

Query: 163 PYYSRFSPYYGSFN--RSLGVKMNSMIHKPVAY 193
           PY     P++G +N  RSLG++ +S+ HK  +Y
Sbjct: 106 PYGFSPLPFHGQYNNHRSLGIQAHSISHKLSSY 138

Arabidopsis thaliana (taxid: 3702)

>sp|Q42485|ZFP1_ARATH Zinc finger protein 1 OS=Arabidopsis thaliana GN=ZFP1 PE=2 SV=1

 Score = 82.4 bits (202), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 45/98 (45%), Positives = 63/98 (64%), Gaps = 9/98 (9%)

Query: 104 SEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGNQHFSFYSP 163
           ++ RVFSCNYC+R+F +SQALGGHQNAHK+ER +AKR Q     +  ++  +  F+F   
Sbjct: 63  ADPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQYYKMTL--SSLPSSAFAFGHG 120

Query: 164 YYSRFS-----PYYGSFNR--SLGVKMNSMIHKPVAYG 194
             SRF+     P +GS N   +LG++ +S IHKP   G
Sbjct: 121 SVSRFASMASLPLHGSVNNRSTLGIQAHSTIHKPSFLG 158

Arabidopsis thaliana (taxid: 3702)

>sp|Q39266|ZFP7_ARATH Zinc finger protein 7 OS=Arabidopsis thaliana GN=ZFP7 PE=2 SV=1

 Score = 67.8 bits (164), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 30/44 (68%), Positives = 36/44 (81%)

Query: 97  TSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR 140
           T S K  +  RVFSCNYC+R+F +SQALGGHQNAHK+ER +AKR
Sbjct: 47  TKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKR 90

Arabidopsis thaliana (taxid: 3702)

>sp|Q39263|ZFP4_ARATH Zinc finger protein 4 OS=Arabidopsis thaliana GN=ZFP4 PE=2 SV=2

 Score = 66.6 bits (161), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 41/107 (38%), Positives = 59/107 (55%), Gaps = 8/107 (7%)

Query: 90  EENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR--RQGVDQD 147
           E +N      ++ S   RVFSCNYC+R+F +SQALGGHQNAHK+ER +AKR  R G+   
Sbjct: 66  ESSNPEQQQQQQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGLAGV 125

Query: 148 VGAAAFGNQHFSFYSPYYSRFSPYYGSFN------RSLGVKMNSMIH 188
                  + + +  +       P +GS N      R+LG++ +S  H
Sbjct: 126 FPGRGSSSNYAAAATAAALSCLPLHGSGNGNMTSFRTLGIRAHSSAH 172

Arabidopsis thaliana (taxid: 3702)

>sp|Q9FFX4|KNU_ARATH Zinc finger protein KNUCKLES OS=Arabidopsis thaliana GN=KNU PE=1 SV=1

 Score = 65.1 bits (157), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 27/38 (71%), Positives = 31/38 (81%)

Query: 107 RVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGV 144
           R+F C YC R+F TSQALGGHQNAHK+ERA A+R  GV
Sbjct: 36  RLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRNLGV 73

May function as a transcriptional repressor of cellular proliferation that regulates floral determinacy and relative size of basal pattern elements along the proximo-distal axis of the developing gynoecium.

Arabidopsis thaliana (taxid: 3702)

>sp|Q39261|ZFP2_ARATH Zinc finger protein 2 OS=Arabidopsis thaliana GN=ZFP2 PE=2 SV=1

 Score = 62.8 bits (151), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 26/36 (72%), Positives = 32/36 (88%)

Query: 105 EARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR 140
           + RVFSCNYC+R+F +SQALGGHQNAHK ER +AK+
Sbjct: 48  QPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKK 83

Arabidopsis thaliana (taxid: 3702)

>sp|Q39265|ZFP6_ARATH Zinc finger protein 6 OS=Arabidopsis thaliana GN=ZFP6 PE=2 SV=1

 Score = 61.6 bits (148), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 34/78 (43%), Positives = 45/78 (57%), Gaps = 8/78 (10%)

Query: 96  PTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGN 155
           P       SE+R + C YC REF+ SQALGGHQNAHK+ER + KR Q +     A     
Sbjct: 28  PRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQML-----ATRGLP 82

Query: 156 QHFSFY---SPYYSRFSP 170
           +H +F+   +P  S F+P
Sbjct: 83  RHHNFHPHTNPLLSAFAP 100

Arabidopsis thaliana (taxid: 3702)

>sp|Q38895|SUP_ARATH Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana GN=SUP PE=1 SV=1

 Score = 49.3 bits (116), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 18/36 (50%), Positives = 29/36 (80%)

Query: 107 RVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ 142
           R ++C++CKREF ++QALGGH N H+++RA  + +Q
Sbjct: 45  RSYTCSFCKREFRSAQALGGHMNVHRRDRARLRLQQ 80

Probable transcriptional regulator considered as cadastral protein that acts indirectly to prevent the B class homeotic proteins APETALA3 and perhaps PISTILLATA from acting in the gynoecial whorl. Principal function is to balance cell proliferation in the third and fourth whorls of developing flowers thereby maintaining the boundary between stamens and carpels. May fulfill this role by repressing genes implicated in cell division. Plays equally a role in the determinacy of the floral meristem. Is also required for normal ovule development.

Arabidopsis thaliana (taxid: 3702)

>sp|Q6S591|JAG_ARATH Zinc finger protein JAGGED OS=Arabidopsis thaliana GN=JAG PE=2 SV=1

 Score = 48.5 bits (114), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 8/80 (10%)

Query: 98  SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQER---AVAKRRQGVDQD-----VG 149
           S E K    +V+ C +C  +F  SQALGGH N H+QER    + + RQ V ++      G
Sbjct: 40  SKEGKDESGKVYECRFCSLKFCKSQALGGHMNRHRQERETETLNQARQLVYRNDTITPPG 99

Query: 150 AAAFGNQHFSFYSPYYSRFS 169
            + FG  H +  + Y S +S
Sbjct: 100 ISPFGYHHTTDPTIYRSVYS 119

Controls the morphogenesis of lateral organs. Functions in lateral organ shape and is sufficient to induce proliferation and growth of lateral organ tissue. Is necessary and sufficient for bract formation, but its expression is excluded from the cryptic bract, which could be a cause of bractless flowers in Arabidopsis. Participates with FIL and YAB3 in regulating valve margin development. Functions with JGL to define stamen and carpel shape. Functions with AS1 and AS2 in the sepal and petal primordia to repress boundary-specifying genes for normal development of the organs.

Arabidopsis thaliana (taxid: 3702)

>sp|Q9LHS9|RBE_ARATH Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana GN=RBE PE=2 SV=2

 Score = 47.8 bits (112), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 18/35 (51%), Positives = 28/35 (80%)

Query: 107 RVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR 141
           R +SC++C REF ++QALGGH N H+++RA  K++
Sbjct: 53  RSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQ 87

Probable transcriptional regulator essential for petal development. Required for the early development of the organ primordia of the second whorl. Acts downstream of AP1 and PTL.

Arabidopsis thaliana (taxid: 3702)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
224073047	298	predicted protein [Populus trichocarpa]	0.954	0.916	0.440	8e-44
224096924	298	predicted protein [Populus trichocarpa]	0.954	0.916	0.437	7e-43
147838400	467	hypothetical protein VITISV_006325 [Viti	0.912	0.558	0.425	4e-40
224142551	294	predicted protein [Populus trichocarpa]	0.933	0.908	0.418	4e-39
224120338	258	predicted protein [Populus trichocarpa]	0.825	0.914	0.410	7e-34
147769444	295	hypothetical protein VITISV_037013 [Viti	0.632	0.613	0.470	2e-33
224142553	303	predicted protein [Populus trichocarpa]	0.839	0.792	0.408	2e-33
255569173	289	conserved hypothetical protein [Ricinus	0.860	0.851	0.394	5e-32
225430380	286	PREDICTED: zinc finger protein 3-like [V	0.951	0.951	0.336	1e-21
296082081	252	unnamed protein product [Vitis vinifera]	0.839	0.952	0.344	3e-21

>gi|224073047|ref|XP_002303956.1| predicted protein [Populus trichocarpa] gi|222841388|gb|EEE78935.1| predicted protein [Populus trichocarpa]

 Score =  183 bits (464), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 137/311 (44%), Positives = 182/311 (58%), Gaps = 38/311 (12%)

Query: 1   MKALFLEASSAEASSIILASSSEETSCMGKSDENKR----MKMKH-VVDAIDESRRPESS 55
           M+++  E   +  S+I  +++SEET C    D +++    +KMK  VV   +    P+SS
Sbjct: 1   MESIGAERCPSRTSNI--SAASEETLCRHSGDHDQKNMINLKMKEKVVSGTEPLTLPDSS 58

Query: 56  SS-LLLDLRLYNDDYLVCGSGLFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC 114
           SS +LLDL+L NDD L      FN  S +N    H   +   T    K +++RVFSC+YC
Sbjct: 59  SSPVLLDLKLSNDDSLGGSKLEFNLFSPINAGSFHANESIDET---LKLADSRVFSCSYC 115

Query: 115 KREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGNQHFSFYSPYYSRFSPYYGS 174
           KREFSTSQALGGHQNAHKQERA+AKRRQG+D D    AFG  HF +Y        PYYGS
Sbjct: 116 KREFSTSQALGGHQNAHKQERAIAKRRQGMDVD----AFG--HFPYYPCSNPSTHPYYGS 169

Query: 175 FNRSLGVKMNSMIHKPVAYGSHPWPSANYRFGLGSWLVRQGMNMKDPQQTRMRMNGL--- 231
           FNRSLG++M+S+I KP +Y      S+ YRFGLG W  +  MN +     R+RM  L   
Sbjct: 170 FNRSLGMEMDSLIRKPSSYPWS-TSSSGYRFGLGGWSRQAMMNAQPTSIDRLRMESLNSL 228

Query: 232 -GISGPSS-------RFEERDAL-------AATNI-IHKDNPIGVDFLQRGDPFKSDHQE 275
            G  G S+       RFE+ + L       +++NI  +K + I +D LQ  +P KSD Q 
Sbjct: 229 NGRYGNSTASSSSSSRFEDINDLFRNFGGSSSSNIATNKPSNIDIDQLQLIEPPKSD-QA 287

Query: 276 DPTELDLSLKL 286
           +P  LDLSLKL
Sbjct: 288 NPLGLDLSLKL 298

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224096924|ref|XP_002334654.1| predicted protein [Populus trichocarpa] gi|222874066|gb|EEF11197.1| predicted protein [Populus trichocarpa]

 Score =  180 bits (456), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 136/311 (43%), Positives = 180/311 (57%), Gaps = 38/311 (12%)

Query: 1   MKALFLEASSAEASSIILASSSEETSCMGKSDENKR----MKMKH-VVDAIDESRRPESS 55
           M+++  E   +  S+I  +++SEET C    D +++    +KMK  VV   +    P+SS
Sbjct: 1   MESIGAERCPSRTSNI--SAASEETLCRHSGDHDQKNMINLKMKEKVVSGTEPLTLPDSS 58

Query: 56  SS-LLLDLRLYNDDYLVCGSGLFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC 114
           SS +LLDL+L NDD L      FN  S +N    H   +   T    K +++RVFSC+YC
Sbjct: 59  SSPVLLDLKLSNDDSLGGSKLEFNLFSPINAGSFHANESIDET---LKPADSRVFSCSYC 115

Query: 115 KREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGNQHFSFYSPYYSRFSPYYGS 174
           KREFSTSQALGGHQNAHKQERA+AKR QG+D D    AFG  HF +Y        PYYGS
Sbjct: 116 KREFSTSQALGGHQNAHKQERAIAKRHQGMDVD----AFG--HFPYYPCSNPSTHPYYGS 169

Query: 175 FNRSLGVKMNSMIHKPVAYGSHPWPSANYRFGLGSWLVRQGMNMKDPQQTRMRMNGL--- 231
           FNRSLG++M+S+I KP +Y      S+ YRFGLG W  +  MN +     R+RM  L   
Sbjct: 170 FNRSLGMEMDSLIRKPSSYPWS-TSSSGYRFGLGGWSRQAMMNAQPTSIDRLRMESLNSL 228

Query: 232 -GISGPSS-------RFEERDAL-------AATNI-IHKDNPIGVDFLQRGDPFKSDHQE 275
            G  G S+       RFE+ + L       +++NI  +K + I  D LQ  +P KSD Q 
Sbjct: 229 NGRYGNSTASSSSSSRFEDINDLFRNFGGSSSSNIATNKPSNIDTDQLQLIEPPKSD-QA 287

Query: 276 DPTELDLSLKL 286
           +P  LDLSLKL
Sbjct: 288 NPLGLDLSLKL 298

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147838400|emb|CAN74318.1| hypothetical protein VITISV_006325 [Vitis vinifera]

 Score =  171 bits (432), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 135/317 (42%), Positives = 169/317 (53%), Gaps = 56/317 (17%)

Query: 1   MKALFLE-ASSAEASSIILASSSEETSCMGKSDENKRMKMKHVVDAIDESRRPESSSSLL 59
           M+AL ++    +E SSI   S++ E +     +  K++KMK  V   +E R+ E+ S+LL
Sbjct: 176 MEALGVDHQCPSEGSSI---SATSEGTPTKDGERAKKVKMKGKVS--EEERKTETGSNLL 230

Query: 60  LDLRLYNDDYLVCGSGLFNRMSMMNNNHCHEENNG----HPTSSEKKSSEARVFSCNYCK 115
           LDLRL NDD            S ++ N C+               +K  E RVFSCN+CK
Sbjct: 231 LDLRLSNDD------------SKVDLNLCNSLRTASSPERTVMVREKQPERRVFSCNFCK 278

Query: 116 REFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGNQHFSFYSPYYSRFS-PYYGS 174
           REFSTSQALGGHQNAHKQERA+AKRRQG+D       FG+ HF +  PY S    P YGS
Sbjct: 279 REFSTSQALGGHQNAHKQERAIAKRRQGMDM----PGFGHPHFHYNYPYSSIPPVPLYGS 334

Query: 175 FNRSLGVKMNSMIHK--PVAYGSHPWPSANYRFGLGSWLVRQGMNMKDPQ---------Q 223
           FNRSLGV+M+SMIHK         P P   YRFG G WL     NM  PQ         +
Sbjct: 335 FNRSLGVRMDSMIHKPPYPWTPQPPPPPPGYRFGHGGWLRP---NMMSPQSAFEHRIMRR 391

Query: 224 TRMRMNGLGI----SGPSSRFEERD-ALAATNI---------IHKDNPIGVDFLQRGDPF 269
               M+G G+    +GPSSRFEE D A+++  +         I  D   G D L +G   
Sbjct: 392 EDFHMHGGGVFGASTGPSSRFEESDGAISSLGVSNSNGDDPSIVADKASGGDDLWQGGHK 451

Query: 270 KSDHQEDPTELDLSLKL 286
            SD    P  LDLSLKL
Sbjct: 452 DSDQPGGPN-LDLSLKL 467

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142551|ref|XP_002324619.1| predicted protein [Populus trichocarpa] gi|222866053|gb|EEF03184.1| predicted protein [Populus trichocarpa]

 Score =  167 bits (423), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 131/313 (41%), Positives = 173/313 (55%), Gaps = 46/313 (14%)

Query: 1   MKALFLEASSAEASSIILASSSEETSCMG--------KSDENKRMKMKHVVDAIDESRRP 52
           M++   E S +E SSI   S++ E +  G        K D  K+MK K      + +  P
Sbjct: 1   MESSGTEKSPSEGSSI---SATSEGTPHGDGGDLDQTKMDSTKKMKEK-AARGSEPALLP 56

Query: 53  ESSSSLLLDLRLYNDDYLVCGSGLFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCN 112
           ESS+ +LL L+L +D   + GS  FN  S M+    H + +   TS   + +E+RVFSCN
Sbjct: 57  ESSARVLLGLKLSSDSS-IRGSKQFNLFSPMSAGSSHAKESTDETS---RQTESRVFSCN 112

Query: 113 YCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGNQHFSFYSPYYS-RFSPY 171
           +CKREFSTSQALGGHQNAHKQERA+AKRR+ +D    A+A G  H  +Y PY S   +PY
Sbjct: 113 FCKREFSTSQALGGHQNAHKQERALAKRRREMD----ASALG--HLPYY-PYSSLSTNPY 165

Query: 172 YGSFNRSLGVKMNSMIHKPVAYGSHPWPS-ANYRFGLGSWLVRQGMNMKDPQQTRMRM-- 228
           YGS NR+LGV+M+S IHK   Y    W S   +R+G  S   RQ +    P   R+R   
Sbjct: 166 YGSLNRALGVRMDSFIHKTSPYS---WTSPGGHRYGAHSGWPRQTLMNTQPSIDRLRTES 222

Query: 229 -----NGLGISGPSS--RFEE----RDALAAT----NIIHKDNPIGVDFLQRGDPFKSDH 273
                 G GIS  SS  RF++    R +  A+    NI     P   D +Q+ +P KSD 
Sbjct: 223 LNAFCGGFGISTSSSSPRFDDNGIVRSSFGASPSSNNITAIRKPPVTDHIQQINPPKSD- 281

Query: 274 QEDPTELDLSLKL 286
           Q D + LDLSLKL
Sbjct: 282 QTDESGLDLSLKL 294

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224120338|ref|XP_002331023.1| predicted protein [Populus trichocarpa] gi|222872953|gb|EEF10084.1| predicted protein [Populus trichocarpa]

 Score =  150 bits (378), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 112/273 (41%), Positives = 147/273 (53%), Gaps = 37/273 (13%)

Query: 34  NKRMKMKHVVDAIDESRRPESSSSLLLDLRLYNDDYLVCGSGLFNRMSMMNNNHCHEENN 93
           N  MK K VV   + +  P+SS+ +LLDL+L  D+ +      FN +S MN    H + +
Sbjct: 3   NTNMKEK-VVQGSEPALLPKSSARVLLDLKLSRDNSIRGSKLEFNLLSPMNVGSSHAKES 61

Query: 94  GHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAF 153
              T+   K +E+RVF CN+CKREFSTSQALGGHQNAHKQER +AKRRQ  + DVGA   
Sbjct: 62  ---TAETLKQTESRVFPCNFCKREFSTSQALGGHQNAHKQERTLAKRRQ--EMDVGALV- 115

Query: 154 GNQHFSFYSPYYS-RFSPYYGSFNRSLGVKMNSMIHKPVAYGSHPWPSANYRFGL----- 207
              H  +Y PY S   +PYYGS NRSLGV+++S+IHK      +PW S     GL     
Sbjct: 116 ---HLPYY-PYSSLSTNPYYGSLNRSLGVRLDSLIHK--TSPPYPWTSP---IGLRYDAH 166

Query: 208 GSWLVRQGMNMKDPQQTRMRMNGLGI--------SGPSSRFEERDAL------AATNIIH 253
           G W  +  MN +      +    L          S  SS   E + L       ++N + 
Sbjct: 167 GGWSGQTTMNTQPSNGKSLTTESLNAFSGGFGISSSSSSSRFEDNLLRNFGSSPSSNTVA 226

Query: 254 KDNPIGVDFLQRGDPFKSDHQEDPTELDLSLKL 286
            + P G D  Q+ D  KS +Q D + LDLSLKL
Sbjct: 227 INKPPGTDHFQQTDHPKS-YQTDDSGLDLSLKL 258

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|147769444|emb|CAN72493.1| hypothetical protein VITISV_037013 [Vitis vinifera]

 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 97/206 (47%), Positives = 119/206 (57%), Gaps = 25/206 (12%)

Query: 101 KKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGNQHFSF 160
           +K S+ RVFSCN+CKREFSTSQALGGHQNAHKQERA+AKRRQG+D       FG+ HF +
Sbjct: 95  EKQSDRRVFSCNFCKREFSTSQALGGHQNAHKQERAMAKRRQGMDM----PGFGHPHFHY 150

Query: 161 YSPYYSRFSPYYGSFNRSLGVKMNSMIHKPVAYGSHPWPSANYRFGLGSWLVRQGMNMKD 220
           Y+       P YGSFNRSLGV+M SMIHKP      P PS   +FG G WL    M+ + 
Sbjct: 151 YTYSSIPHVPLYGSFNRSLGVRMESMIHKPPYSWMAPPPSG-CQFGHGGWLRPTMMSPQS 209

Query: 221 PQQTRMR-----MNGLGIS------GPSSRFEERDALAATNIIHKDNPIGVDF------L 263
             + RMR     M+G G S      GPSS  E     A ++++   N  G D        
Sbjct: 210 SFEHRMRREDFQMHGGGSSGFGAPAGPSSTIEGSGGXAISSLVGGSNSNGNDSSILANKT 269

Query: 264 QRGD-PFKSDHQED--PTELDLSLKL 286
             GD P++  H+ED  P  L+L L L
Sbjct: 270 SGGDNPWQGGHKEDDQPGGLNLDLSL 295

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224142553|ref|XP_002324620.1| predicted protein [Populus trichocarpa] gi|222866054|gb|EEF03185.1| predicted protein [Populus trichocarpa]

 Score =  149 bits (375), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/279 (40%), Positives = 153/279 (54%), Gaps = 39/279 (13%)

Query: 32  DENKRMKMKH-VVDAIDESRRPESSSSLLLDLRLYNDDYLVCGSGLFNRMSMMN---NNH 87
           D ++ MKMK  VV   +    P+SS+  LLDL+ ++DD +      FN  S +N   ++H
Sbjct: 40  DHDQNMKMKERVVRGSEPPPFPKSSACGLLDLKPHSDDSIRGSKLEFNLFSPINVGYSSH 99

Query: 88  CHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQD 147
             E  +     + K+S+E RVFSC++C+R+FSTSQALGGHQNAHKQERA+AK+R+G D  
Sbjct: 100 AKESMD----EASKQSTEPRVFSCSFCRRKFSTSQALGGHQNAHKQERALAKKREGSDVG 155

Query: 148 VGAAAFGNQHFSFYSPYYS-RFSPYYGSFNRSLGVKMNSMIHKPVAYGSHPWPS-ANYRF 205
                F       Y+PY S   + YYGSFNR +GV+M+S+IHK   Y   PW S   YR 
Sbjct: 156 ATLGQFP------YNPYSSLPTNQYYGSFNRLVGVRMDSLIHKKQPY---PWNSFGGYRH 206

Query: 206 GLGSWLVRQGMNMKDPQQTRMR-----------MNGLGISGPSSRFEERDAL------AA 248
           G G W  RQ +    P   R+R                    SSRFE+ + L      + 
Sbjct: 207 GHGGW-SRQVLVSTQPSVDRLRAESSKAFSGVPFGNFSSPSSSSRFEDHNGLFRNPCASP 265

Query: 249 TNIIHKDNPIGVDFLQRGD-PFKSDHQEDPTELDLSLKL 286
           ++ I  + P   D LQR + P KSD Q D + LDLSLKL
Sbjct: 266 SSNIAFNMPPSTDHLQRPNRPPKSD-QTDGSGLDLSLKL 303

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255569173|ref|XP_002525555.1| conserved hypothetical protein [Ricinus communis] gi|223535134|gb|EEF36814.1| conserved hypothetical protein [Ricinus communis]

 Score =  144 bits (363), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 114/289 (39%), Positives = 152/289 (52%), Gaps = 43/289 (14%)

Query: 19  ASSSEETSCMGKSDENKRMKMKHVVDAIDESRRPESSSSLLLDLRLYNDDYLVCGSGL-F 77
           A++ +  S  GKS  + RMK +    A       E +S  LLDL+L ++   V GS L  
Sbjct: 23  ATAPKVGSDHGKSVIDLRMKRETAPTAY------EPNSRTLLDLKLSSEGS-VRGSRLDL 75

Query: 78  NRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAV 137
           N  +  +    HE+     T +EK+    RVFSCN+CKREFSTSQALGGHQNAHKQER +
Sbjct: 76  NLFNPASGGSSHEDQ----TVAEKQPERTRVFSCNFCKREFSTSQALGGHQNAHKQERQL 131

Query: 138 AKRRQGVDQDVGAAAFGNQHFSFYSPYYSRFS-PYYGSFNRSLGVKMNSMIHKPVAYGSH 196
           AKRR G+D      AFG  H+ +Y PY S    P+YGS +RSLGV+M S+I KP ++   
Sbjct: 132 AKRRHGMD----LGAFG--HYPYY-PYSSLSPHPFYGSISRSLGVRMESLIQKPSSF--- 181

Query: 197 PWPS------ANYRFGLGSWLVRQGMNMKDPQQTRMR------MNGLGISGPSSRFEE-- 242
           PW S      A +R+  G W  +Q M        R+R      +NG G+ G S RF+E  
Sbjct: 182 PWMSSSAGAGAAFRYSHGGWSRQQAMMNSQSSIDRLRAESLNTINGGGL-GTSPRFDENR 240

Query: 243 RDALAATNIIHKDNPIGVDFLQRGDPFK-----SDHQEDPTELDLSLKL 286
            + L         N +G+     GD  +     +  Q D   +DLSLKL
Sbjct: 241 NNTLPNVGASSSSNNLGIIKSSAGDNLRPAGRATGDQVDALGIDLSLKL 289

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225430380|ref|XP_002282938.1| PREDICTED: zinc finger protein 3-like [Vitis vinifera]

 Score =  109 bits (273), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/300 (33%), Positives = 157/300 (52%), Gaps = 28/300 (9%)

Query: 1   MKALFLEASSAEASSIILASSSEETSCMGKSDENKR----MKMKHVVDAIDESRRPESSS 56
           M+ L  E   +E S+II+ S+ E  SC  K  ++ +     + +   +  D  ++  +  
Sbjct: 1   MEQLRKEPCPSETSTIII-STPEAASCPDKPSQSPKEINLEEEEEEEEEEDHEKK--TKV 57

Query: 57  SLLLDLRLYNDDYLVCGSGLFNRMSMMNNNHCHEENNGHPTSSE---KKSSEARVFSCNY 113
            LL +L L++ D    G   FN  + +N   C   ++   TSSE      +E RVFSCNY
Sbjct: 58  DLLFNLELHSKDAADHG---FN--TELNLIDCLNTDSSQ-TSSEIPQPADAEPRVFSCNY 111

Query: 114 CKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGNQHFSFYSPYYSRFS--PY 171
           C+R+F +SQALGGHQNAHK+ER +AKR Q +   + AAA    H  F+  +YS  +  P 
Sbjct: 112 CQRKFYSSQALGGHQNAHKRERTLAKRGQRLGAPMVAAATAFGHPYFHHQHYSSMASLPL 171

Query: 172 YGSFNRSLGVKMNSMIHKPVAYGSHPWPSANYRFGLGSWLVRQGMNMKDPQQTRMRMNGL 231
           +G++NRSLG++++SMIHKP    + P   +   +G  SW  R  ++ + P   R+ +   
Sbjct: 172 HGAYNRSLGIQVHSMIHKPSL--TTPSSGSGNLYGHRSW-SRPPID-QQPAVGRLAVENC 227

Query: 232 --GIS-GPSSR--FEERDALAATNIIHKDNPIGVDFLQRGDPFKSDHQEDPTELDLSLKL 286
             G++ GP SR      D +        +  IG      G   K++ Q++  +LDLSLKL
Sbjct: 228 HEGVTAGPLSRGGIGRFDTVRMMINSQANEGIGGFCWTGGGRLKTN-QDELQKLDLSLKL 286

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|296082081|emb|CBI21086.3| unnamed protein product [Vitis vinifera]

 Score =  108 bits (269), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 144/264 (54%), Gaps = 24/264 (9%)

Query: 33  ENKRMKMKHVVDAIDESRRPE-SSSSLLLDLRLYNDDYLVCGSGLFNRMSMMNNNHCHEE 91
           E+K++K++ V    +E+  P+ +   LL +L L++ D    G   FN  + +N   C   
Sbjct: 3   EDKKIKLREV----NENSCPQLTKVDLLFNLELHSKDAADHG---FN--TELNLIDCLNT 53

Query: 92  NNGHPTSS--EKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVG 149
           ++   +S   +   +E RVFSCNYC+R+F +SQALGGHQNAHK+ER +AKR Q +   + 
Sbjct: 54  DSSQTSSEIPQPADAEPRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRGQRLGAPMV 113

Query: 150 AAAFGNQHFSFYSPYYSRFS--PYYGSFNRSLGVKMNSMIHKPVAYGSHPWPSANYRFGL 207
           AAA    H  F+  +YS  +  P +G++NRSLG++++SMIHKP    + P   +   +G 
Sbjct: 114 AAATAFGHPYFHHQHYSSMASLPLHGAYNRSLGIQVHSMIHKPSL--TTPSSGSGNLYGH 171

Query: 208 GSWLVRQGMNMKDPQQTRMRMNGL--GIS-GPSSR--FEERDALAATNIIHKDNPIGVDF 262
            SW  R  ++ + P   R+ +     G++ GP SR      D +        +  IG   
Sbjct: 172 RSW-SRPPID-QQPAVGRLAVENCHEGVTAGPLSRGGIGRFDTVRMMINSQANEGIGGFC 229

Query: 263 LQRGDPFKSDHQEDPTELDLSLKL 286
              G   K++ Q++  +LDLSLKL
Sbjct: 230 WTGGGRLKTN-QDELQKLDLSLKL 252

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	286
TAIR|locus:2183780	272	AT5G10970 "AT5G10970" [Arabido	0.615	0.647	0.340	1.6e-17
TAIR|locus:2146960	235	ZFP3 "AT5G25160" [Arabidopsis	0.611	0.744	0.326	2.6e-15
TAIR|locus:2025777	228	ZFP1 "AT1G80730" [Arabidopsis	0.426	0.535	0.346	3.3e-15
TAIR|locus:2159088	161	KNU "AT5G14010" [Arabidopsis t	0.174	0.310	0.6	1.2e-14
TAIR|locus:2181007	215	AT5G01860 "AT5G01860" [Arabido	0.167	0.223	0.666	2.3e-14
TAIR|locus:2174547	150	ZFP2 "AT5G57520" [Arabidopsis	0.153	0.293	0.636	3.9e-14
TAIR|locus:2825107	209	ZFP7 "AT1G24625" [Arabidopsis	0.195	0.267	0.540	2.4e-12
TAIR|locus:2013820	260	ZFP4 "AT1G66140" [Arabidopsis	0.157	0.173	0.638	1.4e-10
TAIR|locus:2019723	197	ZFP6 "AT1G67030" [Arabidopsis	0.164	0.238	0.574	2e-10
TAIR|locus:2156529	173	LATE "LATE FLOWERING" [Arabido	0.146	0.242	0.547	1.8e-09

TAIR|locus:2183780 AT5G10970 "AT5G10970" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 67/197 (34%), Positives = 97/197 (49%)

Query:    96 PTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGN 155
             P+ +   S+E ++FSCNYC+R F +SQALGGHQNAHK+ER +AKR Q +     AAAFG+
Sbjct:    91 PSFNGSTSTEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRM---ASAAAFGH 147

Query:   156 QHXXXXXXXXXXXXXXXXXXNRSLGVKMNSMIHKPVAYGSHPWPSANYRFGLGSW----L 211
              +                  NR+LG++ +SM HKP +Y  +        +G  +W    L
Sbjct:   148 PYGFAPVPFHGQYS------NRTLGIQAHSMSHKPSSYNVY-----GGEYGQINWSRIPL 196

Query:   212 VRQGMNMK-DPQQTRMRMNGLGISGPSSRFEERDALAATNIIHKDNPIGVDFLQRGDPF- 269
             V+Q    K    +     + + I+ P +   E         I  + P   +  QRG+   
Sbjct:   197 VQQPAIAKLTSTENHYNHHQMMIAPPLTSTCENIGRFDVGRIPVEFPTS-ELWQRGEELL 255

Query:   270 KSDHQEDPTELDLSLKL 286
             K   +E    LDLSLKL
Sbjct:   256 KPAEEEKQKNLDLSLKL 272

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2146960 ZFP3 "AT5G25160" [Arabidopsis thaliana (taxid:3702)]

 Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
 Identities = 62/190 (32%), Positives = 98/190 (51%)

Query:   103 SSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGNQHXXXXX 162
             S+E ++FSCNYC+R F +SQALGGHQNAHK+ER +AKR Q +     A+AFG+ +     
Sbjct:    55 STEQKLFSCNYCQRTFYSSQALGGHQNAHKRERTLAKRGQRMA--ASASAFGHPYGFSPL 112

Query:   163 XXXXXXXXXXXXXNRSLGVKMNSMIHKPVAY---GSHPWPSANY-RFGLGSW-LVRQGMN 217
                          +RSLG++ +S+ HK  +Y   G H +   N+ R        + +  +
Sbjct:   113 PFHGQYNN-----HRSLGIQAHSISHKLSSYNGFGGH-YGQINWSRLPFDQQPAIGKFPS 166

Query:   218 MKDPQQTRMRMNGLGISGPSSRFEERDALAATNIIHKDNPIGVDFL-QRGDPFKSDHQED 276
             M +      +M  +  S  +SR    D+ + T  + + +P    +   +G    + H E+
Sbjct:   167 MDNFHHHHHQMMMMAPS-VNSRSNNIDSPSNTGRVLEGSPTLEQWHGDKGLLLSTSHHEE 225

Query:   277 PTELDLSLKL 286
               +LDLSLKL
Sbjct:   226 QQKLDLSLKL 235

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2025777 ZFP1 "AT1G80730" [Arabidopsis thaliana (taxid:3702)]

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 44/127 (34%), Positives = 64/127 (50%)

Query:    73 GSGLFNRMSXXXXXXXXXXXXGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHK 132
             G+   + ++             H    +++ ++ RVFSCNYC+R+F +SQALGGHQNAHK
Sbjct:    32 GTATSSELNLIDSFKTSSSSTSHHQHQQEQLADPRVFSCNYCQRKFYSSQALGGHQNAHK 91

Query:   133 QERAVAKRRQGVDQDVGA---AAFGNQHXXXXXXXXXXXX-XXXXXXNRS-LGVKMNSMI 187
             +ER +AKR Q     + +   +AF   H                   NRS LG++ +S I
Sbjct:    92 RERTLAKRGQYYKMTLSSLPSSAFAFGHGSVSRFASMASLPLHGSVNNRSTLGIQAHSTI 151

Query:   188 HKPVAYG 194
             HKP   G
Sbjct:   152 HKPSFLG 158

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0009640 "photomorphogenesis" evidence=IEP

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

TAIR|locus:2159088 KNU "AT5G14010" [Arabidopsis thaliana (taxid:3702)]

 Score = 158 (60.7 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
 Identities = 30/50 (60%), Positives = 35/50 (70%)

Query:    95 HPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGV 144
             H  SS    +  R+F C YC R+F TSQALGGHQNAHK+ERA A+R  GV
Sbjct:    24 HSFSSSAHPASHRLFPCQYCPRKFYTSQALGGHQNAHKRERAAARRNLGV 73

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0009909 "regulation of flower development" evidence=IMP

GO:0010582 "floral meristem determinacy" evidence=IMP

TAIR|locus:2181007 AT5G01860 "AT5G01860" [Arabidopsis thaliana (taxid:3702)]

 Score = 184 (69.8 bits), Expect = 2.3e-14, P = 2.3e-14
 Identities = 32/48 (66%), Positives = 43/48 (89%)

Query:    98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD 145
             SS +  ++ARVF+C +CK+EFSTSQALGGHQNAHKQER++AKRR+ ++
Sbjct:    56 SSTRNEAKARVFACTFCKKEFSTSQALGGHQNAHKQERSLAKRRKEIE 103

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2174547 ZFP2 "AT5G57520" [Arabidopsis thaliana (taxid:3702)]

 Score = 153 (58.9 bits), Expect = 3.9e-14, Sum P(2) = 3.9e-14
 Identities = 28/44 (63%), Positives = 35/44 (79%)

Query:    97 TSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR 140
             T+S     + RVFSCNYC+R+F +SQALGGHQNAHK ER +AK+
Sbjct:    40 TNSSSCLEQPRVFSCNYCQRKFYSSQALGGHQNAHKLERTLAKK 83

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2825107 ZFP7 "AT1G24625" [Arabidopsis thaliana (taxid:3702)]

 Score = 165 (63.1 bits), Expect = 2.4e-12, P = 2.4e-12
 Identities = 33/61 (54%), Positives = 42/61 (68%)

Query:    97 TSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGNQ 156
             T S K  +  RVFSCNYC+R+F +SQALGGHQNAHK+ER +AKR   + +      FG+ 
Sbjct:    47 TKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGR-----MFGHH 101

Query:   157 H 157
             H
Sbjct:   102 H 102

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0046982 "protein heterodimerization activity" evidence=IPI

TAIR|locus:2013820 ZFP4 "AT1G66140" [Arabidopsis thaliana (taxid:3702)]

 Score = 157 (60.3 bits), Expect = 1.4e-10, P = 1.4e-10
 Identities = 30/47 (63%), Positives = 38/47 (80%)

Query:   100 EKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR--RQGV 144
             ++ S   RVFSCNYC+R+F +SQALGGHQNAHK+ER +AKR  R G+
Sbjct:    76 QQPSVSKRVFSCNYCQRKFYSSQALGGHQNAHKRERTLAKRAMRMGL 122

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

TAIR|locus:2019723 ZFP6 "AT1G67030" [Arabidopsis thaliana (taxid:3702)]

 Score = 147 (56.8 bits), Expect = 2.0e-10, P = 2.0e-10
 Identities = 27/47 (57%), Positives = 32/47 (68%)

Query:    96 PTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ 142
             P       SE+R + C YC REF+ SQALGGHQNAHK+ER + KR Q
Sbjct:    28 PRPGSGSGSESRKYECQYCCREFANSQALGGHQNAHKKERQLLKRAQ 74

GO:0003676 "nucleic acid binding" evidence=ISS

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA;ISS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0022626 "cytosolic ribosome" evidence=IDA

GO:0006826 "iron ion transport" evidence=RCA

GO:0010106 "cellular response to iron ion starvation" evidence=RCA

GO:0010167 "response to nitrate" evidence=RCA

GO:0015706 "nitrate transport" evidence=RCA

TAIR|locus:2156529 LATE "LATE FLOWERING" [Arabidopsis thaliana (taxid:3702)]

 Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
 Identities = 23/42 (54%), Positives = 33/42 (78%)

Query:    99 SEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR 140
             +++ +S  R+F C +C R+F +SQALGGHQNAHK+ER  A+R
Sbjct:    25 TDENTSSLRIFPCLFCSRKFHSSQALGGHQNAHKKERTAARR 66

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISM;IDA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0006355 "regulation of transcription, DNA-dependent" evidence=TAS

GO:0042752 "regulation of circadian rhythm" evidence=IMP

GO:0048579 "negative regulation of long-day photoperiodism, flowering" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Your Input: fgenesh4_pg.C_LG_III001744 hypothetical protein (298 aa) (Populus trichocarpa)

Predicted Functional Partners:

Sorry, there are no predicted associations at the current settings.

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	286
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.42
KOG2462	279	consensus C2H2-type Zn-finger protein [Transcripti	99.28
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	99.24
KOG3623	1007	consensus Homeobox transcription factor SIP1 [Tran	98.89
KOG3576	267	consensus Ovo and related transcription factors [T	98.87
KOG3576	267	consensus Ovo and related transcription factors [T	98.51
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.46
PHA02768	55	hypothetical protein; Provisional	98.36
KOG1074	958	consensus Transcriptional repressor SALM [Transcri	98.35
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.98
PHA02768	55	hypothetical protein; Provisional	97.9
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	97.82
PHA00733	128	hypothetical protein	97.79
PHA00616	44	hypothetical protein	97.77
PLN03086	567	PRLI-interacting factor K; Provisional	97.69
PLN03086	567	PRLI-interacting factor K; Provisional	97.2
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.07
KOG3608	467	consensus Zn finger proteins [General function pre	97.04
PHA00732	79	hypothetical protein	97.01
PHA00733	128	hypothetical protein	96.97
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	96.46
KOG3608	467	consensus Zn finger proteins [General function pre	96.34
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.18
PHA00732	79	hypothetical protein	96.13
PRK04860	160	hypothetical protein; Provisional	95.78
smart00355	26	ZnF_C2H2 zinc finger.	95.57
PHA00616	44	hypothetical protein	95.4
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	94.15
COG5189	423	SFP1 Putative transcriptional repressor regulating	93.94
KOG3993	500	consensus Transcription factor (contains Zn finger	93.9
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	93.14
KOG3993	500	consensus Transcription factor (contains Zn finger	92.23
COG5048	467	FOG: Zn-finger [General function prediction only]	91.95
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	91.37
PRK04860	160	hypothetical protein; Provisional	91.15
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	90.5
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	89.75
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	89.34
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	87.76
KOG2893	341	consensus Zn finger protein [General function pred	84.04
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	83.85
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	83.07
KOG2893	341	consensus Zn finger protein [General function pred	80.91

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.42  E-value=3.1e-14  Score=131.54  Aligned_cols=65  Identities=15%  Similarity=0.221  Sum_probs=39.3

Q ss_pred             ccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           80 MSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        80 ~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      +.|..|||.|..-= +++.|.|+|||||||.|..|+|+|...++|..||++|.+.|.|+|..|+|+
T Consensus       188 c~C~iCGKaFSRPW-LLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~Ks  252 (279)
T KOG2462|consen  188 CECGICGKAFSRPW-LLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKS  252 (279)
T ss_pred             cccccccccccchH-HhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhH
Confidence            34555555555332 234566666666666666666666666666666666666666666666666

>KOG2462 consensus C2H2-type Zn-finger protein [Transcription]

Probab=99.28  E-value=4.8e-13  Score=123.75  Aligned_cols=108  Identities=17%  Similarity=0.249  Sum_probs=67.3

Q ss_pred             CccCccccCCccchhhccCCCCCcccccC---CCceeecCCCCcccCCCccchhhhhhccCCccccccccCcchhhhhhh
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSS---EARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAA  152 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHt---geKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~~~~~a~~  152 (286)
                      ...++.|.+||+.++..+++- +|.++|-   ..+.|.|.+|+|.|.+-.+|+.|+++|+  -+++|..|||.+...-..
T Consensus       127 ~~~r~~c~eCgk~ysT~snLs-rHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLL  203 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLS-RHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLL  203 (279)
T ss_pred             cCCceeccccccccccccccc-hhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHh
Confidence            667788999998888777643 6777764   2456677777777777777777777766  466777777763222211


Q ss_pred             ccC--CCccCcCCCccCCCCCCC-CccccCCCCCCccCCCC
Q 046965          153 FGN--QHFSFYSPYYSRFSPYYG-SFNRSLGVKMNSMIHKP  190 (286)
Q Consensus       153 f~~--~H~~~~~py~s~~~p~~g-s~~r~lgl~~Hs~iHkp  190 (286)
                      -||  +|++.. ||+   |+.|+ .|....+||+|..+|-.
T Consensus       204 QGHiRTHTGEK-PF~---C~hC~kAFADRSNLRAHmQTHS~  240 (279)
T KOG2462|consen  204 QGHIRTHTGEK-PFS---CPHCGKAFADRSNLRAHMQTHSD  240 (279)
T ss_pred             hcccccccCCC-Ccc---CCcccchhcchHHHHHHHHhhcC
Confidence            222  233433 554   66666 55556667777777654

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=99.24  E-value=1.3e-12  Score=133.11  Aligned_cols=81  Identities=16%  Similarity=0.283  Sum_probs=72.2

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcchhhhhhhccC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGN  155 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~~~~~a~~f~~  155 (286)
                      +..+|.|.+|+|.|...+.+. +|.=-|+|.|||+|.+|.|+|..+..|..|+|.|.|||||.|..|+|.       |+|
T Consensus       891 e~gmyaCDqCDK~FqKqSSLa-RHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKR-------FSH  962 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQKQSSLA-RHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKR-------FSH  962 (1007)
T ss_pred             ccccchHHHHHHHHHhhHHHH-HhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhh-------ccc
Confidence            777899999999999887654 898899999999999999999999999999999999999999999999       554


Q ss_pred             C-----CccCcCCC
Q 046965          156 Q-----HFSFYSPY  164 (286)
Q Consensus       156 ~-----H~~~~~py  164 (286)
                      .     ||.+++.|
T Consensus       963 SGSYSQHMNHRYSY  976 (1007)
T KOG3623|consen  963 SGSYSQHMNHRYSY  976 (1007)
T ss_pred             ccchHhhhccchhc
Confidence            3     77766444

>KOG3623 consensus Homeobox transcription factor SIP1 [Transcription]

Probab=98.89  E-value=1.8e-10  Score=117.76  Aligned_cols=67  Identities=16%  Similarity=0.173  Sum_probs=58.2

Q ss_pred             cCccccCCccchhhccCCCCCcccccC-------------CCceeecCCCCcccCCCccchhhhhhccCCccccccccCc
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSS-------------EARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGV  144 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHt-------------geKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk  144 (286)
                      --|.|+.|-.+|+.+..+. +||.+|.             +-|.|+|.+|+|+|..+..|+.|.|||.|||||.|..|+|
T Consensus       239 ~nfsC~lCsytFAyRtQLE-rhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkK  317 (1007)
T KOG3623|consen  239 PNFSCMLCSYTFAYRTQLE-RHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKK  317 (1007)
T ss_pred             CCCcchhhhhhhhhHHHHH-HHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCccccc
Confidence            3477999999998776554 7777763             2478999999999999999999999999999999999999


Q ss_pred             c
Q 046965          145 D  145 (286)
Q Consensus       145 ~  145 (286)
                      .
T Consensus       318 R  318 (1007)
T KOG3623|consen  318 R  318 (1007)
T ss_pred             c
Confidence            9

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.87  E-value=1.7e-10  Score=103.36  Aligned_cols=71  Identities=14%  Similarity=0.125  Sum_probs=65.2

Q ss_pred             CCCccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           74 SGLFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        74 ~~e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      +.+.+.|+|--|||.|.-... +.+|++.|...|.|-|..|||.|.....|++|+|+|||.|||+|..|+|+
T Consensus       112 ssd~d~ftCrvCgK~F~lQRm-lnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~ka  182 (267)
T KOG3576|consen  112 SSDQDSFTCRVCGKKFGLQRM-LNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKA  182 (267)
T ss_pred             CCCCCeeeeehhhhhhhHHHH-HHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHH
Confidence            346788999999999987654 45999999999999999999999999999999999999999999999998

>KOG3576 consensus Ovo and related transcription factors [Transcription]

Probab=98.51  E-value=1.6e-08  Score=90.92  Aligned_cols=67  Identities=13%  Similarity=0.276  Sum_probs=56.4

Q ss_pred             cCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhh-hcc----------CCccccccccCcc
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQN-AHK----------QERAVAKRRQGVD  145 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr-~Ht----------gEKpy~C~~Cgk~  145 (286)
                      ...-|+-||+-|...=.++ +|+|+|||.+||+|..|+|+|.+..+|..|.+ +|.          ++|-|.|.+||..
T Consensus       144 kr~lct~cgkgfndtfdlk-rh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t  221 (267)
T KOG3576|consen  144 KRHLCTFCGKGFNDTFDLK-RHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYT  221 (267)
T ss_pred             HHHHHhhccCcccchhhhh-hhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCC
Confidence            3446788999998776554 99999999999999999999999999999965 564          3567889999986

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.46  E-value=5.2e-08  Score=101.27  Aligned_cols=81  Identities=22%  Similarity=0.224  Sum_probs=40.4

Q ss_pred             eeecCCCCcccCCCccchhhhhhccCCccccccccCcchhhhhhhccCCCccCc---CCCcc-CCCC---CCC-CccccC
Q 046965          108 VFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGNQHFSFY---SPYYS-RFSP---YYG-SFNRSL  179 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~~~~~a~~f~~~H~~~~---~py~s-~~~p---~~g-s~~r~l  179 (286)
                      |-+|-+|.|..+...+|+-|.|+|+|||||+|++||+++  ....-...||..+   .|+.. ..||   .|- -|....
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAF--tTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V  682 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAF--TTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAV  682 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchh--ccccchhhcccccccCccccccccCCchhhhcccccccc
Confidence            445555555555555555555555555555555555551  1111111233221   12211 3344   332 455677


Q ss_pred             CCCCCccCCCC
Q 046965          180 GVKMNSMIHKP  190 (286)
Q Consensus       180 gl~~Hs~iHkp  190 (286)
                      .++.|.+||.+
T Consensus       683 ~lpQhIriH~~  693 (958)
T KOG1074|consen  683 TLPQHIRIHLG  693 (958)
T ss_pred             cccceEEeecC
Confidence            78889999886

>PHA02768 hypothetical protein; Provisional

Probab=98.36  E-value=1.2e-07  Score=68.56  Aligned_cols=36  Identities=11%  Similarity=0.221  Sum_probs=33.8

Q ss_pred             eeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965          108 VFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      -|+|++||+.|...++|..||++|+  ++|+|..|++.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~   40 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRI   40 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccce
Confidence            4899999999999999999999999  79999999997

>KOG1074 consensus Transcriptional repressor SALM [Transcription]

Probab=98.35  E-value=1.4e-07  Score=98.03  Aligned_cols=67  Identities=15%  Similarity=0.243  Sum_probs=59.4

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQG  143 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cg  143 (286)
                      -.|-.-|.-||+-|.....++ .|||+|+++|||.|.+|++.|.....|+.||.+|.+..++..+.|.
T Consensus       876 vnn~h~C~vCgk~FsSSsALq-iH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~srrG~~  942 (958)
T KOG1074|consen  876 VNNAHVCNVCGKQFSSSAALE-IHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPSRRGPS  942 (958)
T ss_pred             ccchhhhccchhcccchHHHH-HhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCCCccCCCC
Confidence            556678999999999887665 9999999999999999999999999999999999999998888443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.98  E-value=1.3e-06  Score=53.78  Aligned_cols=23  Identities=22%  Similarity=0.691  Sum_probs=19.1

Q ss_pred             CCcccccCCCceeecCCCCcccC
Q 046965           97 TSSEKKSSEARVFSCNYCKREFS  119 (286)
Q Consensus        97 ~~H~rtHtgeKpf~C~~CgK~F~  119 (286)
                      ..|+++|++++||.|++|++.|.
T Consensus         3 ~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    3 RRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHhhhcCCCCCCCCCCCcCeeC
Confidence            36888888888888888888885

...

>PHA02768 hypothetical protein; Provisional

Probab=97.90  E-value=1.6e-06  Score=62.78  Aligned_cols=45  Identities=9%  Similarity=-0.025  Sum_probs=39.4

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchh
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGG  126 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~  126 (286)
                      -|.|..||+.|...+.+ +.|+++|+  ++|+|..|++.|...+.|..
T Consensus         5 ~y~C~~CGK~Fs~~~~L-~~H~r~H~--k~~kc~~C~k~f~~~s~l~~   49 (55)
T PHA02768          5 GYECPICGEIYIKRKSM-ITHLRKHN--TNLKLSNCKRISLRTGEYIE   49 (55)
T ss_pred             ccCcchhCCeeccHHHH-HHHHHhcC--CcccCCcccceecccceeEE
Confidence            36899999999998866 59999999  79999999999998877753

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=97.82  E-value=6.8e-06  Score=50.48  Aligned_cols=23  Identities=22%  Similarity=0.224  Sum_probs=21.7

Q ss_pred             cchhhhhhccCCccccccccCcc
Q 046965          123 ALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       123 aL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      +|..|+++|+++|||+|..|++.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~   23 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKS   23 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEE
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCe
Confidence            47899999999999999999997

...

>PHA00733 hypothetical protein

Probab=97.79  E-value=7e-06  Score=68.84  Aligned_cols=65  Identities=15%  Similarity=0.117  Sum_probs=50.3

Q ss_pred             cCccccCCccchhhccCCCC-----CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           78 NRMSMMNNNHCHEENNGHPT-----SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~-----~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ....|..|.+.+.....+..     .|+.. .+++||.|+.|++.|.....|..|+++|  +.+|.|..|++.
T Consensus        39 ~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~-~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~  108 (128)
T PHA00733         39 KRLIRAVVKTLIYNPQLLDESSYLYKLLTS-KAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKE  108 (128)
T ss_pred             hhHHHHHHhhhccChhhhcchHHHHhhccc-CCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCc
Confidence            34467778877776544332     34344 4588999999999999999999999987  467999999998

>PHA00616 hypothetical protein

Probab=97.77  E-value=4.8e-06  Score=57.67  Aligned_cols=34  Identities=12%  Similarity=0.280  Sum_probs=31.9

Q ss_pred             eeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965          108 VFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      ||+|..||+.|...+.|..|++.|++++++.|..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            6899999999999999999999999999998863

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.69  E-value=7e-06  Score=83.70  Aligned_cols=61  Identities=13%  Similarity=0.143  Sum_probs=35.3

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ...|..|+++|...  .+..|+++|+  ++|.|+ |++.| ....|..|++.|..+|++.|+.|++.
T Consensus       453 H~~C~~Cgk~f~~s--~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~  513 (567)
T PLN03086        453 HVHCEKCGQAFQQG--EMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDM  513 (567)
T ss_pred             CccCCCCCCccchH--HHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCc
Confidence            34566666666422  2245666553  566666 66543 44566666666666666666666665

>PLN03086 PRLI-interacting factor K; Provisional

Probab=97.20  E-value=0.00014  Score=74.43  Aligned_cols=64  Identities=11%  Similarity=0.242  Sum_probs=52.4

Q ss_pred             cCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCC----------CccchhhhhhccCCccccccccCcc
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFST----------SQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~s----------ssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      -.+.|. ||+.+. + ..+..|+++|..++++.|.+|++.|..          ...|..|..++ +.+++.|..||+.
T Consensus       477 kpv~Cp-Cg~~~~-R-~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~  550 (567)
T PLN03086        477 EPLQCP-CGVVLE-K-EQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRS  550 (567)
T ss_pred             CCccCC-CCCCcc-h-hHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCe
Confidence            345788 997553 3 455689999999999999999999952          24799999986 8999999999997

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.07  E-value=0.00016  Score=42.39  Aligned_cols=23  Identities=30%  Similarity=0.749  Sum_probs=21.6

Q ss_pred             eecCCCCcccCCCccchhhhhhc
Q 046965          109 FSCNYCKREFSTSQALGGHQNAH  131 (286)
Q Consensus       109 f~C~~CgK~F~sssaL~~Hqr~H  131 (286)
                      |.|+.|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            78999999999999999999875

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=97.04  E-value=4.4e-05  Score=73.71  Aligned_cols=67  Identities=12%  Similarity=0.161  Sum_probs=53.3

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhh-ccCCccccccccCcc
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNA-HKQERAVAKRRQGVD  145 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~-HtgEKpy~C~~Cgk~  145 (286)
                      ..|.|.|.+|.|-|+.+..+ ..|++.|..  .|+|+.|.......+.|..|++. |...|||+|..|.+.
T Consensus       234 ~~n~fqC~~C~KrFaTeklL-~~Hv~rHvn--~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~  301 (467)
T KOG3608|consen  234 NTNSFQCAQCFKRFATEKLL-KSHVVRHVN--CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTR  301 (467)
T ss_pred             cCCchHHHHHHHHHhHHHHH-HHHHHHhhh--cccccccccCCCChHHHHHHHHhhhccCCCccccchhhh
Confidence            77889999999999877644 377777764  58888888888888888888774 777888888888775

>PHA00732 hypothetical protein

Probab=97.01  E-value=0.00027  Score=54.71  Aligned_cols=35  Identities=23%  Similarity=0.246  Sum_probs=30.6

Q ss_pred             eeecCCCCcccCCCccchhhhhh-ccCCccccccccCcc
Q 046965          108 VFSCNYCKREFSTSQALGGHQNA-HKQERAVAKRRQGVD  145 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr~-HtgEKpy~C~~Cgk~  145 (286)
                      ||.|..|++.|.+...|..|++. |+   ++.|..|++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKs   36 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKS   36 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCE
Confidence            68899999999999999999984 65   3689999998

>PHA00733 hypothetical protein

Probab=96.97  E-value=0.0002  Score=60.09  Aligned_cols=52  Identities=10%  Similarity=0.062  Sum_probs=43.2

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhc
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAH  131 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~H  131 (286)
                      ...+.|..||+.|.....+. .|++.|  +.+|.|..|++.|.....|..|+...
T Consensus        71 ~kPy~C~~Cgk~Fss~s~L~-~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~  122 (128)
T PHA00733         71 VSPYVCPLCLMPFSSSVSLK-QHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKK  122 (128)
T ss_pred             CCCccCCCCCCcCCCHHHHH-HHHhcC--CcCccCCCCCCccCCHHHHHHHHHHh
Confidence            34679999999999877654 777776  45799999999999999999998754

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=96.46  E-value=0.00087  Score=40.73  Aligned_cols=25  Identities=36%  Similarity=0.732  Sum_probs=23.3

Q ss_pred             eeecCCCCcccCCCccchhhhhhcc
Q 046965          108 VFSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      ||+|..|++.|....+|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            6899999999999999999998874

>KOG3608 consensus Zn finger proteins [General function prediction only]

Probab=96.34  E-value=0.00073  Score=65.47  Aligned_cols=110  Identities=13%  Similarity=0.100  Sum_probs=72.9

Q ss_pred             CccCccccCCccchhhccCCCCCcccc-cCCCceeecCCCCcccCCCccchhhhhhccCCccccccc--cCcchhhh---
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKK-SSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR--QGVDQDVG---  149 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rt-HtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~--Cgk~~~~~---  149 (286)
                      -.|+++|+-|+-.-...+.+ .+|+|. |...|||+|+.|.+.|.....|..|..+|. +-.|.|..  |-.++..-   
T Consensus       260 Hvn~ykCplCdmtc~~~ssL-~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~  337 (467)
T KOG3608|consen  260 HVNCYKCPLCDMTCSSASSL-TTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQM  337 (467)
T ss_pred             hhhcccccccccCCCChHHH-HHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHH
Confidence            67899999887544443332 366664 888999999999999999999999999998 77899987  77652111   


Q ss_pred             hhhccCCCccCc-CCCccCCCCCCCC-ccccCCCCCCccCCCC
Q 046965          150 AAAFGNQHFSFY-SPYYSRFSPYYGS-FNRSLGVKMNSMIHKP  190 (286)
Q Consensus       150 a~~f~~~H~~~~-~py~s~~~p~~gs-~~r~lgl~~Hs~iHkp  190 (286)
                      +..|.-.|-+.. .+|.   |..|.. |.+-..|.+|-|-...
T Consensus       338 ~~H~~evhEg~np~~Y~---CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  338 RRHFLEVHEGNNPILYA---CHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             HHHHHHhccCCCCCcee---eecchhhhccchhHHHHHHHhhc
Confidence            111211221211 2444   666664 4445557788665544

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.18  E-value=0.0018  Score=37.34  Aligned_cols=23  Identities=30%  Similarity=0.766  Sum_probs=19.6

Q ss_pred             eecCCCCcccCCCccchhhhhhc
Q 046965          109 FSCNYCKREFSTSQALGGHQNAH  131 (286)
Q Consensus       109 f~C~~CgK~F~sssaL~~Hqr~H  131 (286)
                      |.|++|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            78999999999999999999876

...

>PHA00732 hypothetical protein

Probab=96.13  E-value=0.0014  Score=50.80  Aligned_cols=45  Identities=9%  Similarity=0.163  Sum_probs=35.2

Q ss_pred             ccccCCccchhhccCCCCCcccc-cCCCceeecCCCCcccCCCccchhhhhhc
Q 046965           80 MSMMNNNHCHEENNGHPTSSEKK-SSEARVFSCNYCKREFSTSQALGGHQNAH  131 (286)
Q Consensus        80 ~tc~~~g~S~~~~~~~~~~H~rt-HtgeKpf~C~~CgK~F~sssaL~~Hqr~H  131 (286)
                      +.|..||+.|.....+. .|++. |++   +.|+.|++.|.   .|..|.+.+
T Consensus         2 y~C~~Cgk~F~s~s~Lk-~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          2 FKCPICGFTTVTLFALK-QHARRNHTL---TKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             ccCCCCCCccCCHHHHH-HHhhcccCC---CccCCCCCEeC---Chhhhhccc
Confidence            67999999999877654 78874 653   68999999997   477787543

>PRK04860 hypothetical protein; Provisional

Probab=95.78  E-value=0.0052  Score=53.58  Aligned_cols=35  Identities=20%  Similarity=0.395  Sum_probs=31.5

Q ss_pred             ceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      -+|.|. |++   ....+.+|.++|+++++|.|..|+..
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~  152 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGET  152 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCce
Confidence            479998 998   66778999999999999999999987

>smart00355 ZnF_C2H2 zinc finger

Probab=95.57  E-value=0.0048  Score=35.77  Aligned_cols=24  Identities=29%  Similarity=0.675  Sum_probs=22.0

Q ss_pred             eecCCCCcccCCCccchhhhhhcc
Q 046965          109 FSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       109 f~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            689999999999999999998775

>PHA00616 hypothetical protein

Probab=95.40  E-value=0.0015  Score=45.39  Aligned_cols=34  Identities=3%  Similarity=-0.002  Sum_probs=30.2

Q ss_pred             ccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           80 MSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        80 ~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      +.|..||+.|..++... .|++.|+++++|.|++-
T Consensus         2 YqC~~CG~~F~~~s~l~-~H~r~~hg~~~~~~~~~   35 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVI-EHLLSVHKQNKLTLEYF   35 (44)
T ss_pred             CccchhhHHHhhHHHHH-HHHHHhcCCCccceeEE
Confidence            67999999999998655 89999999999999864

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=94.15  E-value=0.024  Score=40.69  Aligned_cols=33  Identities=15%  Similarity=0.311  Sum_probs=24.0

Q ss_pred             CCCceeecCCCCcccCCCccchhhhhhccCCcc
Q 046965          104 SEARVFSCNYCKREFSTSQALGGHQNAHKQERA  136 (286)
Q Consensus       104 tgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKp  136 (286)
                      ..+.|-.|++|+..+.+..+|.+|+.++.+.||
T Consensus        20 ~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            357899999999999999999999988877765

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=93.94  E-value=0.031  Score=53.79  Aligned_cols=41  Identities=12%  Similarity=0.379  Sum_probs=32.1

Q ss_pred             CCceeecCC--CCcccCCCccchhhhhh-cc------------------CCccccccccCcc
Q 046965          105 EARVFSCNY--CKREFSTSQALGGHQNA-HK------------------QERAVAKRRQGVD  145 (286)
Q Consensus       105 geKpf~C~~--CgK~F~sssaL~~Hqr~-Ht------------------gEKpy~C~~Cgk~  145 (286)
                      ++|||+|++  |.|++.....|+-|+.- |.                  ..|||.|..|+|.
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KR  407 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKR  407 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchh
Confidence            459999997  99999999999999753 31                  2377777777776

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=93.90  E-value=0.014  Score=57.77  Aligned_cols=23  Identities=39%  Similarity=0.767  Sum_probs=12.2

Q ss_pred             eecCCCCcccCCCccchhhhhhc
Q 046965          109 FSCNYCKREFSTSQALGGHQNAH  131 (286)
Q Consensus       109 f~C~~CgK~F~sssaL~~Hqr~H  131 (286)
                      |.|.+|+|+|.....|+.|+.+|
T Consensus       357 ~~C~~C~KkFrRqAYLrKHqlth  379 (500)
T KOG3993|consen  357 FSCHTCGKKFRRQAYLRKHQLTH  379 (500)
T ss_pred             eecHHhhhhhHHHHHHHHhHHhh
Confidence            55555555555555555555444

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=93.14  E-value=0.025  Score=33.52  Aligned_cols=23  Identities=30%  Similarity=0.788  Sum_probs=21.0

Q ss_pred             eecCCCCcccCCCccchhhhhhc
Q 046965          109 FSCNYCKREFSTSQALGGHQNAH  131 (286)
Q Consensus       109 f~C~~CgK~F~sssaL~~Hqr~H  131 (286)
                      |.|..|++.|.+...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            78999999999999999998764

>KOG3993 consensus Transcription factor (contains Zn finger) [Transcription]

Probab=92.23  E-value=0.047  Score=54.19  Aligned_cols=26  Identities=31%  Similarity=0.623  Sum_probs=23.7

Q ss_pred             ceeecCCCCcccCCCccchhhhhhcc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      .-|+|++|+|.|....+|..|.|-|+
T Consensus       294 vEYrCPEC~KVFsCPANLASHRRWHK  319 (500)
T KOG3993|consen  294 VEYRCPECDKVFSCPANLASHRRWHK  319 (500)
T ss_pred             eeecCCcccccccCchhhhhhhcccC
Confidence            35999999999999999999999986

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.95  E-value=0.14  Score=47.62  Aligned_cols=62  Identities=19%  Similarity=0.276  Sum_probs=43.1

Q ss_pred             CccccCCccchhhccCCCCCccc--ccCCC--ceeecC--CCCcccCCCccchhhhhhccCCccccccc
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEK--KSSEA--RVFSCN--YCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~r--tHtge--Kpf~C~--~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .+.|..|...+.....+. .|.+  .|+++  +++.|+  .|++.|.....+..|...|+..++++|..
T Consensus       289 ~~~~~~~~~~~s~~~~l~-~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (467)
T COG5048         289 PIKSKQCNISFSRSSPLT-RHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKL  356 (467)
T ss_pred             CCCCccccCCcccccccc-ccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccccc
Confidence            456666766666665443 6667  67777  777777  67777777777777777777776666653

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=91.37  E-value=0.065  Score=32.66  Aligned_cols=22  Identities=32%  Similarity=0.739  Sum_probs=20.3

Q ss_pred             eecCCCCcccCCCccchhhhhh
Q 046965          109 FSCNYCKREFSTSQALGGHQNA  130 (286)
Q Consensus       109 f~C~~CgK~F~sssaL~~Hqr~  130 (286)
                      |.|..|++.|.+...|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7899999999999999999875

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=91.15  E-value=0.049  Score=47.51  Aligned_cols=39  Identities=8%  Similarity=0.106  Sum_probs=30.6

Q ss_pred             cCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCC
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTS  121 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~ss  121 (286)
                      -.+.|. |+..    .....+|.++|+++++|.|..|++.|...
T Consensus       118 ~~Y~C~-C~~~----~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQEH----QLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCCe----eCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            457887 8872    23345888999999999999999988654

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=90.50  E-value=0.11  Score=39.59  Aligned_cols=24  Identities=33%  Similarity=0.840  Sum_probs=21.0

Q ss_pred             eeecCCCCcccCCCccchhhhhhc
Q 046965          108 VFSCNYCKREFSTSQALGGHQNAH  131 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr~H  131 (286)
                      .+.|..|++.|.+..+|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            689999999999999999999864

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=89.75  E-value=0.07  Score=37.88  Aligned_cols=37  Identities=27%  Similarity=0.556  Sum_probs=24.9

Q ss_pred             eeecCCCCcccCCCccchhhhh-hccCC-ccccccccCcc
Q 046965          108 VFSCNYCKREFSTSQALGGHQN-AHKQE-RAVAKRRQGVD  145 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr-~HtgE-Kpy~C~~Cgk~  145 (286)
                      .|.|++|++.| +...|..|.. .|..+ +.+.|..|...
T Consensus         2 ~f~CP~C~~~~-~~~~L~~H~~~~H~~~~~~v~CPiC~~~   40 (54)
T PF05605_consen    2 SFTCPYCGKGF-SESSLVEHCEDEHRSESKNVVCPICSSR   40 (54)
T ss_pred             CcCCCCCCCcc-CHHHHHHHHHhHCcCCCCCccCCCchhh
Confidence            37788888844 4567888854 46554 46788888765

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=89.34  E-value=0.2  Score=35.47  Aligned_cols=51  Identities=12%  Similarity=0.214  Sum_probs=35.1

Q ss_pred             cCccccCCccchhhccCCCCCcc-cccCCC-ceeecCCCCcccCCCccchhhhhhcc
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSE-KKSSEA-RVFSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~-rtHtge-Kpf~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      +-|+|.-|++.+....  +..|. ..|..+ +.+.|++|...+.  ..|..|++.+.
T Consensus         1 ~~f~CP~C~~~~~~~~--L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    1 DSFTCPYCGKGFSESS--LVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CCcCCCCCCCccCHHH--HHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            3578999999655433  33553 345543 5799999998765  38899987653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=87.76  E-value=0.19  Score=29.56  Aligned_cols=23  Identities=26%  Similarity=0.533  Sum_probs=17.7

Q ss_pred             eecCCCCcccCCCccchhhhhhcc
Q 046965          109 FSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       109 f~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      |+|+.|..... ...|..|++.|.
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            78999998887 889999988753

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=84.04  E-value=0.28  Score=45.73  Aligned_cols=47  Identities=19%  Similarity=0.333  Sum_probs=38.8

Q ss_pred             cccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhh-hhhcc
Q 046965           81 SMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGH-QNAHK  132 (286)
Q Consensus        81 tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~H-qr~Ht  132 (286)
                      .|+-|.+-|....++.+     |...|-|+|.+|.|++.+--.|..| |.+|+
T Consensus        12 wcwycnrefddekiliq-----hqkakhfkchichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQ-----HQKAKHFKCHICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             eeeecccccchhhhhhh-----hhhhccceeeeehhhhccCCCceeehhhhhh
Confidence            79999999999888763     4456779999999998888888888 56775

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=83.85  E-value=0.41  Score=29.04  Aligned_cols=21  Identities=29%  Similarity=0.710  Sum_probs=16.9

Q ss_pred             eecCCCCcccCCCccchhhhhh
Q 046965          109 FSCNYCKREFSTSQALGGHQNA  130 (286)
Q Consensus       109 f~C~~CgK~F~sssaL~~Hqr~  130 (286)
                      ..|+.|++.| ....|..|+++
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4799999999 56788888764

>smart00451 ZnF_U1 U1-like zinc finger

Probab=83.07  E-value=0.48  Score=29.94  Aligned_cols=23  Identities=22%  Similarity=0.572  Sum_probs=20.3

Q ss_pred             eeecCCCCcccCCCccchhhhhh
Q 046965          108 VFSCNYCKREFSTSQALGGHQNA  130 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr~  130 (286)
                      +|.|..|++.|....++..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            58899999999999999989764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893 consensus Zn finger protein [General function prediction only]

Probab=80.91  E-value=0.57  Score=43.77  Aligned_cols=34  Identities=29%  Similarity=0.439  Sum_probs=29.5

Q ss_pred             ceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      || -|-+|.+.|.....|.+||+.    |.|+|..|.|.
T Consensus        10 kp-wcwycnrefddekiliqhqka----khfkchichkk   43 (341)
T KOG2893|consen   10 KP-WCWYCNREFDDEKILIQHQKA----KHFKCHICHKK   43 (341)
T ss_pred             Cc-eeeecccccchhhhhhhhhhh----ccceeeeehhh
Confidence            44 599999999999999999875    56999999886

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	286
2l1o_A	39	Zinc To Cadmium Replacement In The A. Thaliana Supe		6e-04

>pdb|2L1O|A Chain A, Zinc To Cadmium Replacement In The A. Thaliana Superman Cys2his2 Zinc Finger Induces Structural Rearrangements Of Typical Dna Base Determinant Positions Length = 39

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 15/25 (60%), Positives = 21/25 (84%)
Query: 107 RVFSCNYCKREFSTSQALGGHQNAH 131
           R ++C++CKREF ++QALGGH N H
Sbjct: 5   RSYTCSFCKREFRSAQALGGHMNVH 29

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	286
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	7e-17

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A Length = 39

 Score = 71.7 bits (176), Expect = 7e-17
 Identities = 17/33 (51%), Positives = 27/33 (81%)

Query: 107 RVFSCNYCKREFSTSQALGGHQNAHKQERAVAK 139
           R ++C++CKREF ++QALGGH N H+++RA  +
Sbjct: 5   RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 37

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	286
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.38
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.36
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.34
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.34
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.33
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.32
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.31
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.31
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.31
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.3
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.3
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.3
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.3
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.3
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.3
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.3
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.3
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.29
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.29
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.29
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.29
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.29
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.29
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.29
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.29
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.29
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.28
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.28
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.28
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.28
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.28
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.27
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.27
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.27
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.26
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.26
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.25
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.24
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.23
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.19
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.19
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.18
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.18
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.18
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.18
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.17
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.17
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.16
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.16
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.16
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.16
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.15
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.15
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.15
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.15
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.15
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.15
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.15
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.14
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.13
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.12
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.12
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.11
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.1
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.1
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.08
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.03
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.02
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.02
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.02
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.02
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.01
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.01
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.01
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.0
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.0
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.0
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.0
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	98.99
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.99
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	98.99
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.99
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	98.98
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.98
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	98.98
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.97
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	98.97
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.96
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	98.95
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	98.95
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	98.92
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.91
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	98.91
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.91
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	98.9
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	98.88
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.86
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.85
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.85
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.83
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.83
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.83
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	98.82
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.82
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	98.82
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.81
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	98.8
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	98.79
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.79
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	98.76
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	98.75
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	98.75
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.71
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	98.71
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	98.69
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.68
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.67
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	98.65
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.64
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	98.61
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.6
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	98.59
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.59
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.58
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.54
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.54
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.53
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	98.53
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	98.52
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	98.48
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.47
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	98.45
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	98.44
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.42
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.41
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.41
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	98.36
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.33
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.32
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.31
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.23
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.2
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.2
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.46
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.15
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.14
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.14
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.12
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.41
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.11
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.11
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.06
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.04
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.03
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.03
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.02
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.99
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.95
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	97.91
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.1
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.8
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.79
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.78
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	97.75
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	97.75
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.74
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.74
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.74
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.73
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.73
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.72
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.72
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.72
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	97.72
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.71
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	97.71
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	97.71
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.71
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.7
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.7
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.69
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	97.69
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.67
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.67
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	97.67
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	97.67
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.66
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.66
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.66
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.66
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.64
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.63
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.63
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.62
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.62
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	97.62
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.62
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.62
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.61
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.61
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.61
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.61
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.61
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.6
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.6
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.6
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.59
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.58
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.58
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.58
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.58
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.55
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	97.53
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	97.51
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.51
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.41
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.35
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.33
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.32
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.32
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.31
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.3
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.29
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.28
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	97.26
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.26
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.26
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	97.26
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	97.25
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	97.25
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.25
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	97.23
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.23
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.2
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	97.2
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.19
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	97.19
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	97.18
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.18
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	97.17
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.16
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	97.15
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.14
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	97.13
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.11
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	97.11
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.11
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	97.1
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	97.08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	97.06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	97.05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	97.05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	97.05
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	97.03
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.02
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	97.01
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	96.97
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	96.95
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	96.92
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	96.88
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.86
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	96.85
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	96.71
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	96.63
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	96.42
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	96.37
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	96.09
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	95.86
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	95.84
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.76
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	95.31
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	95.22
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	94.21
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	93.93
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	94.66
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.6
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	94.14
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	93.91
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	93.87
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	93.78
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	93.76
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.65
1ard_A	29	Yeast transcription factor ADR1; transcription reg	93.61
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.34
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	93.33
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	93.29
1paa_A	30	Yeast transcription factor ADR1; transcription reg	93.17
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	92.86
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	92.85
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	92.77
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	92.72
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	91.89
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	92.62
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	92.62
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	92.04
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	91.84
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	91.33
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	90.92
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	88.84
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	85.8
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	84.87
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	84.54

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.38  E-value=2.5e-14  Score=103.22  Aligned_cols=40  Identities=28%  Similarity=0.510  Sum_probs=28.7

Q ss_pred             CceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965          106 ARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       106 eKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ||||+|.+|++.|.....|..|+++|+++|||+|.+||+.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~   41 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKC   41 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCE
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCC
Confidence            5677777777777777777777777777777777777776

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.36  E-value=2.6e-14  Score=103.13  Aligned_cols=56  Identities=14%  Similarity=0.217  Sum_probs=51.8

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCc
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      .|.|.+||++|.....+. .|+++|++++||.|.+|++.|.....|..|+++|++|+
T Consensus         4 py~C~~C~k~F~~~~~L~-~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            4 PFFCNFCGKTYRDASGLS-RHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CEECTTTCCEESSHHHHH-HHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CccCCCCCCEeCCHHHHH-HHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            578999999999988654 89999999999999999999999999999999999975

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.34  E-value=8.7e-14  Score=106.95  Aligned_cols=69  Identities=14%  Similarity=0.307  Sum_probs=62.6

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ....|.|..|++.|.....+ ..|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|..|++.
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   82 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNL-LIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKG   82 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHH-HHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCC
T ss_pred             CCcCeECCCCCCccCCHHHH-HHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCc
Confidence            44568999999999887755 4899999999999999999999999999999999999999999999997

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.34  E-value=3.7e-14  Score=116.69  Aligned_cols=69  Identities=14%  Similarity=0.110  Sum_probs=61.3

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcch
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQ  146 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~~  146 (286)
                      ...|.|..||++|.....+. .|+++|++++||.|++|++.|.....|..|+++|++++||.|.+|++.+
T Consensus        20 ek~y~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F   88 (133)
T 2lt7_A           20 RVYYICIVCKRSYVCLTSLR-RHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSF   88 (133)
T ss_dssp             EEEEEETTTCCEESCHHHHH-HHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEE
T ss_pred             CcCeECCCCCCCcCCHHHHH-HHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCc
Confidence            34688999999999887654 8999999999999999999999999999999999999999999999983

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.33  E-value=1.2e-13  Score=104.15  Aligned_cols=68  Identities=13%  Similarity=0.217  Sum_probs=62.5

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ...|.|..|++.|.....+ ..|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|..|++.
T Consensus         6 ~~~~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   73 (96)
T 2dmd_A            6 SGPHKCEVCGKCFSRKDKL-KTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYA   73 (96)
T ss_dssp             CCCCCBTTTTBCCCCHHHH-HHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCE
T ss_pred             CcCeECCCCCCccCCHHHH-HHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCc
Confidence            3568899999999887754 4899999999999999999999999999999999999999999999998

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.32  E-value=1.5e-14  Score=119.12  Aligned_cols=92  Identities=18%  Similarity=0.111  Sum_probs=72.7

Q ss_pred             CCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcchhhhhhhcc--CCCccCcCCCccCCCCCC
Q 046965           95 HPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFG--NQHFSFYSPYYSRFSPYY  172 (286)
Q Consensus        95 ~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~~~~~a~~f~--~~H~~~~~py~s~~~p~~  172 (286)
                      +...|+++|+|+++|+|++|++.|.....|..|+++|++++||+|.+|++.+......-.  ..|.+.. ||.   |+.|
T Consensus         9 h~~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k-~~~---C~~C   84 (133)
T 2lt7_A            9 HDDHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGER-RYQ---CLAC   84 (133)
T ss_dssp             CSSEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCC-CEE---ESSS
T ss_pred             HHhhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCc-ccc---CCCC
Confidence            455778899999999999999999999999999999999999999999998422221111  1233332 565   8889


Q ss_pred             C-CccccCCCCCCccCCCC
Q 046965          173 G-SFNRSLGVKMNSMIHKP  190 (286)
Q Consensus       173 g-s~~r~lgl~~Hs~iHkp  190 (286)
                      | .|.+...|+.|.++|.+
T Consensus        85 ~k~F~~~~~L~~H~~~hh~  103 (133)
T 2lt7_A           85 GKSFINYQFMSSHIKSVHS  103 (133)
T ss_dssp             CCEESSHHHHHHHHHHHTC
T ss_pred             CCCcCCHHHHHHHhHHhcC
Confidence            8 67778889999988864

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.31  E-value=8.3e-13  Score=87.56  Aligned_cols=45  Identities=27%  Similarity=0.448  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.31  E-value=3.8e-14  Score=111.70  Aligned_cols=107  Identities=20%  Similarity=0.286  Sum_probs=81.3

Q ss_pred             cCcccc--CCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc--cCcchhhhhhhc
Q 046965           78 NRMSMM--NNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR--QGVDQDVGAAAF  153 (286)
Q Consensus        78 n~~tc~--~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~--Cgk~~~~~a~~f  153 (286)
                      ..|.|.  .|++.|.....+. .|+++| ++++|.|..|++.|.....|..|+++|+++++|.|..  |++.+......-
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~-~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMR-KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHH-HHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHH-HHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            356788  8999998877554 889999 8899999999999999999999999999999999985  999842222111


Q ss_pred             cC--CCccCcCCCccCCCCC--CC-CccccCCCCCCccCCCC
Q 046965          154 GN--QHFSFYSPYYSRFSPY--YG-SFNRSLGVKMNSMIHKP  190 (286)
Q Consensus       154 ~~--~H~~~~~py~s~~~p~--~g-s~~r~lgl~~Hs~iHkp  190 (286)
                      .|  .|.+. .||.   |++  || .|.+...|..|.++|.+
T Consensus        82 ~H~~~h~~~-~~~~---C~~~~C~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           82 THVRIHTGD-RPYV---CPFDGCNKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             HHHHHHHCC-CCCC---CCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred             HHHHHhCCC-CceE---CCCCCCCCccCCHHHHHHHHHHHcc
Confidence            11  23222 2554   764  88 67778889999999976

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.31  E-value=1e-13  Score=113.51  Aligned_cols=115  Identities=13%  Similarity=0.097  Sum_probs=84.6

Q ss_pred             CccccCCccchhhccCCCCCcccc-cCCCce--------eecCCCCcccCCCccchhhhhhccCCccccccc--cCcchh
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKK-SSEARV--------FSCNYCKREFSTSQALGGHQNAHKQERAVAKRR--QGVDQD  147 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rt-HtgeKp--------f~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~--Cgk~~~  147 (286)
                      .+.|..|++.|.....+. .|+++ |.++++        |.|..|++.|.....|..|+++|+++++|.|..  |++.+.
T Consensus        25 ~~~C~~C~~~f~~~~~L~-~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  103 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELV-THVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA  103 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHH-HHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEES
T ss_pred             ccccccCCcccCCHHHHH-HHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccC
Confidence            468999999998877554 78887 777665        889999999999999999999999999999998  999842


Q ss_pred             hhhh--hccCCCccCcCCCccCCCCC--CC-CccccCCCCCCccCCCCCCCCCCCCCCCC
Q 046965          148 VGAA--AFGNQHFSFYSPYYSRFSPY--YG-SFNRSLGVKMNSMIHKPVAYGSHPWPSAN  202 (286)
Q Consensus       148 ~~a~--~f~~~H~~~~~py~s~~~p~--~g-s~~r~lgl~~Hs~iHkp~~~~~~p~~~~g  202 (286)
                      ....  .....|.+. .||.   |++  || .|.+...|+.|.++|.+..    ||.+.|
T Consensus       104 ~~~~L~~H~~~h~~~-~~~~---C~~~~C~k~f~~~~~L~~H~~~H~~~k----~~~c~g  155 (155)
T 2rpc_A          104 RSENLKIHKRTHTGE-KPFK---CEFEGCDRRFANSSDRKKHMHVHTSDK----SGPSSG  155 (155)
T ss_dssp             CHHHHHHHHTTTCSS-CSBC---CSSTTCCCCBSSHHHHHHSSTTTTSCC----CSCSCC
T ss_pred             CHHHHHHHHHhhCCC-CCcc---CCCCCCCCccCCHHHHHHHHHHhcCCC----CCCCCC
Confidence            2221  111233332 2554   776  87 6777777999999998732    555443

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=7.6e-13  Score=87.57  Aligned_cols=45  Identities=24%  Similarity=0.476  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=8.1e-13  Score=87.44  Aligned_cols=45  Identities=22%  Similarity=0.468  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=9.8e-13  Score=87.04  Aligned_cols=45  Identities=22%  Similarity=0.439  Sum_probs=43.7

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=7.3e-13  Score=87.48  Aligned_cols=45  Identities=29%  Similarity=0.416  Sum_probs=43.7

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=8.5e-13  Score=87.51  Aligned_cols=45  Identities=22%  Similarity=0.400  Sum_probs=43.5

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.30  E-value=8.5e-13  Score=87.35  Aligned_cols=45  Identities=27%  Similarity=0.409  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            688999999999999999999999999999999999999999987

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.30  E-value=1.8e-14  Score=105.31  Aligned_cols=65  Identities=15%  Similarity=0.290  Sum_probs=60.8

Q ss_pred             ccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           80 MSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        80 ~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      |.|..|++.|.....+. .|+++|+++++|.|..|++.|.....|..|+++|+++++|.|..|++.
T Consensus         2 ~~C~~C~~~f~~~~~l~-~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   66 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLS-THLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKA   66 (82)
T ss_dssp             EECSSSCCEESSHHHHH-HHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCE
T ss_pred             ccCCCCcccccCchhHH-HHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchh
Confidence            67999999998877554 899999999999999999999999999999999999999999999998

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=9.3e-13  Score=87.15  Aligned_cols=45  Identities=20%  Similarity=0.386  Sum_probs=43.5

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=9e-13  Score=87.39  Aligned_cols=45  Identities=24%  Similarity=0.473  Sum_probs=43.5

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=8.5e-13  Score=87.17  Aligned_cols=45  Identities=22%  Similarity=0.469  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.30  E-value=3.6e-14  Score=111.15  Aligned_cols=109  Identities=11%  Similarity=0.118  Sum_probs=83.7

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhh---ccCCccccccccCcchhhhhhhc
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNA---HKQERAVAKRRQGVDQDVGAAAF  153 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~---HtgEKpy~C~~Cgk~~~~~a~~f  153 (286)
                      ...+.|..|++.|.....+. .|+++|+++++|.|.+|++.|.....|..|++.   |.++++|.|..|++.+.......
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~-~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLK-VHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHH-HHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCcCCCHHHHH-HHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            35678999999998877554 899999999999999999999999999999985   68899999999999843222111


Q ss_pred             cC--CCccCcCCCccCCCCCCC-CccccCCCCCCcc-CCCC
Q 046965          154 GN--QHFSFYSPYYSRFSPYYG-SFNRSLGVKMNSM-IHKP  190 (286)
Q Consensus       154 ~~--~H~~~~~py~s~~~p~~g-s~~r~lgl~~Hs~-iHkp  190 (286)
                      .|  .|.+. .||.   |+.|+ .|.+...|+.|.+ +|..
T Consensus        84 ~H~~~h~~~-~~~~---C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           84 LHMVSHTGE-MPYK---CSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHHHSSS-CSEE---CSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HHHHHcCCC-CCcc---CCCccchhCCHHHHHHHHHHHCCC
Confidence            21  23222 2555   88898 6667777899976 6766

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.30  E-value=9.4e-13  Score=86.95  Aligned_cols=45  Identities=22%  Similarity=0.400  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.30  E-value=8.8e-13  Score=87.27  Aligned_cols=45  Identities=27%  Similarity=0.488  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=5.3e-13  Score=97.59  Aligned_cols=63  Identities=13%  Similarity=0.275  Sum_probs=56.4

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccc
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAK  139 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C  139 (286)
                      +...|.|..|++.|.....+. .|+++|+++++|.|.+|++.|.....|..|+++|++++||+|
T Consensus        15 ~~~~~~C~~C~~~f~~~~~l~-~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           15 ERRRYKCDECGKSFSHSSDLS-KHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSCSSBCSSSCCBCSCHHHHH-HHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCEECCCCCcccCCHHHHH-HHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            456789999999998877554 899999999999999999999999999999999999999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.29  E-value=9.1e-13  Score=87.35  Aligned_cols=45  Identities=24%  Similarity=0.449  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1e-12  Score=86.73  Aligned_cols=45  Identities=29%  Similarity=0.522  Sum_probs=43.7

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9.6e-13  Score=87.07  Aligned_cols=45  Identities=22%  Similarity=0.460  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.5e-13  Score=87.34  Aligned_cols=45  Identities=24%  Similarity=0.453  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.2e-12  Score=86.48  Aligned_cols=45  Identities=20%  Similarity=0.328  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.8e-13  Score=87.28  Aligned_cols=45  Identities=24%  Similarity=0.442  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9.2e-13  Score=87.18  Aligned_cols=45  Identities=20%  Similarity=0.444  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1e-12  Score=86.99  Aligned_cols=45  Identities=20%  Similarity=0.410  Sum_probs=43.5

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9e-13  Score=87.22  Aligned_cols=45  Identities=22%  Similarity=0.421  Sum_probs=43.5

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.8e-13  Score=87.09  Aligned_cols=45  Identities=22%  Similarity=0.448  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.29  E-value=1.1e-12  Score=86.63  Aligned_cols=45  Identities=22%  Similarity=0.420  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=1.1e-12  Score=102.40  Aligned_cols=93  Identities=15%  Similarity=0.099  Sum_probs=66.8

Q ss_pred             CCCCcccccCCCceeecCCCCcccCCCccchhhhhh--ccCCcccc-ccccCcchhhhhhhccCCCccCc---CCCccCC
Q 046965           95 HPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNA--HKQERAVA-KRRQGVDQDVGAAAFGNQHFSFY---SPYYSRF  168 (286)
Q Consensus        95 ~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~--HtgEKpy~-C~~Cgk~~~~~a~~f~~~H~~~~---~py~s~~  168 (286)
                      .+..|+++|++++||.|.+|++.|.....|..|+++  |.+++++. |..|++.+.+........|+..+   .||.   
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~---   82 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLK---   82 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCB---
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceE---
Confidence            455888999999999999999999999999999998  77777654 99999873112111122243322   2444   


Q ss_pred             CCCCC-CccccCCCCCCccCCCC
Q 046965          169 SPYYG-SFNRSLGVKMNSMIHKP  190 (286)
Q Consensus       169 ~p~~g-s~~r~lgl~~Hs~iHkp  190 (286)
                      |+.|| .|.+...|+.|.++|.+
T Consensus        83 C~~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           83 CMYCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             CSSSCCBCSSHHHHHHHHHHTTT
T ss_pred             CCCCCCccCCHHHHHHHHHHhCC
Confidence            78888 66677778899888876

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.29  E-value=1.3e-14  Score=113.16  Aligned_cols=106  Identities=18%  Similarity=0.223  Sum_probs=80.8

Q ss_pred             cCccccC--CccchhhccCCCCCcccccCCCceeecC--CCCcccCCCccchhhhhhccCCccccccccCcchhhhhhhc
Q 046965           78 NRMSMMN--NNHCHEENNGHPTSSEKKSSEARVFSCN--YCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAF  153 (286)
Q Consensus        78 n~~tc~~--~g~S~~~~~~~~~~H~rtHtgeKpf~C~--~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~~~~~a~~f  153 (286)
                      ..|.|..  |++.|.....+. .|+++|+++++|.|.  .|++.|.....|..|+++|+++++|.|..|++.+.......
T Consensus         5 ~~~~C~~~~C~~~f~~~~~l~-~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   83 (119)
T 2jp9_A            5 RPFMCAYPGCNKRYFKLSHLQ-MHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLK   83 (119)
T ss_dssp             CCBCCCSTTSCCCBSCHHHHH-HHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHH
T ss_pred             eeeeCCCCCCcchhCCHHHHH-HHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHH
Confidence            4578985  999999877554 899999999999999  79999999999999999999999999999999842222111


Q ss_pred             cC--CCccCcCCCccCCC--CCCC-CccccCCCCCCccCC
Q 046965          154 GN--QHFSFYSPYYSRFS--PYYG-SFNRSLGVKMNSMIH  188 (286)
Q Consensus       154 ~~--~H~~~~~py~s~~~--p~~g-s~~r~lgl~~Hs~iH  188 (286)
                      .|  .|.+. .||.   |  +.|| .|.+...|+.|.++|
T Consensus        84 ~H~~~h~~~-~~~~---C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           84 THTRTHTGE-KPFS---CRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHTC-CCEE---CCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHhcCC-CCee---CCCCCCccccCCHHHHHHHHhcC
Confidence            11  23222 2554   6  6788 566666788888776

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=8.7e-13  Score=87.47  Aligned_cols=45  Identities=27%  Similarity=0.441  Sum_probs=43.7

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.29  E-value=1.1e-12  Score=86.87  Aligned_cols=45  Identities=24%  Similarity=0.423  Sum_probs=43.5

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=9.6e-13  Score=86.90  Aligned_cols=45  Identities=24%  Similarity=0.352  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1e-12  Score=86.91  Aligned_cols=45  Identities=22%  Similarity=0.461  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=1.1e-12  Score=86.95  Aligned_cols=45  Identities=22%  Similarity=0.391  Sum_probs=43.5

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=9.9e-13  Score=86.23  Aligned_cols=44  Identities=27%  Similarity=0.496  Sum_probs=42.7

Q ss_pred             cccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           99 SEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        99 H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            78999999999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.1e-12  Score=86.59  Aligned_cols=45  Identities=24%  Similarity=0.425  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1e-12  Score=86.79  Aligned_cols=45  Identities=27%  Similarity=0.410  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=9.6e-13  Score=87.08  Aligned_cols=45  Identities=27%  Similarity=0.450  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1.1e-12  Score=86.94  Aligned_cols=45  Identities=27%  Similarity=0.451  Sum_probs=43.7

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            689999999999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=8.9e-13  Score=87.23  Aligned_cols=45  Identities=24%  Similarity=0.443  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=9.3e-13  Score=86.98  Aligned_cols=45  Identities=27%  Similarity=0.505  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.2e-12  Score=86.69  Aligned_cols=45  Identities=22%  Similarity=0.413  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.1e-12  Score=86.79  Aligned_cols=45  Identities=24%  Similarity=0.443  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=1.1e-12  Score=86.75  Aligned_cols=45  Identities=24%  Similarity=0.425  Sum_probs=43.5

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1.2e-12  Score=86.55  Aligned_cols=45  Identities=27%  Similarity=0.433  Sum_probs=43.5

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.28  E-value=1.9e-14  Score=121.87  Aligned_cols=108  Identities=19%  Similarity=0.304  Sum_probs=64.1

Q ss_pred             cCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcchhhhhhhccC--
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGN--  155 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~~~~~a~~f~~--  155 (286)
                      ..+.|..|++.|.....+. .|+++|+++++|.|..|++.|.....|..|+++|.++++|.|..|++.+......-.|  
T Consensus        48 ~~~~C~~C~~~f~~~~~l~-~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  126 (190)
T 2i13_A           48 KPYKCPECGKSFSDKKDLT-RHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQR  126 (190)
T ss_dssp             CCEECTTTCCEESSHHHHH-HHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCccCCCcCchhCCHHHHH-HHHHhcCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHH
Confidence            3456777777776655433 6677777777777777777777777777777777777777777777763211111110  


Q ss_pred             CCccCcCCCccCCCCCCC-CccccCCCCCCccCCCC
Q 046965          156 QHFSFYSPYYSRFSPYYG-SFNRSLGVKMNSMIHKP  190 (286)
Q Consensus       156 ~H~~~~~py~s~~~p~~g-s~~r~lgl~~Hs~iHkp  190 (286)
                      .|.+. .||.   |+.|| .|.+...|+.|.++|.+
T Consensus       127 ~h~~~-~~~~---C~~C~~~f~~~~~L~~H~~~H~~  158 (190)
T 2i13_A          127 THTGE-KPYK---CPECGKSFSREDNLHTHQRTHTG  158 (190)
T ss_dssp             HHHCC-CCEE---CTTTCCEESCHHHHHHHHHHHHC
T ss_pred             HhCCC-CCeE---CCCCCcccCCHHHHHHHHHhcCC
Confidence            12221 1343   66666 44455556677777655

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=1.3e-12  Score=86.46  Aligned_cols=45  Identities=22%  Similarity=0.275  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1e-12  Score=86.90  Aligned_cols=45  Identities=22%  Similarity=0.443  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.4e-12  Score=86.32  Aligned_cols=45  Identities=27%  Similarity=0.501  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.3e-12  Score=86.41  Aligned_cols=45  Identities=22%  Similarity=0.417  Sum_probs=43.2

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999875

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=1.1e-12  Score=86.77  Aligned_cols=45  Identities=29%  Similarity=0.519  Sum_probs=43.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            688999999999999999999999999999999999999999987

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.27  E-value=2.1e-13  Score=102.55  Aligned_cols=68  Identities=12%  Similarity=0.176  Sum_probs=61.2

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCC--ccccccccCcc
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQE--RAVAKRRQGVD  145 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgE--Kpy~C~~Cgk~  145 (286)
                      ...|.|..|++.|.....+ ..|+++|+++++|.|.+|++.|.....|..|+++|+++  ++|.|..|++.
T Consensus         5 ~~~~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~   74 (95)
T 2yt9_A            5 SSGVACEICGKIFRDVYHL-NRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKG   74 (95)
T ss_dssp             CSCEECSSSCCEESSSHHH-HHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCC
T ss_pred             CCCeECCCCCCccCChHHH-HHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccch
Confidence            3567899999999887654 48999999999999999999999999999999999987  99999999997

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=4.5e-13  Score=97.66  Aligned_cols=66  Identities=18%  Similarity=0.263  Sum_probs=59.7

Q ss_pred             Ccccc--CCccchhhccCCCCCccc-ccCCCceeecCC--CCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           79 RMSMM--NNNHCHEENNGHPTSSEK-KSSEARVFSCNY--CKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        79 ~~tc~--~~g~S~~~~~~~~~~H~r-tHtgeKpf~C~~--CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      .|.|.  +|++.|.....+. .|++ +|+++++|.|.+  |++.|.....|..|+++|+++++|.|..|++.
T Consensus         7 ~~~C~~~~C~~~f~~~~~L~-~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~   77 (79)
T 2dlk_A            7 GMPCDFPGCGRIFSNRQYLN-HHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPS   77 (79)
T ss_dssp             SEECSSTTTCCEESSHHHHH-HHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCC
T ss_pred             CccCCCCCCcCccCCHHHHH-HHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCC
Confidence            45665  5999999887654 8988 799999999999  99999999999999999999999999999997

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.4e-12  Score=86.42  Aligned_cols=45  Identities=22%  Similarity=0.366  Sum_probs=43.5

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.+|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=1.3e-12  Score=86.73  Aligned_cols=45  Identities=20%  Similarity=0.400  Sum_probs=43.4

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2e-12  Score=85.58  Aligned_cols=45  Identities=20%  Similarity=0.343  Sum_probs=43.5

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhh-hccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQN-AHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr-~HtgEKpy~C~~C  142 (286)
                      .|+++|++++||.|.+|++.|.....|..|++ +|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            58899999999999999999999999999999 9999999999987

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.24  E-value=1.1e-13  Score=102.99  Aligned_cols=66  Identities=20%  Similarity=0.306  Sum_probs=60.5

Q ss_pred             Ccccc--CCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           79 RMSMM--NNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        79 ~~tc~--~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      .|.|.  .|++.|.....+. .|+++|+++++|.|..|++.|.....|..|+++|+++++|.|..|++.
T Consensus         4 ~~~C~~~~C~~~f~~~~~l~-~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   71 (90)
T 1a1h_A            4 PYACPVESCDRRFSQSGSLT-RHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK   71 (90)
T ss_dssp             CEECCSSSCCCEESSHHHHH-HHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             ceECCCCCCCCccCCHHHHH-HHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCch
Confidence            46787  7999999877554 899999999999999999999999999999999999999999999998

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.9e-12  Score=84.88  Aligned_cols=45  Identities=24%  Similarity=0.440  Sum_probs=43.0

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            588999999999999999999999999999999999999999865

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.23  E-value=2.9e-14  Score=120.70  Aligned_cols=65  Identities=15%  Similarity=0.307  Sum_probs=31.8

Q ss_pred             ccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           80 MSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        80 ~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      +.|..|++.|.....+. .|+++|+++++|.|..|++.|.....|..|+++|+++++|.|..|++.
T Consensus        78 ~~C~~C~~~f~~~~~l~-~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  142 (190)
T 2i13_A           78 YKCPECGKSFSQRANLR-AHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKS  142 (190)
T ss_dssp             EECTTTCCEESCHHHHH-HHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             ccCcccCCccCCHHHHH-HHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcc
Confidence            44555555444443322 444455555555555555555555555555555555555555555544

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=5.2e-12  Score=83.63  Aligned_cols=44  Identities=25%  Similarity=0.453  Sum_probs=42.1

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.3e-12  Score=83.42  Aligned_cols=44  Identities=23%  Similarity=0.460  Sum_probs=42.1

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.1e-12  Score=82.96  Aligned_cols=44  Identities=23%  Similarity=0.458  Sum_probs=42.1

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            68899999999999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=5.8e-12  Score=83.40  Aligned_cols=44  Identities=25%  Similarity=0.447  Sum_probs=42.1

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999974

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6e-12  Score=81.32  Aligned_cols=42  Identities=21%  Similarity=0.384  Sum_probs=40.5

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAK  139 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C  139 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            488999999999999999999999999999999999999998

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.19  E-value=5.8e-12  Score=83.41  Aligned_cols=44  Identities=30%  Similarity=0.511  Sum_probs=42.1

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.5e-12  Score=83.02  Aligned_cols=44  Identities=27%  Similarity=0.536  Sum_probs=42.1

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.3e-12  Score=83.06  Aligned_cols=44  Identities=23%  Similarity=0.516  Sum_probs=42.2

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.2e-12  Score=82.79  Aligned_cols=44  Identities=25%  Similarity=0.483  Sum_probs=42.1

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999963

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.4e-12  Score=82.86  Aligned_cols=44  Identities=25%  Similarity=0.489  Sum_probs=42.1

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999974

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.4e-12  Score=83.02  Aligned_cols=45  Identities=22%  Similarity=0.462  Sum_probs=42.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .++++|++++||.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         2 s~~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            356899999999999999999999999999999999999999987

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.4e-12  Score=83.18  Aligned_cols=44  Identities=25%  Similarity=0.484  Sum_probs=41.9

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999963

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.8e-12  Score=82.50  Aligned_cols=44  Identities=25%  Similarity=0.542  Sum_probs=41.8

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57899999999999999999999999999999999999999973

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=8.8e-12  Score=81.60  Aligned_cols=43  Identities=23%  Similarity=0.445  Sum_probs=41.3

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR  140 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~  140 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            6889999999999999999999999999999999999999984

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.8e-12  Score=82.75  Aligned_cols=44  Identities=27%  Similarity=0.492  Sum_probs=42.1

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.9e-12  Score=83.03  Aligned_cols=44  Identities=25%  Similarity=0.474  Sum_probs=42.1

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.5e-12  Score=82.59  Aligned_cols=44  Identities=27%  Similarity=0.516  Sum_probs=42.1

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.18  E-value=7.7e-12  Score=80.95  Aligned_cols=42  Identities=24%  Similarity=0.435  Sum_probs=40.4

Q ss_pred             cccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccc
Q 046965           99 SEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR  140 (286)
Q Consensus        99 H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~  140 (286)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            789999999999999999999999999999999999999984

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.2e-12  Score=83.11  Aligned_cols=44  Identities=23%  Similarity=0.489  Sum_probs=42.0

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=1.9e-12  Score=102.65  Aligned_cols=69  Identities=12%  Similarity=0.024  Sum_probs=60.3

Q ss_pred             CccCccccCCccchhhccCCCCCccc-cc---CCCceeecCCCCcccCCCccchhh-hhhccCCccccccccCcc
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEK-KS---SEARVFSCNYCKREFSTSQALGGH-QNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~r-tH---tgeKpf~C~~CgK~F~sssaL~~H-qr~HtgEKpy~C~~Cgk~  145 (286)
                      ....|.|..||++|..+..+. .|++ +|   ++++||.|.+|++.|.....|..| +++|++++||.|..+...
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~-~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~~   88 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFT-FHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKRN   88 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHH-HHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCCS
T ss_pred             CCcCcCCCCCCCccCCHHHHH-HHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccCC
Confidence            445689999999999887654 8987 59   678999999999999999999999 899999999999987654

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.7e-12  Score=82.48  Aligned_cols=44  Identities=23%  Similarity=0.416  Sum_probs=42.1

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|+++++|.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.4e-12  Score=82.88  Aligned_cols=44  Identities=30%  Similarity=0.540  Sum_probs=42.1

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999974

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.18  E-value=1.6e-12  Score=94.27  Aligned_cols=60  Identities=15%  Similarity=0.264  Sum_probs=51.7

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccc
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAV  137 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy  137 (286)
                      ...|.|..|++.|.....+ ..|+++|+++++|.|.+|++.|.....|..|+++|++++||
T Consensus        15 ~~~~~C~~C~k~f~~~~~l-~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           15 DKPYKCDRCQASFRYKGNL-ASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCSBCCTTSSCCBSCHHHH-HHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCeECCCCCceeCCHHHH-HHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3467899999999887654 48889999999999999999999999999999999999886

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.6e-12  Score=82.98  Aligned_cols=44  Identities=25%  Similarity=0.483  Sum_probs=41.9

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CCSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.7e-12  Score=82.63  Aligned_cols=44  Identities=27%  Similarity=0.406  Sum_probs=42.0

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999973

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.5e-12  Score=80.83  Aligned_cols=42  Identities=29%  Similarity=0.462  Sum_probs=40.2

Q ss_pred             cccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccc
Q 046965           99 SEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR  140 (286)
Q Consensus        99 H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~  140 (286)
                      |+++|++++||.|.+|++.|.....|..|+++|++++||+|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            789999999999999999999999999999999999999983

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.6e-12  Score=82.23  Aligned_cols=44  Identities=23%  Similarity=0.463  Sum_probs=42.0

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999973

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8e-12  Score=82.56  Aligned_cols=44  Identities=25%  Similarity=0.467  Sum_probs=42.0

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999973

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8.1e-12  Score=81.45  Aligned_cols=43  Identities=23%  Similarity=0.393  Sum_probs=41.3

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR  140 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~  140 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            6889999999999999999999999999999999999999994

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.1e-11  Score=82.05  Aligned_cols=44  Identities=27%  Similarity=0.521  Sum_probs=41.9

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccC-Cccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQ-ERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~Htg-EKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++ ++||+|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            588999999999999999999999999999999999 99999974

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=6.6e-12  Score=81.28  Aligned_cols=42  Identities=19%  Similarity=0.336  Sum_probs=40.4

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAK  139 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C  139 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            1 GSSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            478999999999999999999999999999999999999998

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=7.4e-12  Score=81.82  Aligned_cols=43  Identities=23%  Similarity=0.415  Sum_probs=41.4

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR  140 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~  140 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++++|+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            6899999999999999999999999999999999999999994

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.2e-11  Score=81.02  Aligned_cols=43  Identities=21%  Similarity=0.411  Sum_probs=41.4

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR  140 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~  140 (286)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            6889999999999999999999999999999999999999994

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=9.1e-12  Score=82.46  Aligned_cols=44  Identities=32%  Similarity=0.573  Sum_probs=42.0

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8e-12  Score=82.39  Aligned_cols=44  Identities=23%  Similarity=0.460  Sum_probs=42.0

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58899999999999999999999999999999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=8.1e-12  Score=82.68  Aligned_cols=44  Identities=30%  Similarity=0.486  Sum_probs=42.0

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      +|+++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999973

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1e-11  Score=80.92  Aligned_cols=43  Identities=28%  Similarity=0.497  Sum_probs=41.3

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR  140 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~  140 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            5889999999999999999999999999999999999999994

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.16  E-value=8.3e-13  Score=97.93  Aligned_cols=66  Identities=12%  Similarity=0.214  Sum_probs=60.4

Q ss_pred             CccccC--CccchhhccCCCCCcccccCCCceeecC--CCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           79 RMSMMN--NNHCHEENNGHPTSSEKKSSEARVFSCN--YCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        79 ~~tc~~--~g~S~~~~~~~~~~H~rtHtgeKpf~C~--~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      .|.|..  |++.|.....+ ..|+++|+++++|.|.  .|++.|.....|..|+++|+++++|.|..|++.
T Consensus         5 ~~~C~~~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   74 (89)
T 2wbs_A            5 THTCDYAGCGKTYTKSSHL-KAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRA   74 (89)
T ss_dssp             CEECCSTTTCCEESSHHHH-HHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCE
T ss_pred             CeeCCCCCCCCcCCCHHHH-HHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcc
Confidence            467888  99999887755 4899999999999997  599999999999999999999999999999998

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.1e-11  Score=81.10  Aligned_cols=43  Identities=23%  Similarity=0.498  Sum_probs=41.2

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR  140 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~  140 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6889999999999999999999999999999999999999983

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=2.6e-12  Score=99.41  Aligned_cols=67  Identities=12%  Similarity=0.174  Sum_probs=60.7

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ...|.| .|++.|.....+. .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|..|++.
T Consensus         8 ~k~~~C-~C~~~f~~~~~l~-~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   74 (110)
T 2csh_A            8 DKLYPC-QCGKSFTHKSQRD-RHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR   74 (110)
T ss_dssp             CCCEEC-TTSCEESSHHHHH-HHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCE
T ss_pred             CCCEec-cCCCccCCHHHHH-HHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcch
Confidence            456789 8999998877554 899999999999999999999999999999999999999999999998

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.1e-11  Score=80.45  Aligned_cols=42  Identities=21%  Similarity=0.404  Sum_probs=40.3

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAK  139 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C  139 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            1 GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            378999999999999999999999999999999999999998

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.15  E-value=7.4e-13  Score=112.00  Aligned_cols=109  Identities=17%  Similarity=0.213  Sum_probs=66.2

Q ss_pred             cCccc--cCCccchhhccCCCCCcccccCCCceeec--CCCCcccCCCccchhhhhhccCCcccccc--ccCcchhhhhh
Q 046965           78 NRMSM--MNNNHCHEENNGHPTSSEKKSSEARVFSC--NYCKREFSTSQALGGHQNAHKQERAVAKR--RQGVDQDVGAA  151 (286)
Q Consensus        78 n~~tc--~~~g~S~~~~~~~~~~H~rtHtgeKpf~C--~~CgK~F~sssaL~~Hqr~HtgEKpy~C~--~Cgk~~~~~a~  151 (286)
                      ..|.|  ..|++.|.....+ ..|+++|+++++|.|  ..|++.|.....|..|+++|.++++|.|.  .|++.+.....
T Consensus        11 ~~~~C~~~~C~~~f~~~~~L-~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   89 (190)
T 1tf6_A           11 KRYICSFADCGAAYNKNWKL-QAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKAN   89 (190)
T ss_dssp             CCCBCSSTTTCCBCSSHHHH-HHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHH
T ss_pred             cceeCCCCCCcchhCCHHHH-HHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHH
Confidence            34566  5677777766543 367777777777777  66777777777777777777777777777  67776322221


Q ss_pred             hcc---CCCccCcCCCccCCC--CCCC-CccccCCCCCCccCCCC
Q 046965          152 AFG---NQHFSFYSPYYSRFS--PYYG-SFNRSLGVKMNSMIHKP  190 (286)
Q Consensus       152 ~f~---~~H~~~~~py~s~~~--p~~g-s~~r~lgl~~Hs~iHkp  190 (286)
                      ...   ..|.....||.   |  +.|| .|.....|+.|.++|.+
T Consensus        90 l~~H~~~~h~~~~~~~~---C~~~~C~k~f~~~~~L~~H~~~H~~  131 (190)
T 1tf6_A           90 MKKHFNRFHNIKICVYV---CHFENCGKAFKKHNQLKVHQFSHTQ  131 (190)
T ss_dssp             HHHHHHTTSSTTTSCCE---ECSSSSCEECSSHHHHHHHHGGGSS
T ss_pred             HHHHHHHhcCCCcceee---CCCCCCccccCCHHHHHHHHHHhCC
Confidence            111   11211112333   5  5566 45555567777777765

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=9e-12  Score=82.30  Aligned_cols=43  Identities=26%  Similarity=0.386  Sum_probs=41.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR  140 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~  140 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            6889999999999999999999999999999999999999996

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.15  E-value=1.2e-11  Score=79.87  Aligned_cols=42  Identities=21%  Similarity=0.381  Sum_probs=40.3

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAK  139 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C  139 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|
T Consensus         1 ~H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            1 GSSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            378999999999999999999999999999999999999998

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1.1e-11  Score=81.81  Aligned_cols=44  Identities=25%  Similarity=0.496  Sum_probs=42.1

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .|+++|++++||.|++|++.|.....|..|+++|++++||+|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            68899999999999999999999999999999999999999973

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.15  E-value=2.5e-12  Score=93.03  Aligned_cols=48  Identities=27%  Similarity=0.377  Sum_probs=45.2

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      .+.++|++++||.|.+|++.|.....|..|+++|+++++|+|..|++.
T Consensus         4 ~~~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~   51 (72)
T 1x6e_A            4 GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKA   51 (72)
T ss_dssp             CCCCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCE
T ss_pred             CCCcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcc
Confidence            356889999999999999999999999999999999999999999998

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.15  E-value=1.5e-12  Score=100.73  Aligned_cols=66  Identities=12%  Similarity=0.043  Sum_probs=48.6

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ....|.|..|++.|.....+. .|+++|  +++|.|.+|++.|.....|..|++ |+++++|+|..|++.
T Consensus        13 ~~~~~~C~~C~~~f~~~~~l~-~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~   78 (107)
T 1wjp_A           13 NKEVYQCRLCNAKLSSLLEQG-SHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRT   78 (107)
T ss_dssp             CCCCCBCTTTCCBCSSHHHHH-HHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEE
T ss_pred             CCcCeECCCCCCccCCHHHHH-HHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccch
Confidence            334577888888777665443 677777  367888888888888888888875 888888888888776

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=7.2e-12  Score=82.93  Aligned_cols=44  Identities=23%  Similarity=0.405  Sum_probs=42.1

Q ss_pred             cccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           99 SEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        99 H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .+++|+++++|.|.+|++.|.....|..|+++|++++||+|..|
T Consensus         3 ~~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            46899999999999999999999999999999999999999987

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.14  E-value=4.9e-13  Score=108.94  Aligned_cols=61  Identities=11%  Similarity=0.256  Sum_probs=31.0

Q ss_pred             CCccchhhccCCCCCcccccCCCceeecCC--CCcccCCCccchhhhhhccCCccccccc--cCcc
Q 046965           84 NNNHCHEENNGHPTSSEKKSSEARVFSCNY--CKREFSTSQALGGHQNAHKQERAVAKRR--QGVD  145 (286)
Q Consensus        84 ~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~--CgK~F~sssaL~~Hqr~HtgEKpy~C~~--Cgk~  145 (286)
                      .|++.|.....+ ..|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|..  |++.
T Consensus        44 ~c~~~f~~~~~l-~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  108 (155)
T 2gli_A           44 RELRPFKAQYML-VVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKA  108 (155)
T ss_dssp             TTTCCCSSHHHH-HHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCE
T ss_pred             chhhhhhhHHHH-HHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCc
Confidence            334444444332 24555555555555543  5555555555555555555555555554  5554

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.13  E-value=1.6e-12  Score=98.46  Aligned_cols=69  Identities=10%  Similarity=0.122  Sum_probs=61.5

Q ss_pred             CccCcccc--CCccchhhccCCCCCcccccCCCceeecC--CCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           76 LFNRMSMM--NNNHCHEENNGHPTSSEKKSSEARVFSCN--YCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        76 e~n~~tc~--~~g~S~~~~~~~~~~H~rtHtgeKpf~C~--~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ....|.|.  .|++.|.....+ ..|+++|+++++|.|.  .|++.|.....|..|+++|+++++|+|..|++.
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   84 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHL-KAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRS   84 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHH-HHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCB
T ss_pred             cCcceEcCCCCCCCcccCHHHH-HHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCc
Confidence            34567888  499999887755 4899999999999996  599999999999999999999999999999998

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=1e-11  Score=82.23  Aligned_cols=43  Identities=33%  Similarity=0.584  Sum_probs=41.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR  140 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~  140 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            6889999999999999999999999999999999999999996

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=2.1e-11  Score=80.12  Aligned_cols=42  Identities=24%  Similarity=0.362  Sum_probs=40.6

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAK  139 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C  139 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            688999999999999999999999999999999999999987

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.12  E-value=3.9e-12  Score=99.22  Aligned_cols=69  Identities=4%  Similarity=-0.024  Sum_probs=61.0

Q ss_pred             ccCccccCCccchhhccCCCCCcccc--cCCCceee-cCCCCccc--CCCccchhhhhhccCCccccccccCcch
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKK--SSEARVFS-CNYCKREF--STSQALGGHQNAHKQERAVAKRRQGVDQ  146 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rt--HtgeKpf~-C~~CgK~F--~sssaL~~Hqr~HtgEKpy~C~~Cgk~~  146 (286)
                      ...|.|..|++.|.....+. .|+++  |.+++++. |.+|++.|  .....|..|+++|++++||.|.+|++.+
T Consensus        17 ~~~~~C~~C~k~f~~~~~L~-~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f   90 (115)
T 2dmi_A           17 ASKFRCKDCSAAYDTLVELT-VHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSF   90 (115)
T ss_dssp             CCSEEBSSSSCEESSHHHHH-HHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBC
T ss_pred             CCCEECCccCchhcCHHHHH-HHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCcc
Confidence            35689999999999887654 88888  88888765 99999999  8999999999999999999999999984

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.3e-11  Score=80.67  Aligned_cols=45  Identities=24%  Similarity=0.440  Sum_probs=42.7

Q ss_pred             CcccccCCCceeecC--CCCcccCCCccchhhhhhccCCcccccccc
Q 046965           98 SSEKKSSEARVFSCN--YCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~--~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      .|.++|++++||.|.  .|++.|.....|..|+++|++++||+|..|
T Consensus         2 ~~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467899999999998  899999999999999999999999999987

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=2.2e-11  Score=80.22  Aligned_cols=43  Identities=21%  Similarity=0.385  Sum_probs=41.3

Q ss_pred             cccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccC
Q 046965          101 KKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQG  143 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cg  143 (286)
                      .+|++++||.|.+|++.|.....|..|+++|+++++|.|..||
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            5789999999999999999999999999999999999999996

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=2.4e-11  Score=79.66  Aligned_cols=43  Identities=26%  Similarity=0.331  Sum_probs=40.9

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR  140 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~  140 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|++++||+|.
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            4789999999999999999999999999999999999999994

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.10  E-value=3.4e-12  Score=107.91  Aligned_cols=108  Identities=14%  Similarity=0.142  Sum_probs=77.8

Q ss_pred             cCccc--cCCccchhhccCCCCCcccccCCCceeecC--CCCcccCCCccchhhh-hhc-cCCccccc--cccCcchhhh
Q 046965           78 NRMSM--MNNNHCHEENNGHPTSSEKKSSEARVFSCN--YCKREFSTSQALGGHQ-NAH-KQERAVAK--RRQGVDQDVG  149 (286)
Q Consensus        78 n~~tc--~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~--~CgK~F~sssaL~~Hq-r~H-tgEKpy~C--~~Cgk~~~~~  149 (286)
                      ..|.|  ..|++.|.....+. .|+++|+++++|.|.  .|++.|.....|..|+ +.| .++++|.|  ..|++.+...
T Consensus        41 ~~~~C~~~~C~~~f~~~~~l~-~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~  119 (190)
T 1tf6_A           41 KPFPCKEEGCEKGFTSLHHLT-RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKH  119 (190)
T ss_dssp             CSSCCSSTTCCCCCSSHHHHH-HHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSH
T ss_pred             CCccCCCCCCChhhCCHHHHH-HHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCH
Confidence            35678  77888888776544 788889998999998  7999999999999998 677 46788999  8898874222


Q ss_pred             hhhcc--CCCccCcCCCccCCCCC--CC-CccccCCCCCCccCCCC
Q 046965          150 AAAFG--NQHFSFYSPYYSRFSPY--YG-SFNRSLGVKMNSMIHKP  190 (286)
Q Consensus       150 a~~f~--~~H~~~~~py~s~~~p~--~g-s~~r~lgl~~Hs~iHkp  190 (286)
                      .....  ..|.+. .||.   |+.  || .|.+...|+.|.++|.+
T Consensus       120 ~~L~~H~~~H~~~-~~~~---C~~~~C~k~F~~~~~L~~H~~~H~~  161 (190)
T 1tf6_A          120 NQLKVHQFSHTQQ-LPYE---CPHEGCDKRFSLPSRLKRHEKVHAG  161 (190)
T ss_dssp             HHHHHHHGGGSSS-CSSB---CCSSSCCCBCSSHHHHHHHHTSSCS
T ss_pred             HHHHHHHHHhCCC-CCcc---CCCCCCCchhcCHHHHHHHHHHhCC
Confidence            21111  123332 2554   766  88 66666778888888877

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=3e-11  Score=80.87  Aligned_cols=44  Identities=16%  Similarity=0.332  Sum_probs=41.6

Q ss_pred             cccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCc
Q 046965          101 KKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGV  144 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk  144 (286)
                      ..|+++++|.|.+|++.|.....|..|+++|++++||.|..|+|
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             SCCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            45788999999999999999999999999999999999999986

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=2.9e-11  Score=79.61  Aligned_cols=44  Identities=25%  Similarity=0.443  Sum_probs=40.9

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      .+.++|++++||.|.+|++.|.....|..|+++|++++||+|.+
T Consensus         2 s~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            35688999999999999999999999999999999999999963

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=2.7e-12  Score=98.84  Aligned_cols=51  Identities=14%  Similarity=0.119  Sum_probs=47.9

Q ss_pred             CCCCcccccCCCceeecCCCCcccC-CCccchhhhhhccC-CccccccccCcc
Q 046965           95 HPTSSEKKSSEARVFSCNYCKREFS-TSQALGGHQNAHKQ-ERAVAKRRQGVD  145 (286)
Q Consensus        95 ~~~~H~rtHtgeKpf~C~~CgK~F~-sssaL~~Hqr~Htg-EKpy~C~~Cgk~  145 (286)
                      .+..|+++|+++++|.|.+|++.|. ....|..|+++|++ +++|.|..|++.
T Consensus        11 ~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~   63 (98)
T 2gqj_A           11 PEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQ   63 (98)
T ss_dssp             SCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCC
T ss_pred             cHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCc
Confidence            4458999999999999999999999 99999999999999 999999999998

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=4.3e-11  Score=79.27  Aligned_cols=43  Identities=19%  Similarity=0.315  Sum_probs=40.6

Q ss_pred             cccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           99 SEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        99 H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      ++++|++++||.|.+|++.|.....|..|+++|++++||+|..
T Consensus         3 ~~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            5689999999999999999999999999999999999999963

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.05  E-value=5.5e-12  Score=102.66  Aligned_cols=118  Identities=14%  Similarity=0.132  Sum_probs=87.0

Q ss_pred             ccccCCccchhhccCCCCCccc---ccCCCceeecCCC-----CcccCCCccchhhhhhccCCccccccc--cCcchhhh
Q 046965           80 MSMMNNNHCHEENNGHPTSSEK---KSSEARVFSCNYC-----KREFSTSQALGGHQNAHKQERAVAKRR--QGVDQDVG  149 (286)
Q Consensus        80 ~tc~~~g~S~~~~~~~~~~H~r---tHtgeKpf~C~~C-----gK~F~sssaL~~Hqr~HtgEKpy~C~~--Cgk~~~~~  149 (286)
                      +.|..|++.|.....+. .|++   +|+++++|.|.+|     ++.|.....|..|+++|+++++|.|..  |++.+...
T Consensus         4 ~~C~~C~~~f~~~~~L~-~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   82 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLV-HHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRL   82 (155)
T ss_dssp             CCBTTCCCBCSCHHHHH-HHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSH
T ss_pred             CCcCCCccccCCHHHHH-HHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCH
Confidence            57999999999877654 8887   7999999999853     499999999999999999999999985  99984322


Q ss_pred             hhhccC--CCccCcCCCccCCCCC--CC-CccccCCCCCCc-cCCCCCCCCCCCCCC----CCcccC
Q 046965          150 AAAFGN--QHFSFYSPYYSRFSPY--YG-SFNRSLGVKMNS-MIHKPVAYGSHPWPS----ANYRFG  206 (286)
Q Consensus       150 a~~f~~--~H~~~~~py~s~~~p~--~g-s~~r~lgl~~Hs-~iHkp~~~~~~p~~~----~g~~~g  206 (286)
                      .....|  .|.+. .||.   |+.  || .|.+...|+.|. ++|.+..    ||.+    +|..|.
T Consensus        83 ~~l~~H~~~h~~~-~~~~---C~~~~C~~~f~~~~~L~~H~~~~H~~~~----~~~C~~~~C~~~f~  141 (155)
T 2gli_A           83 ENLKTHLRSHTGE-KPYM---CEHEGCSKAFSNASDRAKHQNRTHSNEK----PYVCKLPGCTKRYT  141 (155)
T ss_dssp             HHHHHHHHHTTTC-CCEE---CCSTTCCCEESSSSTTHHHHHHTTCSCC----CEECCSTTTCCEES
T ss_pred             HHHHHHHHHcCCC-CCee---CCCCCCCCccCCHHHHHHHHHHhcCCCC----CeeCCCCCCccccC
Confidence            211121  23322 2555   776  88 677888899998 8997732    5554    455553

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.03  E-value=1.4e-11  Score=92.68  Aligned_cols=61  Identities=10%  Similarity=0.053  Sum_probs=55.2

Q ss_pred             ccccCCccchhhccCCCCCcccc-cCCCce--------eecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           80 MSMMNNNHCHEENNGHPTSSEKK-SSEARV--------FSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        80 ~tc~~~g~S~~~~~~~~~~H~rt-HtgeKp--------f~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      +.|..|++.|.....+. .|+++ |+++++        |.|.+|++.|.....|..|+++|++++||+|.+
T Consensus        26 ~~C~~C~k~f~~~~~L~-~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELV-THVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             SSCCCCCCCCSSHHHHH-HHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             CcccccccccCCHHHHH-HHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            46999999999887654 89987 999988        999999999999999999999999999999974

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.02  E-value=2.9e-11  Score=88.92  Aligned_cols=48  Identities=21%  Similarity=0.379  Sum_probs=29.1

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCC----ccccccccCcc
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQE----RAVAKRRQGVD  145 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgE----Kpy~C~~Cgk~  145 (286)
                      .|+++|++++||.|.+|++.|.....|..|++.|..+    ++|.|..|++.
T Consensus         5 ~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~   56 (86)
T 1x6h_A            5 SSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKT   56 (86)
T ss_dssp             CCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCE
T ss_pred             cccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCCh
Confidence            4556666666666666666666666666666554443    55666666665

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.02  E-value=1.2e-10  Score=84.96  Aligned_cols=50  Identities=18%  Similarity=0.284  Sum_probs=46.2

Q ss_pred             CCCcccccCCCceeecCCCCcccCCCccchhhhh-hccCC-ccccccccCcc
Q 046965           96 PTSSEKKSSEARVFSCNYCKREFSTSQALGGHQN-AHKQE-RAVAKRRQGVD  145 (286)
Q Consensus        96 ~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr-~HtgE-Kpy~C~~Cgk~  145 (286)
                      ..+|+++|++++||.|.+|++.|.....|..|++ .|+++ ++|+|..|++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~   54 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTV   54 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCE
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCc
Confidence            3479999999999999999999999999999997 78875 89999999998

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=9.6e-11  Score=90.06  Aligned_cols=50  Identities=18%  Similarity=0.337  Sum_probs=45.8

Q ss_pred             CCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           96 PTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        96 ~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ...|.++|++++||.|.+|++.|.....|..|+++|++++||+|..|.+.
T Consensus        13 ~~~~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~   62 (88)
T 1x6f_A           13 IILGNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERR   62 (88)
T ss_dssp             CCCCCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCC
T ss_pred             eeccccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhH
Confidence            34567889999999999999999999999999999999999999988765

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.02  E-value=1e-10  Score=75.28  Aligned_cols=39  Identities=26%  Similarity=0.470  Sum_probs=37.7

Q ss_pred             cccCCCceeecCCCCcccCCCccchhhhhhccCCccccc
Q 046965          101 KKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAK  139 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C  139 (286)
                      ++|++++||.|.+|++.|.....|..|+++|++++||+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            679999999999999999999999999999999999998

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=5.8e-11  Score=86.60  Aligned_cols=47  Identities=30%  Similarity=0.507  Sum_probs=44.0

Q ss_pred             cccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           99 SEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        99 H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      +...+.++++|.|.+|++.|.....|..|+++|+++++|.|..|++.
T Consensus         9 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   55 (77)
T 2cot_A            9 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKA   55 (77)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCE
T ss_pred             CcCcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCc
Confidence            34667889999999999999999999999999999999999999998

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.01  E-value=1e-10  Score=76.52  Aligned_cols=41  Identities=24%  Similarity=0.377  Sum_probs=39.1

Q ss_pred             cccCCCceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965          101 KKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      ++|++++||.|.+|++.|.....|..|+++|++++||+|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            67999999999999999999999999999999999999974

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.01  E-value=2.8e-11  Score=86.78  Aligned_cols=44  Identities=23%  Similarity=0.290  Sum_probs=30.7

Q ss_pred             ccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965          102 KSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       102 tHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      .|+++++|.|.+|++.|.....|..|+++|+++++|.|..|++.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~   46 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFD   46 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCE
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCc
Confidence            35666777777777777777777777777777777777777665

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.00  E-value=2.6e-11  Score=86.91  Aligned_cols=61  Identities=15%  Similarity=0.207  Sum_probs=54.8

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccc
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVA  138 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~  138 (286)
                      ...|.|..|++.|.....+. .|+++|+++++|.|.+|++.|.....|..|+++|++++|..
T Consensus         7 ~~~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            7 GHPEKCSECSYSCSSKAALR-IHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             CCSEECSSSSCEESSHHHHH-HHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCeECCCCCcccCCHHHHH-HHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            35689999999999887654 89999999999999999999999999999999999998743

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.00  E-value=1.9e-11  Score=95.01  Aligned_cols=68  Identities=16%  Similarity=0.307  Sum_probs=61.8

Q ss_pred             cCcccc--CCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccc--cccCcch
Q 046965           78 NRMSMM--NNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAK--RRQGVDQ  146 (286)
Q Consensus        78 n~~tc~--~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C--~~Cgk~~  146 (286)
                      ..+.|.  .|++.|.....+. .|+++|+++++|.|.+|++.|.....|..|+++|+++++|.|  ..|++.+
T Consensus        35 ~~~~C~~~~C~~~f~~~~~l~-~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f  106 (119)
T 2jp9_A           35 KPYQCDFKDCERRFSRSDQLK-RHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKF  106 (119)
T ss_dssp             CCEECCSTTCCCEESSHHHHH-HHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEE
T ss_pred             CCccCCCCCCcCccCCHHHHH-HHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCcccc
Confidence            346888  8999999877554 899999999999999999999999999999999999999999  7999983

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.00  E-value=1.3e-11  Score=95.80  Aligned_cols=47  Identities=15%  Similarity=0.155  Sum_probs=43.2

Q ss_pred             CcccccCCCceeecCCCCccc-CCCccchhhhhhccCCccccccccCcc
Q 046965           98 SSEKKSSEARVFSCNYCKREF-STSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F-~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      .|++.|+++++|.|++|++.| .....|..|+++| ++++|.|.+|++.
T Consensus        24 ~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~   71 (96)
T 2ctd_A           24 QWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQ   71 (96)
T ss_dssp             HHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCC
T ss_pred             HHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCe
Confidence            567888899999999999999 8999999999999 9999999999998

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=1.6e-10  Score=79.39  Aligned_cols=45  Identities=24%  Similarity=0.416  Sum_probs=42.9

Q ss_pred             cccCCCceeecCCCCcccCCCccchhhhh-hccCCccccccccCcc
Q 046965          101 KKSSEARVFSCNYCKREFSTSQALGGHQN-AHKQERAVAKRRQGVD  145 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~sssaL~~Hqr-~HtgEKpy~C~~Cgk~  145 (286)
                      ..|++++||.|.+|++.|.....|..|++ +|++++||+|.+|++.
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~   50 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSG   50 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCS
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCC
Confidence            56889999999999999999999999997 9999999999999998

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.99  E-value=1e-10  Score=85.91  Aligned_cols=69  Identities=12%  Similarity=0.211  Sum_probs=61.0

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCC----ceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEA----RVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtge----Kpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ....|.|..|++.|.....+. .|+++|..+    ++|.|.+|++.|.....|..|+++|++++++.|..|+.+
T Consensus        12 ~~k~~~C~~C~~~f~~~~~l~-~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~   84 (86)
T 1x6h_A           12 GEKPYACSHCDKTFRQKQLLD-MHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPS   84 (86)
T ss_dssp             CCCCEECSSSSCEESSHHHHH-HHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCC
T ss_pred             CCCCCcCCCCCCccCCHHHHH-HHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCC
Confidence            445689999999999887554 888877665    799999999999999999999999999999999999876

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.99  E-value=8.8e-11  Score=80.60  Aligned_cols=51  Identities=14%  Similarity=0.229  Sum_probs=43.8

Q ss_pred             cchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccc
Q 046965           87 HCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVA  138 (286)
Q Consensus        87 ~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~  138 (286)
                      +.|..... +..|+++|++++||.|.+|++.|.....|..|+++|++++||.
T Consensus         4 k~~~~~~~-l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPG-TEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSC-CCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcc-hhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            33444443 4589999999999999999999999999999999999999984

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.99  E-value=5.3e-11  Score=92.92  Aligned_cols=68  Identities=16%  Similarity=0.237  Sum_probs=60.7

Q ss_pred             cCccccCCccchhhccCCCCCccc---ccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcch
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEK---KSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQ  146 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~r---tHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~~  146 (286)
                      ..|.|..|++.|.....+. .|++   .|.++++|.|.+|++.|.....|..|+++|++++||.|..|++.+
T Consensus        34 ~~~~C~~C~~~f~~~~~l~-~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  104 (124)
T 2dlq_A           34 KPFECPKCGKCYFRKENLL-EHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQF  104 (124)
T ss_dssp             CSCBCTTTCCBCSSHHHHH-HHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEE
T ss_pred             CCeECCCCCchhcCHHHHH-HHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchh
Confidence            4578999999998877554 7777   468899999999999999999999999999999999999999983

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.99  E-value=3.3e-11  Score=82.54  Aligned_cols=55  Identities=15%  Similarity=0.294  Sum_probs=45.5

Q ss_pred             ccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCc
Q 046965           80 MSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus        80 ~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      |.|..|++.|.....+. .|+++|++++||.|.+|++.|.....|..|+++|++++
T Consensus         2 ~~C~~C~~~f~~~~~l~-~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLK-KHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CBCTTTCCBCSSHHHHH-HHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CcCCCCcCcCCCHHHHH-HHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57888888888776544 78888888888888888888888888888888888765

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=98.98  E-value=6.9e-11  Score=96.49  Aligned_cols=66  Identities=14%  Similarity=0.232  Sum_probs=61.1

Q ss_pred             ccccCCccchhhccCCCCCcccccCCCceeecCC--CCcccCCCccchhhhhhccCCccccccc--cCcch
Q 046965           80 MSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY--CKREFSTSQALGGHQNAHKQERAVAKRR--QGVDQ  146 (286)
Q Consensus        80 ~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~--CgK~F~sssaL~~Hqr~HtgEKpy~C~~--Cgk~~  146 (286)
                      +.|..|++.|.....+ ..|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|..  |++.+
T Consensus        63 ~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f  132 (155)
T 2rpc_A           63 EECPREGKSFKAKYKL-VNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRF  132 (155)
T ss_dssp             TTCTTSSCCCSSHHHH-HHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCB
T ss_pred             cCCCCcccccCCHHHH-HHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCcc
Confidence            6899999999887755 48999999999999998  9999999999999999999999999996  99984

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.98  E-value=1.2e-10  Score=82.68  Aligned_cols=46  Identities=15%  Similarity=0.224  Sum_probs=42.8

Q ss_pred             CCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           97 TSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        97 ~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ..|+++|++++||.|++|++.|.....|.   ++|++++||.|..|++.
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~   48 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCB
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCc
Confidence            47899999999999999999999887776   89999999999999998

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.98  E-value=1.4e-11  Score=95.21  Aligned_cols=85  Identities=16%  Similarity=0.235  Sum_probs=64.4

Q ss_pred             cccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcchhhhhhhcc--CCCccCcCCCccCCCCCCC-Cccc
Q 046965          101 KKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFG--NQHFSFYSPYYSRFSPYYG-SFNR  177 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~~~~~a~~f~--~~H~~~~~py~s~~~p~~g-s~~r  177 (286)
                      ..|+++++|.| .|++.|.....|..|+++|.++++|.|..|++.+........  ..|... .||.   |+.|+ .|.+
T Consensus         3 ~~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~~---C~~C~~~f~~   77 (110)
T 2csh_A            3 SGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI-KPYE---CNICAKRFMW   77 (110)
T ss_dssp             CCCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCC-CCEE---CSSSCCEESC
T ss_pred             CCCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCC-CCee---CCCCcchhcC
Confidence            46899999999 999999999999999999999999999999998322221111  123222 2444   88888 5666


Q ss_pred             cCCCCCCccCCCC
Q 046965          178 SLGVKMNSMIHKP  190 (286)
Q Consensus       178 ~lgl~~Hs~iHkp  190 (286)
                      ...|+.|.++|.+
T Consensus        78 ~~~l~~H~~~~~~   90 (110)
T 2csh_A           78 RDSFHRHVTSCTK   90 (110)
T ss_dssp             HHHHHHHHHHHHH
T ss_pred             HHHHHHHHHHccc
Confidence            6778889888765

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.97  E-value=7.2e-11  Score=90.59  Aligned_cols=45  Identities=16%  Similarity=0.204  Sum_probs=33.8

Q ss_pred             cccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965          101 KKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ..+...++|.|++|++.|.....|..|+++|++++||+|.+|++.
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~   65 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPAT   65 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCE
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCE
Confidence            456667777777777777777777777777777777777777776

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.97  E-value=4.1e-11  Score=91.92  Aligned_cols=59  Identities=20%  Similarity=0.301  Sum_probs=52.4

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhh-hhccCCc
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQ-NAHKQER  135 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hq-r~HtgEK  135 (286)
                      ....+.|..||++|..+..+. .|+++|++++||.|.+|++.|.....|..|+ ++|++|.
T Consensus        25 ~~~~h~C~~Cgk~F~~~~~L~-~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           25 SAECHLCPVCGESFASKGAQE-RHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCTTEECTTSCCEESSHHHHH-HHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCEECCCCCCCcCcHHHHh-hhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            345678999999999988655 9999999999999999999999999999996 6898874

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=8.9e-11  Score=83.54  Aligned_cols=57  Identities=7%  Similarity=0.134  Sum_probs=47.9

Q ss_pred             cCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      ..|.|..|++.|.....+..        +++|.|.+|++.|.....|..|+++|+++++|+|..|
T Consensus        17 ~~~~C~~C~k~f~~~~~l~~--------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           17 RSQKCSKCGIIFIRRSTLSR--------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SEEECSSSCCEEECCCCCCC--------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCeeCCcccchhCCHHHhCc--------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            45788889998888776652        7889999999999999999999999999999998877

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=98.95  E-value=8.5e-11  Score=92.31  Aligned_cols=67  Identities=15%  Similarity=0.235  Sum_probs=61.1

Q ss_pred             cCccccCCccchhhccCCCCCcccccCCCceeecCC--CCcccCCCccchhhhhhccCCcccccc--ccCcc
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY--CKREFSTSQALGGHQNAHKQERAVAKR--RQGVD  145 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~--CgK~F~sssaL~~Hqr~HtgEKpy~C~--~Cgk~  145 (286)
                      ..+.|..|++.|.....+. .|+++|+++++|.|.+  |++.|.....|..|+++|+++++|.|.  .|++.
T Consensus        33 ~~~~C~~C~~~f~~~~~l~-~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  103 (124)
T 1ubd_C           33 RVHVCAECGKAFVESSKLK-RHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKK  103 (124)
T ss_dssp             CCEECTTTCCEESSHHHHH-HHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCC
T ss_pred             CCeECCCCCchhCCHHHHH-HHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCc
Confidence            3578999999999887654 8999999999999986  999999999999999999999999995  59998

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=98.95  E-value=4.7e-11  Score=86.48  Aligned_cols=45  Identities=18%  Similarity=0.431  Sum_probs=42.3

Q ss_pred             cccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965          101 KKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ..++++++|+|..|++.|.....|..|+++|+++++|+|..|++.
T Consensus        10 ~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~   54 (74)
T 2lce_A           10 HMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQ   54 (74)
T ss_dssp             -CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCE
T ss_pred             cccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCch
Confidence            457789999999999999999999999999999999999999998

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=98.92  E-value=1.5e-10  Score=88.67  Aligned_cols=61  Identities=16%  Similarity=0.275  Sum_probs=55.4

Q ss_pred             cCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccc
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAK  139 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C  139 (286)
                      ..+.|..|++.|.....+ ..|+++|+++++|.|.+|++.|.....|..|+++|+++++|.+
T Consensus        44 ~~~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           44 RPYTCDICHKAFRRQDHL-RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             CCCBCSSSCCBCSCHHHH-HHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             CCcCCCCccchhCCHHHH-HHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            457899999999887754 4899999999999999999999999999999999999999865

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.91  E-value=1.4e-11  Score=92.11  Aligned_cols=65  Identities=12%  Similarity=0.228  Sum_probs=59.0

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      .|.|..|++.|.....+ ..|+++|++++||.|.+|++.|.....|..|+++|++ ++|.|..|++.
T Consensus         3 ~~~C~~C~k~f~~~~~L-~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~   67 (88)
T 1llm_C            3 PFQCRICMRNFSRSDHL-TTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEEL   67 (88)
T ss_dssp             CEECTTTCCEESCHHHH-HHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHH
T ss_pred             CCcCCCCCCccCCHHHH-HHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHH
Confidence            47899999999987755 4899999999999999999999999999999999884 89999999987

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.91  E-value=8.1e-11  Score=91.22  Aligned_cols=60  Identities=12%  Similarity=0.245  Sum_probs=51.8

Q ss_pred             cCccccCCccch-hhccCCCCCcccccCCCceeecCCCCcccCCCccchhh-hhhccCCccccc
Q 046965           78 NRMSMMNNNHCH-EENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGH-QNAHKQERAVAK  139 (286)
Q Consensus        78 n~~tc~~~g~S~-~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~H-qr~HtgEKpy~C  139 (286)
                      ..|.|..|+++| ..+..+ ..|+++| +++||.|.+|++.|.....|..| +++|+++..|.+
T Consensus        33 ~~~~C~~C~k~F~~~~~~L-~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           33 GSVSCPTCQAVGRKTIEGL-KKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             SCEECTTTCSCEESSHHHH-HHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             CCcCCCCCCCCcccCHHHH-HHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            356899999999 777654 4899999 99999999999999999999999 999987655544

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.91  E-value=2.5e-10  Score=80.52  Aligned_cols=46  Identities=13%  Similarity=0.242  Sum_probs=42.3

Q ss_pred             ccccCCCceeecCCCCcccCCCccchhhhhh-c-cCCccccccccCcc
Q 046965          100 EKKSSEARVFSCNYCKREFSTSQALGGHQNA-H-KQERAVAKRRQGVD  145 (286)
Q Consensus       100 ~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~-H-tgEKpy~C~~Cgk~  145 (286)
                      +++|++++||.|..|++.|.....|..|++. | +++++|.|..|++.
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~   49 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKE   49 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCE
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCc
Confidence            3789999999999999999999999999998 7 68999999999998

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=4.9e-11  Score=91.68  Aligned_cols=65  Identities=12%  Similarity=0.192  Sum_probs=56.5

Q ss_pred             CccCccccCCccchh-hccCCCCCcccccCC-CceeecCCCCcccCCCccchhhhhhccCCccccccc
Q 046965           76 LFNRMSMMNNNHCHE-ENNGHPTSSEKKSSE-ARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRR  141 (286)
Q Consensus        76 e~n~~tc~~~g~S~~-~~~~~~~~H~rtHtg-eKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~  141 (286)
                      ....|.|..|++.|. .+..+ ..|+++|++ +++|.|.+|++.|.....|..|+++|++++|+....
T Consensus        21 ~~~~~~C~~C~k~f~~~~~~L-~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~~~   87 (98)
T 2gqj_A           21 ERGEAVCPTCNVVTRKTLVGL-KKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDAEA   87 (98)
T ss_dssp             TTSCCCCTTTCCCCSSCSHHH-HHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCCCC
T ss_pred             cCCCcCCCCCCCChhhhHHHH-HHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            345689999999998 66654 589999999 999999999999999999999999999999865543

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.88  E-value=1.1e-10  Score=84.24  Aligned_cols=59  Identities=14%  Similarity=0.222  Sum_probs=52.9

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCc
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      ....|.|..|++.|.....+. .|+++|++++||.|.+|++.|.....|..|+++|+++.
T Consensus        11 ~~k~~~C~~C~k~f~~~~~L~-~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           11 GEKPYGCVECGKAFSRSSILV-QHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TCCCEECSSSCCEESSHHHHH-HHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCccCCCCCCccCCHHHHH-HHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            445689999999999887554 89999999999999999999999999999999998764

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.86  E-value=6.7e-10  Score=70.78  Aligned_cols=38  Identities=45%  Similarity=0.927  Sum_probs=35.5

Q ss_pred             cCCCceeecCCCCcccCCCccchhhhhhccCCcccccc
Q 046965          103 SSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR  140 (286)
Q Consensus       103 HtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~  140 (286)
                      |++++||.|.+|++.|.....|..|+++|++++||.|+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLRL   38 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTTC
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCccceec
Confidence            67899999999999999999999999999999999875

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.85  E-value=1.1e-10  Score=79.87  Aligned_cols=40  Identities=20%  Similarity=0.308  Sum_probs=25.9

Q ss_pred             CceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965          106 ARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       106 eKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ++||.|.+|++.|.....|..|+++|++++||.|..|++.
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   41 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYA   41 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCE
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcch
Confidence            4666777777777776677777767766677777777665

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.85  E-value=2.5e-10  Score=82.03  Aligned_cols=46  Identities=24%  Similarity=0.385  Sum_probs=42.6

Q ss_pred             ccccCCCceeecC--CCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965          100 EKKSSEARVFSCN--YCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       100 ~rtHtgeKpf~C~--~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ..+|+++++|.|+  .|++.|.....|..|+++|+++++|.|..|++.
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   58 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRN   58 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCch
Confidence            3678899999997  599999999999999999999999999999998

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=6.1e-10  Score=81.14  Aligned_cols=44  Identities=20%  Similarity=0.241  Sum_probs=40.7

Q ss_pred             ccCCCceeecCCCCcccCCCccchhhhhhccC---CccccccccCcc
Q 046965          102 KSSEARVFSCNYCKREFSTSQALGGHQNAHKQ---ERAVAKRRQGVD  145 (286)
Q Consensus       102 tHtgeKpf~C~~CgK~F~sssaL~~Hqr~Htg---EKpy~C~~Cgk~  145 (286)
                      +|++++||.|.+|++.|.....|..|+++|++   +++|.|..|++.
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~   47 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKR   47 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCE
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCch
Confidence            47899999999999999999999999999986   899999999998

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.83  E-value=1.3e-10  Score=84.82  Aligned_cols=62  Identities=15%  Similarity=0.260  Sum_probs=56.4

Q ss_pred             ccc--cCCccchhhccCCCCCcccccCCCceeecCC--CCcccCCCccchhhhhhccCCccccccc---cCcc
Q 046965           80 MSM--MNNNHCHEENNGHPTSSEKKSSEARVFSCNY--CKREFSTSQALGGHQNAHKQERAVAKRR---QGVD  145 (286)
Q Consensus        80 ~tc--~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~--CgK~F~sssaL~~Hqr~HtgEKpy~C~~---Cgk~  145 (286)
                      |.|  ..|++.|.....+. .|+++|+++++|.|.+  |++.|.....|..|+++|++   |.|..   |++.
T Consensus         2 ~~C~~~~C~~~f~~~~~l~-~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~   70 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLK-VHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFV   70 (85)
T ss_dssp             EECCSTTCCCEESSHHHHH-HHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCE
T ss_pred             ccCCCCCCCcccCCHHHHH-HHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCc
Confidence            578  89999998877554 8999999999999998  99999999999999999998   99999   9987

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.83  E-value=2.6e-10  Score=78.94  Aligned_cols=54  Identities=13%  Similarity=0.302  Sum_probs=32.4

Q ss_pred             ccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhh-hhccCC
Q 046965           80 MSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQ-NAHKQE  134 (286)
Q Consensus        80 ~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hq-r~HtgE  134 (286)
                      |.|..|++.|.....+. .|+++|++++||.|.+|++.|.....|..|+ ++|+++
T Consensus         3 ~~C~~C~~~f~~~~~l~-~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            3 FVCEVCTRAFARQEHLK-RHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             BCCTTTCCCBSCHHHHH-HHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCCCCccccCCHHHHH-HHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            45666666666554333 5666666666666666666666666666664 456543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=98.82  E-value=7.6e-10  Score=75.60  Aligned_cols=55  Identities=11%  Similarity=0.213  Sum_probs=48.2

Q ss_pred             cCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccC
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQ  133 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~Htg  133 (286)
                      ..|.|..|++.|.....+. .|+++|++++||.|.+|++.|.....|..|+++|.+
T Consensus         3 ~~~~C~~C~~~f~~~~~l~-~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLN-IHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHH-HHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCccCCCCcchhCChHHHH-HHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            3578999999999887654 899999999999999999999999999999998863

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.82  E-value=1.3e-11  Score=98.20  Aligned_cols=62  Identities=16%  Similarity=0.088  Sum_probs=50.1

Q ss_pred             cccCCccchh-----hccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           81 SMMNNNHCHE-----ENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        81 tc~~~g~S~~-----~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      .|..|++.+.     .....+..|+ .|++++||.|.+|++.|.....|..|+++|  ++||.|..|++.
T Consensus        43 ~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~  109 (129)
T 2wbt_A           43 IRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKE  109 (129)
T ss_dssp             HHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCB
T ss_pred             cchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcc
Confidence            4555555555     2233344565 689999999999999999999999999999  899999999998

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.82  E-value=5.6e-10  Score=88.34  Aligned_cols=46  Identities=11%  Similarity=0.185  Sum_probs=42.1

Q ss_pred             ccccCCCceeecCCCCcccCCCccchhhhh-hc---cCCccccccccCcc
Q 046965          100 EKKSSEARVFSCNYCKREFSTSQALGGHQN-AH---KQERAVAKRRQGVD  145 (286)
Q Consensus       100 ~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr-~H---tgEKpy~C~~Cgk~  145 (286)
                      ++..+|++||.|.+|++.|.....|..|++ +|   ++++||.|.+||+.
T Consensus        10 ~~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~   59 (102)
T 2ghf_A           10 QQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFL   59 (102)
T ss_dssp             TTCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEE
T ss_pred             cccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcc
Confidence            356789999999999999999999999998 59   67899999999998

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.1e-09  Score=68.53  Aligned_cols=37  Identities=24%  Similarity=0.547  Sum_probs=34.8

Q ss_pred             ccccCCCceeecCCCCcccCCCccchhhhhhccCCcc
Q 046965          100 EKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERA  136 (286)
Q Consensus       100 ~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKp  136 (286)
                      |++|++++||.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            4789999999999999999999999999999999875

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=98.80  E-value=5e-10  Score=77.47  Aligned_cols=39  Identities=26%  Similarity=0.481  Sum_probs=37.9

Q ss_pred             ceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      +||.|.+|++.|.....|..|+++|+++++|.|..|++.
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   39 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRA   39 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCE
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCc
Confidence            589999999999999999999999999999999999998

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=4e-09  Score=74.83  Aligned_cols=44  Identities=16%  Similarity=0.194  Sum_probs=40.2

Q ss_pred             CCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           95 HPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        95 ~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      .+..|+++|++++||.|.+|++.|.....|..       +++|.|..|++.
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~   48 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKD   48 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHT
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChh
Confidence            34589999999999999999999999999887       789999999987

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.79  E-value=1.9e-09  Score=67.46  Aligned_cols=37  Identities=32%  Similarity=0.534  Sum_probs=34.7

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCC
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQE  134 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgE  134 (286)
                      .|+++|++++||.|.+|++.|.....|..|+++|+++
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            3789999999999999999999999999999999875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.76  E-value=4.8e-10  Score=86.46  Aligned_cols=60  Identities=18%  Similarity=0.195  Sum_probs=54.1

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhh-hccCCcccccc
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQN-AHKQERAVAKR  140 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr-~HtgEKpy~C~  140 (286)
                      .|.|..|++.|.....+ ..|++ |++++||.|.+|++.|.....|..|++ +|+++++|.|.
T Consensus        42 ~~~C~~C~~~f~~~~~l-~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           42 AAVCPYCSLRFFSPELK-QEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             SBCCTTTCCCBSSHHHH-HHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CccCCCCCCccCCHHHH-HHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            47899999999987654 48885 999999999999999999999999997 99999999886

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=98.75  E-value=6.3e-10  Score=76.01  Aligned_cols=38  Identities=16%  Similarity=0.255  Sum_probs=37.0

Q ss_pred             eeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965          108 VFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ||.|..|++.|.....|..|+++|+++++|.|..|++.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   38 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFS   38 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCE
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCch
Confidence            69999999999999999999999999999999999998

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=98.75  E-value=4.3e-10  Score=83.26  Aligned_cols=57  Identities=16%  Similarity=0.332  Sum_probs=50.4

Q ss_pred             cCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCc
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      ..+.|..|++.|.....+ ..|+++|+++++|.|.+|++.|.....|..|+++|++++
T Consensus        33 ~~~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           33 KPFQCRICMRNFSRSDHL-TTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CCEECTTTCCEESCHHHH-HHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CCccCCCCCcccCCHHHH-HHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccC
Confidence            357899999999987755 489999999999999999999999999999999999886

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=1.7e-09  Score=76.89  Aligned_cols=41  Identities=34%  Similarity=0.523  Sum_probs=31.6

Q ss_pred             cCCCceeecCCCCcccCCCccchhhhhhccCCcccccc-ccCcc
Q 046965          103 SSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKR-RQGVD  145 (286)
Q Consensus       103 HtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~-~Cgk~  145 (286)
                      ..+++||.|.+|++.|. ...|..|+++ ++++||+|. +|++.
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~   46 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVG   46 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcc
Confidence            45667788888888888 7778888777 777888887 78776

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.71  E-value=1.3e-09  Score=81.79  Aligned_cols=59  Identities=15%  Similarity=0.249  Sum_probs=53.0

Q ss_pred             cCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccc
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAV  137 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy  137 (286)
                      ..+.|..|++.|.....+ ..|+++|+++++|.|.+|++.|.....|..|+++|+++++.
T Consensus        35 ~~~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p   93 (96)
T 2dmd_A           35 KPYKCKTCDYAAADSSSL-NKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGP   93 (96)
T ss_dssp             CSEECSSSCCEESSHHHH-HHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCCC
T ss_pred             CCEeCCCCCCccCCHHHH-HHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCCC
Confidence            457899999999987754 48999999999999999999999999999999999998753

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=8.3e-10  Score=80.43  Aligned_cols=63  Identities=14%  Similarity=0.317  Sum_probs=53.9

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCC---CceeecCCCCcccCCCccchhhh-hhccCCcccccc
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSE---ARVFSCNYCKREFSTSQALGGHQ-NAHKQERAVAKR  140 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtg---eKpf~C~~CgK~F~sssaL~~Hq-r~HtgEKpy~C~  140 (286)
                      ...|.|..|++.|.....+. .|+++|++   +++|.|.+|++.|.....|..|+ +.|.++++....
T Consensus         5 ~k~~~C~~C~k~f~~~~~L~-~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A            5 SSGLQCEICGFTCRQKASLN-WHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             CCCEECSSSCCEESSHHHHH-HHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             CcCeECCCCCCeeCCHHHHH-HHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            34678999999999887654 89999996   89999999999999999999999 678888775543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.69  E-value=5.4e-09  Score=64.22  Aligned_cols=35  Identities=23%  Similarity=0.387  Sum_probs=32.8

Q ss_pred             ccCCCceeecCCCCcccCCCccchhhhhhccCCcc
Q 046965          102 KSSEARVFSCNYCKREFSTSQALGGHQNAHKQERA  136 (286)
Q Consensus       102 tHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKp  136 (286)
                      +|++++||.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            47899999999999999999999999999999875

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.68  E-value=6.4e-09  Score=64.16  Aligned_cols=35  Identities=29%  Similarity=0.487  Sum_probs=32.9

Q ss_pred             ccCCCceeecCCCCcccCCCccchhhhhhccCCcc
Q 046965          102 KSSEARVFSCNYCKREFSTSQALGGHQNAHKQERA  136 (286)
Q Consensus       102 tHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKp  136 (286)
                      +|++++||.|.+|++.|.....|..|+++|++++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            48899999999999999999999999999999875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.5e-09  Score=77.25  Aligned_cols=57  Identities=11%  Similarity=0.044  Sum_probs=49.8

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecC-CCCcccCCCccchhhhhhccCCcc
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCN-YCKREFSTSQALGGHQNAHKQERA  136 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~-~CgK~F~sssaL~~Hqr~HtgEKp  136 (286)
                      ...+.|..|+++|. ... +..|+++ ++++||.|+ +|++.|.....|..|+++|...++
T Consensus         8 ~~~~~C~~C~k~f~-~~~-L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            8 KRTQPCTYCTKEFV-FDT-IQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCEEECSSSCCEEE-HHH-HHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCeeccccCCccC-HHH-HHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            34578999999999 554 4589999 999999999 999999999999999999987665

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=98.65  E-value=1.4e-09  Score=76.62  Aligned_cols=55  Identities=11%  Similarity=0.259  Sum_probs=48.7

Q ss_pred             cCccccCCccchhhccCCCCCcccc-c-CCCceeecCCCCcccCCCccchhhhhhccC
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKK-S-SEARVFSCNYCKREFSTSQALGGHQNAHKQ  133 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rt-H-tgeKpf~C~~CgK~F~sssaL~~Hqr~Htg  133 (286)
                      ..|.|..|++.|.....+. .|+++ | ++++||.|++|++.|.....|..|+++|.+
T Consensus         9 k~~~C~~C~k~f~~~~~l~-~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            9 HTYRCKVCSRVYTHISNFC-RHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TEEECTTTCCEESSHHHHH-HHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cceECCCCcchhCCHHHHH-HHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            4578999999999887654 88888 7 699999999999999999999999998865

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.64  E-value=1.7e-09  Score=77.55  Aligned_cols=56  Identities=18%  Similarity=0.323  Sum_probs=49.4

Q ss_pred             CccCcccc--CCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhcc
Q 046965           76 LFNRMSMM--NNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus        76 e~n~~tc~--~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      ....|.|.  .|++.|.....+. .|+++|+++++|.|.+|++.|.....|..|+++|+
T Consensus        16 ~~~~~~C~~~~C~k~f~~~~~l~-~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           16 KMRPYACPVESCDRRFSRSDELT-RHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCEECSSTTBCCEESSHHHHH-HHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCccCCcCCCCCCccCCHHHHH-HHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            34567896  7999999887654 89999999999999999999999999999999985

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=1.3e-08  Score=63.70  Aligned_cols=35  Identities=29%  Similarity=0.505  Sum_probs=32.8

Q ss_pred             cccCCCceeecCCCCcccCCC-ccchhhhhhccCCc
Q 046965          101 KKSSEARVFSCNYCKREFSTS-QALGGHQNAHKQER  135 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~ss-saL~~Hqr~HtgEK  135 (286)
                      ++|++++||.|.+|++.|... ..|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            679999999999999999999 99999999999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=98.61  E-value=1.7e-09  Score=78.50  Aligned_cols=55  Identities=15%  Similarity=0.225  Sum_probs=48.9

Q ss_pred             cCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccC
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQ  133 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~Htg  133 (286)
                      ..+.|..|++.|.....+ ..|+++|+++++|.|..|++.|.....|..|+++|+|
T Consensus        28 ~~~~C~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           28 RPYPCQYCGKRFHQKSDM-KKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             CCEECSSSCCEESSHHHH-HHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             CCeeCCcCChhhCCHHHH-HHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            347899999999887754 4899999999999999999999999999999999975

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.60  E-value=6.7e-09  Score=74.41  Aligned_cols=45  Identities=22%  Similarity=0.331  Sum_probs=39.6

Q ss_pred             cccCCCceeecCC--CCcccCCCccchhhhhhccCCccccccc--cCcc
Q 046965          101 KKSSEARVFSCNY--CKREFSTSQALGGHQNAHKQERAVAKRR--QGVD  145 (286)
Q Consensus       101 rtHtgeKpf~C~~--CgK~F~sssaL~~Hqr~HtgEKpy~C~~--Cgk~  145 (286)
                      ..++..++|.|.+  |++.|.....|..|+++|+++++|+|..  |++.
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~   58 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERR   58 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCE
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcc
Confidence            4567788999988  9999999999999999999999999964  9987

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=98.59  E-value=8.5e-09  Score=77.08  Aligned_cols=84  Identities=19%  Similarity=0.243  Sum_probs=63.4

Q ss_pred             CCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcchhhhhhhccC--CCccC-cCCCccCCCCCCC-CccccC
Q 046965          104 SEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQDVGAAAFGN--QHFSF-YSPYYSRFSPYYG-SFNRSL  179 (286)
Q Consensus       104 tgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~~~~~a~~f~~--~H~~~-~~py~s~~~p~~g-s~~r~l  179 (286)
                      +++++|.|.+|++.|.....|..|+++|+++++|.|..|++.+........|  .|... ..||.   |+.|+ .|.+..
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~---C~~C~~~f~~~~   79 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI---CQSCGKGFSRPD   79 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBC---CSSSCCCBSSHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceE---CCCccchhCCHH
Confidence            5789999999999999999999999999999999999999983222211111  12221 13454   88898 677777


Q ss_pred             CCCCCcc-CCCC
Q 046965          180 GVKMNSM-IHKP  190 (286)
Q Consensus       180 gl~~Hs~-iHkp  190 (286)
                      .|+.|.+ +|..
T Consensus        80 ~L~~H~~~~H~~   91 (95)
T 2yt9_A           80 HLNGHIKQVHSG   91 (95)
T ss_dssp             HHHHHHHHTSCC
T ss_pred             HHHHHHHHhcCC
Confidence            7999975 8876

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.59  E-value=1.4e-08  Score=76.27  Aligned_cols=42  Identities=24%  Similarity=0.304  Sum_probs=37.8

Q ss_pred             ccCCCceeecCC--CCcccCCCccchhhh-hhccCCccccccccC
Q 046965          102 KSSEARVFSCNY--CKREFSTSQALGGHQ-NAHKQERAVAKRRQG  143 (286)
Q Consensus       102 tHtgeKpf~C~~--CgK~F~sssaL~~Hq-r~HtgEKpy~C~~Cg  143 (286)
                      .++++|||+|.+  |+|+|.+...|..|+ ++|+++|||-|-+-+
T Consensus        21 ~~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~~~   65 (73)
T 1x3c_A           21 RYSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAEVE   65 (73)
T ss_dssp             SSCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCSCC
T ss_pred             cccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccccc
Confidence            478999999976  999999999999997 689999999997643

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.58  E-value=1.3e-08  Score=62.80  Aligned_cols=33  Identities=24%  Similarity=0.434  Sum_probs=31.1

Q ss_pred             ceeecCCCCcccCCCccchhhhhhccCCccccc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHKQERAVAK  139 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C  139 (286)
                      +||.|.+|++.|.....|..|+++|+++++|.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            589999999999999999999999999999864

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=1.5e-08  Score=63.86  Aligned_cols=35  Identities=20%  Similarity=0.374  Sum_probs=32.6

Q ss_pred             ccccCCCceeecCCCCcccCCCccchhh-hhhccCC
Q 046965          100 EKKSSEARVFSCNYCKREFSTSQALGGH-QNAHKQE  134 (286)
Q Consensus       100 ~rtHtgeKpf~C~~CgK~F~sssaL~~H-qr~HtgE  134 (286)
                      |++|++++||+|.+|++.|.....|..| +++|+++
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            4789999999999999999999999999 9999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=2e-08  Score=62.41  Aligned_cols=35  Identities=20%  Similarity=0.473  Sum_probs=32.6

Q ss_pred             cccCCCceeecCCCCcccCCCccchhhhhhccCCc
Q 046965          101 KKSSEARVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      +.|++++||.|.+|++.|.....|..|+++|+++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elv_A            2 SSGSSGLLYDCHICERKFKNELDRDRHMLVHGDKW   36 (36)
T ss_dssp             CCSCCCCCEECSSSCCEESSHHHHHHHHTTTSTTC
T ss_pred             CCCCCCCCeECCCCCCccCCHHHHHHHHHHhcCCC
Confidence            46889999999999999999999999999999875

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=2.3e-08  Score=62.13  Aligned_cols=35  Identities=26%  Similarity=0.552  Sum_probs=32.6

Q ss_pred             cccCCCceeecCCCCcccCCCccchhhhhhccCCc
Q 046965          101 KKSSEARVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      +.|++++||+|.+|++.|.....|..|+++|+++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elq_A            2 SSGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTEK   36 (36)
T ss_dssp             CSSCCCCSEECSSSSCEESCHHHHHHHHHHSSTTC
T ss_pred             CCCCCCCCccCCCCCchhCCHHHHHHHHHHhccCC
Confidence            56899999999999999999999999999999874

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.54  E-value=1.9e-08  Score=63.21  Aligned_cols=36  Identities=22%  Similarity=0.484  Sum_probs=33.5

Q ss_pred             cCCCceeecC--CCCcccCCCccchhhhhhccCCcccc
Q 046965          103 SSEARVFSCN--YCKREFSTSQALGGHQNAHKQERAVA  138 (286)
Q Consensus       103 HtgeKpf~C~--~CgK~F~sssaL~~Hqr~HtgEKpy~  138 (286)
                      |++++||.|.  .|++.|.....|..|+++|+++++|.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            6789999999  59999999999999999999999874

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=2.7e-08  Score=61.54  Aligned_cols=35  Identities=20%  Similarity=0.405  Sum_probs=32.5

Q ss_pred             cccCCCceeecCCCCcccCCCccchhhhhhccCCc
Q 046965          101 KKSSEARVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      .+|++++||.|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2elt_A            2 SSGSSGKPYKCPQCSYASAIKANLNVHLRKHTGEK   36 (36)
T ss_dssp             CCSCCCCSEECSSSSCEESSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCCCCCCCCCCcccCCHHHHHHHHHHccCCC
Confidence            46889999999999999999999999999999875

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.53  E-value=7.4e-09  Score=74.18  Aligned_cols=55  Identities=18%  Similarity=0.387  Sum_probs=48.4

Q ss_pred             CccCccccC--CccchhhccCCCCCcccccCCCceeecCC--CCcccCCCccchhhhhhc
Q 046965           76 LFNRMSMMN--NNHCHEENNGHPTSSEKKSSEARVFSCNY--CKREFSTSQALGGHQNAH  131 (286)
Q Consensus        76 e~n~~tc~~--~g~S~~~~~~~~~~H~rtHtgeKpf~C~~--CgK~F~sssaL~~Hqr~H  131 (286)
                      ....+.|..  |++.|.....+. .|+++|++++||.|.+  |++.|.....|..|+++|
T Consensus        14 ~~~~~~C~~~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           14 RIRSHICSHPGCGKTYFKSSHLK-AHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCEECSSTTTCCEESSHHHHH-HHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccCceeCCCCCCccccCCHHHHH-HHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            556678987  999999887554 8999999999999975  999999999999999876

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.53  E-value=1.4e-08  Score=73.51  Aligned_cols=42  Identities=26%  Similarity=0.515  Sum_probs=39.7

Q ss_pred             CCCceeecCC--CCcccCCCccchhhhh-hccCCccccccc--cCcc
Q 046965          104 SEARVFSCNY--CKREFSTSQALGGHQN-AHKQERAVAKRR--QGVD  145 (286)
Q Consensus       104 tgeKpf~C~~--CgK~F~sssaL~~Hqr-~HtgEKpy~C~~--Cgk~  145 (286)
                      +++++|.|..  |++.|.....|..|++ +|+++++|.|..  |++.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~   49 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKS   49 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCE
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCc
Confidence            5788999997  9999999999999999 799999999999  9998

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=98.52  E-value=2.2e-08  Score=74.54  Aligned_cols=41  Identities=32%  Similarity=0.498  Sum_probs=39.2

Q ss_pred             CceeecCCCCcccCCCccchhhhhhccCCccccccccCcch
Q 046965          106 ARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVDQ  146 (286)
Q Consensus       106 eKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~~  146 (286)
                      ++||.|.+|++.|.....|..|+++|++++||.|..|++.+
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f   41 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKF   41 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCcc
Confidence            58999999999999999999999999999999999999983

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=4e-08  Score=60.72  Aligned_cols=35  Identities=20%  Similarity=0.518  Sum_probs=32.3

Q ss_pred             cccCCCceeecCCCCcccCCCccchhhhhhccCCc
Q 046965          101 KKSSEARVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      ..|+++++|.|.+|++.|.....|..|+++|++++
T Consensus         2 ~~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            2 SSGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            35889999999999999999999999999999875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=98.48  E-value=1.1e-08  Score=74.24  Aligned_cols=60  Identities=15%  Similarity=0.144  Sum_probs=49.8

Q ss_pred             CccCccccCCccchhhccCCCCCccc-ccCCC-ceeecCCCCcccCCCccchhhhhh-ccCCcc
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEK-KSSEA-RVFSCNYCKREFSTSQALGGHQNA-HKQERA  136 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~r-tHtge-Kpf~C~~CgK~F~sssaL~~Hqr~-HtgEKp  136 (286)
                      ....|.|..|++.|.....+. .|++ .|+++ ++|.|.+|++.|.....|..|+++ |..++|
T Consensus        12 ~~k~~~C~~C~k~f~~~~~L~-~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A           12 GEKPYECYICHARFTQSGTMK-MHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCSEECTTTCCEESCHHHHH-HHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCCCeECCCcCchhCCHHHHH-HHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            345689999999999887654 8886 78875 899999999999999999999997 444554

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.47  E-value=1.8e-09  Score=78.63  Aligned_cols=76  Identities=13%  Similarity=0.078  Sum_probs=54.0

Q ss_pred             eeec--CCCCcccCCCccchhhhhhccCCccccccc--cCcchhhhhhhccCCCccCcCCCccCCCCC---CC-CccccC
Q 046965          108 VFSC--NYCKREFSTSQALGGHQNAHKQERAVAKRR--QGVDQDVGAAAFGNQHFSFYSPYYSRFSPY---YG-SFNRSL  179 (286)
Q Consensus       108 pf~C--~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~--Cgk~~~~~a~~f~~~H~~~~~py~s~~~p~---~g-s~~r~l  179 (286)
                      ||.|  ..|++.|.....|..|+++|+++++|+|..  |++.+......-  .|+..+..|.   |+.   |+ .|.+..
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~--~H~~~h~~~~---C~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLK--RHEKVHAGYP---CKKDDSCSFVGKTWT   75 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHH--HHHHHHHSEE---CCSCSSCCCEESSHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHH--HHHHHhCCCC---CCCCCCCCCccCCHH
Confidence            6999  899999999999999999999999999988  999832222111  1332222233   555   77 455555


Q ss_pred             CCCCCccCC
Q 046965          180 GVKMNSMIH  188 (286)
Q Consensus       180 gl~~Hs~iH  188 (286)
                      .|+.|.++|
T Consensus        76 ~l~~H~~~h   84 (85)
T 2j7j_A           76 LYLKHVAEC   84 (85)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHHhc
Confidence            677777665

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=98.45  E-value=1.3e-08  Score=80.74  Aligned_cols=55  Identities=11%  Similarity=0.130  Sum_probs=49.3

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQE  134 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgE  134 (286)
                      ...|.|..||++|.....+. .|+++|  ++||.|.+|++.|.....|..|+++|++.
T Consensus        72 ~~~~~C~~C~k~f~~~~~l~-~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           72 ISQFVCPLCLMPFSSSVSLK-QHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HCSEECTTTCCEESSHHHHH-HHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCeECCCCCcccCCHhHHH-HHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            35689999999999887654 899999  89999999999999999999999999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=5.8e-08  Score=63.59  Aligned_cols=34  Identities=18%  Similarity=0.313  Sum_probs=31.1

Q ss_pred             ccCCCceeecCC--CCcccCCCccchhhhhhccCCc
Q 046965          102 KSSEARVFSCNY--CKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       102 tHtgeKpf~C~~--CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      .+++++||+|++  |++.|.....|..|+++|+++.
T Consensus         3 ~~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~~   38 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTALD   38 (38)
T ss_dssp             CSSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCCC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            478999999986  9999999999999999999863

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=98.44  E-value=1.4e-08  Score=76.48  Aligned_cols=55  Identities=24%  Similarity=0.401  Sum_probs=48.5

Q ss_pred             cCcccc--CCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccC
Q 046965           78 NRMSMM--NNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQ  133 (286)
Q Consensus        78 n~~tc~--~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~Htg  133 (286)
                      ..+.|.  .|++.|.....+ ..|+++|+++++|.|.+|++.|.....|..|+++|++
T Consensus        44 ~~~~C~~~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           44 KPYKCTWEGCDWRFARSDEL-TRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CCEECCSSSCCCEESSHHHH-HHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCeeCCCCCCCCccCCHHHH-HHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            346885  799999887654 4899999999999999999999999999999999974

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=6.2e-08  Score=60.09  Aligned_cols=34  Identities=29%  Similarity=0.772  Sum_probs=31.6

Q ss_pred             ccCCCceeecCCCCcccCCCccchhhhhhccCCc
Q 046965          102 KSSEARVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       102 tHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      .|++++||.|.+|++.|.....|..|+++|+++|
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   36 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK   36 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCCC
Confidence            5778999999999999999999999999999875

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.42  E-value=8e-08  Score=63.96  Aligned_cols=38  Identities=21%  Similarity=0.451  Sum_probs=34.2

Q ss_pred             CcccccCCCceeecC--CCCcccCCCccchhhhhhccCCc
Q 046965           98 SSEKKSSEARVFSCN--YCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~--~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      .|..+|++++||.|.  .|++.|.....|..|+++|+++|
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            455779999999996  69999999999999999999875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.41  E-value=6e-08  Score=65.08  Aligned_cols=35  Identities=17%  Similarity=0.499  Sum_probs=30.2

Q ss_pred             ccCCCceeecCCCCcccCCCccchhhhh-hccCCcc
Q 046965          102 KSSEARVFSCNYCKREFSTSQALGGHQN-AHKQERA  136 (286)
Q Consensus       102 tHtgeKpf~C~~CgK~F~sssaL~~Hqr-~HtgEKp  136 (286)
                      +|++++||.|.+|++.|.....|..|++ +|+++..
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            5899999999999999999999999999 9998754

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.41  E-value=2.5e-08  Score=61.01  Aligned_cols=32  Identities=28%  Similarity=0.452  Sum_probs=29.5

Q ss_pred             ceeecCCCCcccCCCccchhhhhhccCCcccc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHKQERAVA  138 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~  138 (286)
                      +||.|.+|++.|.....|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   32 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVALG   32 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSCC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCCC
Confidence            58999999999999999999999999999873

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=98.36  E-value=2.4e-08  Score=73.57  Aligned_cols=54  Identities=24%  Similarity=0.328  Sum_probs=47.7

Q ss_pred             cCcccc--CCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhcc
Q 046965           78 NRMSMM--NNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus        78 n~~tc~--~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      ..+.|.  .|++.|.....+ ..|+++|+++++|.|.+|++.|.....|..|+++|.
T Consensus        34 ~~~~C~~~~C~~~f~~~~~l-~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           34 KPYHCDWDGCGWKFARSDEL-TRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHH-HHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             CCcCCCCCCCCCccCCHHHH-HHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            457886  799999887654 489999999999999999999999999999999984

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.33  E-value=1.4e-07  Score=59.33  Aligned_cols=34  Identities=21%  Similarity=0.482  Sum_probs=31.3

Q ss_pred             ccCCCceeecCC--CCcccCCCccchhhhhhccCCc
Q 046965          102 KSSEARVFSCNY--CKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       102 tHtgeKpf~C~~--CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      .|++++||.|.+  |++.|.....|..|+++|+++|
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            478999999995  9999999999999999999875

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.32  E-value=1.3e-07  Score=70.05  Aligned_cols=49  Identities=20%  Similarity=0.259  Sum_probs=45.3

Q ss_pred             CCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965           95 HPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus        95 ~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      .+..|+++|.+++||.|.+|++.|. ...|..|+ .|.+++||.|..|++.
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~   52 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRN   52 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCE
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCc
Confidence            4568999999999999999999995 88999999 8999999999999987

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.31  E-value=1.2e-07  Score=61.51  Aligned_cols=33  Identities=27%  Similarity=0.367  Sum_probs=29.9

Q ss_pred             cCCCceeecCCCCcccCCCccchhhhhhccCCcccccccc
Q 046965          103 SSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQ  142 (286)
Q Consensus       103 HtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~C  142 (286)
                      +.++|||+|++|+|+|.+...|..|+       ||+|.++
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~r   35 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSHR   35 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTTC
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcCC
Confidence            56899999999999999999999998       8888753

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.23  E-value=3.2e-07  Score=53.56  Aligned_cols=30  Identities=27%  Similarity=0.713  Sum_probs=27.9

Q ss_pred             CceeecCCCCcccCCCccchhhhhhccCCc
Q 046965          106 ARVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       106 eKpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            579999999999999999999999999875

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.20  E-value=4.9e-07  Score=52.74  Aligned_cols=29  Identities=28%  Similarity=0.511  Sum_probs=27.1

Q ss_pred             ceeecCCCCcccCCCccchhhhhhccCCc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      +||.|..|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999874

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.20  E-value=1.5e-07  Score=64.24  Aligned_cols=44  Identities=9%  Similarity=-0.005  Sum_probs=38.0

Q ss_pred             CccCccccCCccchhhccCCCCCccc-ccCCCceeecCCCCcccCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEK-KSSEARVFSCNYCKREFST  120 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~r-tHtgeKpf~C~~CgK~F~s  120 (286)
                      ....|.|..|++.|.....+. .|++ +|++++||.|.+|++.|.+
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            9 VGKPYICQSCGKGFSRPDHLN-GHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             SSCCEECSSSCCEESSHHHHH-HHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCeECCCCCcccCCHHHHH-HHHHHhcCCCCCccCCCCCCCCCC
Confidence            345689999999999887654 8987 9999999999999999976

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.46  E-value=2.5e-07  Score=54.34  Aligned_cols=30  Identities=30%  Similarity=0.639  Sum_probs=27.6

Q ss_pred             CceeecCCCCcccCCCccchhhhhhccCCc
Q 046965          106 ARVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       106 eKpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      ++||.|..|++.|.....|..|+++|++++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            478999999999999999999999998764

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.15  E-value=6.1e-07  Score=51.93  Aligned_cols=29  Identities=21%  Similarity=0.505  Sum_probs=27.1

Q ss_pred             ceeecCCCCcccCCCccchhhhhhccCCc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            58999999999999999999999999875

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.14  E-value=8.7e-07  Score=53.20  Aligned_cols=30  Identities=27%  Similarity=0.662  Sum_probs=27.8

Q ss_pred             CceeecC--CCCcccCCCccchhhhhhccCCc
Q 046965          106 ARVFSCN--YCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       106 eKpf~C~--~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      ++||.|.  .|++.|.....|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            5799999  89999999999999999999875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.14  E-value=7.3e-07  Score=65.29  Aligned_cols=42  Identities=19%  Similarity=0.352  Sum_probs=35.3

Q ss_pred             cccCCCceeecCCCCcccCCCccchhhhhhccCCccccccccC
Q 046965          101 KKSSEARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQG  143 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cg  143 (286)
                      ..|.++|||+|.+|+|.|.+...|..|+++|++++. .|..+.
T Consensus         6 ~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~-~~~~~~   47 (66)
T 2epp_A            6 SGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL-QLGYID   47 (66)
T ss_dssp             CSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC-CCCSCC
T ss_pred             CCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc-cccccc
Confidence            567899999999999999999999999999998743 444433

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.12  E-value=6.6e-07  Score=52.05  Aligned_cols=29  Identities=34%  Similarity=0.770  Sum_probs=27.0

Q ss_pred             ceeecCCCCcccCCCccchhhhhhccCCc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            58999999999999999999999999874

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.41  E-value=3.3e-07  Score=53.78  Aligned_cols=29  Identities=24%  Similarity=0.568  Sum_probs=26.9

Q ss_pred             ceeecCCCCcccCCCccchhhhhhccCCc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      +||.|.+|++.|.....|..|+++|+++|
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            58999999999999999999999998874

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.11  E-value=5.7e-07  Score=52.20  Aligned_cols=29  Identities=31%  Similarity=0.602  Sum_probs=27.1

Q ss_pred             ceeecCCCCcccCCCccchhhhhhccCCc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      +||.|.+|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            58999999999999999999999999875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.11  E-value=9.2e-07  Score=51.55  Aligned_cols=30  Identities=20%  Similarity=0.536  Sum_probs=27.6

Q ss_pred             ceeecCCCCcccCCCccchhhhhhccCCcc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHKQERA  136 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~HtgEKp  136 (286)
                      +||.|.+|++.|.....|..|+++|+++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            589999999999999999999999998764

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.07  E-value=4.3e-07  Score=60.24  Aligned_cols=40  Identities=5%  Similarity=-0.056  Sum_probs=35.1

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCCCc
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKR  116 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK  116 (286)
                      ....|.|..|++.|.....+. .|+++|++++||.|.+|+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            9 TRKQVACEICGKIFRDVYHLN-RHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCSEEETTTTEEESSHHHHH-HHGGGSCSCCCCCSCCCCC
T ss_pred             CCcCeeCCCCCcccCCHHHHH-HHHHhcCCCCCccCCCCCC
Confidence            445789999999999887654 8999999999999999986

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.06  E-value=3e-07  Score=68.66  Aligned_cols=39  Identities=26%  Similarity=0.257  Sum_probs=35.6

Q ss_pred             ceeecCCCCcccCCCccchhhhhh-ccCCcc--------ccccccCcc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNA-HKQERA--------VAKRRQGVD  145 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~-HtgEKp--------y~C~~Cgk~  145 (286)
                      ..|.|..|++.|.....|..|+++ |+++++        |.|..|++.
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~   71 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKS   71 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcc
Confidence            457899999999999999999998 999988        899999887

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.04  E-value=1.2e-06  Score=52.34  Aligned_cols=29  Identities=38%  Similarity=0.862  Sum_probs=27.0

Q ss_pred             ceeecC--CCCcccCCCccchhhhhhccCCc
Q 046965          107 RVFSCN--YCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       107 Kpf~C~--~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      +||.|.  .|++.|.....|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            589998  99999999999999999999875

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.03  E-value=1.2e-06  Score=50.87  Aligned_cols=28  Identities=29%  Similarity=0.643  Sum_probs=25.9

Q ss_pred             CceeecCCCCcccCCCccchhhhhhccC
Q 046965          106 ARVFSCNYCKREFSTSQALGGHQNAHKQ  133 (286)
Q Consensus       106 eKpf~C~~CgK~F~sssaL~~Hqr~Htg  133 (286)
                      ++||.|..|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            5799999999999999999999999874

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.03  E-value=1.2e-06  Score=50.67  Aligned_cols=27  Identities=26%  Similarity=0.530  Sum_probs=25.3

Q ss_pred             CceeecCCCCcccCCCccchhhhhhcc
Q 046965          106 ARVFSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       106 eKpf~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            579999999999999999999999985

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.02  E-value=1.7e-06  Score=50.79  Aligned_cols=29  Identities=28%  Similarity=0.652  Sum_probs=26.7

Q ss_pred             ceeecCCCCcccCCCccchhh-hhhccCCc
Q 046965          107 RVFSCNYCKREFSTSQALGGH-QNAHKQER  135 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~H-qr~HtgEK  135 (286)
                      +||.|..|++.|.....|..| +++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCCC
Confidence            589999999999999999999 79999875

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.99  E-value=1.2e-06  Score=51.01  Aligned_cols=27  Identities=19%  Similarity=0.524  Sum_probs=25.1

Q ss_pred             CceeecCCCCcccCCCccchhhhhhcc
Q 046965          106 ARVFSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       106 eKpf~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            479999999999999999999999885

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.95  E-value=2.3e-06  Score=49.07  Aligned_cols=27  Identities=37%  Similarity=0.820  Sum_probs=24.0

Q ss_pred             eeecCCCCcccCCCccchhhhhhccCC
Q 046965          108 VFSCNYCKREFSTSQALGGHQNAHKQE  134 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr~HtgE  134 (286)
                      ||.|.+|++.|.....|..|+++|+++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            689999999999999999999999864

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=97.91  E-value=8.6e-07  Score=62.45  Aligned_cols=48  Identities=8%  Similarity=0.173  Sum_probs=40.4

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhh
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQ  128 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hq  128 (286)
                      ...|.|..||++|.....+.    ++|++++||.|.+|++.|.....+..+.
T Consensus        12 ~k~~~C~~C~k~F~~~~~l~----~~H~~~k~~~C~~C~k~f~~~~~~~~~~   59 (62)
T 1vd4_A           12 RASFKCPVCSSTFTDLEANQ----LFDPMTGTFRCTFCHTEVEEDESAMPKK   59 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHH----HEETTTTEEBCSSSCCBCEECTTCSCCC
T ss_pred             CCCccCCCCCchhccHHHhH----hhcCCCCCEECCCCCCccccCccccccc
Confidence            34689999999999876553    8899999999999999999888776553

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.10  E-value=1.8e-06  Score=49.43  Aligned_cols=26  Identities=27%  Similarity=0.671  Sum_probs=24.2

Q ss_pred             ceeecCCCCcccCCCccchhhhhhcc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      |||.|.+|++.|.....|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            58999999999999999999999884

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.80  E-value=2.5e-06  Score=55.57  Aligned_cols=38  Identities=3%  Similarity=-0.155  Sum_probs=33.0

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|++.|..+..+. .|+++|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            9 GKKPYKCNECGKVFTQNSHLA-RHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCBCTTTCCBCSSHHHHH-HHGGGTSCCCCCSCCCC
T ss_pred             CCcCeECCCCCCeeCCHHHHH-HHhhhcCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999998

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.79  E-value=3e-06  Score=55.21  Aligned_cols=38  Identities=0%  Similarity=-0.172  Sum_probs=33.0

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            9 GEKPFKCGECGKSYNQRVHLT-QHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCSEECTTTCCEESSSHHHH-TTGGGGSSCCSSCSCCC
T ss_pred             CCCCeECCCCCcccCCHHHHH-HHHHHcCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999998

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.78  E-value=3.4e-06  Score=55.06  Aligned_cols=38  Identities=0%  Similarity=-0.161  Sum_probs=33.1

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            9 VEKPYKCEDCGKGYNRRLNLD-MHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSSCBCSSSCCBCSSHHHHH-HHGGGGGSCCCCCSCCC
T ss_pred             CCCCeeCcccCchhCCHHHHH-HHHHhcCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999998

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=97.75  E-value=2.7e-06  Score=55.34  Aligned_cols=37  Identities=0%  Similarity=-0.120  Sum_probs=32.7

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|++.|.....+. .|+++|++++||.|+.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A           10 VKPYGCSQCAKTFSLKSQLI-VHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHH-HHGGGSSSCCCSCCTTC
T ss_pred             CCceECCCCCchhCCHHHHH-HHHHHhCCCCCCCCCCC
Confidence            45689999999999987654 89999999999999988

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.75  E-value=2.9e-06  Score=55.29  Aligned_cols=38  Identities=3%  Similarity=-0.032  Sum_probs=33.0

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            9 GEKPFDCIDCGKAFSDHIGLN-QHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSBCCTTTCCCBSSHHHHH-HHHTTTTTCCCCSSCCC
T ss_pred             CCCCeECCCCCceeCCHHHHH-HHHHHhCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.74  E-value=3.1e-06  Score=55.28  Aligned_cols=38  Identities=3%  Similarity=-0.207  Sum_probs=33.1

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            9 GEKPYGCSECGKAFSSKSYLI-IHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCBCSSSCCBCSCHHHHH-HHHTTTCCSCSSCCCCC
T ss_pred             CCCCcCCCccChhhCChHHHH-HHHHHhCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999998

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=97.74  E-value=3.3e-06  Score=54.98  Aligned_cols=38  Identities=3%  Similarity=-0.092  Sum_probs=32.9

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      +...|.|..|+++|..+..+. .|+++|++++||.|+.|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            9 GEKTWKCRECDMCFSQASSLR-LHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSSCCCCSSHHHHH-HHGGGGSSSSCSCSSCC
T ss_pred             CCcCeECCCCCcccCCHHHHH-HHHHHcCCCCCcCCCCC
Confidence            345689999999999887654 89999999999999988

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.74  E-value=2.6e-06  Score=55.47  Aligned_cols=37  Identities=0%  Similarity=-0.244  Sum_probs=32.7

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A           10 EKPYKCEECGKGFICRRDLY-THHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESCHHHHH-HHGGGGTTCCCSSTTCC
T ss_pred             CcCccCCCccchhCCHHHHH-HHHHHhCCCCCCCCCCC
Confidence            45689999999999887654 89999999999999998

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.73  E-value=2.6e-06  Score=55.48  Aligned_cols=37  Identities=3%  Similarity=-0.109  Sum_probs=32.7

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|.+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A           10 EKPYKCNECGKVFRHNSYLS-RHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSEECSSSCCEESSHHHHH-HHHTTTCCCCCCSCCCC
T ss_pred             CCCeECCCCCchhCChHHHH-HHHhhcCCCCCCCCCCC
Confidence            45689999999999887654 89999999999999998

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.73  E-value=3.3e-06  Score=54.90  Aligned_cols=38  Identities=0%  Similarity=-0.135  Sum_probs=33.0

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      +...|.|..|+++|..+..+. .|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            9 GEKPYKCNECGKAFSQTSKLA-RHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCTTCCTTTCCCCSSHHHHH-HHHTTTTTCSCCCSCCC
T ss_pred             CCcCcCCCCCCCccCCHHHHH-HHHHhcCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999998

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.72  E-value=3e-06  Score=55.30  Aligned_cols=38  Identities=3%  Similarity=-0.119  Sum_probs=33.0

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            9 GGKHFECTECGKAFTRKSTLS-MHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEECSSSCCEESCHHHHH-HHGGGTSCSSCSCCCCC
T ss_pred             CCCCeECCCCCchhCCHHHHH-HHHHHhCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.72  E-value=2.7e-06  Score=55.43  Aligned_cols=38  Identities=3%  Similarity=-0.157  Sum_probs=33.0

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            9 GEKPYKCHECGKVFRRNSHLA-RHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCEECTTTCCEESSHHHHH-HHHTTTCCCCCSCCSCC
T ss_pred             CCCCeECCCCCchhCCHHHHH-HHHHHcCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999998

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.72  E-value=4e-06  Score=54.61  Aligned_cols=38  Identities=0%  Similarity=-0.199  Sum_probs=33.2

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|++.|..+..+. .|+++|++++||.|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            9 GEKPYKCDVCHKSFRYGSSLT-VHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             TCCSEECSSSCCEESSHHHHH-HHHTTTSSSCCCSCCCC
T ss_pred             CCCCeeCcccCcccCChHHHH-HHHHHhCCCCCCCCCCC
Confidence            445689999999999987654 89999999999999998

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=97.72  E-value=4e-06  Score=54.71  Aligned_cols=38  Identities=3%  Similarity=-0.133  Sum_probs=33.1

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            9 GVNPYKCSQCEKSFSGKLRLL-VHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSSCEESSHHHHH-HHHGGGCCSSCCSCCCC
T ss_pred             CCCCeECCCCCcccCCHHHHH-HHHHHcCCCCCCCCCCC
Confidence            445689999999999887654 89999999999999998

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.71  E-value=3.6e-06  Score=54.71  Aligned_cols=37  Identities=3%  Similarity=-0.182  Sum_probs=32.5

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|+.|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A           10 EKPHECRECGKSFSFNSQLI-VHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCSCBCTTTCCBCSSHHHHH-HHHTTTTTSCCSCCCCC
T ss_pred             CCCeeCCCCCchhCCHHHHH-HHHHHcCCCCCCCCCCC
Confidence            34689999999999887654 89999999999999988

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=97.71  E-value=3e-06  Score=55.35  Aligned_cols=38  Identities=3%  Similarity=-0.131  Sum_probs=33.1

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            9 GEKPFKCVECGKGFSRRSALN-VHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSBCCSSSCCCBSSTTHHH-HHHHHHSCCSSCSCCCC
T ss_pred             CCCCcccCccCcccCCHHHHH-HHHHHcCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999998

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.71  E-value=2e-06  Score=55.98  Aligned_cols=38  Identities=5%  Similarity=-0.191  Sum_probs=33.3

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCK  115 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~Cg  115 (286)
                      ...|.|..|++.|..+..+ ..|+++|+++++|.|+.|+
T Consensus         8 ~k~~~C~~C~k~f~~~~~l-~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            8 EKPYSCPVCGLRFKRKDRM-SYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSEETTTTEECSCHHHH-HHHHHHHSCCCCCCCCCCC
T ss_pred             CCCCcCCCCCcccCCHHHH-HHHHHHccCCCCCCCcCCC
Confidence            3568999999999988755 4899999999999999996

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.71  E-value=2.7e-06  Score=55.31  Aligned_cols=37  Identities=3%  Similarity=-0.068  Sum_probs=32.7

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|++|
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A           10 EKPYKCNECGKVFTQNSHLA-NHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSEETTTTEECSSHHHHH-HHHGGGSCCCSCSSCCC
T ss_pred             CCCeECCCcChhhCCHHHHH-HHHHHcCCCCCCCCCCC
Confidence            45689999999999887654 89999999999999998

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.70  E-value=2.9e-06  Score=55.17  Aligned_cols=37  Identities=0%  Similarity=-0.233  Sum_probs=32.5

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|.....+. .|+++|++++||+|..|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A           10 EKSHTCDECGKNFCYISALR-IHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CSSEECTTTCCEESSHHHHH-HHHTTTCCSCSSCCSCC
T ss_pred             CCCeECCCcCcccCCHHHHH-HHHHHhCCCCCCCCCCC
Confidence            45689999999999887654 89999999999999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.70  E-value=3.1e-06  Score=55.12  Aligned_cols=38  Identities=3%  Similarity=-0.159  Sum_probs=33.0

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            9 GEKPYECSVCGKAFSHRQSLS-VHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHH-HHHGGGSSCCCSCSSCC
T ss_pred             CCCCeeCCCcCCccCCHHHHH-HHHHHhcCCCCCCCCCC
Confidence            345689999999999887654 89999999999999998

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=97.69  E-value=3.5e-06  Score=54.76  Aligned_cols=38  Identities=3%  Similarity=-0.200  Sum_probs=33.0

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|+++|.....+. .|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            9 GEKPYNCKECGKSFRWASCLL-KHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHH-HHGGGGTSCCCCSTTCC
T ss_pred             CCcCeECCccccccCChHHHH-HHHHHhCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999998

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.69  E-value=2.9e-06  Score=55.12  Aligned_cols=37  Identities=5%  Similarity=-0.140  Sum_probs=32.6

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|.+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A           10 EKLYNCKECGKSFSRAPCLL-KHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCBTTTTBCCSCHHHHH-HHHHHCCSSSCCCCCCC
T ss_pred             CCCeECCCCCCccCchHHHH-HHHHhcCCCCCCCCCCC
Confidence            34689999999999887654 89999999999999998

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.67  E-value=3.4e-06  Score=54.95  Aligned_cols=37  Identities=0%  Similarity=-0.229  Sum_probs=32.6

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|++|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A           10 EKPFKCDICGKSFCGRSRLN-RHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SCSCCCSSSCCCCSSHHHHH-HHHHHTTCCCSSSCCCC
T ss_pred             CCCcCCCcCCchhCCHHHHH-HHHHHcCCCCCCCCCCC
Confidence            35689999999999887654 89999999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=97.67  E-value=3.3e-06  Score=55.02  Aligned_cols=38  Identities=8%  Similarity=-0.063  Sum_probs=33.0

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|++.|..+..+. .|+++|++++||.|+.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            9 GEKRYKCNECGKVFSRNSQLS-QHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             TSCCEECSSSCCEESSHHHHH-HHHTGGGCCCCCSSSCC
T ss_pred             CCcCcCCCCCcchhCCHHHHH-HHHHhcCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999988

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=97.67  E-value=2.6e-06  Score=57.84  Aligned_cols=31  Identities=3%  Similarity=-0.097  Sum_probs=29.2

Q ss_pred             CcccCCCccchhhhhhccCCccccccccCcc
Q 046965          115 KREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       115 gK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      +|.|.+...|..|+++|+++++|.|..|++.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~   33 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAV   33 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCE
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcc
Confidence            4789999999999999999999999999998

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.67  E-value=3e-06  Score=55.07  Aligned_cols=37  Identities=0%  Similarity=-0.182  Sum_probs=32.6

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..||++|..+..+. .|+++|++++||.|.+|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A           10 EKPCKCTECGKAFCWKSQLI-MHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSSHHHH-HHHHHCCSCCCSCCCCC
T ss_pred             CCCeeCCCCCCccCCHHHHH-HHHHHhCCCCCCCCCCC
Confidence            35689999999999887654 89999999999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.66  E-value=3.7e-06  Score=54.87  Aligned_cols=37  Identities=0%  Similarity=-0.151  Sum_probs=32.6

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|.....+. .|+++|++++||.|.+|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A           10 TKSHQCHECGRGFTLKSHLN-QHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSEECSSSCCEESSHHHHH-HHHTTTSCSCCSSCCCC
T ss_pred             CCCeECCcCCCccCCHHHHH-HHHHHhCCCCCCCCCCC
Confidence            45689999999999887654 89999999999999998

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.66  E-value=3.1e-06  Score=55.16  Aligned_cols=38  Identities=5%  Similarity=-0.194  Sum_probs=33.0

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            9 GEKPYKCEKCGKGYNSKFNLD-MHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             SCCSEEETTTTEEESCHHHHH-HHHTTSCSCCSSCCSCC
T ss_pred             CCCCeECCCCCCccCCHHHHH-HHHHhhCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999998

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.66  E-value=3.3e-06  Score=54.98  Aligned_cols=37  Identities=0%  Similarity=-0.162  Sum_probs=32.6

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A           10 EKPYECSICGKSFTKKSQLH-VHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHH-HHHHTTSSCCSCCSCCC
T ss_pred             CcCcCCCCCCcccCCHHHHH-HHHHHhCCCCCCCCCCC
Confidence            45689999999999887654 89999999999999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=97.66  E-value=3.2e-06  Score=55.16  Aligned_cols=37  Identities=0%  Similarity=-0.116  Sum_probs=32.7

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|++.|..+..+. .|+++|++++||.|+.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A           10 EKPYECKECGKAFSQTTHLI-QHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSCBCSSSCCBCSCHHHHH-HHHHHHSSCCCSSCCCC
T ss_pred             CCceECCCCCchhCCHHHHH-HHHHHcCCCCCCCCCCC
Confidence            45689999999999987654 89999999999999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.64  E-value=3.7e-06  Score=54.62  Aligned_cols=37  Identities=5%  Similarity=-0.147  Sum_probs=32.5

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|.+|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A           10 EKPYKCSDCGKSFTWKSRLR-IHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCSCBCSSSCCBCSSHHHHH-HHHHHHSCCSSCCSCCC
T ss_pred             CCCccCCccChhhCCHHHHH-HHHHhcCCCCCCCCCCC
Confidence            35689999999999887654 89999999999999998

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.63  E-value=3.2e-06  Score=55.18  Aligned_cols=38  Identities=0%  Similarity=-0.231  Sum_probs=33.2

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|++.|.....+. .|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            9 GEKPYQCSECGKSFSGSYRLT-QHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCSSSCCCCSSHHHHH-HHHTHHHHCCCCSCCCC
T ss_pred             CCCCeeCCCCCcccCCHHHHH-HHHHHcCCCCCCCCCCC
Confidence            445689999999999887654 89999999999999998

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.63  E-value=4.5e-06  Score=54.22  Aligned_cols=37  Identities=0%  Similarity=-0.209  Sum_probs=32.5

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|++.|.....+. .|+++|++++||.|.+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A           10 EKPYVCDYCGKAFGLSAELV-RHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHH-HHHGGGCCCSCCSSCCC
T ss_pred             CCCeECCCCChhhCCHHHHH-HHHHhcCCCCCCCCCCC
Confidence            34689999999999887654 89999999999999998

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.62  E-value=1.3e-06  Score=66.80  Aligned_cols=53  Identities=8%  Similarity=-0.100  Sum_probs=44.0

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQ  133 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~Htg  133 (286)
                      ....|.|..|+++|.....+. .|+++|++++||+|..|.    ....|..|+++|.+
T Consensus        22 ~~kpy~C~~C~k~F~~~~~L~-~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           22 QNSTYQCKHCDSKLQSTAELT-SHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCSCEECSSSCCEESSHHHHH-HHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             CCCCCcCCCCCCEeCCHHHHH-HHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            345689999999999887654 899999999999998765    46778888888876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.62  E-value=2.8e-06  Score=55.33  Aligned_cols=38  Identities=3%  Similarity=-0.119  Sum_probs=32.9

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            9 GEKPYKCNECGKVFTQNSHLA-RHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCSSEECSSSCCEESSSHHHH-HHTHHHHSCCCSCSCCC
T ss_pred             CCCCeECCcCCchhCCHHHHH-HHHHhcCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999998

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.62  E-value=8.3e-06  Score=53.04  Aligned_cols=38  Identities=3%  Similarity=-0.152  Sum_probs=33.0

Q ss_pred             CccCccccCCccchhhccCCCCCccc-ccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEK-KSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~r-tHtgeKpf~C~~C  114 (286)
                      ....|.|..|++.|..+..+. .|++ +|++++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~-~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            9 GKKPYECIECGKAFIQNTSLI-RHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCSBCCSSSCCCBSSHHHHH-HHHTTTTTTSCSSSCCCC
T ss_pred             CCCCEECCccCchhCChHHHH-HHhHhhcCCCCCCCCCCC
Confidence            345689999999999887654 8999 9999999999988

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.62  E-value=4.9e-06  Score=54.17  Aligned_cols=37  Identities=3%  Similarity=-0.087  Sum_probs=32.4

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A           10 EKPYRCAECGKAFTDRSNLF-THQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHH-HHHTTTTTSCCCCTTCC
T ss_pred             CCCeECCCCCchhCCHHHHH-HHHHHcCCCCCCCCCCC
Confidence            45689999999999887654 89999999999999986

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.62  E-value=4.7e-06  Score=54.26  Aligned_cols=38  Identities=8%  Similarity=-0.129  Sum_probs=32.9

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      +...|.|..|+++|.....+. .|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            9 GEKPFKCEECGKGFYTNSQCY-SHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHH-HHHHHSCCSSCCSSCCC
T ss_pred             CCCCcCCCCCCCcCCChHHHH-HHHHHhCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999998

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.61  E-value=1.3e-05  Score=46.24  Aligned_cols=27  Identities=30%  Similarity=0.706  Sum_probs=25.1

Q ss_pred             ceeecC--CCCcccCCCccchhhhhhccC
Q 046965          107 RVFSCN--YCKREFSTSQALGGHQNAHKQ  133 (286)
Q Consensus       107 Kpf~C~--~CgK~F~sssaL~~Hqr~Htg  133 (286)
                      +||.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            589999  999999999999999999974

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.61  E-value=3e-06  Score=55.17  Aligned_cols=38  Identities=3%  Similarity=-0.160  Sum_probs=32.9

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      +...|.|..|+++|..+..+. .|+++|++++||.|++|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            9 GEKPYKCNECGKVFTQNSHLT-NHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCSEECSSSCCEESSHHHHH-HHHHHHSSSSCSSCCCC
T ss_pred             CCCCEeCCcCCCccCCHHHHH-HHHHHHCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.61  E-value=4.5e-06  Score=54.32  Aligned_cols=37  Identities=5%  Similarity=-0.065  Sum_probs=32.5

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|.+|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A           10 EKPFKCEECGKRFTQNSQLH-SHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEEETTTTEEESSHHHHH-HHGGGGSCCCCSCCCCC
T ss_pred             CCCeeCCCCCcccCCHHHHH-HHHHHcCCCCCCCCCCC
Confidence            34689999999999887654 89999999999999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.61  E-value=3.2e-06  Score=55.03  Aligned_cols=37  Identities=3%  Similarity=-0.122  Sum_probs=32.5

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|+.|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A           10 EKPYKCSECGKAFHRHTHLN-EHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHH-HHHHHHTCCCSSCSSCC
T ss_pred             CcCeECCCCCCeeCChHHHH-HHHHHcCCCCCCCCCCC
Confidence            35689999999999887654 89999999999999988

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.61  E-value=3.2e-06  Score=55.05  Aligned_cols=37  Identities=5%  Similarity=-0.080  Sum_probs=32.6

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|+.|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A           10 ENPYECHECGKAFSRKYQLI-SHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             SCCEECSSSCCEESSHHHHH-HHHHHHTTSCCSCSSCC
T ss_pred             CcCcCCCCCCcccCcHHHHH-HHHHHcCCCCCCCCCCC
Confidence            45689999999999887654 89999999999999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.60  E-value=3.3e-06  Score=54.98  Aligned_cols=37  Identities=0%  Similarity=-0.275  Sum_probs=32.5

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|.....+. .|+++|++++||+|.+|
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A           10 EKSHQCRECGEIFFQYVSLI-EHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCCEECTTTCCEESSHHHHH-HHHHHHSCCSCCCTTCC
T ss_pred             CCCEEccccChhhCCHHHHH-HHHHHhCCCCCCCCCCC
Confidence            35689999999999887654 89999999999999988

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.60  E-value=3e-06  Score=55.05  Aligned_cols=37  Identities=0%  Similarity=-0.175  Sum_probs=32.7

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|++.|..+..+. .|+++|++++||.|.+|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A           10 ERPHKCNECGKSFIQSAHLI-QHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHH-HHHHHHSCCCTTSSSCC
T ss_pred             CCCeeCCCCChhhCCHHHHH-HHHHHhCCCCCCCCCCC
Confidence            45689999999999987654 89999999999999998

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.60  E-value=3.4e-06  Score=55.02  Aligned_cols=38  Identities=0%  Similarity=-0.160  Sum_probs=33.1

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|+++|..+..+ ..|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L-~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            9 GEKPYKCVECGKGYKRRLDL-DFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHH-HHHHHHHHCCCCCCSCCC
T ss_pred             CCCCeECcccCchhCCHHHH-HHHHHHHcCCCCCCCCCC
Confidence            44568999999999988755 489999999999999998

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.59  E-value=3.3e-06  Score=54.49  Aligned_cols=37  Identities=3%  Similarity=-0.115  Sum_probs=32.6

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|.+|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            8 EKPFGCSCCEKAFSSKSYLL-VHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCEECSSSSCEESSHHHHH-HHHHHHTSSCSCSCCCC
T ss_pred             CcCccCCCCCcccCCHHHHH-HHHHHhCCCCCCCCCCC
Confidence            34689999999999988654 89999999999999988

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.58  E-value=3e-06  Score=55.23  Aligned_cols=38  Identities=0%  Similarity=-0.136  Sum_probs=33.0

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      +...|.|..|+++|.....+. .|+++|++++||.|.+|
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            9 GEKPYGCNECGKTFSQKSILS-AHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCEEETTTTEEESSHHHHH-HHHHHHSSCCCSSSCCC
T ss_pred             CCcCeECCCCCcccCchHHHH-HHHHHcCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999998

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.58  E-value=3.6e-06  Score=55.05  Aligned_cols=38  Identities=8%  Similarity=-0.013  Sum_probs=32.9

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|++.|.....+. .|+++|++++||.|++|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            9 GEKPYKCMECGKAFGDNSSCT-QHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCSSSBTTTTBCCSSHHHHH-HHHHHHHSCCCCCCCCC
T ss_pred             CCCCcCCCCCCchhCCHHHHH-HHHHHcCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999998

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.58  E-value=4.6e-06  Score=54.28  Aligned_cols=37  Identities=3%  Similarity=-0.136  Sum_probs=32.5

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|.....+. .|+++|++++||.|++|
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A           10 EKPYICAECGKAFTIRSNLI-KHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHH-HHHHHTSCCCCSSCSCC
T ss_pred             CcCeECCCCChhhCCHHHHH-HHHHHcCCCCCCCCCCC
Confidence            35689999999999887654 89999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.58  E-value=2.9e-06  Score=55.26  Aligned_cols=38  Identities=0%  Similarity=-0.173  Sum_probs=33.0

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|+++|.....+. .|+++|++++||.|.+|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            9 GVKPYMCNECGKAFSVYSSLT-THQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESCHHHHH-HHHHHHHCCSCCSCCCC
T ss_pred             CCcCeECCCCCchhCCHHHHH-HHHHHcCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.55  E-value=3e-06  Score=55.19  Aligned_cols=37  Identities=3%  Similarity=-0.135  Sum_probs=32.7

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|++|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A           10 ERPYICTVCGKAFTDRSNLI-KHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHH-HHHHHHHCSSCSSSCCC
T ss_pred             CCCcCCCCCCchhCCHHHHH-HHHHhcCCCCCCCCCCC
Confidence            35689999999999987654 89999999999999988

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.53  E-value=1.1e-05  Score=52.65  Aligned_cols=38  Identities=3%  Similarity=-0.105  Sum_probs=32.6

Q ss_pred             CccCcccc--CCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMM--NNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~--~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|.  .|++.|..+..+ ..|+++|++++||+|.+|
T Consensus         9 ~~k~~~C~~~~C~k~f~~~~~L-~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            9 GEKPFACTWPGCGWRFSRSDEL-SRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCCEECCSSSCCCEESSHHHH-HHHHTTSCCCCSCSSCCC
T ss_pred             CCCCeECCCCCCCCccCCHHHH-HHHHHHhCCCCCCCCCCC
Confidence            34568898  899999988755 489999999999999988

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.51  E-value=4.8e-06  Score=61.40  Aligned_cols=56  Identities=16%  Similarity=0.118  Sum_probs=46.6

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhccCCc
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      ....+.|..|+++|...  .+..|+ .|.+++||.|..|++.|. ...|..|+++|++++
T Consensus        14 ~~r~~~C~~C~~~~~~~--~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           14 PLRLAVCQHCDLELSIL--KLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCEECSSSCCEECHH--HHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             CCcccCCcccChHhhHH--HHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            34567899999999633  345898 899999999999999988 489999999998764

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.51  E-value=3.8e-06  Score=54.79  Aligned_cols=37  Identities=3%  Similarity=-0.174  Sum_probs=32.7

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|..||++|.....+. .|+++|++++||.|..|
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A           10 ERPYGCNECGKNFGRHSHLI-EHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHH-HHHHHHHSTTSSCCSCC
T ss_pred             CCCEEccccCcccCCHHHHH-HHHHHHcCCCCCCCCCC
Confidence            35689999999999988654 89999999999999988

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.41  E-value=8.4e-06  Score=53.12  Aligned_cols=38  Identities=5%  Similarity=-0.135  Sum_probs=32.6

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ....|.|..|++.|..+..+. .|+++|++++||.|+.|
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            9 GEKPFKCKECGKAFRQNIHLA-SHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHH-HHHHHHCCCCSSCSSCC
T ss_pred             CCCCEECCcCCchhCCHHHHH-HHHHHhCCCCCCCCCCC
Confidence            345689999999999887654 89999999999999876

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.35  E-value=2.2e-05  Score=50.93  Aligned_cols=37  Identities=3%  Similarity=-0.165  Sum_probs=31.5

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|++
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            9 GEKPYKCNECGKVFTQNSHLV-RHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCBCSSSCCBCSSHHHHH-HHHTTTTTSSCCCCSC
T ss_pred             CCcCeECCCCCcccCCHHHHH-HHHHhhCCCCCCCCCC
Confidence            345689999999999887654 8999999999999975

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.33  E-value=2.3e-05  Score=50.83  Aligned_cols=37  Identities=8%  Similarity=-0.111  Sum_probs=31.5

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|++.|..+..+. .|+++|++++||.|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            9 GENPFICSECGKVFTHKTNLI-IHQKIHTGERPSGPSS   45 (46)
T ss_dssp             SCCSCBCTTTCCBCSSHHHHH-HHHTTTSCCCCSCSCC
T ss_pred             CCCCEECCccCcccCCHHHHH-HHHHHhCCCCCCCCCC
Confidence            345689999999999887654 8999999999999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.32  E-value=2.6e-05  Score=50.84  Aligned_cols=37  Identities=5%  Similarity=-0.190  Sum_probs=31.6

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            9 GEKPYKCQVCGKAFRVSSHLV-QHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SCCSCBCSSSCCBCSSHHHHH-HHTTTTTSCCSCTTSC
T ss_pred             CCcccCCCCCCcccCcHHHHH-HHHHhcCCCCCCCCCC
Confidence            345689999999999887654 8999999999999974

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.32  E-value=2.4e-05  Score=50.86  Aligned_cols=37  Identities=0%  Similarity=-0.183  Sum_probs=31.5

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            9 GEKCYKCDVCGKEFSQSSHLQ-THQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHH-HHHTTTSSSCCCCTTC
T ss_pred             CCCCeECCCCCcccCCHHHHH-HHHHHcCCCCCCCCCC
Confidence            345689999999999887654 8999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.31  E-value=2.8e-05  Score=50.43  Aligned_cols=37  Identities=0%  Similarity=-0.128  Sum_probs=31.5

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            9 GGKPYQCNECGKAFSQTSKLA-RHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSCSSSCCSSCCCCSSHHHHH-HHGGGGCCCCCCCCCC
T ss_pred             CCCCeECCCCCcccCCHHHHH-HHHHHcCCCCCCCCCC
Confidence            345689999999999887654 8999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.30  E-value=2.4e-05  Score=50.73  Aligned_cols=36  Identities=3%  Similarity=-0.110  Sum_probs=31.0

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ...|.|..|++.|..+..+. .|+++|++++||.|++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A           10 EKPYKCNECGKVFTQNSHLA-RHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCTTCCSSSCCCCSSHHHHH-HHHTTTSCSCCSSTTC
T ss_pred             CcCeECCCCCcccCChhHHH-HHhHhcCCCCCCCCCC
Confidence            45689999999999887654 8999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.29  E-value=2.5e-05  Score=50.53  Aligned_cols=36  Identities=0%  Similarity=-0.137  Sum_probs=31.1

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|+.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A           10 EKPYECSDCGKSFIKKSQLH-VHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCSSCCSSSCCCCSSHHHHH-HHHGGGSSSCCCSSSC
T ss_pred             CCCcCCCCCCchhCCHHHHH-HHHHHhCCCCCCCCCC
Confidence            45689999999999887654 8999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.28  E-value=2.4e-05  Score=50.65  Aligned_cols=37  Identities=0%  Similarity=-0.190  Sum_probs=31.5

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            9 GEKPYICNECGKSFIQKSHLN-RHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCSEECSSSCCEESSHHHHH-HHGGGTSSCCSSCCCC
T ss_pred             CCcCEECCCCChhhCChHHHH-HHHHhcCCCCCcCCCC
Confidence            345689999999999887654 8999999999999974

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.26  E-value=2.8e-05  Score=50.29  Aligned_cols=37  Identities=0%  Similarity=-0.088  Sum_probs=31.6

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|++.|.....+. .|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            9 GQKPFECTHCGKSFRAKGNLV-THQRIHTGEKSGPSSG   45 (45)
T ss_dssp             SCCSEEETTTTEEESSHHHHH-HHHTTTSSCCCCCSCC
T ss_pred             CCcCccCCCCCCccCChHHHH-HHHHHhCCCCCCCCCC
Confidence            445689999999999887654 8999999999999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.26  E-value=3.8e-05  Score=49.92  Aligned_cols=37  Identities=3%  Similarity=-0.147  Sum_probs=31.4

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|++.|..+..+. .|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            9 GEKPYECDVCRKAFSHHASLT-QHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSSSCBCTTTCCBCSSSHHHH-HHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCcCchhCCHHHHH-HHHHHhCCCCCCCCCC
Confidence            345689999999999887654 8999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.26  E-value=3.2e-05  Score=50.24  Aligned_cols=36  Identities=6%  Similarity=-0.051  Sum_probs=31.1

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ...|.|..|++.|.....+. .|+++|++++||.|+.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A           10 EKPFQCEECGKRFTQNSHLH-SHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSSBCCSSSCCCBSSHHHHH-HHGGGGTTCCCSSCCC
T ss_pred             CcCCCCCCCCcccCCHHHHH-HHHHhcCCCCCCCCCC
Confidence            45689999999999887654 8999999999999974

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.26  E-value=4.5e-05  Score=48.26  Aligned_cols=34  Identities=3%  Similarity=-0.131  Sum_probs=29.6

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeec
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSC  111 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C  111 (286)
                      ...|.|..|+++|..+..+ ..|+++|++++||.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L-~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            9 EKPYRCDQCGKAFSQKGSL-IVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCSBCCTTTTCCBSSHHHH-HTTGGGTSCCSCCCC
T ss_pred             CCCeeCCCccchhCCHHHH-HHHHHHhCCCCCCCC
Confidence            4568999999999988765 489999999999998

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=97.25  E-value=2.4e-05  Score=50.40  Aligned_cols=37  Identities=3%  Similarity=-0.159  Sum_probs=31.4

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|++.|..+..+. .|+++|++++||.|++
T Consensus         7 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            7 GNGAFFCNECDCRFSEEASLK-RHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SSCCBCCSSSCCCBSSHHHHH-HHHHHHTCTTCSSSCC
T ss_pred             CCCCEECCCCCCeeCChHHHH-HHHHhhCCCCCccCCC
Confidence            345689999999999887654 8999999999999974

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.25  E-value=2.9e-05  Score=50.62  Aligned_cols=37  Identities=0%  Similarity=-0.170  Sum_probs=31.5

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|++.|..+..+. .|+++|++++||.|..
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            9 GERGHRCSDCGKFFLQASNFI-QHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCSSSCCCCSSHHHHH-HHHHHHSSCCCSSCCC
T ss_pred             CCCCcCCCCCCCeeCChHHHH-HHHHHhCCCCCCCCCC
Confidence            345689999999999887654 8999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.25  E-value=2.5e-05  Score=50.75  Aligned_cols=37  Identities=0%  Similarity=-0.151  Sum_probs=31.5

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|++.|..+..+. .|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            9 GERHYECSECGKAFARKSTLI-MHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECSSSCCEESSHHHHH-HHHTTTSCCCCCSSCC
T ss_pred             CCCCeECCcCCcccCCHHHHH-HHHHHhCCCCCCCCCC
Confidence            345689999999999887654 8999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.23  E-value=2.2e-05  Score=50.82  Aligned_cols=37  Identities=0%  Similarity=-0.101  Sum_probs=31.6

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            9 GEKPFECSECQKAFNTKSNLI-VHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSEECSSSCCEESSHHHHH-HHHHTSCSSSSSCCCC
T ss_pred             CCCCcCCCCCCcccCCHHHHH-HHHHHhCCCCCCCCCC
Confidence            345689999999999887654 8999999999999975

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.23  E-value=3.1e-05  Score=50.21  Aligned_cols=36  Identities=0%  Similarity=-0.104  Sum_probs=31.0

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|+.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A           10 EKPYKCNECGKAFRAHSNLT-THQVIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCTTTTCCCSSHHHHH-HHHTTTCCSCCSSCCC
T ss_pred             CCCeECCcCChhhCCHHHHH-HHHHHhCCCCCCCCCC
Confidence            45689999999999887654 8999999999999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.20  E-value=1.9e-05  Score=51.36  Aligned_cols=37  Identities=0%  Similarity=-0.076  Sum_probs=31.6

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|++.|.....+. .|+++|++++||+|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            9 GQRPYECIECGKAFKTKSSLI-CHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSEECSSSCCEESSHHHHH-HHHHHHSSSSCCCCCC
T ss_pred             CCcCcCCCCCCCccCCHHHHH-HHHHhcCCCCCCCCCC
Confidence            345689999999999887654 8999999999999974

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.20  E-value=3.1e-05  Score=49.95  Aligned_cols=21  Identities=14%  Similarity=0.178  Sum_probs=19.4

Q ss_pred             hhhhhhccCCccccccccCcc
Q 046965          125 GGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       125 ~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      +.|+++|++++||+|.+|++.
T Consensus         1 ~~H~~~H~~~k~~~C~~C~k~   21 (44)
T 2epv_A            1 GSSGSSGSGEKPYECNECGKA   21 (44)
T ss_dssp             CCCCCCCCCCCSEECSSSCCE
T ss_pred             CCCCcccCCCcCeECCCCCcc
Confidence            368999999999999999998

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.19  E-value=0.00016  Score=43.49  Aligned_cols=30  Identities=3%  Similarity=-0.098  Sum_probs=26.6

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCcee
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEARVF  109 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf  109 (286)
                      .+.|..||++|.....+. .|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~-~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALS-KHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTS-SSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHH-HHHHHHccCCCC
Confidence            478999999999988665 899999999987

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.19  E-value=3e-05  Score=50.15  Aligned_cols=36  Identities=0%  Similarity=-0.093  Sum_probs=31.0

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|+.
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A           10 EKPYRCGECGKAFAQKANLT-QHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHH-HHHTTTSSCCSSCSCC
T ss_pred             CCCeECCCCCCccCCHHHHH-HHHHHcCCCCCCCCCC
Confidence            45689999999999887654 8999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=97.18  E-value=3e-05  Score=49.17  Aligned_cols=35  Identities=9%  Similarity=-0.016  Sum_probs=30.2

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCN  112 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~  112 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|.
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            8 ENPYECSECGKAFNRKDQLI-SHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSEECSSSCCEESSHHHHH-HHHGGGCCCCSCCCC
T ss_pred             CCCccCCCcChhhCCHHHHH-HHHHhcCCCCCCCCC
Confidence            45689999999999887654 899999999999985

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.18  E-value=3.1e-05  Score=50.33  Aligned_cols=36  Identities=3%  Similarity=-0.127  Sum_probs=30.9

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ...|.|..|+++|.....+. .|+++|++++||.|+.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A           10 KKPYECKECRKTFIQIGHLN-QHKRVHTGERSSGPSS   45 (46)
T ss_dssp             SCSCCCSSSCCCCSSHHHHH-HHHHHCSSCCSCSTTC
T ss_pred             CCCcCCCCcCchhCCHHHHH-HHHHHhCCCCCCCCCC
Confidence            45689999999999887654 8999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.17  E-value=3.5e-05  Score=48.75  Aligned_cols=34  Identities=6%  Similarity=-0.057  Sum_probs=29.5

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeec
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSC  111 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C  111 (286)
                      ...|.|..|+++|.....+. .|+++|++++||.|
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C   41 (41)
T 2ept_A            8 QRVYECQECGKSFRQKGSLT-LHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCEECSSSCCEESSHHHHH-HHGGGCCCCSCSCC
T ss_pred             CCCeECCCCCCCcCCHHHHH-HHHHHhCCCCCcCC
Confidence            45689999999999887654 89999999999998

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.16  E-value=2.8e-05  Score=50.56  Aligned_cols=37  Identities=0%  Similarity=-0.111  Sum_probs=31.5

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            9 GKKLFKCNECKKTFTQSSSLT-VHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSCCCBCTTTCCBCSSHHHHH-HHHHHHTSSCCCSCCC
T ss_pred             CCCCEECCccCcccCCHHHHH-HHHHHcCCCCCCCCCC
Confidence            345689999999999887654 8999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.15  E-value=3.4e-05  Score=50.00  Aligned_cols=36  Identities=0%  Similarity=-0.116  Sum_probs=30.9

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ...|.|..|+++|.....+. .|+++|++++||.|+.
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A           10 ERHYECSECGKAFIQKSTLS-MHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHH-HHHGGGCSCCCCSCCC
T ss_pred             CCCCCCCCCCcccCCHHHHH-HHHhHhCCCCCCCCCC
Confidence            35689999999999887654 8999999999999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.14  E-value=4.2e-05  Score=48.87  Aligned_cols=35  Identities=3%  Similarity=-0.110  Sum_probs=30.3

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCN  112 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~  112 (286)
                      ...|.|..|++.|.....+. .|+++|++++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~   44 (44)
T 2en7_A           10 MKPYVCNECGKAFRSKSYLI-IHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSSCCTTTCCCCSSHHHHH-HHHTTTCCSSSSCCC
T ss_pred             CcCeECCCCCCccCCHHHHH-HHhhhcCCCCCCCCC
Confidence            35689999999999887654 899999999999985

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.13  E-value=2.5e-05  Score=50.60  Aligned_cols=37  Identities=3%  Similarity=-0.138  Sum_probs=31.5

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|+++|..+..+. .|+++|++++||.|++
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            9 GEKPYKCNECGKAFRARSSLA-IHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCEECTTSCCEESSHHHHH-HHHHHHCCCSCSCTTC
T ss_pred             CCCCeeccccCChhcCHHHHH-HHHHHcCCCCCCCCCC
Confidence            345689999999999987654 8999999999999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=97.11  E-value=2.5e-05  Score=50.79  Aligned_cols=36  Identities=0%  Similarity=-0.076  Sum_probs=31.1

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|++
T Consensus        10 ~k~~~C~~C~k~F~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A           10 EKPFECAECGKSFSISSQLA-THQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSSCEESSHHHHH-HHHHHHTTSCSSSSCC
T ss_pred             CCCEECCCCCcccCCHHHHH-HHHHHhCCCCCCCCCC
Confidence            35689999999999887654 8999999999999974

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.11  E-value=4.7e-05  Score=48.36  Aligned_cols=34  Identities=6%  Similarity=-0.218  Sum_probs=29.5

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeec
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSC  111 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C  111 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||+|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C   42 (42)
T 2eos_A            9 EKPYPCEICGTRFRHLQTLK-SHLRIHTGSGPSSG   42 (42)
T ss_dssp             SCCBCCSSSCCCBSSHHHHH-HHTTTTSCCSSTTC
T ss_pred             CCCEECCCCCCccCCHHHHH-HHHHhcCCCCCCCC
Confidence            35689999999999887654 89999999999988

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.11  E-value=3.1e-05  Score=49.85  Aligned_cols=36  Identities=3%  Similarity=-0.164  Sum_probs=30.6

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCN  112 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~  112 (286)
                      ....|.|..|+++|.....+ ..|+++|++++||+|+
T Consensus         9 ~~~~~~C~~C~k~f~~~~~L-~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            9 AKTTSECQECGKIFRHSSLL-IEHQALHAGESGPSSG   44 (44)
T ss_dssp             SSCCCCCTTTCCCCSSHHHH-HHHHHHHTTSCCCCCC
T ss_pred             CCcCeECCCCCcccCCHHHH-HHHHHHHCCCCCCCCC
Confidence            34568999999999988755 4899999999999995

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.10  E-value=4.2e-05  Score=49.67  Aligned_cols=36  Identities=3%  Similarity=-0.125  Sum_probs=30.9

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCC-CceeecCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSE-ARVFSCNY  113 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtg-eKpf~C~~  113 (286)
                      ...|.|..|+++|.....+. .|+++|++ ++||.|++
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A           10 EKCFKCNKCEKTFSCSKYLT-QHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             SCCEECSSSCCEESSSHHHH-HHHTTCCSCCTTSSSCC
T ss_pred             CCCEECcCCCCcCCCHHHHH-HHHHHcCCCCCCCCCCC
Confidence            35689999999999887654 89999999 99999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.08  E-value=3.1e-05  Score=50.24  Aligned_cols=36  Identities=3%  Similarity=-0.084  Sum_probs=31.1

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ...|.|..|+++|.....+. .|+++|++++||.|++
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~-~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A           10 EKPYECKVCSKAFTQKAHLA-QHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECSSSCCEESSHHHHH-HHHHHHCCCCCCCSCC
T ss_pred             CcCeECCCCCcccCCHHHHH-HHHHHhCCCCCCCCCC
Confidence            45689999999999887654 8999999999999975

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.06  E-value=4.6e-05  Score=48.17  Aligned_cols=35  Identities=14%  Similarity=0.001  Sum_probs=30.1

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCN  112 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~  112 (286)
                      ...|.|..|+++|..+..+. .|+++|++++||.|.
T Consensus         8 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            8 EKPYSCAECKETFSDNNRLV-QHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSCBCTTTCCBCSSHHHHH-HHHHHTSCCSSCCCC
T ss_pred             CCCeECCCCCCccCCHHHHH-HHHHHhCCCCCCCCC
Confidence            35689999999999887654 899999999999984

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.05  E-value=5e-05  Score=49.10  Aligned_cols=37  Identities=0%  Similarity=-0.160  Sum_probs=31.3

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|++.|.....+. .|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            9 GEKPYECNQCGKAFSVRSSLT-THQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCSSEETTTTEECSSHHHHH-HHHTTSCCCCCCCSCC
T ss_pred             CCCCeECCCCChhhCCHHHHH-HHHHHhCCCCCCCCCC
Confidence            345689999999999887654 8999999999999974

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=97.05  E-value=4.4e-05  Score=46.95  Aligned_cols=20  Identities=5%  Similarity=-0.022  Sum_probs=18.6

Q ss_pred             hhhhhccCCccccccccCcc
Q 046965          126 GHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       126 ~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      .|+++|++++||+|..|++.
T Consensus         1 ~H~~~h~~~k~~~C~~C~k~   20 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCPDCDRS   20 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCC
T ss_pred             CCCCcCCCCCCccCCCCCcc
Confidence            48899999999999999998

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.05  E-value=2.3e-05  Score=50.71  Aligned_cols=36  Identities=0%  Similarity=-0.097  Sum_probs=31.0

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ...|.|..|++.|..+..+. .|+++|++++||.|++
T Consensus        10 ~~~~~C~~C~k~f~~~~~L~-~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A           10 EKPYNCEECGKAFIHDSQLQ-EHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECTTTCCEESSHHHHH-HHHHHHHSCCCSSSTT
T ss_pred             CcCccCCCCCCCcCCHHHHH-HHHHhcCCCCCCCCCC
Confidence            45689999999999887654 8999999999999974

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.03  E-value=4.8e-05  Score=48.83  Aligned_cols=35  Identities=9%  Similarity=-0.069  Sum_probs=30.1

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCN  112 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~  112 (286)
                      ...|.|..|+++|.....+. .|+++|++++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~   44 (44)
T 2emb_A           10 RKRYECSKCQATFNLRKHLI-QHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CSSEECTTTCCEESCHHHHH-HHGGGGCCCCCTTCC
T ss_pred             CCCeECCCCCCccCCHHHHH-HHHHHcCCCCCcCCC
Confidence            35689999999999887654 899999999999985

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.02  E-value=3.8e-05  Score=49.08  Aligned_cols=35  Identities=3%  Similarity=-0.078  Sum_probs=30.3

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCN  112 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~  112 (286)
                      ...|.|..|+++|.....+. .|+++|++++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~   44 (44)
T 2eof_A           10 EKPYECNECQKAFNTKSNLM-VHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSEECTTTCCEESCHHHHH-HHHHHTTTSSCSCCC
T ss_pred             CCCeECCCCCcccCCHhHHH-HHHHHhCCCCCCCCC
Confidence            45689999999999887654 899999999999985

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=97.01  E-value=5.2e-05  Score=48.54  Aligned_cols=35  Identities=14%  Similarity=-0.002  Sum_probs=30.3

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCN  112 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~  112 (286)
                      ...|.|..|+++|.....+. .|+++|++++||.|+
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A           10 ENPYECCECGKVFSRKDQLV-SHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CCSCEETTTTEECSSHHHHH-HHHTTSSSSCSCCCC
T ss_pred             CcCeeCCCCCCccCCHHHHH-HHHHHcCCCCCCCCC
Confidence            35689999999999887654 899999999999995

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=96.97  E-value=4.7e-05  Score=48.13  Aligned_cols=34  Identities=6%  Similarity=-0.063  Sum_probs=29.4

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeec
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSC  111 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C  111 (286)
                      ...|.|..|+++|..+..+ ..|+++|++++||.|
T Consensus         9 ~~~~~C~~C~k~f~~~~~l-~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            9 ETPYLCGQCGKSFTQRGSL-AVHQRSCSQSGPSSG   42 (42)
T ss_dssp             SCCEECSSSCCEESSHHHH-HHHHHHTTCCCCCCC
T ss_pred             CCCeECCCCCcccCCHHHH-HHHhhhcCCCCCCCC
Confidence            3468999999999988765 489999999999998

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.95  E-value=3.9e-05  Score=49.83  Aligned_cols=36  Identities=6%  Similarity=-0.007  Sum_probs=30.9

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ...|.|..|++.|..+..+. .|+++|++++||.|+.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A           10 EKPYKCSDCGKAFTRKSGLH-IHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCEECSSSCCEESSHHHHH-HHHHHHTCCCBTTTBC
T ss_pred             CCCEECcccCCccCCHhHHH-HHHHHcCCCCCCCCCC
Confidence            45689999999999887654 8999999999999973

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.92  E-value=6.1e-05  Score=48.31  Aligned_cols=35  Identities=11%  Similarity=0.010  Sum_probs=30.1

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCN  112 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~  112 (286)
                      ...|.|..|+++|.....+. .|+++|++++||.|.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A           10 ENPFKCSKCDRVFTQRNYLV-QHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSEECSSSSCEESSSHHHH-HHHHHCCCCCSSCCC
T ss_pred             CCCeECCCCCchhCCHHHHH-HHhHhcCCCCCCCCC
Confidence            35689999999999887654 899999999999985

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.88  E-value=6.4e-05  Score=48.22  Aligned_cols=35  Identities=6%  Similarity=-0.128  Sum_probs=30.1

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCN  112 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~  112 (286)
                      ...|.|..|+++|.....+. .|+++|++++||.|.
T Consensus        10 ~~~~~C~~C~k~F~~~~~L~-~H~~~H~~~~~~~C~   44 (44)
T 2eox_A           10 SKSYNCNECGKAFTRIFHLT-RHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCEEETTTTEEESSSHHHH-TTHHHHCCCCCCSCC
T ss_pred             CCCeECcccCcccCCHHHHH-HHHHHhCCCCCCCCC
Confidence            45689999999999987654 899999999999984

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.86  E-value=4.3e-05  Score=49.65  Aligned_cols=37  Identities=3%  Similarity=-0.167  Sum_probs=31.4

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ....|.|..|+++|.....+. .|+++|++++||.|+.
T Consensus         9 ~~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            9 GERPFKCNECGKGFGRRSHLA-GHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCCCSSSCCCCSSHHHHH-HHHHHHHHTTCCCSCC
T ss_pred             CCCCeECCCCCcccCCHHHHH-HHHHHhCCCCCCCCCC
Confidence            345689999999999987654 8999999999999973

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.85  E-value=4.8e-05  Score=49.39  Aligned_cols=36  Identities=3%  Similarity=-0.179  Sum_probs=31.0

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      ...|.|..|++.|.....+. .|+++|++++||.|+.
T Consensus        10 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A           10 EKPYSCNVCGKAFVLSAHLN-QHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CCSEEETTTTEEESSHHHHH-HHHHHHSSCCSSSCCC
T ss_pred             CCCeECcccChhhCCHHHHH-HHHHHhCCCCCCCCCC
Confidence            45689999999999887654 8999999999999974

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.71  E-value=6.5e-05  Score=47.58  Aligned_cols=34  Identities=3%  Similarity=-0.260  Sum_probs=29.3

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeec
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSC  111 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C  111 (286)
                      ...|.|..|+++|.....+. .|+++|++++||.|
T Consensus         9 ~k~~~C~~C~k~f~~~~~L~-~H~~~H~~~~~~~C   42 (42)
T 2en2_A            9 EKPYKCETCGARFVQVAHLR-AHVLIHTGSGPSSG   42 (42)
T ss_dssp             SCSEECTTTCCEESSHHHHH-HHTHHHHSCCSSCC
T ss_pred             CCCEeCCCcChhhCCHHHHH-HHHHHcCCCCCCCC
Confidence            34689999999999887654 89999999999998

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=96.63  E-value=6.1e-05  Score=48.77  Aligned_cols=35  Identities=0%  Similarity=-0.213  Sum_probs=30.2

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCN  112 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~  112 (286)
                      ...|.|..|++.|.....+ ..|+++|++++||.|.
T Consensus        10 ~k~~~C~~C~k~F~~~~~L-~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A           10 EKPFQCKECGMNFSWSCSL-FKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCSEECSSSCCEESSSHHH-HHHHHHHHHSCCSSCS
T ss_pred             CCCeeCcccChhhCCHHHH-HHHHHHhCCCCCCCCC
Confidence            3568999999999988765 4899999999999996

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=96.42  E-value=0.00017  Score=43.75  Aligned_cols=32  Identities=0%  Similarity=-0.202  Sum_probs=27.1

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCceeec
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEARVFSC  111 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C  111 (286)
                      .+.|..||+.|.....+ ..|+++|++++||.+
T Consensus         2 p~~C~~C~k~F~~~~~L-~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            2 KFACPECPKRFMRSDHL-SKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCSSSCCCCSSHHHH-HHHHHHHTTTCCCCC
T ss_pred             cccCCCCCchhCCHHHH-HHHHHHhCCCCCCCC
Confidence            46899999999988755 489999999999863

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=96.37  E-value=0.00019  Score=44.85  Aligned_cols=34  Identities=3%  Similarity=-0.175  Sum_probs=28.8

Q ss_pred             cCccccCCccchhhccCCCCCcccccCCCceeecC
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCN  112 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~  112 (286)
                      ..|.|..||+.|.....+. .|+++|++++||.|.
T Consensus         5 k~~~C~~C~k~f~~~~~L~-~H~~~H~~~k~~~~~   38 (39)
T 1njq_A            5 RSYTCSFCKREFRSAQALG-GHMNVHRRDRARLRL   38 (39)
T ss_dssp             SSEECTTTCCEESSHHHHH-HHHHTTCCSCTTTTC
T ss_pred             CceECCCCCcccCCHHHHH-HHHHHcCCCccceec
Confidence            4578999999999887654 899999999999763

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=96.09  E-value=0.00024  Score=44.00  Aligned_cols=18  Identities=0%  Similarity=-0.195  Sum_probs=16.4

Q ss_pred             hhhccCCccccccccCcc
Q 046965          128 QNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       128 qr~HtgEKpy~C~~Cgk~  145 (286)
                      |++|++++||+|.+|++.
T Consensus         1 ~~~H~~~k~~~C~~C~k~   18 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYS   18 (37)
T ss_dssp             CCSSSSSCEEECSSSSCE
T ss_pred             CCccCCCcCeECCCCCcc
Confidence            467999999999999998

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=95.86  E-value=0.00029  Score=43.13  Aligned_cols=18  Identities=6%  Similarity=-0.093  Sum_probs=16.3

Q ss_pred             hhhccCCccccccccCcc
Q 046965          128 QNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       128 qr~HtgEKpy~C~~Cgk~  145 (286)
                      +++|++++||.|..|++.
T Consensus         1 ~~~h~~~k~~~C~~C~k~   18 (37)
T 2elo_A            1 GSSGSSGRSYSCPVCEKS   18 (37)
T ss_dssp             CCCCCCCCCCEETTTTEE
T ss_pred             CCCCCCCCCcCCCCCCCc
Confidence            467999999999999998

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=95.84  E-value=0.00083  Score=50.29  Aligned_cols=37  Identities=0%  Similarity=-0.235  Sum_probs=31.0

Q ss_pred             CccCccccC--CccchhhccCCCCCcc-cccCCCceeecCC
Q 046965           76 LFNRMSMMN--NNHCHEENNGHPTSSE-KKSSEARVFSCNY  113 (286)
Q Consensus        76 e~n~~tc~~--~g~S~~~~~~~~~~H~-rtHtgeKpf~C~~  113 (286)
                      ....|.|..  |+++|..++.+. .|+ ++|+++|||-|..
T Consensus        24 GEKPYkC~~~~CgKaFsr~s~L~-~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTIQQNLI-LHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHH-HHHHHHSSSCCCCCCCS
T ss_pred             CCCCeECCCCCcChhHcCHHHHH-HHhhhhCCCCCCccccc
Confidence            446789975  999999998664 897 6899999999975

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.76  E-value=0.0015  Score=53.50  Aligned_cols=32  Identities=22%  Similarity=0.329  Sum_probs=28.9

Q ss_pred             cccccCCCceeecCCCCcccCCCccchhhhhh
Q 046965           99 SEKKSSEARVFSCNYCKREFSTSQALGGHQNA  130 (286)
Q Consensus        99 H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~  130 (286)
                      +...|+|+++|.|..|++.|.+...|..|+++
T Consensus        41 ~ded~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           41 FDPDLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SCSSSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             ccccCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            34679999999999999999999999999875

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=95.31  E-value=0.0014  Score=43.31  Aligned_cols=16  Identities=13%  Similarity=0.140  Sum_probs=14.3

Q ss_pred             hccCCccccccccCcc
Q 046965          130 AHKQERAVAKRRQGVD  145 (286)
Q Consensus       130 ~HtgEKpy~C~~Cgk~  145 (286)
                      +|+++|||.|..|++.
T Consensus         1 ~Ht~~kp~~C~~C~k~   16 (48)
T 3iuf_A            1 GEDRDKPYACDICGKR   16 (48)
T ss_dssp             -CTTTSCEECTTTCCE
T ss_pred             CCCCCcCEECCCcCcc
Confidence            5899999999999998

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=95.22  E-value=0.002  Score=42.06  Aligned_cols=23  Identities=0%  Similarity=-0.229  Sum_probs=18.7

Q ss_pred             cchhhhhhccCCcccccc--ccCcc
Q 046965          123 ALGGHQNAHKQERAVAKR--RQGVD  145 (286)
Q Consensus       123 aL~~Hqr~HtgEKpy~C~--~Cgk~  145 (286)
                      .+..|+..|++++||.|.  .|++.
T Consensus         5 ~~~~~~~~H~~~k~~~C~~~~C~k~   29 (47)
T 1ncs_A            5 GSIDKYVKEMPDKTFECLFPGCTKT   29 (47)
T ss_dssp             SSGGGSCEEETTTEEECCCTTCCCE
T ss_pred             HHHHHHhccCCCCCeECCCCCCCCc
Confidence            345566779999999996  79998

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=94.21  E-value=0.0033  Score=35.95  Aligned_cols=28  Identities=0%  Similarity=0.014  Sum_probs=23.4

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCc
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      .+.|..|+++|.....+. .|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~-~H~~~H~~~k   29 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLI-AHVRQHTGEK   29 (29)
Confidence            468999999999887654 8999999864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=93.93  E-value=0.0044  Score=35.35  Aligned_cols=28  Identities=0%  Similarity=0.000  Sum_probs=23.3

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCc
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      .|.|..||++|.....+. .|+++|++++
T Consensus         3 ~~~C~~C~k~f~~~~~l~-~H~~~h~~~k   30 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQ-RHVRIHTGEK   30 (30)
Confidence            478999999999887654 8999998864

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=94.66  E-value=0.0026  Score=38.12  Aligned_cols=30  Identities=3%  Similarity=-0.115  Sum_probs=25.2

Q ss_pred             cCccccCCccchhhccCCCCCcccccCCCce
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSSEARV  108 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKp  108 (286)
                      ..|.|..|++.|.....+. .|+++|++++|
T Consensus         6 k~~~C~~C~k~f~~~~~l~-~H~~~H~~~~~   35 (35)
T 1srk_A            6 RPFVCRICLSAFTTKANCA-RHLKVHTDTLS   35 (35)
T ss_dssp             SCEECSSSCCEESSHHHHH-HHHGGGTSCCC
T ss_pred             cCeeCCCCCcccCCHHHHH-HHHHHcCCCCC
Confidence            4678999999999887554 89999999875

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=94.60  E-value=0.0022  Score=38.26  Aligned_cols=30  Identities=7%  Similarity=-0.199  Sum_probs=25.2

Q ss_pred             cCccccCCccchhhccCCCCCcccccCCCce
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSSEARV  108 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKp  108 (286)
                      ..|.|..|+++|..+..+ ..|+++|++++|
T Consensus         6 k~~~C~~C~k~f~~~~~L-~~H~~~h~~~kp   35 (35)
T 2elx_A            6 SGYVCALCLKKFVSSIRL-RSHIREVHGAAQ   35 (35)
T ss_dssp             CSEECSSSCCEESSHHHH-HHHHHHTSCTTC
T ss_pred             CCeECCCCcchhCCHHHH-HHHHHHHcCCCC
Confidence            457899999999988765 489999999875

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=94.14  E-value=0.0026  Score=41.05  Aligned_cols=16  Identities=0%  Similarity=-0.201  Sum_probs=14.0

Q ss_pred             hccCCccccccc--cCcc
Q 046965          130 AHKQERAVAKRR--QGVD  145 (286)
Q Consensus       130 ~HtgEKpy~C~~--Cgk~  145 (286)
                      .++++|||+|.+  |++.
T Consensus         3 ~~~gekp~~C~~~~C~k~   20 (38)
T 2eln_A            3 SGSSGILLKCPTDGCDYS   20 (38)
T ss_dssp             CSSCCCCEECSSSSCCCE
T ss_pred             CCCCCCCCCCCCCCCCCc
Confidence            468899999986  9998

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=93.91  E-value=0.0038  Score=35.45  Aligned_cols=28  Identities=0%  Similarity=-0.105  Sum_probs=23.0

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCc
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      .|.|..||+.|.....+. .|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~-~H~~~H~~~k   29 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLT-LHILLHENKK   29 (29)
T ss_dssp             CEECSSSSCEESCSHHHH-HHHTGGGSCC
T ss_pred             CccCCCCCchhCCHHHHH-HHHHHhcCCC
Confidence            468999999999887554 8999998874

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=93.87  E-value=0.006  Score=35.52  Aligned_cols=28  Identities=0%  Similarity=0.010  Sum_probs=23.0

Q ss_pred             Ccccc--CCccchhhccCCCCCcccccCCCc
Q 046965           79 RMSMM--NNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        79 ~~tc~--~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      .|.|.  .||++|.....+. .|+++|++++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~-~H~~~H~~~k   31 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQ-RHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHH-HHHTTTSCCC
T ss_pred             CcCCcCCCCCcccCCHhHHH-HHHHHhcCCC
Confidence            46787  9999999887654 8999999875

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=93.78  E-value=0.0021  Score=39.41  Aligned_cols=32  Identities=6%  Similarity=0.030  Sum_probs=26.4

Q ss_pred             cCcccc--CCccchhhccCCCCCcccccCCCceee
Q 046965           78 NRMSMM--NNNHCHEENNGHPTSSEKKSSEARVFS  110 (286)
Q Consensus        78 n~~tc~--~~g~S~~~~~~~~~~H~rtHtgeKpf~  110 (286)
                      ..+.|.  .|+++|.....+. .|+++|++++||.
T Consensus         5 k~~~C~~~~C~k~f~~~~~L~-~H~~~H~~~k~~~   38 (38)
T 1bhi_A            5 KPFLCTAPGCGQRFTNEDHLA-VHKHKHEMTLKFG   38 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHH-HHHHHHHTTTTTC
T ss_pred             cceECCCCCCCcccCCHHHHH-HHHHHhCCCCCCC
Confidence            457898  6999999887654 8999999999873

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=93.76  E-value=0.0059  Score=34.11  Aligned_cols=26  Identities=4%  Similarity=-0.020  Sum_probs=20.9

Q ss_pred             ccccCCccchhhccCCCCCcccccCCC
Q 046965           80 MSMMNNNHCHEENNGHPTSSEKKSSEA  106 (286)
Q Consensus        80 ~tc~~~g~S~~~~~~~~~~H~rtHtge  106 (286)
                      +.|..|++.|.....+ ..|+++|+++
T Consensus         2 ~~C~~C~k~f~~~~~l-~~H~~~h~~~   27 (27)
T 1znf_A            2 YKCGLCERSFVEKSAL-SRHQRVHKNX   27 (27)
T ss_dssp             CBCSSSCCBCSSHHHH-HHHGGGTCC-
T ss_pred             ccCCCCCCcCCCHHHH-HHHHHHcCCC
Confidence            6799999999987754 4899999864

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.65  E-value=0.0059  Score=36.84  Aligned_cols=30  Identities=0%  Similarity=-0.251  Sum_probs=24.6

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCc
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      ...|.|..|+++|.....+ ..|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l-~~H~~~H~~~k   36 (36)
T 2elv_A            7 GLLYDCHICERKFKNELDR-DRHMLVHGDKW   36 (36)
T ss_dssp             CCCEECSSSCCEESSHHHH-HHHHTTTSTTC
T ss_pred             CCCeECCCCCCccCCHHHH-HHHHHHhcCCC
Confidence            3468999999999988765 48999999874

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=93.61  E-value=0.0042  Score=35.14  Aligned_cols=28  Identities=0%  Similarity=-0.025  Sum_probs=22.9

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCc
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      .|.|..|+++|.....+. .|+++|++++
T Consensus         2 ~~~C~~C~~~f~~~~~l~-~H~~~h~~~k   29 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLK-RHYRSHTNEK   29 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHH-HHHHHHSCCC
T ss_pred             CeECCCCCcccCCHHHHH-HHHHHhcCCC
Confidence            478999999999887554 8899998864

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=93.34  E-value=0.0057  Score=36.70  Aligned_cols=30  Identities=3%  Similarity=-0.217  Sum_probs=24.5

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCc
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      ...+.|..|++.|.....+. .|+++|++++
T Consensus         7 ~~~~~C~~C~k~f~~~~~l~-~H~~~H~~ek   36 (36)
T 2elr_A            7 GKTHLCDMCGKKFKSKGTLK-SHKLLHTADG   36 (36)
T ss_dssp             CSSCBCTTTCCBCSSHHHHH-HHHHHHSSCC
T ss_pred             CCCeecCcCCCCcCchHHHH-HHHHHhcCCC
Confidence            35689999999999887654 8999999875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=93.33  E-value=0.0051  Score=34.87  Aligned_cols=29  Identities=3%  Similarity=-0.038  Sum_probs=23.3

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCce
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEARV  108 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeKp  108 (286)
                      .+.|..|++.|.....+ ..|+++|+++++
T Consensus         2 ~~~C~~C~k~f~~~~~l-~~H~~~h~~~~~   30 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNL-KTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCSSSSCCCSCSHHH-HHHHHHHTSSCC
T ss_pred             CccCCCCCCccCCHHHH-HHHHHHHccCCC
Confidence            46899999999987754 488899988764

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=93.29  E-value=0.0052  Score=34.85  Aligned_cols=28  Identities=0%  Similarity=-0.059  Sum_probs=22.8

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCc
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      .+.|..||++|.....+. .|+++|++++
T Consensus         3 ~~~C~~C~~~f~~~~~l~-~H~~~h~~~k   30 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKM-RHLETHDTDK   30 (30)
T ss_dssp             CEECTTTCCEESCHHHHH-HHHHTTCCCC
T ss_pred             CccCCCCCcccCCHHHHH-HHHHHhccCC
Confidence            578999999999877554 8999999874

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=93.17  E-value=0.011  Score=33.62  Aligned_cols=28  Identities=11%  Similarity=-0.105  Sum_probs=22.6

Q ss_pred             CccccCCccchhhccCCCCCc-ccccCCCc
Q 046965           79 RMSMMNNNHCHEENNGHPTSS-EKKSSEAR  107 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H-~rtHtgeK  107 (286)
                      .|.|..|+++|.....+. .| +++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~-~H~~~~H~~~~   30 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLI-RHAQKIHSGNL   30 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHH-HHHTTTSCCCC
T ss_pred             CcCCcccCcccCChHHHH-HHHHHHccCCC
Confidence            478999999999877554 78 78998874

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=92.86  E-value=0.011  Score=34.53  Aligned_cols=28  Identities=14%  Similarity=0.083  Sum_probs=23.0

Q ss_pred             Ccccc--CCccchhhccCCCCCcccccCCCc
Q 046965           79 RMSMM--NNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        79 ~~tc~--~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      .|.|.  .|+++|.....+ ..|+++|++++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L-~~H~~~H~~~~   32 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDL-IRHKKSHQEKA   32 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHH-HHHHGGGTCCC
T ss_pred             CCcCcCCCCCCccCCHHHH-HHHHHHccCCC
Confidence            46898  899999988755 48999999874

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=92.85  E-value=0.0059  Score=36.63  Aligned_cols=30  Identities=3%  Similarity=-0.112  Sum_probs=24.5

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCc
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      ...|.|..|++.|.....+. .|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l~-~H~~~H~~~k   36 (36)
T 2elt_A            7 GKPYKCPQCSYASAIKANLN-VHLRKHTGEK   36 (36)
T ss_dssp             CCSEECSSSSCEESSHHHHH-HHHHHHTCCC
T ss_pred             CCCCCCCCCCcccCCHHHHH-HHHHHccCCC
Confidence            35689999999999887554 8999999874

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=92.77  E-value=0.0063  Score=34.17  Aligned_cols=28  Identities=4%  Similarity=-0.110  Sum_probs=22.5

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCc
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      .+.|..|+++|.....+ ..|+++|++++
T Consensus         2 ~~~C~~C~~~f~~~~~l-~~H~~~h~~~~   29 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNL-KAHLKIHIADG   29 (29)
T ss_dssp             CCCCSSCCCCCCTTTHH-HHHHHHHHSCC
T ss_pred             CCcCCCCCcccCCHHHH-HHHHHHhccCC
Confidence            46899999999987754 48889998764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=92.72  E-value=0.018  Score=41.69  Aligned_cols=40  Identities=8%  Similarity=-0.009  Sum_probs=31.0

Q ss_pred             CCccCccccCCccchhhccCCCCCcccccCCCceeecCCCCc
Q 046965           75 GLFNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKR  116 (286)
Q Consensus        75 ~e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK  116 (286)
                      ++...|.|.+|+++|..+..+. .|+++|+++. ..|..|..
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~-~H~r~Htg~~-~~~~~~~~   48 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLR-QHEAQHGVTS-LQLGYIDL   48 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHH-HHHHHHTTTS-CCCCSCCC
T ss_pred             CCccCcCCCCCCCccCCHHHHH-hhhhhhCCCc-cccccccC
Confidence            3567899999999999888654 8999999975 35555543

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=91.89  E-value=0.02  Score=31.70  Aligned_cols=25  Identities=0%  Similarity=-0.093  Sum_probs=20.4

Q ss_pred             CccccCCccchhhccCCCCCcccccC
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSS  104 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHt  104 (286)
                      .+.|..||++|.....+. .|+++|+
T Consensus         2 p~~C~~C~k~f~~~~~l~-~H~~~H~   26 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLA-NHIRHHD   26 (26)
Confidence            468999999999887654 8888874

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=92.62  E-value=0.0079  Score=36.25  Aligned_cols=31  Identities=3%  Similarity=-0.069  Sum_probs=25.0

Q ss_pred             CccCccccCCccchhhccCCCCCcccccCCCc
Q 046965           76 LFNRMSMMNNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        76 e~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      ....|.|..|++.|.....+. .|+++|++++
T Consensus         6 ~~k~~~C~~C~k~f~~~~~l~-~H~~~H~~~k   36 (36)
T 2elq_A            6 SGKPFKCSLCEYATRSKSNLK-AHMNRHSTEK   36 (36)
T ss_dssp             CCCSEECSSSSCEESCHHHHH-HHHHHSSTTC
T ss_pred             CCCCccCCCCCchhCCHHHHH-HHHHHhccCC
Confidence            345689999999999887654 8999999874

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=92.62  E-value=0.0063  Score=36.70  Aligned_cols=30  Identities=3%  Similarity=-0.043  Sum_probs=24.4

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCc
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      ...|.|..|++.|.....+ ..|+++|++++
T Consensus         7 ~k~~~C~~C~k~f~~~~~l-~~H~~~H~~~k   36 (36)
T 2els_A            7 GKIFTCEYCNKVFKFKHSL-QAHLRIHTNEK   36 (36)
T ss_dssp             CCCEECTTTCCEESSHHHH-HHHHHHHCCCC
T ss_pred             CCCEECCCCCceeCCHHHH-HHHHHHhCCCC
Confidence            3568999999999988755 48999999874

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=92.04  E-value=0.0047  Score=34.83  Aligned_cols=28  Identities=4%  Similarity=-0.029  Sum_probs=22.4

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCc
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      .+.|..|+++|.....+. .|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~-~H~~~H~~~k   29 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLK-RHLRIHSGEK   29 (29)
T ss_dssp             CEECTTTSCEESCHHHHH-HHHHHHHTCC
T ss_pred             CccCCCCCCccCChhHHH-HHHHHhcCCC
Confidence            367999999998877554 8889998874

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=91.84  E-value=0.046  Score=32.86  Aligned_cols=17  Identities=12%  Similarity=-0.038  Sum_probs=15.6

Q ss_pred             hhccCCccccccccCcc
Q 046965          129 NAHKQERAVAKRRQGVD  145 (286)
Q Consensus       129 r~HtgEKpy~C~~Cgk~  145 (286)
                      ++|++++||+|..|++.
T Consensus         2 ~~h~~~k~~~C~~C~k~   18 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFY   18 (37)
T ss_dssp             CSCCCCCCEECSSSSCE
T ss_pred             CCCCCCCCeECCCCChh
Confidence            47899999999999998

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=91.33  E-value=0.011  Score=37.84  Aligned_cols=30  Identities=7%  Similarity=0.107  Sum_probs=23.6

Q ss_pred             ccCccccCCccchhhccCCCCCcccccCCCceeecCCC
Q 046965           77 FNRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYC  114 (286)
Q Consensus        77 ~n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~C  114 (286)
                      ...|.|.+||++|..++.+. .|+       ||.|...
T Consensus         6 ekp~~C~~CgK~F~~~s~L~-~H~-------py~C~~r   35 (36)
T 1fv5_A            6 PARFMCLPCGIAFSSPSTLE-AHQ-------AYYCSHR   35 (36)
T ss_dssp             CCCCEETTTTEECSCHHHHH-HHH-------HHTSTTC
T ss_pred             ccCeECCCCCCccCCHhHcc-CcC-------CeECcCC
Confidence            45789999999999988654 554       8888753

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=90.92  E-value=0.016  Score=32.56  Aligned_cols=26  Identities=4%  Similarity=-0.123  Sum_probs=20.9

Q ss_pred             CccccCCccchhhccCCCCCcccccCC
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSE  105 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtg  105 (286)
                      .+.|..|++.|.....+. .|+++|++
T Consensus         3 ~~~C~~C~k~f~~~~~l~-~H~~~h~~   28 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQME-THYRVHTG   28 (28)
T ss_dssp             SEECSSSCCEESCHHHHH-HHHTTSCC
T ss_pred             CccCCCCCcccCCHHHHH-HHHHhcCC
Confidence            578999999999877554 78888874

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=88.84  E-value=0.017  Score=35.21  Aligned_cols=29  Identities=3%  Similarity=-0.060  Sum_probs=23.5

Q ss_pred             cCcccc--CCccchhhccCCCCCcccccCCCc
Q 046965           78 NRMSMM--NNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        78 n~~tc~--~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      ..|.|.  .||++|...+.+. .|+++|++++
T Consensus         7 k~~~C~~~~C~k~f~~~~~L~-~H~~~H~~ek   37 (37)
T 1va1_A            7 KQHICHIQGCGKVYGKTSHLR-AHLRWHTGER   37 (37)
T ss_dssp             CCEECCSTTCCCEESCHHHHH-HHHHHHHTTC
T ss_pred             CCCCCCCCCCCCccCCHHHHH-HHHHhcCCCC
Confidence            467898  6999999887654 8999999874

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=85.80  E-value=0.33  Score=34.40  Aligned_cols=37  Identities=19%  Similarity=0.314  Sum_probs=24.9

Q ss_pred             eecCC--CCcccCCCccchhhh-hhccCCc------ccccc--ccCcc
Q 046965          109 FSCNY--CKREFSTSQALGGHQ-NAHKQER------AVAKR--RQGVD  145 (286)
Q Consensus       109 f~C~~--CgK~F~sssaL~~Hq-r~HtgEK------py~C~--~Cgk~  145 (286)
                      |.|.+  |++.|.+...|..|+ +.|.+.+      +|.|.  .|++.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~   49 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFL   49 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCE
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCC
Confidence            34544  777888777788886 4676654      67775  67664

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=84.87  E-value=0.09  Score=37.45  Aligned_cols=47  Identities=15%  Similarity=0.132  Sum_probs=36.1

Q ss_pred             CCccchhhccCCCCCcc-cccCCCc------eeecC--CCCcccCCCccchhhhhhc
Q 046965           84 NNNHCHEENNGHPTSSE-KKSSEAR------VFSCN--YCKREFSTSQALGGHQNAH  131 (286)
Q Consensus        84 ~~g~S~~~~~~~~~~H~-rtHtgeK------pf~C~--~CgK~F~sssaL~~Hqr~H  131 (286)
                      +|++.|.....+ ..|. +.|.+.+      +|.|.  .|++.+.....|..|+++.
T Consensus         8 ~C~~~f~~~~~l-~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            8 ECPESASSLFDL-QRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TCCCCCSSHHHH-HHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCcCCCHHHH-HHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            577877766543 3676 4677665      89998  6999999989999998864

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=84.54  E-value=0.26  Score=33.89  Aligned_cols=23  Identities=30%  Similarity=0.570  Sum_probs=21.5

Q ss_pred             ceeecCCCCcccCCCccchhhhh
Q 046965          107 RVFSCNYCKREFSTSQALGGHQN  129 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr  129 (286)
                      -+|.|+.|++.|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            57899999999999999999997

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	286
d1njqa_	37	g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale c	2e-12

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

 Score = 58.2 bits (141), Expect = 2e-12
 Identities = 17/33 (51%), Positives = 27/33 (81%)

Query: 107 RVFSCNYCKREFSTSQALGGHQNAHKQERAVAK 139
           R ++C++CKREF ++QALGGH N H+++RA  +
Sbjct: 4   RSYTCSFCKREFRSAQALGGHMNVHRRDRARLR 36

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	286
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.26
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.23
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.23
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.11
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.1
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.05
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.02
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.9
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.83
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.81
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.81
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.8
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.75
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.64
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.6
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.47
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.46
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.46
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.2
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.18
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.18
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.16
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.06
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.97
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.93
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.89
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	97.8
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	97.72
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	97.69
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.67
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.58
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.57
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	97.42
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.18
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.18
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	97.14
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.99
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	96.9
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	96.87
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	96.7
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.7
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	96.66
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.62
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	96.53
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.37
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.31
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.07
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.73
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	95.69
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.63
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.41
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.39
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.3
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.23
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.2
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	94.53
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	93.86
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	93.73
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.08
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.74
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	92.57
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	92.44
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	91.83
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	91.43
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	91.34
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	90.81
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	90.08
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	87.87
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	87.14
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.06
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	82.94

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.9e-13  Score=94.38  Aligned_cols=39  Identities=18%  Similarity=0.385  Sum_probs=30.9

Q ss_pred             CceeecCCCCcccCCCccchhhhhhccCCccccccccCcc
Q 046965          106 ARVFSCNYCKREFSTSQALGGHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       106 eKpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      ||||+| .||+.|.....|..|+++|++++||.|.+||++
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~   39 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKK   39 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCE
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCE
Confidence            577888 488888888888888888888888888888877

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1.8e-13  Score=94.60  Aligned_cols=52  Identities=15%  Similarity=0.319  Sum_probs=48.2

Q ss_pred             cCccccCCccchhhccCCCCCcccccCCCceeecCCCCcccCCCccchhhhhhc
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEKKSSEARVFSCNYCKREFSTSQALGGHQNAH  131 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~H  131 (286)
                      .+|+| +||++|..+..+. .|+++|++++||.|.+|++.|.....|..|+++|
T Consensus         2 K~y~C-~Cgk~F~~~~~l~-~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPC-QCGKSFTHKSQRD-RHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEEC-TTSCEESSHHHHH-HHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCC-CCCCeECCHHHhH-HHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            36899 7999999998665 8999999999999999999999999999999987

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1.2e-12  Score=85.32  Aligned_cols=37  Identities=35%  Similarity=0.633  Sum_probs=35.9

Q ss_pred             CcccccCCCceeecCCCCcccCCCccchhhhhhccCC
Q 046965           98 SSEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQE  134 (286)
Q Consensus        98 ~H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgE  134 (286)
                      .|+++|+++|||+|++|+|.|...+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            6899999999999999999999999999999999997

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=9.2e-12  Score=78.70  Aligned_cols=33  Identities=33%  Similarity=0.539  Sum_probs=31.9

Q ss_pred             ccCCCceeecCCCCcccCCCccchhhhhhccCC
Q 046965          102 KSSEARVFSCNYCKREFSTSQALGGHQNAHKQE  134 (286)
Q Consensus       102 tHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgE  134 (286)
                      +||++|||+|.+|+++|.+.+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            599999999999999999999999999999987

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=1.1e-11  Score=81.10  Aligned_cols=37  Identities=27%  Similarity=0.542  Sum_probs=34.3

Q ss_pred             CCceeecCCCCcccCCCccchhhhh-hccCCccccccc
Q 046965          105 EARVFSCNYCKREFSTSQALGGHQN-AHKQERAVAKRR  141 (286)
Q Consensus       105 geKpf~C~~CgK~F~sssaL~~Hqr-~HtgEKpy~C~~  141 (286)
                      .+|||+|.+|+|.|.....|..|++ +|++||||+|..
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            5799999999999999999999975 899999999963

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.05  E-value=2.3e-11  Score=78.64  Aligned_cols=35  Identities=34%  Similarity=0.579  Sum_probs=33.4

Q ss_pred             cccccCCCceeecCCCCcccCCCccchhhhhhccC
Q 046965           99 SEKKSSEARVFSCNYCKREFSTSQALGGHQNAHKQ  133 (286)
Q Consensus        99 H~rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~Htg  133 (286)
                      |.|+|+|||||+|.+|+++|.++..|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            78999999999999999999999999999999964

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=3.4e-11  Score=77.34  Aligned_cols=34  Identities=18%  Similarity=0.458  Sum_probs=32.5

Q ss_pred             cccCCCceeecCCCCcccCCCccchhhhhhccCC
Q 046965          101 KKSSEARVFSCNYCKREFSTSQALGGHQNAHKQE  134 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgE  134 (286)
                      |+|||||||+|.+|+++|.....|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            6899999999999999999999999999999876

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=2e-10  Score=73.35  Aligned_cols=33  Identities=30%  Similarity=0.516  Sum_probs=31.1

Q ss_pred             cCCCceeecCCCCcccCCCccchhhhhhccCCc
Q 046965          103 SSEARVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       103 HtgeKpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      |||||||+|.+|+|.|.++..|..|+++|+.+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~~   34 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCcC
Confidence            799999999999999999999999999998753

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.83  E-value=4.2e-10  Score=76.23  Aligned_cols=38  Identities=21%  Similarity=0.531  Sum_probs=34.8

Q ss_pred             CCcccccCCCceeecCC--CCcccCCCccchhhhhhccCCc
Q 046965           97 TSSEKKSSEARVFSCNY--CKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus        97 ~~H~rtHtgeKpf~C~~--CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      ..|+ .|++++||.|.+  |++.|.....|..|+++|++||
T Consensus         8 ~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           8 DKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4565 599999999988  9999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.81  E-value=4.1e-10  Score=68.94  Aligned_cols=29  Identities=34%  Similarity=0.770  Sum_probs=28.0

Q ss_pred             ceeecCCCCcccCCCccchhhhhhccCCc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      |||.|++|++.|.+...|..|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            69999999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=5.1e-10  Score=71.76  Aligned_cols=33  Identities=21%  Similarity=0.491  Sum_probs=29.7

Q ss_pred             cccCCCceeecCCCCcccCCCccchhhhh-hccC
Q 046965          101 KKSSEARVFSCNYCKREFSTSQALGGHQN-AHKQ  133 (286)
Q Consensus       101 rtHtgeKpf~C~~CgK~F~sssaL~~Hqr-~Htg  133 (286)
                      |+|||||||+|++|++.|.++..|..|++ .|+.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            68999999999999999999999999975 4543

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=6.4e-10  Score=68.08  Aligned_cols=29  Identities=28%  Similarity=0.685  Sum_probs=28.0

Q ss_pred             ceeecCCCCcccCCCccchhhhhhccCCc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      |||.|++|+|.|.++..|..|+++|++||
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            69999999999999999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.75  E-value=7.3e-10  Score=67.32  Aligned_cols=28  Identities=36%  Similarity=0.689  Sum_probs=27.0

Q ss_pred             CceeecCCCCcccCCCccchhhhhhccC
Q 046965          106 ARVFSCNYCKREFSTSQALGGHQNAHKQ  133 (286)
Q Consensus       106 eKpf~C~~CgK~F~sssaL~~Hqr~Htg  133 (286)
                      ||||+|.+|+|.|.++..|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6999999999999999999999999986

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=2.4e-09  Score=68.55  Aligned_cols=32  Identities=28%  Similarity=0.528  Sum_probs=30.8

Q ss_pred             eecCC--CCcccCCCccchhhhhhccCCcccccc
Q 046965          109 FSCNY--CKREFSTSQALGGHQNAHKQERAVAKR  140 (286)
Q Consensus       109 f~C~~--CgK~F~sssaL~~Hqr~HtgEKpy~C~  140 (286)
                      |.|++  |++.|.....|++|+++|+++|||+|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            88987  999999999999999999999999996

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=3e-09  Score=63.44  Aligned_cols=26  Identities=31%  Similarity=0.641  Sum_probs=25.1

Q ss_pred             ceeecCCCCcccCCCccchhhhhhcc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      |||+|.+|||.|..++.|..|+++||
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            79999999999999999999999996

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=1.6e-08  Score=62.21  Aligned_cols=28  Identities=25%  Similarity=0.688  Sum_probs=26.9

Q ss_pred             ceeecCC--CCcccCCCccchhhhhhccCC
Q 046965          107 RVFSCNY--CKREFSTSQALGGHQNAHKQE  134 (286)
Q Consensus       107 Kpf~C~~--CgK~F~sssaL~~Hqr~HtgE  134 (286)
                      |||.|++  |+|.|.++..|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6999999  999999999999999999986

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=1.4e-08  Score=62.38  Aligned_cols=28  Identities=29%  Similarity=0.689  Sum_probs=26.8

Q ss_pred             ceeecCC--CCcccCCCccchhhhhhccCC
Q 046965          107 RVFSCNY--CKREFSTSQALGGHQNAHKQE  134 (286)
Q Consensus       107 Kpf~C~~--CgK~F~sssaL~~Hqr~HtgE  134 (286)
                      |||.|++  |+|+|.....|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6999988  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=1.9e-08  Score=62.29  Aligned_cols=29  Identities=38%  Similarity=0.862  Sum_probs=27.1

Q ss_pred             ceeecC--CCCcccCCCccchhhhhhccCCc
Q 046965          107 RVFSCN--YCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       107 Kpf~C~--~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      |||.|+  .|+|.|.....|..|+++|++||
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            699996  49999999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.20  E-value=2.5e-07  Score=57.53  Aligned_cols=29  Identities=28%  Similarity=0.713  Sum_probs=27.1

Q ss_pred             CceeecCC--CCcccCCCccchhhhhhccCC
Q 046965          106 ARVFSCNY--CKREFSTSQALGGHQNAHKQE  134 (286)
Q Consensus       106 eKpf~C~~--CgK~F~sssaL~~Hqr~HtgE  134 (286)
                      ||||.|++  |+|+|.....|..|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            68999998  999999999999999999864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.18  E-value=1.3e-07  Score=57.52  Aligned_cols=27  Identities=37%  Similarity=0.704  Sum_probs=25.7

Q ss_pred             ceeecCC--CCcccCCCccchhhhhhccC
Q 046965          107 RVFSCNY--CKREFSTSQALGGHQNAHKQ  133 (286)
Q Consensus       107 Kpf~C~~--CgK~F~sssaL~~Hqr~Htg  133 (286)
                      |||+|++  |+|+|..+..|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6999988  99999999999999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=5e-08  Score=62.82  Aligned_cols=20  Identities=10%  Similarity=0.096  Sum_probs=19.3

Q ss_pred             hhhhhccCCccccccccCcc
Q 046965          126 GHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       126 ~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      +|+++|+++|||+|.+|||+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~   21 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKS   21 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCB
T ss_pred             ccCcccCCCCCEecCCCCce
Confidence            69999999999999999998

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=3e-07  Score=55.49  Aligned_cols=26  Identities=31%  Similarity=0.763  Sum_probs=24.8

Q ss_pred             ceeecCC--CCcccCCCccchhhhhhcc
Q 046965          107 RVFSCNY--CKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       107 Kpf~C~~--CgK~F~sssaL~~Hqr~Ht  132 (286)
                      |||.|++  |+|+|.+...|+.|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6999998  9999999999999999996

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.06  E-value=1.1e-07  Score=60.84  Aligned_cols=20  Identities=5%  Similarity=-0.022  Sum_probs=18.9

Q ss_pred             hhhhhccCCccccccccCcc
Q 046965          126 GHQNAHKQERAVAKRRQGVD  145 (286)
Q Consensus       126 ~Hqr~HtgEKpy~C~~Cgk~  145 (286)
                      +|.|+|++||||+|.+|+++
T Consensus         1 gh~R~HTgeKPy~C~~C~k~   20 (37)
T d1p7aa_           1 GSTRGSTGIKPFQCPDCDRS   20 (37)
T ss_dssp             CCSSTTCCSSSBCCTTTCCC
T ss_pred             CCCCccCCccCeEeCCCCCE
Confidence            48999999999999999998

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=2.1e-07  Score=60.28  Aligned_cols=35  Identities=9%  Similarity=0.061  Sum_probs=30.0

Q ss_pred             cCccccCCccchhhccCCCCCccc-ccCCCceeecCC
Q 046965           78 NRMSMMNNNHCHEENNGHPTSSEK-KSSEARVFSCNY  113 (286)
Q Consensus        78 n~~tc~~~g~S~~~~~~~~~~H~r-tHtgeKpf~C~~  113 (286)
                      ..|.|.+||++|..++.+. .|++ +|+++|||+|++
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~-~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLN-GHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             CCEECSSSCCEESSHHHHH-HHHHHTSCCCCCCCSSS
T ss_pred             CCccCCCCCCCcCChHHhh-ccCcCccCCCcCcCCcC
Confidence            3678999999999998654 8975 899999999974

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.93  E-value=1.1e-06  Score=56.00  Aligned_cols=30  Identities=57%  Similarity=1.236  Sum_probs=27.6

Q ss_pred             ceeecCCCCcccCCCccchhhhhhccCCcc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHKQERA  136 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~HtgEKp  136 (286)
                      +.|+|.+|++.|.+.++|++||+.|..+|.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r~   33 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDRA   33 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSCT
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchHH
Confidence            579999999999999999999999987764

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.89  E-value=1.7e-06  Score=51.29  Aligned_cols=27  Identities=30%  Similarity=0.678  Sum_probs=25.6

Q ss_pred             CceeecCCCCcccCCCccchhhhhhcc
Q 046965          106 ARVFSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       106 eKpf~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      ||||.|++||+.|..+...++|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            689999999999999999999999985

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=5.1e-07  Score=56.40  Aligned_cols=16  Identities=19%  Similarity=0.171  Sum_probs=15.3

Q ss_pred             hccCCccccccccCcc
Q 046965          130 AHKQERAVAKRRQGVD  145 (286)
Q Consensus       130 ~HtgEKpy~C~~Cgk~  145 (286)
                      +|++||||+|.+||++
T Consensus         1 IHTgekpy~C~~Cgk~   16 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKA   16 (33)
T ss_dssp             TTTTCCCEECSSSCCE
T ss_pred             CcCCCCCeeCCCCCCE
Confidence            6999999999999998

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=9.3e-07  Score=56.07  Aligned_cols=17  Identities=18%  Similarity=0.149  Sum_probs=16.2

Q ss_pred             hhccCCccccccccCcc
Q 046965          129 NAHKQERAVAKRRQGVD  145 (286)
Q Consensus       129 r~HtgEKpy~C~~Cgk~  145 (286)
                      |+|++||||+|.+||++
T Consensus         1 R~HTgekPy~C~~C~k~   17 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKT   17 (36)
T ss_dssp             TTCCCCCCEECSSSSCE
T ss_pred             CCCCCCCCEECCCCCCC
Confidence            68999999999999998

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=5.3e-07  Score=57.35  Aligned_cols=33  Identities=15%  Similarity=0.215  Sum_probs=27.9

Q ss_pred             cccc--CCccchhhccCCCCCcccccCCCceeecCC
Q 046965           80 MSMM--NNNHCHEENNGHPTSSEKKSSEARVFSCNY  113 (286)
Q Consensus        80 ~tc~--~~g~S~~~~~~~~~~H~rtHtgeKpf~C~~  113 (286)
                      |.|.  .||++|..+..+. .|+++|+|+|||+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~-~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLK-EHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHH-HHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhc-cccCeeCCCCCEeCCC
Confidence            4565  5999999988654 9999999999999974

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=5.5e-06  Score=47.74  Aligned_cols=26  Identities=27%  Similarity=0.538  Sum_probs=24.5

Q ss_pred             eeecCCCCcccCCCccchhhhhhccC
Q 046965          108 VFSCNYCKREFSTSQALGGHQNAHKQ  133 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr~Htg  133 (286)
                      |++|+.|+|.|+.+..|+.|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            67899999999999999999999986

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.58  E-value=9.1e-06  Score=49.93  Aligned_cols=32  Identities=22%  Similarity=0.506  Sum_probs=29.6

Q ss_pred             ceeecCCCCcccCCCccchhhhhhccCCcccc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHKQERAVA  138 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~HtgEKpy~  138 (286)
                      |...|..|||.|.....|.+|...|++||||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            45789999999999999999999999999984

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=1e-05  Score=47.38  Aligned_cols=27  Identities=37%  Similarity=0.596  Sum_probs=25.1

Q ss_pred             eeecCCCCcccCCCccchhhhhhccCC
Q 046965          108 VFSCNYCKREFSTSQALGGHQNAHKQE  134 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr~HtgE  134 (286)
                      .+.|.+|||.|..++.|++|+.+|++|
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            468999999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.42  E-value=4.3e-06  Score=52.70  Aligned_cols=15  Identities=13%  Similarity=-0.070  Sum_probs=14.4

Q ss_pred             ccCCccccccccCcc
Q 046965          131 HKQERAVAKRRQGVD  145 (286)
Q Consensus       131 HtgEKpy~C~~Cgk~  145 (286)
                      |+|||||+|.+|++.
T Consensus         2 ~TGekPy~C~~C~k~   16 (35)
T d1srka_           2 SSGKRPFVCRICLSA   16 (35)
T ss_dssp             CSCCSCEECSSSCCE
T ss_pred             CCCCccccCCCCCCc
Confidence            799999999999998

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=5.3e-05  Score=44.55  Aligned_cols=29  Identities=28%  Similarity=0.501  Sum_probs=26.9

Q ss_pred             CceeecCCCCcccCCCccchhhhhhccCC
Q 046965          106 ARVFSCNYCKREFSTSQALGGHQNAHKQE  134 (286)
Q Consensus       106 eKpf~C~~CgK~F~sssaL~~Hqr~HtgE  134 (286)
                      ++||+|..|...-..++.|..|.+.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            68999999999999999999999999974

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.18  E-value=1.1e-05  Score=48.71  Aligned_cols=28  Identities=0%  Similarity=-0.025  Sum_probs=24.7

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCc
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      .|.|..||++|..++.+. .|+++|||||
T Consensus         2 p~~C~~C~k~F~~~~~L~-~H~r~HTgEK   29 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLK-RHYRSHTNEK   29 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHH-HHHHTTTSSC
T ss_pred             cCCCCCCCCCCCCchHcc-cccCcccCCC
Confidence            578999999999998654 9999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=1.2e-05  Score=48.47  Aligned_cols=28  Identities=4%  Similarity=0.013  Sum_probs=24.8

Q ss_pred             CccccCCccchhhccCCCCCcccccCCCc
Q 046965           79 RMSMMNNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        79 ~~tc~~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      .|.|..||++|..++.+. .|+++|+|||
T Consensus         2 py~C~~C~k~F~~~s~L~-~H~r~HtgeK   29 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLS-KHIKTHQNKK   29 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHH-HHHHGGGCCC
T ss_pred             CEECCcCCCeecchHHhh-hhcCccCCcC
Confidence            578999999999998654 9999999986

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.99  E-value=7.8e-05  Score=44.73  Aligned_cols=29  Identities=21%  Similarity=0.511  Sum_probs=26.7

Q ss_pred             CceeecCCCCcccCCCccchhhhhhccCC
Q 046965          106 ARVFSCNYCKREFSTSQALGGHQNAHKQE  134 (286)
Q Consensus       106 eKpf~C~~CgK~F~sssaL~~Hqr~HtgE  134 (286)
                      ||||+|++|...|..+..+.-|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68999999999999999999999999764

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.90  E-value=3.8e-05  Score=51.21  Aligned_cols=24  Identities=0%  Similarity=-0.132  Sum_probs=20.1

Q ss_pred             CccchhhhhhccCCccccccc--cCcc
Q 046965          121 SQALGGHQNAHKQERAVAKRR--QGVD  145 (286)
Q Consensus       121 ssaL~~Hqr~HtgEKpy~C~~--Cgk~  145 (286)
                      ...|..|+. |++||||+|..  |++.
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~   29 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKT   29 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCE
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCcc
Confidence            356777875 99999999987  9998

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00012  Score=45.97  Aligned_cols=17  Identities=12%  Similarity=0.012  Sum_probs=16.1

Q ss_pred             hhccCCccccccccCcc
Q 046965          129 NAHKQERAVAKRRQGVD  145 (286)
Q Consensus       129 r~HtgEKpy~C~~Cgk~  145 (286)
                      |+|+|||||+|..|+++
T Consensus         1 R~HTgekP~~C~~C~k~   17 (36)
T d2ct1a2           1 RTHSGEKPYECYICHAR   17 (36)
T ss_dssp             CCCSCCCSEECTTTCCE
T ss_pred             CccCCCCCEeCCCCccc
Confidence            58999999999999998

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.00024  Score=41.79  Aligned_cols=27  Identities=22%  Similarity=0.443  Sum_probs=25.7

Q ss_pred             eecCCCCcccCCCccchhhhhhccCCc
Q 046965          109 FSCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       109 f~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      |.|.+|+......+-|+.|++.|+++|
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            889999999999999999999999986

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.70  E-value=0.00022  Score=41.12  Aligned_cols=26  Identities=27%  Similarity=0.579  Sum_probs=24.8

Q ss_pred             ecCCCCcccCCCccchhhhhhccCCc
Q 046965          110 SCNYCKREFSTSQALGGHQNAHKQER  135 (286)
Q Consensus       110 ~C~~CgK~F~sssaL~~Hqr~HtgEK  135 (286)
                      +|+.|.|.|.++..|+.|-|.|+|||
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            69999999999999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.66  E-value=2.5e-05  Score=46.76  Aligned_cols=12  Identities=8%  Similarity=-0.042  Sum_probs=11.2

Q ss_pred             CccccccccCcc
Q 046965          134 ERAVAKRRQGVD  145 (286)
Q Consensus       134 EKpy~C~~Cgk~  145 (286)
                      ||||+|.+|+++
T Consensus         1 EKPy~C~~C~k~   12 (28)
T d1a1ia2           1 QKPFQCRICMRN   12 (28)
T ss_dssp             CCCEECTTTCCE
T ss_pred             CcCccCCCCcCE
Confidence            799999999998

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.62  E-value=0.00028  Score=40.10  Aligned_cols=24  Identities=42%  Similarity=0.902  Sum_probs=22.8

Q ss_pred             eecCCCCcccCCCccchhhhhhcc
Q 046965          109 FSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       109 f~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      |+|..|.++|..+++|.+|+++|+
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999986

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.53  E-value=2.9e-05  Score=45.75  Aligned_cols=11  Identities=9%  Similarity=-0.025  Sum_probs=10.3

Q ss_pred             ccccccccCcc
Q 046965          135 RAVAKRRQGVD  145 (286)
Q Consensus       135 Kpy~C~~Cgk~  145 (286)
                      |||+|.+|||+
T Consensus         1 KPy~C~eCgK~   11 (26)
T d1x6ea2           1 KPYKCLECGKA   11 (26)
T ss_dssp             CCEECSSSCCE
T ss_pred             CCccCCCCcCe
Confidence            79999999998

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.37  E-value=0.00044  Score=40.22  Aligned_cols=26  Identities=23%  Similarity=0.543  Sum_probs=24.7

Q ss_pred             ceeecCCCCcccCCCccchhhhhhcc
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      |||+|..|...-..+++|+.|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            79999999999999999999999995

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.31  E-value=0.00092  Score=40.13  Aligned_cols=28  Identities=29%  Similarity=0.679  Sum_probs=24.8

Q ss_pred             ceeecCC--CCcccCCCccchhhh-hhccCC
Q 046965          107 RVFSCNY--CKREFSTSQALGGHQ-NAHKQE  134 (286)
Q Consensus       107 Kpf~C~~--CgK~F~sssaL~~Hq-r~HtgE  134 (286)
                      |||.|.+  |.|.|+..+....|+ |+|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            6999998  999999999999998 788643

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.07  E-value=0.00084  Score=43.07  Aligned_cols=26  Identities=19%  Similarity=0.557  Sum_probs=23.5

Q ss_pred             CCCceeecCCCCcccCCCccchhhhh
Q 046965          104 SEARVFSCNYCKREFSTSQALGGHQN  129 (286)
Q Consensus       104 tgeKpf~C~~CgK~F~sssaL~~Hqr  129 (286)
                      ||-|||.|..|+|.|-...++.+|..
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            57899999999999999999999864

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.73  E-value=0.0016  Score=38.27  Aligned_cols=29  Identities=31%  Similarity=0.628  Sum_probs=27.0

Q ss_pred             CceeecCCCCcccCCCccchhhhhhccCC
Q 046965          106 ARVFSCNYCKREFSTSQALGGHQNAHKQE  134 (286)
Q Consensus       106 eKpf~C~~CgK~F~sssaL~~Hqr~HtgE  134 (286)
                      +..|.|..|...|...-.|..||-.|+||
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56799999999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.69  E-value=0.00047  Score=41.88  Aligned_cols=28  Identities=0%  Similarity=0.010  Sum_probs=23.4

Q ss_pred             Ccccc--CCccchhhccCCCCCcccccCCCc
Q 046965           79 RMSMM--NNNHCHEENNGHPTSSEKKSSEAR  107 (286)
Q Consensus        79 ~~tc~--~~g~S~~~~~~~~~~H~rtHtgeK  107 (286)
                      .|.|.  .||++|...+.+. .|+++|+|||
T Consensus         2 pf~C~~~~C~k~F~~~~~L~-~H~r~HtgeK   31 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQ-RHKRTHTGEK   31 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHH-HHHTTTSCCC
T ss_pred             cCCCcCCCCCcCcCChhHhh-hhcCcccccC
Confidence            46774  7999999988654 9999999986

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.63  E-value=0.0019  Score=38.04  Aligned_cols=28  Identities=29%  Similarity=0.657  Sum_probs=25.6

Q ss_pred             ceeecCC--CCcccCCCccchhhhhhccCC
Q 046965          107 RVFSCNY--CKREFSTSQALGGHQNAHKQE  134 (286)
Q Consensus       107 Kpf~C~~--CgK~F~sssaL~~Hqr~HtgE  134 (286)
                      |||.|.+  |.|.|.+-..|.+|...|+||
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5899986  999999999999999999986

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.41  E-value=0.0034  Score=36.99  Aligned_cols=28  Identities=29%  Similarity=0.676  Sum_probs=24.1

Q ss_pred             ceeecCCCCcccCCCccchhhhhh-ccCC
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNA-HKQE  134 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~-HtgE  134 (286)
                      |||.|.+|...-..+++|+.|.++ |..|
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhske   29 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccccccccccccchhhhhhhhcccccC
Confidence            699999999999999999999875 5444

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.39  E-value=0.0018  Score=37.91  Aligned_cols=25  Identities=28%  Similarity=0.656  Sum_probs=23.1

Q ss_pred             ceeecCC--CCcccCCCccchhhhhhc
Q 046965          107 RVFSCNY--CKREFSTSQALGGHQNAH  131 (286)
Q Consensus       107 Kpf~C~~--CgK~F~sssaL~~Hqr~H  131 (286)
                      .||+|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5899986  999999999999999987

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.30  E-value=0.0025  Score=37.80  Aligned_cols=27  Identities=15%  Similarity=0.565  Sum_probs=23.9

Q ss_pred             ceeecCC--CCcccCCCccchhhhhhccC
Q 046965          107 RVFSCNY--CKREFSTSQALGGHQNAHKQ  133 (286)
Q Consensus       107 Kpf~C~~--CgK~F~sssaL~~Hqr~Htg  133 (286)
                      |||.|..  |+|++...++|..|++.+.|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            6999988  99999999999999996543

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.23  E-value=0.00056  Score=41.28  Aligned_cols=27  Identities=0%  Similarity=-0.139  Sum_probs=23.0

Q ss_pred             CccccC--CccchhhccCCCCCcccccCCC
Q 046965           79 RMSMMN--NNHCHEENNGHPTSSEKKSSEA  106 (286)
Q Consensus        79 ~~tc~~--~g~S~~~~~~~~~~H~rtHtge  106 (286)
                      .|.|..  ||++|..++.+. .|+|+|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~-~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLK-THLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHH-HHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhh-hhcCcCcCC
Confidence            467877  999999998654 899999996

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.20  E-value=0.0024  Score=38.28  Aligned_cols=26  Identities=27%  Similarity=0.639  Sum_probs=22.9

Q ss_pred             eeecCCCCcccCCCccchhhh-hhccC
Q 046965          108 VFSCNYCKREFSTSQALGGHQ-NAHKQ  133 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hq-r~Htg  133 (286)
                      ||.|.+|++.|....-|.+|+ +.|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            799999999999999999996 46765

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.53  E-value=0.00053  Score=41.33  Aligned_cols=27  Identities=0%  Similarity=-0.151  Sum_probs=22.5

Q ss_pred             CccccC--CccchhhccCCCCCcccccCCC
Q 046965           79 RMSMMN--NNHCHEENNGHPTSSEKKSSEA  106 (286)
Q Consensus        79 ~~tc~~--~g~S~~~~~~~~~~H~rtHtge  106 (286)
                      .|.|..  ||++|..++.+. .|+|+||||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~-~H~r~HTGE   30 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLR-THVRIHTGD   30 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHH-HHHHHHHCC
T ss_pred             CccCCCCCCCceECcHHHcC-ccccccCCC
Confidence            467865  999999998654 999999986

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.86  E-value=0.0094  Score=34.85  Aligned_cols=23  Identities=30%  Similarity=0.715  Sum_probs=21.7

Q ss_pred             eeecCCCCcccCCCccchhhhhh
Q 046965          108 VFSCNYCKREFSTSQALGGHQNA  130 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr~  130 (286)
                      ||.|..|.-.|..+..|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            79999999999999999999975

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.73  E-value=0.0033  Score=38.25  Aligned_cols=15  Identities=13%  Similarity=0.107  Sum_probs=11.1

Q ss_pred             cccCCCCCCccCCCC
Q 046965          176 NRSLGVKMNSMIHKP  190 (286)
Q Consensus       176 ~r~lgl~~Hs~iHkp  190 (286)
                      .++-.|+.|.++|++
T Consensus        16 ~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_          16 VRNHDLIRHKKSHQE   30 (32)
T ss_dssp             SSSHHHHHHHGGGTC
T ss_pred             CCHHHHHHHhhhccC
Confidence            356668888888876

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.08  E-value=0.0035  Score=36.37  Aligned_cols=25  Identities=4%  Similarity=-0.053  Sum_probs=21.3

Q ss_pred             cccCCccchhhccCCCCCcccccCCC
Q 046965           81 SMMNNNHCHEENNGHPTSSEKKSSEA  106 (286)
Q Consensus        81 tc~~~g~S~~~~~~~~~~H~rtHtge  106 (286)
                      -|.+||++|-..+.++ +|+.+||||
T Consensus         4 vc~ecgkaf~essklk-rh~lvhtge   28 (28)
T d1ubdc2           4 VCAECGKAFVESSKLK-RHQLVHTGE   28 (28)
T ss_dssp             ECTTTCCEESSHHHHH-HHGGGTSCC
T ss_pred             hHHHHhHHHHHHHHHH-HHhhcccCC
Confidence            5999999999887655 899999986

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.74  E-value=0.014  Score=35.72  Aligned_cols=27  Identities=33%  Similarity=0.655  Sum_probs=21.0

Q ss_pred             eeecCC--CC---cccCCCccchhhhhhccCC
Q 046965          108 VFSCNY--CK---REFSTSQALGGHQNAHKQE  134 (286)
Q Consensus       108 pf~C~~--Cg---K~F~sssaL~~Hqr~HtgE  134 (286)
                      -|.|.+  |.   +.|.....|..|+|.||||
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            355554  55   4588899999999999986

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.57  E-value=0.018  Score=33.31  Aligned_cols=25  Identities=28%  Similarity=0.377  Sum_probs=23.0

Q ss_pred             eeecCCCCcccCCCccchhhhhhcc
Q 046965          108 VFSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      |-+|.+|..+.+++.+|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5689999999999999999999984

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.44  E-value=0.019  Score=35.90  Aligned_cols=28  Identities=25%  Similarity=0.633  Sum_probs=24.6

Q ss_pred             CCceeec--CCCCcccCCCccchhhhhhcc
Q 046965          105 EARVFSC--NYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       105 geKpf~C--~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      .+|||.|  +-|+.+|.+...|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4799999  569999999999999988774

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=91.83  E-value=0.02  Score=32.22  Aligned_cols=22  Identities=23%  Similarity=0.625  Sum_probs=20.6

Q ss_pred             eeecCCCCcccCCCccchhhhh
Q 046965          108 VFSCNYCKREFSTSQALGGHQN  129 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr  129 (286)
                      ||+|.-|...|-++..|..||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            8999999999999999999974

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.43  E-value=0.025  Score=33.07  Aligned_cols=24  Identities=33%  Similarity=0.710  Sum_probs=21.3

Q ss_pred             ceeecCCCCcccCCCccchhhhhh
Q 046965          107 RVFSCNYCKREFSTSQALGGHQNA  130 (286)
Q Consensus       107 Kpf~C~~CgK~F~sssaL~~Hqr~  130 (286)
                      +||+|.+|.---.+.++|..|++.
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHH
Confidence            699999999888899999999864

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.34  E-value=0.012  Score=34.65  Aligned_cols=25  Identities=8%  Similarity=-0.125  Sum_probs=20.3

Q ss_pred             CccccC--CccchhhccCCCCCcccccC
Q 046965           79 RMSMMN--NNHCHEENNGHPTSSEKKSS  104 (286)
Q Consensus        79 ~~tc~~--~g~S~~~~~~~~~~H~rtHt  104 (286)
                      .|.|..  ||++|...+.+. .|+|+||
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~-~H~r~HT   28 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLK-SHILTHA   28 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTH-HHHHHHC
T ss_pred             CcCCCCCCcCCcCCCHHHHH-HHHhhcc
Confidence            467875  999999988654 9999986

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.81  E-value=0.01  Score=33.77  Aligned_cols=25  Identities=4%  Similarity=0.056  Sum_probs=20.6

Q ss_pred             ccccCCccchhhccCCCCCcccccCC
Q 046965           80 MSMMNNNHCHEENNGHPTSSEKKSSE  105 (286)
Q Consensus        80 ~tc~~~g~S~~~~~~~~~~H~rtHtg  105 (286)
                      .+|.-|+++|+.+..++ .|||.|+|
T Consensus         2 hkc~~c~kcfsrkdklk-~hmr~htg   26 (26)
T d2dmda2           2 HKCEVCGKCFSRKDKLK-THMRCHTG   26 (26)
T ss_dssp             CCBTTTTBCCCCHHHHH-HHGGGCCC
T ss_pred             CccchhhhHhcchhHHH-HHhhccCC
Confidence            36889999999887654 89999986

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.08  E-value=0.005  Score=36.65  Aligned_cols=26  Identities=4%  Similarity=-0.086  Sum_probs=20.9

Q ss_pred             CccccC--CccchhhccCCCCCcccccCC
Q 046965           79 RMSMMN--NNHCHEENNGHPTSSEKKSSE  105 (286)
Q Consensus        79 ~~tc~~--~g~S~~~~~~~~~~H~rtHtg  105 (286)
                      .|.|..  |+++|...+.+ +.|+|+|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L-~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADL-TRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHH-HHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHh-hhhcCccCC
Confidence            467865  99999998865 489999986

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.87  E-value=0.021  Score=34.62  Aligned_cols=29  Identities=10%  Similarity=0.063  Sum_probs=23.6

Q ss_pred             cccCCccchhhccCCCCCcccccCCCceee
Q 046965           81 SMMNNNHCHEENNGHPTSSEKKSSEARVFS  110 (286)
Q Consensus        81 tc~~~g~S~~~~~~~~~~H~rtHtgeKpf~  110 (286)
                      .|..||+.|...- ++.+|...|++||||.
T Consensus         7 ~ce~cgk~frdvy-hlnrhklshs~ekpys   35 (35)
T d2epra1           7 ACEICGKIFRDVY-HLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             EETTTTEEESSHH-HHHHHGGGSCSCCCCC
T ss_pred             hHHHHHHHHHHHH-HHHhhhcccCCCCCCC
Confidence            6889999998653 4558889999999984

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=87.14  E-value=0.073  Score=30.48  Aligned_cols=22  Identities=23%  Similarity=0.513  Sum_probs=19.3

Q ss_pred             eeecCCCCcccCCCccchhhhh
Q 046965          108 VFSCNYCKREFSTSQALGGHQN  129 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr  129 (286)
                      ||+|..|||.+..+..|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            7899999999999999988853

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.06  E-value=0.074  Score=30.39  Aligned_cols=24  Identities=29%  Similarity=0.762  Sum_probs=20.9

Q ss_pred             eecCC--CCcccCCCccchhhhhhcc
Q 046965          109 FSCNY--CKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       109 f~C~~--CgK~F~sssaL~~Hqr~Ht  132 (286)
                      |.|.+  |+|.|.....|+.|+-.|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            66764  9999999999999998886

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.94  E-value=0.15  Score=33.32  Aligned_cols=25  Identities=24%  Similarity=0.699  Sum_probs=22.5

Q ss_pred             eeecCCCCcccCCCccchhhhhhcc
Q 046965          108 VFSCNYCKREFSTSQALGGHQNAHK  132 (286)
Q Consensus       108 pf~C~~CgK~F~sssaL~~Hqr~Ht  132 (286)
                      .|.|-.|+|.|.....|+.|...|-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            5889999999999999999987774