BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 046972
(483 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 182 bits (462), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/316 (33%), Positives = 177/316 (56%), Gaps = 12/316 (3%)
Query: 142 RISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE-DFIEKV 200
R SL+E+ + +D F+ +N++ G G VY+ L D AVK L E F +V
Sbjct: 27 RFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEV 86
Query: 201 EAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQ 260
E I H+NL++L G+C+ R+LVY Y+ NG++ L PL W R +I
Sbjct: 87 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 146
Query: 261 GTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRN 320
G+A+GLAYLH+ +PKI+H ++K++NILLD + + D GLAKL +
Sbjct: 147 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGT 206
Query: 321 SGYLAEEL--SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ----PQVFLIDWLKSM 374
G++A E +G++S EK+DV+ +G++++E+++G+ D ++ V L+DW+K +
Sbjct: 207 IGHIAPEYLSTGKSS---EKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 263
Query: 375 VAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLR- 433
+ ++K+ ++D L +E++++I +AL C RPKM +V+RMLE L R
Sbjct: 264 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERW 323
Query: 434 EEYRIKRAASY-HNYP 448
EE++ + NYP
Sbjct: 324 EEWQKEEMFRQDFNYP 339
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 181 bits (458), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 169/301 (56%), Gaps = 10/301 (3%)
Query: 142 RISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE-DFIEKV 200
R SL+E+ + +D F +N++ G G VY+ L D AVK L E F +V
Sbjct: 19 RFSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEV 78
Query: 201 EAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQ 260
E I H+NL++L G+C+ R+LVY Y+ NG++ L PL W R +I
Sbjct: 79 EMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIAL 138
Query: 261 GTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRN 320
G+A+GLAYLH+ +PKI+H ++K++NILLD + + D GLAKL +
Sbjct: 139 GSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGX 198
Query: 321 SGYLAEEL--SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ----PQVFLIDWLKSM 374
G++A E +G++S EK+DV+ +G++++E+++G+ D ++ V L+DW+K +
Sbjct: 199 IGHIAPEYLSTGKSS---EKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGL 255
Query: 375 VAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLRE 434
+ ++K+ ++D L +E++++I +AL C RPKM +V+RMLE L R
Sbjct: 256 LKEKKLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEGDGLAERW 315
Query: 435 E 435
E
Sbjct: 316 E 316
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 149 bits (375), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 161/291 (55%), Gaps = 13/291 (4%)
Query: 142 RISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVE 201
R+ L +++ T+ F + +I G G VY+ VL D + A+K S E+F ++E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 202 AIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQG 261
+ +H +LV L G+C E IL+Y+Y++NGNL++ L+GS ++W+ R++I G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 262 TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS 321
A+GL YLH I+H ++KS NILLD ++ PKI+D G++K G E + +
Sbjct: 148 AARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISK-KGTELGQTHLXXVVKG 203
Query: 322 --GYLAEE--LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQ--VFLIDWLKSMV 375
GY+ E + GR EKSDVYSFG+++ E++ R + S P+ V L +W
Sbjct: 204 TLGYIDPEYFIKGR---LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 376 AQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
++ ++DP L + + L++ A++C+ + RP MGDVL LE
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 148 bits (374), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 161/291 (55%), Gaps = 13/291 (4%)
Query: 142 RISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVE 201
R+ L +++ T+ F + +I G G VY+ VL D + A+K S E+F ++E
Sbjct: 28 RVPLVDLEEATNNFDHKFLIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIE 87
Query: 202 AIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQG 261
+ +H +LV L G+C E IL+Y+Y++NGNL++ L+GS ++W+ R++I G
Sbjct: 88 TLSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIG 147
Query: 262 TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS 321
A+GL YLH I+H ++KS NILLD ++ PKI+D G++K G E + +
Sbjct: 148 AARGLHYLHTR---AIIHRDVKSINILLDENFVPKITDFGISK-KGTELDQTHLXXVVKG 203
Query: 322 --GYLAEE--LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQ--VFLIDWLKSMV 375
GY+ E + GR EKSDVYSFG+++ E++ R + S P+ V L +W
Sbjct: 204 TLGYIDPEYFIKGR---LTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESH 260
Query: 376 AQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
++ ++DP L + + L++ A++C+ + RP MGDVL LE
Sbjct: 261 NNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKLE 311
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 132 bits (331), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 162/297 (54%), Gaps = 22/297 (7%)
Query: 143 ISLKEIDIVTDGFAEQ------NVIASGDNGVVYRAVLLDNMRAAVKLL--MSNSVSEE- 193
S E+ VT+ F E+ N + G GVVY+ ++N AVK L M + +EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 194 -EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTW 252
+ F ++++ + + +H+NLV+L G+ +G + LVY Y+ NG+L L L PL+W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSW 132
Query: 253 DTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGP-EWS 311
R KI QG A G+ +LHE+ +H ++KS+NILLD + KISD GLA+ +
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQT 189
Query: 312 ISTSCELRNSGYLA-EELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD-YSQPQVFLID 369
+ S + + Y+A E L G + KSD+YSFG++++EI++G VD + +PQ+ L
Sbjct: 190 VMXSRIVGTTAYMAPEALRGEIT---PKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 246
Query: 370 WLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
+ ++ I +D K+ + S ++ + +A +C+ RP + V ++L+
Sbjct: 247 KEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 131 bits (330), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 98/299 (32%), Positives = 161/299 (53%), Gaps = 26/299 (8%)
Query: 143 ISLKEIDIVTDGFAEQ------NVIASGDNGVVYRAVLLDNMRAAVKLL--MSNSVSEE- 193
S E+ VT+ F E+ N + G GVVY+ ++N AVK L M + +EE
Sbjct: 15 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 73
Query: 194 -EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTW 252
+ F ++++ + + +H+NLV+L G+ +G + LVY Y+ NG+L L L PL+W
Sbjct: 74 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSW 132
Query: 253 DTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSI 312
R KI QG A G+ +LHE+ +H ++KS+NILLD + KISD GLA+ E
Sbjct: 133 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR--ASEKFA 187
Query: 313 STSCELR---NSGYLA-EELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD-YSQPQVFL 367
T R + Y+A E L G + KSD+YSFG++++EI++G VD + +PQ+ L
Sbjct: 188 QTVMXXRIVGTTAYMAPEALRGEIT---PKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 244
Query: 368 IDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
+ ++ I +D K+ + S ++ + +A +C+ RP + V ++L+
Sbjct: 245 DIKEEIEDEEKTIEDYIDKKMNDADSTS-VEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 302
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 129 bits (324), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 160/299 (53%), Gaps = 26/299 (8%)
Query: 143 ISLKEIDIVTDGFAEQ------NVIASGDNGVVYRAVLLDNMRAAVKLL--MSNSVSEE- 193
S E+ VT+ F E+ N + G GVVY+ ++N AVK L M + +EE
Sbjct: 9 FSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 67
Query: 194 -EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTW 252
+ F ++++ + + +H+NLV+L G+ +G + LVY Y+ NG+L L L PL+W
Sbjct: 68 KQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSW 126
Query: 253 DTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSI 312
R KI QG A G+ +LHE+ +H ++KS+NILLD + KISD GLA+ E
Sbjct: 127 HMRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLAR--ASEKFA 181
Query: 313 STSCELR---NSGYLA-EELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD-YSQPQVFL 367
R + Y+A E L G + KSD+YSFG++++EI++G VD + +PQ+ L
Sbjct: 182 QXVMXXRIVGTTAYMAPEALRGEIT---PKSDIYSFGVVLLEIITGLPAVDEHREPQLLL 238
Query: 368 IDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
+ ++ I +D K+ + S ++ + +A +C+ RP + V ++L+
Sbjct: 239 DIKEEIEDEEKTIEDYIDKKMNDADS-TSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQ 296
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 126 bits (316), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 96/297 (32%), Positives = 155/297 (52%), Gaps = 22/297 (7%)
Query: 143 ISLKEIDIVTDGFAEQ------NVIASGDNGVVYRAVLLDNMRAAVKLL--MSNSVSEE- 193
S E+ VT+ F E+ N G GVVY+ ++N AVK L M + +EE
Sbjct: 6 FSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKG-YVNNTTVAVKKLAAMVDITTEEL 64
Query: 194 -EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTW 252
+ F ++++ + +H+NLV+L G+ +G + LVY Y NG+L L L PL+W
Sbjct: 65 KQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSW 123
Query: 253 DTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGP-EWS 311
R KI QG A G+ +LHE+ +H ++KS+NILLD + KISD GLA+
Sbjct: 124 HXRCKIAQGAANGINFLHENHH---IHRDIKSANILLDEAFTAKISDFGLARASEKFAQX 180
Query: 312 ISTSCELRNSGYLA-EELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD-YSQPQVFLID 369
+ S + + Y A E L G + KSD+YSFG++++EI++G VD + +PQ+ L
Sbjct: 181 VXXSRIVGTTAYXAPEALRGEIT---PKSDIYSFGVVLLEIITGLPAVDEHREPQLLLDI 237
Query: 370 WLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
+ ++ I +D K + S ++ +A +C+ RP + V ++L+
Sbjct: 238 KEEIEDEEKTIEDYIDKKXNDADS-TSVEAXYSVASQCLHEKKNKRPDIKKVQQLLQ 293
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 128/269 (47%), Gaps = 20/269 (7%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DFIEKVEAIGQVKHKNLVKLFGYC 218
I +G G V+RA AVK+LM E +F+ +V + +++H N+V G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+ N +V EY+ G+L + LH S G + L R+ + AKG+ YLH + P IV
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIV 161
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEK 338
H N+KS N+L+D + K+ D GL++L + +S+ ++A E+ R NEK
Sbjct: 162 HRNLKSPNLLVDKKYTVKVCDFGLSRLKASTF-LSSKSAAGTPEWMAPEVL-RDEPSNEK 219
Query: 339 SDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELK 398
SDVYSFG+++ E+ + + P W AQ A K E+P R
Sbjct: 220 SDVYSFGVILWELATLQQP------------WGNLNPAQVVAAVGFKCKRLEIP-RNLNP 266
Query: 399 RIILIALRCVDPDIKHRPKMGDVLRMLEP 427
++ I C + RP ++ +L P
Sbjct: 267 QVAAIIEGCWTNEPWKRPSFATIMDLLRP 295
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 123/269 (45%), Gaps = 20/269 (7%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DFIEKVEAIGQVKHKNLVKLFGYC 218
I +G G V+RA AVK+LM E +F+ +V + +++H N+V G
Sbjct: 45 IGAGSFGTVHRAEW-HGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV 103
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+ N +V EY+ G+L + LH S G + L R+ + AKG+ YLH + P IV
Sbjct: 104 TQPPNLSIVTEYLSRGSLYRLLHKS-GAREQLDERRRLSMAYDVAKGMNYLH-NRNPPIV 161
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEK 338
H ++KS N+L+D + K+ D GL++L + S E L S NEK
Sbjct: 162 HRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDEPS--NEK 219
Query: 339 SDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELK 398
SDVYSFG+++ E+ + + P W AQ A K E+P R
Sbjct: 220 SDVYSFGVILWELATLQQP------------WGNLNPAQVVAAVGFKCKRLEIP-RNLNP 266
Query: 399 RIILIALRCVDPDIKHRPKMGDVLRMLEP 427
++ I C + RP ++ +L P
Sbjct: 267 QVAAIIEGCWTNEPWKRPSFATIMDLLRP 295
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 110/201 (54%), Gaps = 11/201 (5%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
I SG G+V+ L+ + A+K + ++SEE DFIE+ E + ++ H LV+L+G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
LV+E++++G L +L G +T + + +G+AYL E ++H
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLE---EASVIHR 127
Query: 281 NMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++ + N L+ + K+SD G+ + + +++ ST + E S S ++ KS
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS--FSRYSSKS 185
Query: 340 DVYSFGILIMEIVS-GRLPVD 359
DV+SFG+L+ E+ S G++P +
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYE 206
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 110/201 (54%), Gaps = 11/201 (5%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
I SG G+V+ L+ + A+K + ++SEE DFIE+ E + ++ H LV+L+G C+E
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLE 71
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
LV+E++++G L +L G +T + + +G+AYL E ++H
Sbjct: 72 QAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEAC---VIHR 125
Query: 281 NMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++ + N L+ + K+SD G+ + + +++ ST + E S S ++ KS
Sbjct: 126 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS--FSRYSSKS 183
Query: 340 DVYSFGILIMEIVS-GRLPVD 359
DV+SFG+L+ E+ S G++P +
Sbjct: 184 DVWSFGVLMWEVFSEGKIPYE 204
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 110/201 (54%), Gaps = 11/201 (5%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
I SG G+V+ L+ + A+K + ++SEE DFIE+ E + ++ H LV+L+G C+E
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLE 73
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
LV+E++++G L +L G +T + + +G+AYL E ++H
Sbjct: 74 QAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEAC---VIHR 127
Query: 281 NMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++ + N L+ + K+SD G+ + + +++ ST + E S S ++ KS
Sbjct: 128 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS--FSRYSSKS 185
Query: 340 DVYSFGILIMEIVS-GRLPVD 359
DV+SFG+L+ E+ S G++P +
Sbjct: 186 DVWSFGVLMWEVFSEGKIPYE 206
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 110/201 (54%), Gaps = 11/201 (5%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
I SG G+V+ L+ + A+K + ++SEE DFIE+ E + ++ H LV+L+G C+E
Sbjct: 18 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLE 76
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
LV+E++++G L +L G +T + + +G+AYL E ++H
Sbjct: 77 QAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEAC---VIHR 130
Query: 281 NMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++ + N L+ + K+SD G+ + + +++ ST + E S S ++ KS
Sbjct: 131 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS--FSRYSSKS 188
Query: 340 DVYSFGILIMEIVS-GRLPVD 359
DV+SFG+L+ E+ S G++P +
Sbjct: 189 DVWSFGVLMWEVFSEGKIPYE 209
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 110/201 (54%), Gaps = 11/201 (5%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
I SG G+V+ L+ + A+K + S+SE+ DFIE+ E + ++ H LV+L+G C+E
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSED-DFIEEAEVMMKLSHPKLVQLYGVCLE 93
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
LV+E++++G L +L G +T + + +G+AYL E ++H
Sbjct: 94 QAPICLVFEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEAC---VIHR 147
Query: 281 NMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++ + N L+ + K+SD G+ + + +++ ST + E S S ++ KS
Sbjct: 148 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS--FSRYSSKS 205
Query: 340 DVYSFGILIMEIVS-GRLPVD 359
DV+SFG+L+ E+ S G++P +
Sbjct: 206 DVWSFGVLMWEVFSEGKIPYE 226
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 91/302 (30%), Positives = 142/302 (47%), Gaps = 55/302 (18%)
Query: 145 LKEIDIVTDGFAE---QNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVE 201
L EID FAE + +I G G VYRA + + AVK + +ED + +E
Sbjct: 1 LLEID-----FAELTLEEIIGIGGFGKVYRAFWIGD-EVAVKAARHDP---DEDISQTIE 51
Query: 202 AIGQ-------VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDT 254
+ Q +KH N++ L G C++ N LV E+ G L + L G K + D
Sbjct: 52 NVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSG-----KRIPPDI 106
Query: 255 RMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP--------KISDVGLAKLH 306
+ A+G+ YLH++ I+H ++KSSNIL+ KI+D GLA+
Sbjct: 107 LVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-- 164
Query: 307 GPEWSISTSCELRNS-GYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQV 365
EW +T + ++A E+ R S+F++ SDV+S+G+L+ E+++G +P
Sbjct: 165 --EWHRTTKMSAAGAYAWMAPEVI-RASMFSKGSDVWSYGVLLWELLTGEVPFRG----- 216
Query: 366 FLIDWLKSM--VAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLR 423
ID L VA K+A + PE P K ++ C +PD RP ++L
Sbjct: 217 --IDGLAVAYGVAMNKLALPIPSTCPE-PFAKLME-------DCWNPDPHSRPSFTNILD 266
Query: 424 ML 425
L
Sbjct: 267 QL 268
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 60/201 (29%), Positives = 109/201 (54%), Gaps = 11/201 (5%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
I SG G+V+ L+ + A+K + ++SEE DFIE+ E + ++ H LV+L+G C+E
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEE-DFIEEAEVMMKLSHPKLVQLYGVCLE 74
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
LV E++++G L +L G +T + + +G+AYL E ++H
Sbjct: 75 QAPICLVTEFMEHGCLSDYLRTQRG---LFAAETLLGMCLDVCEGMAYLEEAC---VIHR 128
Query: 281 NMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++ + N L+ + K+SD G+ + + +++ ST + E S S ++ KS
Sbjct: 129 DLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFS--FSRYSSKS 186
Query: 340 DVYSFGILIMEIVS-GRLPVD 359
DV+SFG+L+ E+ S G++P +
Sbjct: 187 DVWSFGVLMWEVFSEGKIPYE 207
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 141/297 (47%), Gaps = 57/297 (19%)
Query: 143 ISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAA-VKLLMSNSVSEEEDFIEKVE 201
I KEI++ + V+ G GVV +A RA V + S SE + FI ++
Sbjct: 5 IDYKEIEV-------EEVVGRGAFGVVCKA----KWRAKDVAIKQIESESERKAFIVELR 53
Query: 202 AIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTR---MKI 258
+ +V H N+VKL+G C+ LV EY + G+L LHG A+PL + T M
Sbjct: 54 QLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHG----AEPLPYYTAAHAMSW 107
Query: 259 IQGTAKGLAYLHEDIEPK-IVHHNMKSSNILLDHHWNP-KISDVGLAKLHGPEWSISTSC 316
++G+AYLH ++PK ++H ++K N+LL KI D G T+C
Sbjct: 108 CLQCSQGVAYLH-SMQPKALIHRDLKPPNLLLVAGGTVLKICDFG------------TAC 154
Query: 317 ELR--------NSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLI 368
+++ ++ ++A E+ S ++EK DV+S+GI++ E+++ R P D F I
Sbjct: 155 DIQTHMTNNKGSAAWMAPEVF-EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI 213
Query: 369 DWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRML 425
W + P + +P K I + RC D RP M ++++++
Sbjct: 214 MWAVHNGTR-------PPLIKNLP-----KPIESLMTRCWSKDPSQRPSMEEIVKIM 258
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 88.6 bits (218), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 141/297 (47%), Gaps = 57/297 (19%)
Query: 143 ISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAA-VKLLMSNSVSEEEDFIEKVE 201
I KEI++ + V+ G GVV +A RA V + S SE + FI ++
Sbjct: 6 IDYKEIEV-------EEVVGRGAFGVVCKA----KWRAKDVAIKQIESESERKAFIVELR 54
Query: 202 AIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTR---MKI 258
+ +V H N+VKL+G C+ LV EY + G+L LHG A+PL + T M
Sbjct: 55 QLSRVNHPNIVKLYGACL--NPVCLVMEYAEGGSLYNVLHG----AEPLPYYTAAHAMSW 108
Query: 259 IQGTAKGLAYLHEDIEPK-IVHHNMKSSNILLDHHWNP-KISDVGLAKLHGPEWSISTSC 316
++G+AYLH ++PK ++H ++K N+LL KI D G T+C
Sbjct: 109 CLQCSQGVAYLH-SMQPKALIHRDLKPPNLLLVAGGTVLKICDFG------------TAC 155
Query: 317 ELR--------NSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLI 368
+++ ++ ++A E+ S ++EK DV+S+GI++ E+++ R P D F I
Sbjct: 156 DIQTHMTNNKGSAAWMAPEVF-EGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRI 214
Query: 369 DWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRML 425
W + P + +P K I + RC D RP M ++++++
Sbjct: 215 MWAVHNGTR-------PPLIKNLP-----KPIESLMTRCWSKDPSQRPSMEEIVKIM 259
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/298 (26%), Positives = 148/298 (49%), Gaps = 37/298 (12%)
Query: 158 QNVIASGDNGVVYRAVLLDN-----MRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNL 211
Q VI +G+ G VY+ +L + + A+K L + ++ DF+ + +GQ H N+
Sbjct: 49 QKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHE 271
++L G + + +++ EY++NG L ++L GE L + +++G A G+ YL
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL---VGMLRGIAAGMKYLA- 164
Query: 272 DIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLA-EEL 328
VH ++ + NIL++ + K+SD GL+++ PE + +TS + A E +
Sbjct: 165 --NMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVS-GRLPV-DYSQPQVFLIDWLKSMVAQQKIAYVLDP 386
S R F SDV+SFGI++ E+++ G P + S +V +K++ ++ +D
Sbjct: 223 SYRK--FTSASDVWSFGIVMWEVMTYGERPYWELSNHEV-----MKAINDGFRLPTPMD- 274
Query: 387 KLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASY 444
PS I + ++C + RPK D++ +L D L+R +K A +
Sbjct: 275 ----CPS-----AIYQLMMQCWQQERARRPKFADIVSIL---DKLIRAPDSLKTLADF 320
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 110/204 (53%), Gaps = 16/204 (7%)
Query: 158 QNVIASGDNG-VVYRAVLLDNMR---AAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLV 212
+ +I SGD+G V Y + + R A+K L + + DF+ + +GQ H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 213 KLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+L G G+ ++V EY++NG+L +L G+ T + +++G G+ YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ---FTIMQLVGMLRGVGAGMRYLS-- 168
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLA-EELS 329
+ VH ++ + N+L+D + K+SD GL+++ P+ + +T+ + A E ++
Sbjct: 169 -DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIA 227
Query: 330 GRTSIFNEKSDVYSFGILIMEIVS 353
RT F+ SDV+SFG+++ E+++
Sbjct: 228 FRT--FSSASDVWSFGVVMWEVLA 249
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 110/204 (53%), Gaps = 16/204 (7%)
Query: 158 QNVIASGDNG-VVYRAVLLDNMR---AAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLV 212
+ +I SGD+G V Y + + R A+K L + + DF+ + +GQ H N++
Sbjct: 54 EKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNII 113
Query: 213 KLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+L G G+ ++V EY++NG+L +L G+ T + +++G G+ YL
Sbjct: 114 RLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ---FTIMQLVGMLRGVGAGMRYLS-- 168
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLA-EELS 329
+ VH ++ + N+L+D + K+SD GL+++ P+ + +T+ + A E ++
Sbjct: 169 -DLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIA 227
Query: 330 GRTSIFNEKSDVYSFGILIMEIVS 353
RT F+ SDV+SFG+++ E+++
Sbjct: 228 FRT--FSSASDVWSFGVVMWEVLA 249
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 138/281 (49%), Gaps = 39/281 (13%)
Query: 161 IASGDNGVVYRAVLL-DNMRAAVKLLMSNSVSEEEDFIEKVEA-------IGQVKHKNLV 212
I G G+V++ L+ D A+K L+ E + IEK + + + H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 213 KLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
KL+G + R +V E++ G+L H L +A P+ W +++++ A G+ Y+ ++
Sbjct: 87 KLYG-LMHNPPR-MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QN 140
Query: 273 IEPKIVHHNMKSSNILL-----DHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
P IVH +++S NI L + K++D GL++ + S S L N ++A E
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ----QSVHSVSGLLGNFQWMAPE 196
Query: 328 LSG-RTSIFNEKSDVYSFGILIMEIVSGRLPVD-YSQPQVFLIDWLKSMVAQQKIAYVLD 385
G + EK+D YSF +++ I++G P D YS ++ I+ M+ ++ L
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN----MIREEG----LR 248
Query: 386 PKLPE-MPSRKELKRIILIALRCVDPDIKHRPKMGDVLRML 425
P +PE P R L+ +I + C D K RP +++ L
Sbjct: 249 PTIPEDCPPR--LRNVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ + + AVK L S+S + F+ + + Q++H+ LV+L Y V
Sbjct: 17 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 73
Query: 221 GQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
Q I ++ EY++NG+L +L G LT + + + A+G+A++ E +H
Sbjct: 74 TQEPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIH 128
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAEELSGRTSIFNEK 338
N++++NIL+ + KI+D GLA+L E++ + E ++ T F K
Sbjct: 129 RNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT--FTIK 186
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ EIV+ GR+P
Sbjct: 187 SDVWSFGILLTEIVTHGRIP 206
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 106/211 (50%), Gaps = 14/211 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ SG GVV AVK++ S+SE+E F ++ + + ++ H LVK +G C +
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDE-FFQEAQTMMKLSHPKLVKFYGVCSK 74
Query: 221 GQNRILVYEYIDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+V EYI NG L +L HG E L +++ +G+A+L + +
Sbjct: 75 EYPIYIVTEYISNGCLLNYLRSHGKGLEPSQL-----LEMCYDVCEGMAFLESH---QFI 126
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEK 338
H ++ + N L+D K+SD G+ + + +S+ + A E+ ++ K
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFK-YSSK 185
Query: 339 SDVYSFGILIMEIVS-GRLPVD-YSQPQVFL 367
SDV++FGIL+ E+ S G++P D Y+ +V L
Sbjct: 186 SDVWAFGILMWEVFSLGKMPYDLYTNSEVVL 216
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 105/200 (52%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ N + A+K L ++S E F+E+ + + ++KH LV+L+ E
Sbjct: 17 LGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQLYAVVSE 75
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY++ G+L +L GE + L + + A G+AY+ +H
Sbjct: 76 -EPIYIVTEYMNKGSLLDFLKD--GEGRALKLPNLVDMAAQVAAGMAYIERM---NYIHR 129
Query: 281 NMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE--LSGRTSIFNEK 338
+++S+NIL+ + KI+D GLA+L + + A E L GR +I K
Sbjct: 130 DLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI---K 186
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+V+ GR+P
Sbjct: 187 SDVWSFGILLTELVTKGRVP 206
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 79.0 bits (193), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 137/281 (48%), Gaps = 39/281 (13%)
Query: 161 IASGDNGVVYRAVLL-DNMRAAVKLLMSNSVSEEEDFIEKVEA-------IGQVKHKNLV 212
I G G+V++ L+ D A+K L+ E + IEK + + + H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 213 KLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
KL+G + R +V E++ G+L H L +A P+ W +++++ A G+ Y+ ++
Sbjct: 87 KLYG-LMHNPPR-MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QN 140
Query: 273 IEPKIVHHNMKSSNILL-----DHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
P IVH +++S NI L + K++D G ++ + S S L N ++A E
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ----QSVHSVSGLLGNFQWMAPE 196
Query: 328 LSG-RTSIFNEKSDVYSFGILIMEIVSGRLPVD-YSQPQVFLIDWLKSMVAQQKIAYVLD 385
G + EK+D YSF +++ I++G P D YS ++ I+ M+ ++ L
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN----MIREEG----LR 248
Query: 386 PKLPE-MPSRKELKRIILIALRCVDPDIKHRPKMGDVLRML 425
P +PE P R L+ +I + C D K RP +++ L
Sbjct: 249 PTIPEDCPPR--LRNVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 78.6 bits (192), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ + + AVK L S+S + F+ + + Q++H+ LV+L Y V
Sbjct: 31 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 87
Query: 221 GQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
Q I ++ EY++NG+L +L G LT + + + A+G+A++ E +H
Sbjct: 88 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 142
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAEELSGRTSIFNEK 338
+++++NIL+ + KI+D GLA+L E++ + E ++ T F K
Sbjct: 143 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT--FTIK 200
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ EIV+ GR+P
Sbjct: 201 SDVWSFGILLTEIVTHGRIP 220
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ + + AVK L S+S + F+ + + Q++H+ LV+L Y V
Sbjct: 21 LGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 221 GQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
Q I ++ EY++NG+L +L G LT + + + A+G+A++ E +H
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKL---------HGPEWSIS-TSCELRNSGYLAEELS 329
+++++NIL+ + KI+D GLA+L G ++ I T+ E N G
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYG------- 185
Query: 330 GRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
F KSDV+SFGIL+ EIV+ GR+P
Sbjct: 186 ----TFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ + + AVK L S+S + F+ + + Q++H+ LV+L Y V
Sbjct: 26 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 82
Query: 221 GQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
Q I ++ EY++NG+L +L G LT + + + A+G+A++ E +H
Sbjct: 83 TQEPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIH 137
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAEELSGRTSIFNEK 338
+++++NIL+ + KI+D GLA+L E++ + E ++ T F K
Sbjct: 138 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT--FTIK 195
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ EIV+ GR+P
Sbjct: 196 SDVWSFGILLTEIVTHGRIP 215
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ + + AVK L S+S + F+ + + Q++H+ LV+L Y V
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 83
Query: 221 GQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
Q I ++ EY++NG+L +L G LT + + + A+G+A++ E +H
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIH 138
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAEELSGRTSIFNEK 338
+++++NIL+ + KI+D GLA+L E++ + E ++ T F K
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT--FTIK 196
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ EIV+ GR+P
Sbjct: 197 SDVWSFGILLTEIVTHGRIP 216
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ + + AVK L S+S + F+ + + Q++H+ LV+L Y V
Sbjct: 16 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 72
Query: 221 GQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
Q I ++ EY++NG+L +L G LT + + + A+G+A++ E +H
Sbjct: 73 TQEPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIH 127
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAEELSGRTSIFNEK 338
+++++NIL+ + KI+D GLA+L E++ + E ++ T F K
Sbjct: 128 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT--FTIK 185
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ EIV+ GR+P
Sbjct: 186 SDVWSFGILLTEIVTHGRIP 205
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 78.2 bits (191), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 137/281 (48%), Gaps = 39/281 (13%)
Query: 161 IASGDNGVVYRAVLL-DNMRAAVKLLMSNSVSEEEDFIEKVEA-------IGQVKHKNLV 212
I G G+V++ L+ D A+K L+ E + IEK + + + H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 213 KLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
KL+G + R +V E++ G+L H L +A P+ W +++++ A G+ Y+ ++
Sbjct: 87 KLYG-LMHNPPR-MVMEFVPCGDL---YHRLLDKAHPIKWSVKLRLMLDIALGIEYM-QN 140
Query: 273 IEPKIVHHNMKSSNILL-----DHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
P IVH +++S NI L + K++D L++ + S S L N ++A E
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ----QSVHSVSGLLGNFQWMAPE 196
Query: 328 LSG-RTSIFNEKSDVYSFGILIMEIVSGRLPVD-YSQPQVFLIDWLKSMVAQQKIAYVLD 385
G + EK+D YSF +++ I++G P D YS ++ I+ M+ ++ L
Sbjct: 197 TIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFIN----MIREEG----LR 248
Query: 386 PKLPE-MPSRKELKRIILIALRCVDPDIKHRPKMGDVLRML 425
P +PE P R L+ +I + C D K RP +++ L
Sbjct: 249 PTIPEDCPPR--LRNVIEL---CWSGDPKKRPHFSYIVKEL 284
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ + + AVK L S+S + F+ + + Q++H+ LV+L Y V
Sbjct: 30 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 86
Query: 221 GQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
Q I ++ EY++NG+L +L G LT + + + A+G+A++ E +H
Sbjct: 87 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 141
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKL---------HGPEWSIS-TSCELRNSGYLAEELS 329
+++++NIL+ + KI+D GLA+L G ++ I T+ E N G
Sbjct: 142 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG------- 194
Query: 330 GRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
F KSDV+SFGIL+ EIV+ GR+P
Sbjct: 195 ----TFTIKSDVWSFGILLTEIVTHGRIP 219
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ + + AVK L S+S + F+ + + Q++H+ LV+L Y V
Sbjct: 27 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 83
Query: 221 GQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
Q I ++ EY++NG+L +L G LT + + + A+G+A++ E +H
Sbjct: 84 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 138
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKL---------HGPEWSIS-TSCELRNSGYLAEELS 329
+++++NIL+ + KI+D GLA+L G ++ I T+ E N G
Sbjct: 139 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG------- 191
Query: 330 GRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
F KSDV+SFGIL+ EIV+ GR+P
Sbjct: 192 ----TFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ + + AVK L S+S + F+ + + Q++H+ LV+L Y V
Sbjct: 29 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 85
Query: 221 GQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
Q I ++ EY++NG+L +L G LT + + + A+G+A++ E +H
Sbjct: 86 TQEPIYIITEYMENGSLVDFLKTPSGIK--LTINKLLDMAAQIAEGMAFIEER---NYIH 140
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKL---------HGPEWSIS-TSCELRNSGYLAEELS 329
+++++NIL+ + KI+D GLA+L G ++ I T+ E N G
Sbjct: 141 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG------- 193
Query: 330 GRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
F KSDV+SFGIL+ EIV+ GR+P
Sbjct: 194 ----TFTIKSDVWSFGILLTEIVTHGRIP 218
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 62/200 (31%), Positives = 108/200 (54%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ + + AVK L S+S + F+ + + Q++H+ LV+L Y V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 221 GQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
Q I ++ EY++NG+L +L G LT + + + A+G+A++ E +H
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAEELSGRTSIFNEK 338
+++++NIL+ + KI+D GLA+L E++ + E ++ T F K
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGT--FTIK 190
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ EIV+ GR+P
Sbjct: 191 SDVWSFGILLTEIVTHGRIP 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ + + AVK L S+S + F+ + + Q++H+ LV+L Y V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 221 GQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
Q I ++ EY++NG+L +L G LT + + + A+G+A++ E +H
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKL---------HGPEWSIS-TSCELRNSGYLAEELS 329
+++++NIL+ + KI+D GLA+L G ++ I T+ E N G
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG------- 185
Query: 330 GRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
F KSDV+SFGIL+ EIV+ GR+P
Sbjct: 186 ----TFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY++ G+L +L G G K L + + A G+AY+ VH
Sbjct: 82 -EPIYIVTEYMNKGSLLDFLKGETG--KYLRLPQLVDMSAQIASGMAYVERM---NYVHR 135
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L EW+ + E L GR +I K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTI---K 192
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 193 SDVWSFGILLTELTTKGRVP 212
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ + + AVK L S+S + F+ + + Q++H+ LV+L Y V
Sbjct: 23 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 79
Query: 221 GQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
Q I ++ EY++NG+L +L G LT + + + A+G+A++ E +H
Sbjct: 80 TQEPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIH 134
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKL---------HGPEWSIS-TSCELRNSGYLAEELS 329
+++++NIL+ + KI+D GLA+L G ++ I T+ E N G
Sbjct: 135 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG------- 187
Query: 330 GRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
F KSDV+SFGIL+ EIV+ GR+P
Sbjct: 188 ----TFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 142/315 (45%), Gaps = 40/315 (12%)
Query: 140 GIRISLKEIDIVTDGFAEQNVIASGDNGVVYRAVL-LDNMR---AAVKLLMSNSVSEEE- 194
+R KEIDI + VI +G+ G V L L R A+K L S ++
Sbjct: 22 AVREFAKEIDISC--VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRR 79
Query: 195 DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDT 254
DF+ + +GQ H N++ L G + +++ E+++NG+L +L + G+ T
Sbjct: 80 DFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ---FTVIQ 136
Query: 255 RMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL-----HGPE 309
+ +++G A G+ YL + VH ++ + NIL++ + K+SD GL++ P
Sbjct: 137 LVGMLRGIAAGMKYLA---DMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPT 193
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLI 368
++ + ++ E + R F SDV+S+GI++ E++S G P
Sbjct: 194 YTSALGGKIPIRWTAPEAIQYRK--FTSASDVWSYGIVMWEVMSYGERPY---------- 241
Query: 369 DWLKSMVAQQKI-AYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEP 427
W M Q I A D +LP P + + L C D HRPK G ++ L
Sbjct: 242 -W--DMTNQDVINAIEQDYRLP--PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL-- 294
Query: 428 RDLLLREEYRIKRAA 442
D ++R +K A
Sbjct: 295 -DKMIRNPNSLKAMA 308
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ + + AVK L S+S + F+ + + Q++H+ LV+L Y V
Sbjct: 22 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 78
Query: 221 GQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
Q I ++ EY++NG+L +L G LT + + + A+G+A++ E +H
Sbjct: 79 TQEPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIH 133
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKL---------HGPEWSIS-TSCELRNSGYLAEELS 329
+++++NIL+ + KI+D GLA+L G ++ I T+ E N G
Sbjct: 134 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG------- 186
Query: 330 GRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
F KSDV+SFGIL+ EIV+ GR+P
Sbjct: 187 ----TFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/209 (31%), Positives = 109/209 (52%), Gaps = 31/209 (14%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ + + AVK L S+S + F+ + + Q++H+ LV+L Y V
Sbjct: 21 LGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDA-FLAEANLMKQLQHQRLVRL--YAVV 77
Query: 221 GQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
Q I ++ EY++NG+L +L G LT + + + A+G+A++ E +H
Sbjct: 78 TQEPIYIITEYMENGSLVDFLKTPSG--IKLTINKLLDMAAQIAEGMAFIEER---NYIH 132
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKL---------HGPEWSIS-TSCELRNSGYLAEELS 329
+++++NIL+ + KI+D GLA+L G ++ I T+ E N G
Sbjct: 133 RDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYG------- 185
Query: 330 GRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
F KSDV+SFGIL+ EIV+ GR+P
Sbjct: 186 ----TFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 76.6 bits (187), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 43/208 (20%)
Query: 176 DNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
D M AVK L S S +DF + E + ++H+++V+ FG C EG+ ++V+EY+ +G+
Sbjct: 41 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 100
Query: 236 LQQWLHGSLGEAK-----------PLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
L ++L +AK PL + + A G+ YL VH ++ +
Sbjct: 101 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLAT 157
Query: 285 SNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSI---------- 334
N L+ KI D G+++ ++ ++ Y + GRT +
Sbjct: 158 RNCLVGQGLVVKIGDFGMSR------------DIYSTDYY--RVGGRTMLPIRWMPPESI 203
Query: 335 ----FNEKSDVYSFGILIMEIVS-GRLP 357
F +SDV+SFG+++ EI + G+ P
Sbjct: 204 LYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 43/208 (20%)
Query: 176 DNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
D M AVK L S S +DF + E + ++H+++V+ FG C EG+ ++V+EY+ +G+
Sbjct: 47 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 106
Query: 236 LQQWLHGSLGEAK-----------PLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
L ++L +AK PL + + A G+ YL VH ++ +
Sbjct: 107 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLAT 163
Query: 285 SNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSI---------- 334
N L+ KI D G+++ ++ ++ Y + GRT +
Sbjct: 164 RNCLVGQGLVVKIGDFGMSR------------DIYSTDYY--RVGGRTMLPIRWMPPESI 209
Query: 335 ----FNEKSDVYSFGILIMEIVS-GRLP 357
F +SDV+SFG+++ EI + G+ P
Sbjct: 210 LYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKIRHEKLVQLYAVVSE 84
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G+L +L G +G K L + + A G+AY+ VH
Sbjct: 85 -EPIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L E++ + E L GR +I K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 195
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 127/270 (47%), Gaps = 21/270 (7%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
I SG G VY+ ++ + ++ + + + F +V + + +H N++ GY +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYMTK 103
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
N +V ++ + +L + LH + E K + + I + TA+G+ YLH I+H
Sbjct: 104 -DNLAIVTQWCEGSSLYKHLH--VQETKFQMFQL-IDIARQTAQGMDYLHAK---NIIHR 156
Query: 281 NMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--YLAEEL--SGRTSIFN 336
+MKS+NI L KI D GLA + WS S E ++A E+ + F+
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKS-RWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFS 215
Query: 337 EKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKE 396
+SDVYS+GI++ E+++G LP + + D + MV + + L P K
Sbjct: 216 FQSDVYSYGIVLYELMTGELPYSHINNR----DQIIFMVGRGYASPDLSKLYKNCP--KA 269
Query: 397 LKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
+KR++ CV + RP +L +E
Sbjct: 270 MKRLV---ADCVKKVKEERPLFPQILSSIE 296
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 97/208 (46%), Gaps = 43/208 (20%)
Query: 176 DNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
D M AVK L S S +DF + E + ++H+++V+ FG C EG+ ++V+EY+ +G+
Sbjct: 70 DKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGD 129
Query: 236 LQQWLHGSLGEAK-----------PLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
L ++L +AK PL + + A G+ YL VH ++ +
Sbjct: 130 LNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVAAGMVYL---AGLHFVHRDLAT 186
Query: 285 SNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSI---------- 334
N L+ KI D G+++ ++ ++ Y + GRT +
Sbjct: 187 RNCLVGQGLVVKIGDFGMSR------------DIYSTDYY--RVGGRTMLPIRWMPPESI 232
Query: 335 ----FNEKSDVYSFGILIMEIVS-GRLP 357
F +SDV+SFG+++ EI + G+ P
Sbjct: 233 LYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 99/200 (49%), Gaps = 29/200 (14%)
Query: 176 DNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
D + AVK L S + +DF + E + ++H+++VK +G CVEG I+V+EY+ +G+
Sbjct: 42 DKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGD 101
Query: 236 LQQWL--HGS----LGEAKP---LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSN 286
L ++L HG + E P LT + I Q A G+ YL VH ++ + N
Sbjct: 102 LNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAGMVYLASQ---HFVHRDLATRN 158
Query: 287 ILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA--------EELSGRTSIFNEK 338
L+ + KI D G+++ + ++ R G+ E + R F +
Sbjct: 159 CLVGENLLVKIGDFGMSR------DVYSTDYYRVGGHTMLPIRWMPPESIMYRK--FTTE 210
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+S G+++ EI + G+ P
Sbjct: 211 SDVWSLGVVLWEIFTYGKQP 230
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 110/211 (52%), Gaps = 28/211 (13%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ A + + AVK + S+S E F+ + + ++H LVKL V
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA-VVT 247
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAK---GLAYLHEDIEPKI 277
+ ++ E++ G+L +L G +PL K+I +A+ G+A++ +
Sbjct: 248 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP-----KLIDFSAQIAEGMAFIEQR---NY 299
Query: 278 VHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSIS-TSCELRNSGYLAEELSGRTSIFN 336
+H +++++NIL+ KI+D GLA++ G ++ I T+ E N G F
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARV-GAKFPIKWTAPEAINFGS-----------FT 347
Query: 337 EKSDVYSFGILIMEIVS-GRLPV-DYSQPQV 365
KSDV+SFGIL+MEIV+ GR+P S P+V
Sbjct: 348 IKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 378
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 75
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G+L +L G +G K L + + A G+AY+ VH
Sbjct: 76 -EPIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHR 129
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L E++ + E L GR +I K
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 186
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 187 SDVWSFGILLTELTTKGRVP 206
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 75.9 bits (185), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 73
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G+L +L G +G K L + + A G+AY+ VH
Sbjct: 74 -EPIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHR 127
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L E++ + E L GR +I K
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 184
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 185 SDVWSFGILLTELTTKGRVP 204
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G+L +L G +G K L + + A G+AY+ VH
Sbjct: 85 -EPIYIVIEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L E++ + E L GR +I K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 195
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G+L +L G +G K L + + A G+AY+ VH
Sbjct: 85 -EPIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L E++ + E L GR +I K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 195
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G+L +L G +G K L + + A G+AY+ VH
Sbjct: 85 -EPIYIVCEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L E++ + E L GR +I K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 195
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 75.5 bits (184), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/309 (26%), Positives = 139/309 (44%), Gaps = 40/309 (12%)
Query: 146 KEIDIVTDGFAEQNVIASGDNGVVYRAVL-LDNMR---AAVKLLMSNSVSEEE-DFIEKV 200
KEIDI + VI +G+ G V L L R A+K L S ++ DF+ +
Sbjct: 2 KEIDISC--VKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEA 59
Query: 201 EAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQ 260
+GQ H N++ L G + +++ E+++NG+L +L + G+ T + +++
Sbjct: 60 SIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ---FTVIQLVGMLR 116
Query: 261 GTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL-----HGPEWSISTS 315
G A G+ YL + VH + + NIL++ + K+SD GL++ P ++ +
Sbjct: 117 GIAAGMKYLA---DMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 173
Query: 316 CELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSM 374
++ E + R F SDV+S+GI++ E++S G P W M
Sbjct: 174 GKIPIRWTAPEAIQYRK--FTSASDVWSYGIVMWEVMSYGERPY-----------W--DM 218
Query: 375 VAQQKI-AYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLR 433
Q I A D +LP P + + L C D HRPK G ++ L D ++R
Sbjct: 219 TNQDVINAIEQDYRLP--PPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTL---DKMIR 273
Query: 434 EEYRIKRAA 442
+K A
Sbjct: 274 NPNSLKAMA 282
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 74.7 bits (182), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G L +L G +G K L + + A G+AY+ VH
Sbjct: 85 -EPIYIVMEYMSKGCLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L E++ + E L GR +I K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 195
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G+L +L G +G K L + + A G+AY+ VH
Sbjct: 85 -EPIYIVIEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 281 NMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE--LSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L + + A E L GR +I K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI---K 195
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G L +L G +G K L + + A G+AY+ VH
Sbjct: 85 -EPIYIVTEYMSKGCLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L E++ + E L GR +I K
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 195
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 134/274 (48%), Gaps = 29/274 (10%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DFIEKVEAIGQVKHKNLVKLFGYC 218
I SG G VY+ ++ AVK+L + + ++ F +V + + +H N++ GY
Sbjct: 20 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 77
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+ Q I V ++ + +L LH S E K + I + TA+G+ YLH I+
Sbjct: 78 TKPQLAI-VTQWCEGSSLYHHLHAS--ETK-FEMKKLIDIARQTARGMDYLHAK---SII 130
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--YLAEEL--SGRTSI 334
H ++KS+NI L KI D GLA + WS S E + ++A E+ ++
Sbjct: 131 HRDLKSNNIFLHEDNTVKIGDFGLATVKS-RWSGSHQFEQLSGSILWMAPEVIRMQDSNP 189
Query: 335 FNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSR 394
++ +SDVY+FGI++ E+++G+LP YS + D + MV + L P L ++ S
Sbjct: 190 YSFQSDVYAFGIVLYELMTGQLP--YS--NINNRDQIIEMVGRGS----LSPDLSKVRSN 241
Query: 395 --KELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
K +KR++ C+ RP +L +E
Sbjct: 242 CPKRMKRLM---AECLKKKRDERPSFPRILAEIE 272
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 84
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G+L +L G +G K L + + A G+AY+ VH
Sbjct: 85 -EPIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHR 138
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
++ ++NIL+ + K++D GLA+L E++ + E L GR +I K
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 195
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 196 SDVWSFGILLTELTTKGRVP 215
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 333
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G+L +L G G K L + + A G+AY+ VH
Sbjct: 334 -EPIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHR 387
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L E++ + E L GR +I K
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 444
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 445 SDVWSFGILLTELTTKGRVP 464
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 77
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G+L +L G G K L + + A G+AY+ VH
Sbjct: 78 -EPIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHR 131
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L E++ + E L GR +I K
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 188
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 189 SDVWSFGILLTELTTKGRVP 208
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 81
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY++ G+L +L G G K L + + A G+AY+ VH
Sbjct: 82 -EPIYIVTEYMNKGSLLDFLKGETG--KYLRLPQLVDMSAQIASGMAYVERM---NYVHR 135
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L E++ + E L GR +I K
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 192
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 193 SDVWSFGILLTELTTKGRVP 212
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G+L +L G G K L + + A G+AY+ VH
Sbjct: 251 -EPIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L E++ + E L GR +I K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 361
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G+L +L G G K L + + A G+AY+ VH
Sbjct: 251 -EPIYIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L E++ + E L GR +I K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 361
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 102/200 (51%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 74
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G+L +L G G K L + + A G+AY+ VH
Sbjct: 75 -EPIXIVTEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVERM---NYVHR 128
Query: 281 NMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE--LSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L + + A E L GR +I K
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTI---K 185
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 186 SDVWSFGILLTELTTKGRVP 205
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 109/211 (51%), Gaps = 18/211 (8%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ A + + AVK + S+S E F+ + + ++H LVKL V
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA-VVT 80
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAK---GLAYLHEDIEPKI 277
+ ++ E++ G+L +L G +PL K+I +A+ G+A++ +
Sbjct: 81 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP-----KLIDFSAQIAEGMAFIEQR---NY 132
Query: 278 VHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFN 336
+H +++++NIL+ KI+D GLA+ + E++ + E ++ + F
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS--FT 190
Query: 337 EKSDVYSFGILIMEIVS-GRLPV-DYSQPQV 365
KSDV+SFGIL+MEIV+ GR+P S P+V
Sbjct: 191 IKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 221
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 250
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G+L +L G G K L + + A G+AY+ VH
Sbjct: 251 -EPIYIVGEYMSKGSLLDFLKGETG--KYLRLPQLVDMAAQIASGMAYVER---MNYVHR 304
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAE-ELSGRTSIFNEK 338
+++++NIL+ + K++D GLA+L E++ + E L GR +I K
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 361
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 362 SDVWSFGILLTELTTKGRVP 381
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 133/274 (48%), Gaps = 29/274 (10%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DFIEKVEAIGQVKHKNLVKLFGYC 218
I SG G VY+ ++ AVK+L + + ++ F +V + + +H N++ GY
Sbjct: 32 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+ Q I V ++ + +L LH S E K + I + TA+G+ YLH I+
Sbjct: 90 TKPQLAI-VTQWCEGSSLYHHLHAS--ETK-FEMKKLIDIARQTARGMDYLHAK---SII 142
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--YLAEEL--SGRTSI 334
H ++KS+NI L KI D GLA WS S E + ++A E+ ++
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLAT-EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 335 FNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSR 394
++ +SDVY+FGI++ E+++G+LP YS + D + MV + L P L ++ S
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLP--YS--NINNRDQIIEMVGRGS----LSPDLSKVRSN 253
Query: 395 --KELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
K +KR++ C+ RP +L +E
Sbjct: 254 CPKRMKRLM---AECLKKKRDERPSFPRILAEIE 284
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 31/297 (10%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ P D +Q AKG+ +L
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQ-VAKGMKFLASK- 157
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSI---STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ ++ E+ T +L E L
Sbjct: 158 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL- 214
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 215 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 267
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHN 446
P + + L+C P + RP +++ + E+ + A+Y N
Sbjct: 268 PDPLYE-------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVN 317
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 103/200 (51%), Gaps = 13/200 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ G G V+ R A+K L ++S E F+++ + + +++H+ LV+L+ E
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQLYAVVSE 251
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ +V EY+ G+L +L G +G K L + + A G+AY+ VH
Sbjct: 252 -EPIYIVTEYMSKGSLLDFLKGEMG--KYLRLPQLVDMAAQIASGMAYVER---MNYVHR 305
Query: 281 NMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAEE-LSGRTSIFNEK 338
+++++NIL+ + K++D GL +L E++ + E L GR +I K
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTI---K 362
Query: 339 SDVYSFGILIMEIVS-GRLP 357
SDV+SFGIL+ E+ + GR+P
Sbjct: 363 SDVWSFGILLTELTTKGRVP 382
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 31/297 (10%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ P D +Q AKG+ +L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQ-VAKGMKFLASK- 153
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSI---STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ ++ E+ T +L E L
Sbjct: 154 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL- 210
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 211 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 263
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHN 446
P + + L+C P + RP +++ + E+ + A+Y N
Sbjct: 264 PDPLYE-------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVN 313
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 130/297 (43%), Gaps = 31/297 (10%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ E T + AKG+ +L
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKFLASK- 150
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSI---STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ ++ E+ T +L E L
Sbjct: 151 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL- 207
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 208 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 260
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHN 446
P + + L+C P + RP +++ + E+ + A+Y N
Sbjct: 261 PDPLYE-------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVN 310
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 31/297 (10%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ P D +Q AKG+ +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQ-VAKGMKFLASK- 152
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSI---STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ ++ E+ T +L E L
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL- 209
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 210 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 262
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHN 446
P + + L+C P + RP +++ + E+ + A+Y N
Sbjct: 263 PDPLYE-------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVN 312
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 31/297 (10%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ P D +Q AKG+ +L
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQ-VAKGMKFLASK- 152
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSI---STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ ++ E+ T +L E L
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL- 209
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 210 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 262
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHN 446
P + + L+C P + RP +++ + E+ + A+Y N
Sbjct: 263 PDPLYE-------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVN 312
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 79/274 (28%), Positives = 132/274 (48%), Gaps = 29/274 (10%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DFIEKVEAIGQVKHKNLVKLFGYC 218
I SG G VY+ ++ AVK+L + + ++ F +V + + +H N++ GY
Sbjct: 32 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 89
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
Q I V ++ + +L LH S E K + I + TA+G+ YLH I+
Sbjct: 90 TAPQLAI-VTQWCEGSSLYHHLHAS--ETK-FEMKKLIDIARQTARGMDYLHAK---SII 142
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--YLAEEL--SGRTSI 334
H ++KS+NI L KI D GLA WS S E + ++A E+ ++
Sbjct: 143 HRDLKSNNIFLHEDNTVKIGDFGLAT-EKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNP 201
Query: 335 FNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSR 394
++ +SDVY+FGI++ E+++G+LP YS + D + MV + L P L ++ S
Sbjct: 202 YSFQSDVYAFGIVLYELMTGQLP--YS--NINNRDQIIEMVGRGS----LSPDLSKVRSN 253
Query: 395 --KELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
K +KR++ C+ RP +L +E
Sbjct: 254 CPKRMKRLM---AECLKKKRDERPSFPRILAEIE 284
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 31/273 (11%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ P D +Q AKG+ YL
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQ-VAKGMKYLASK- 150
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPE-WSI--STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ ++ E +S+ T +L E L
Sbjct: 151 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 207
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 208 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 260
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
P + + L+C P + RP +++
Sbjct: 261 PDPLYE-------VMLKCWHPKAEMRPSFSELV 286
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 109/211 (51%), Gaps = 18/211 (8%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ A + + AVK + S+S E F+ + + ++H LVKL V
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA-VVT 253
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAK---GLAYLHEDIEPKI 277
+ ++ E++ G+L +L G +PL K+I +A+ G+A++ +
Sbjct: 254 KEPIYIITEFMAKGSLLDFLKSDEGSKQPLP-----KLIDFSAQIAEGMAFIEQR---NY 305
Query: 278 VHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFN 336
+H +++++NIL+ KI+D GLA+ + E++ + E ++ + F
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGS--FT 363
Query: 337 EKSDVYSFGILIMEIVS-GRLPV-DYSQPQV 365
KSDV+SFGIL+MEIV+ GR+P S P+V
Sbjct: 364 IKSDVWSFGILLMEIVTYGRIPYPGMSNPEV 394
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ E T + AKG+ YL
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK- 149
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPE-WSI--STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ ++ E +S+ T +L E L
Sbjct: 150 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 206
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 207 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 259
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
P + + L+C P + RP +++
Sbjct: 260 PDPLYE-------VMLKCWHPKAEMRPSFSELV 285
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 122/273 (44%), Gaps = 31/273 (11%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ E T + AKG+ YL
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK- 147
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSI---STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ ++ E+ T +L E L
Sbjct: 148 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 204
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 205 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 257
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
P + + L+C P + RP +++
Sbjct: 258 PDPLYE-------VMLKCWHPKAEMRPSFSELV 283
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 131/297 (44%), Gaps = 31/297 (10%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ P D +Q AKG+ +L
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQ-VAKGMKFLASK- 211
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSI---STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ ++ E+ T +L E L
Sbjct: 212 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESL- 268
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 269 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 321
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHN 446
P + + L+C P + RP +++ + E+ + A+Y N
Sbjct: 322 PDPLYE-------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVN 371
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 94 RIEPDIGMPEP----DAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 146
Query: 299 DVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
D GLA + + E ++ C Y+A EL R E DV+S GI++ +++G
Sbjct: 147 DFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 356 LPVD 359
LP D
Sbjct: 205 LPWD 208
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 31/273 (11%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ P D +Q AKG+ YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQ-VAKGMKYLASK- 152
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPE-WSI--STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ ++ E +S+ T +L E L
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 209
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 210 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 262
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
P + + L+C P + RP +++
Sbjct: 263 PDPLYE-------VMLKCWHPKAEMRPSFSELV 288
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ E T + AKG+ YL
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK- 152
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPE-WSI--STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ ++ E +S+ T +L E L
Sbjct: 153 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 209
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 210 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 262
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
P + + L+C P + RP +++
Sbjct: 263 PDPLYE-------VMLKCWHPKAEMRPSFSELV 288
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ E T + AKG+ YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK- 151
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPE-WSI--STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ ++ E +S+ T +L E L
Sbjct: 152 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 208
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 209 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 261
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
P + + L+C P + RP +++
Sbjct: 262 PDPLYE-------VMLKCWHPKAEMRPSFSELV 287
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 125/273 (45%), Gaps = 31/273 (11%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ P D +Q AKG+ YL
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQ-VAKGMKYLASK- 144
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPE-WSI--STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ ++ E +S+ T +L E L
Sbjct: 145 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 201
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 202 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 254
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
P + + L+C P + RP +++
Sbjct: 255 PDPLYE-------VMLKCWHPKAEMRPSFSELV 280
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ E T + AKG+ YL
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK- 171
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPE-WSI--STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ ++ E +S+ T +L E L
Sbjct: 172 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 228
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 229 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 281
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
P + + L+C P + RP +++
Sbjct: 282 PDPLYE-------VMLKCWHPKAEMRPSFSELV 307
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 144/317 (45%), Gaps = 44/317 (13%)
Query: 140 GIRISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLL----DNMRAAVKLLMSNSVSEEE- 194
+R KEID + VI G+ G V L + A+K L + ++
Sbjct: 18 AVREFAKEID--ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRR 75
Query: 195 DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDT 254
DF+ + +GQ H N++ L G + + +++ EY++NG+L +L + G T
Sbjct: 76 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR---FTVIQ 132
Query: 255 RMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSI 312
+ +++G G+ YL + VH ++ + NIL++ + K+SD G++++ PE +
Sbjct: 133 LVGMLRGIGSGMKYLS---DMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY 189
Query: 313 STSCELRNSGYLAEELSGRTSI----FNEKSDVYSFGILIMEIVS-GRLPV-DYSQPQVF 366
+T G + + +I F SDV+S+GI++ E++S G P D S V
Sbjct: 190 TT-----RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV- 243
Query: 367 LIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
+K++ ++ P M L +++ L C + RPK G ++ ML
Sbjct: 244 ----IKAIEEGYRLP-------PPMDCPIALHQLM---LDCWQKERSDRPKFGQIVNML- 288
Query: 427 PRDLLLREEYRIKRAAS 443
D L+R +KR S
Sbjct: 289 --DKLIRNPNSLKRTGS 303
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 72.8 bits (177), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 124/273 (45%), Gaps = 31/273 (11%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ E T + AKG+ YL
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK- 170
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPE-WSI--STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ ++ E +S+ T +L E L
Sbjct: 171 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESL- 227
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 228 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 280
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
P + + L+C P + RP +++
Sbjct: 281 PDPLYE-------VMLKCWHPKAEMRPSFSELV 306
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 72.4 bits (176), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 95 RIEPDIGMPEP----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKIS 147
Query: 299 DVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
D GLA + + E ++ C Y+A EL R E DV+S GI++ +++G
Sbjct: 148 DFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 356 LPVD 359
LP D
Sbjct: 206 LPWD 209
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 80/317 (25%), Positives = 144/317 (45%), Gaps = 44/317 (13%)
Query: 140 GIRISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLL----DNMRAAVKLLMSNSVSEEE- 194
+R KEID + VI G+ G V L + A+K L + ++
Sbjct: 3 AVREFAKEID--ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRR 60
Query: 195 DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDT 254
DF+ + +GQ H N++ L G + + +++ EY++NG+L +L + G T
Sbjct: 61 DFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR---FTVIQ 117
Query: 255 RMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSI 312
+ +++G G+ YL + VH ++ + NIL++ + K+SD G++++ PE +
Sbjct: 118 LVGMLRGIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAY 174
Query: 313 STSCELRNSGYLAEELSGRTSI----FNEKSDVYSFGILIMEIVS-GRLPV-DYSQPQVF 366
+T G + + +I F SDV+S+GI++ E++S G P D S V
Sbjct: 175 TT-----RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV- 228
Query: 367 LIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
+K++ ++ P M L +++ L C + RPK G ++ ML
Sbjct: 229 ----IKAIEEGYRLP-------PPMDCPIALHQLM---LDCWQKERSDRPKFGQIVNML- 273
Query: 427 PRDLLLREEYRIKRAAS 443
D L+R +KR S
Sbjct: 274 --DKLIRNPNSLKRTGS 288
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 94 RIEPDIGMPEP----DAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 146
Query: 299 DVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
D GLA + + E ++ C Y+A EL R E DV+S GI++ +++G
Sbjct: 147 DFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 356 LPVD 359
LP D
Sbjct: 205 LPWD 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 160 VIASGDNGVVYRAV-LLDNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGY 217
+ G G V AV + AVK++ M +V E+ +++ + H+N+VK +G+
Sbjct: 13 TLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 218 CVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKI 277
EG + L EY G L + +G +P + G+ YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGI---GI 125
Query: 278 VHHNMKSSNILLDHHWNPKISDVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSI 334
H ++K N+LLD N KISD GLA + + E ++ C Y+A EL R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREF 183
Query: 335 FNEKSDVYSFGILIMEIVSGRLPVD 359
E DV+S GI++ +++G LP D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 72.0 bits (175), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 33 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 92
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 93 RIEPDIGMPEP----DAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 145
Query: 299 DVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
D GLA + + E ++ C Y+A EL R E DV+S GI++ +++G
Sbjct: 146 DFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 203
Query: 356 LPVD 359
LP D
Sbjct: 204 LPWD 207
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 72.0 bits (175), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 94 RIEPDIGMPEP----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKIS 146
Query: 299 DVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
D GLA + + E ++ C Y+A EL R E DV+S GI++ +++G
Sbjct: 147 DFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 356 LPVD 359
LP D
Sbjct: 205 LPWD 208
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 95 RIEPDIGMPEP----DAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 147
Query: 299 DVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
D GLA + + E ++ C Y+A EL R E DV+S GI++ +++G
Sbjct: 148 DFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 356 LPVD 359
LP D
Sbjct: 206 LPWD 209
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 71.6 bits (174), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 94 RIEPDIGMPEP----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKIS 146
Query: 299 DVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
D GLA + + E ++ C Y+A EL R E DV+S GI++ +++G
Sbjct: 147 DFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 356 LPVD 359
LP D
Sbjct: 205 LPWD 208
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 95 RIEPDIGMPEP----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKIS 147
Query: 299 DVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
D GLA + + E ++ C Y+A EL R E DV+S GI++ +++G
Sbjct: 148 DFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 356 LPVD 359
LP D
Sbjct: 206 LPWD 209
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 94 RIEPDIGMPEP----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKIS 146
Query: 299 DVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
D GLA + + E ++ C Y+A EL R E DV+S GI++ +++G
Sbjct: 147 DFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 356 LPVD 359
LP D
Sbjct: 205 LPWD 208
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 95 RIEPDIGMPEP----DAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 147
Query: 299 DVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
D GLA + + E ++ C Y+A EL R E DV+S GI++ +++G
Sbjct: 148 DFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 356 LPVD 359
LP D
Sbjct: 206 LPWD 209
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 95 RIEPDIGMPEP----DAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 147
Query: 299 DVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
D GLA + + E ++ C Y+A EL R E DV+S GI++ +++G
Sbjct: 148 DFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 356 LPVD 359
LP D
Sbjct: 206 LPWD 209
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 79/311 (25%), Positives = 142/311 (45%), Gaps = 44/311 (14%)
Query: 146 KEIDIVTDGFAEQNVIASGDNGVVYRAVLL----DNMRAAVKLLMSNSVSEEE-DFIEKV 200
KEID + VI G+ G V L + A+K L + ++ DF+ +
Sbjct: 3 KEID--ASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEA 60
Query: 201 EAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQ 260
+GQ H N++ L G + + +++ EY++NG+L +L + G T + +++
Sbjct: 61 SIMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR---FTVIQLVGMLR 117
Query: 261 GTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCEL 318
G G+ YL + VH ++ + NIL++ + K+SD G++++ PE + +T
Sbjct: 118 GIGSGMKYLS---DMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTT---- 170
Query: 319 RNSGYLAEELSGRTSI----FNEKSDVYSFGILIMEIVS-GRLPV-DYSQPQVFLIDWLK 372
G + + +I F SDV+S+GI++ E++S G P D S V +K
Sbjct: 171 -RGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDV-----IK 224
Query: 373 SMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLL 432
++ ++ P M L +++ L C + RPK G ++ ML D L+
Sbjct: 225 AIEEGYRLP-------PPMDCPIALHQLM---LDCWQKERSDRPKFGQIVNML---DKLI 271
Query: 433 REEYRIKRAAS 443
R +KR S
Sbjct: 272 RNPNSLKRTGS 282
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 95 RIEPDIGMPEP----DAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 147
Query: 299 DVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
D GLA + + E ++ C Y+A EL R E DV+S GI++ +++G
Sbjct: 148 DFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 205
Query: 356 LPVD 359
LP D
Sbjct: 206 LPWD 209
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 71.6 bits (174), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 88/184 (47%), Gaps = 13/184 (7%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 94 RIEPDIGMPEP----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKIS 146
Query: 299 DVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
D GLA + + E ++ C Y+A EL R E DV+S GI++ +++G
Sbjct: 147 DFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGE 204
Query: 356 LPVD 359
LP D
Sbjct: 205 LPWD 208
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 120/273 (43%), Gaps = 31/273 (11%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ E T + AKG+ YL
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRN---ETHNPTVKDLIGFGLQVAKGMKYLASK- 151
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSIS----TSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ + S T +L E L
Sbjct: 152 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESL- 208
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 209 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 261
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
P + + L+C P + RP +++
Sbjct: 262 PDPLYE-------VMLKCWHPKAEMRPSFSELV 287
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 160 VIASGDNGVVYRAV-LLDNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGY 217
+ G G V AV + AVK++ M +V E+ +++ + H+N+VK +G+
Sbjct: 14 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 73
Query: 218 CVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKI 277
EG + L EY G L + +G +P + G+ YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGI---GI 126
Query: 278 VHHNMKSSNILLDHHWNPKISDVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSI 334
H ++K N+LLD N KISD GLA + + E ++ C Y+A EL R
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREF 184
Query: 335 FNEKSDVYSFGILIMEIVSGRLPVD 359
E DV+S GI++ +++G LP D
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELPWD 209
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 118/263 (44%), Gaps = 40/263 (15%)
Query: 181 AVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWL 240
+K L+ + F+++V+ + ++H N++K G + + + EYI G L+ +
Sbjct: 39 VMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII 98
Query: 241 HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDV 300
S+ P W R+ + A G+AYLH I+H ++ S N L+ + N ++D
Sbjct: 99 K-SMDSQYP--WSQRVSFAKDIASGMAYLHSM---NIIHRDLNSHNCLVRENKNVVVADF 152
Query: 301 GLAKLH-----GPEWSISTSCELRNSGYLA---------EELSGRTSIFNEKSDVYSFGI 346
GLA+L PE S R Y E ++GR+ ++EK DV+SFGI
Sbjct: 153 GLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAPEMINGRS--YDEKVDVFSFGI 210
Query: 347 LIMEIVSGRLPVDYSQPQVFLIDWL-KSMVAQQKIAYVLDPKLPE--MPSRKELKRIILI 403
++ EI+ GR+ D D+L ++M + LD P PS I
Sbjct: 211 VLCEII-GRVNAD--------PDYLPRTMDFGLNVRGFLDRYCPPNCPPS------FFPI 255
Query: 404 ALRCVDPDIKHRPKMGDVLRMLE 426
+RC D D + RP + LE
Sbjct: 256 TVRCCDLDPEKRPSFVKLEHWLE 278
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 95/205 (46%), Gaps = 14/205 (6%)
Query: 160 VIASGDNGVVYRAV-LLDNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGY 217
+ G G V AV + AVK++ M +V E+ +++ + H+N+VK +G+
Sbjct: 13 TLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGH 72
Query: 218 CVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKI 277
EG + L EY G L + +G +P + G+ YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPDIGMPEP----DAQRFFHQLMAGVVYLHGI---GI 125
Query: 278 VHHNMKSSNILLDHHWNPKISDVGLA---KLHGPEWSISTSCELRNSGYLAEELSGRTSI 334
H ++K N+LLD N KISD GLA + + E ++ C Y+A EL R
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMC--GTLPYVAPELLKRREF 183
Query: 335 FNEKSDVYSFGILIMEIVSGRLPVD 359
E DV+S GI++ +++G LP D
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELPWD 208
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 130/297 (43%), Gaps = 31/297 (10%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G G VY LLDN + AVK L + E F+ + + H N++ L
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 215 FGYCVEGQNR-ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
G C+ + ++V Y+ +G+L+ ++ P D +Q AKG+ +L
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNE--THNPTVKDLIGFGLQ-VAKGMKFLASK- 153
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSI---STSCELRNSGYLAEELS 329
K VH ++ + N +LD + K++D GLA+ + E+ T +L E L
Sbjct: 154 --KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESL- 210
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLP 389
+T F KSDV+SFG+L+ E+++ P P V D ++ +++ L P+
Sbjct: 211 -QTQKFTTKSDVWSFGVLLWELMTRGAP---PYPDVNTFDITVYLLQGRRL---LQPEYC 263
Query: 390 EMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHN 446
P + + L+C P + RP +++ + E+ + A+Y N
Sbjct: 264 PDPLYE-------VMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVHVNATYVN 313
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 102/212 (48%), Gaps = 14/212 (6%)
Query: 153 DGFAEQNVIASGDNGVVYRA-VLLDNMRAAVKLLMSNSVSEE---EDFIEKVEAIGQVKH 208
+ F N++ G VYRA + + A+K++ ++ + + +V+ Q+KH
Sbjct: 11 EDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKH 70
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAY 268
++++L+ Y + LV E NG + ++L KP + + + G+ Y
Sbjct: 71 PSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKN---RVKPFSENEARHFMHQIITGMLY 127
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA-KLHGPEWSISTSCELRNSGYLAEE 327
LH I+H ++ SN+LL + N KI+D GLA +L P T C N Y++ E
Sbjct: 128 LHSH---GILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPN--YISPE 182
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
++ R S +SDV+S G + ++ GR P D
Sbjct: 183 IATR-SAHGLESDVWSLGCMFYTLLIGRPPFD 213
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 94 RIEPDIGMPEP----DAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 146
Query: 299 DVGLAKLHGPEWSISTSCELRNS-----GYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
D GLA + + + L N Y+A EL R E DV+S GI++ +++
Sbjct: 147 DFGLATV----FRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GRLPVD 359
G LP D
Sbjct: 203 GELPWD 208
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/289 (28%), Positives = 138/289 (47%), Gaps = 32/289 (11%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DFIEKVEAIGQVKHKNLVKLFGYC 218
I SG G VY+ ++ AVK+L + + ++ F +V + + +H N++ GY
Sbjct: 18 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 75
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+ Q I V ++ + +L LH + E K + I + TA+G+ YLH I+
Sbjct: 76 TKPQLAI-VTQWCEGSSLYHHLH--IIETK-FEMIKLIDIARQTAQGMDYLHAK---SII 128
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--YLAEEL--SGRTSI 334
H ++KS+NI L KI D GLA + WS S E + ++A E+ +
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKS-RWSGSHQFEQLSGSILWMAPEVIRMQDKNP 187
Query: 335 FNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSR 394
++ +SDVY+FGI++ E+++G+LP + D + MV + L P L ++ S
Sbjct: 188 YSFQSDVYAFGIVLYELMTGQLPYSNINNR----DQIIFMVGRG----YLSPDLSKVRSN 239
Query: 395 --KELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRA 441
K +KR++ C+ RP +L +E LL R +I R+
Sbjct: 240 CPKAMKRLM---AECLKKKRDERPLFPQILASIE---LLARSLPKIHRS 282
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 35 VAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 94
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 95 RIEPDIGMPEP----DAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 147
Query: 299 DVGLAKLHGPEWSISTSCELRNS-----GYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
D GLA + + + L N Y+A EL R E DV+S GI++ +++
Sbjct: 148 DFGLATV----FRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 203
Query: 354 GRLPVD 359
G LP D
Sbjct: 204 GELPWD 209
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 32/310 (10%)
Query: 139 LGIRISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DF 196
LG R S + +I I SG G VY+ ++ AVK+L + + ++ F
Sbjct: 21 LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAF 78
Query: 197 IEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRM 256
+V + + +H N++ GY + Q I V ++ + +L LH + E K +
Sbjct: 79 KNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH--IIETK-FEMIKLI 134
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSC 316
I + TA+G+ YLH I+H ++KS+NI L KI D GLA + WS S
Sbjct: 135 DIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS-RWSGSHQF 190
Query: 317 ELRNSG--YLAEEL--SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLK 372
E + ++A E+ + ++ +SDVY+FGI++ E+++G+LP YS + D +
Sbjct: 191 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YS--NINNRDQII 246
Query: 373 SMVAQQKIAYVLDPKLPEMPSR--KELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDL 430
MV + L P L ++ S K +KR++ C+ RP +L +E L
Sbjct: 247 FMVGRG----YLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIE---L 296
Query: 431 LLREEYRIKR 440
L R +I R
Sbjct: 297 LARSLPKIHR 306
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 137/288 (47%), Gaps = 32/288 (11%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DFIEKVEAIGQVKHKNLVKLFGYC 218
I SG G VY+ ++ AVK+L + + ++ F +V + + +H N++ GY
Sbjct: 21 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+ Q I V ++ + +L LH + E K + I + TA+G+ YLH I+
Sbjct: 79 TKPQLAI-VTQWCEGSSLYHHLH--IIETK-FEMIKLIDIARQTAQGMDYLHAK---SII 131
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--YLAEEL--SGRTSI 334
H ++KS+NI L KI D GLA + WS S E + ++A E+ +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKS-RWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 335 FNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSR 394
++ +SDVY+FGI++ E+++G+LP + D + MV + L P L ++ S
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLPYSNINNR----DQIIFMVGRG----YLSPDLSKVRSN 242
Query: 395 --KELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKR 440
K +KR++ C+ RP +L +E LL R +I R
Sbjct: 243 CPKAMKRLM---AECLKKKRDERPLFPQILASIE---LLARSLPKIHR 284
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/311 (28%), Positives = 146/311 (46%), Gaps = 32/311 (10%)
Query: 139 LGIRISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DF 196
LG R S + +I I SG G VY+ ++ AVK+L + + ++ F
Sbjct: 14 LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAF 71
Query: 197 IEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRM 256
+V + + +H N++ GY + Q I V ++ + +L LH + E K +
Sbjct: 72 KNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH--IIETK-FEMIKLI 127
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSC 316
I + TA+G+ YLH I+H ++KS+NI L KI D GLA WS S
Sbjct: 128 DIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLAT-EKSRWSGSHQF 183
Query: 317 ELRNSG--YLAEEL--SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLK 372
E + ++A E+ + ++ +SDVY+FGI++ E+++G+LP YS + D +
Sbjct: 184 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YS--NINNRDQII 239
Query: 373 SMVAQQKIAYVLDPKLPEMPSR--KELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDL 430
MV + L P L ++ S K +KR++ C+ RP +L +E L
Sbjct: 240 FMVGRG----YLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIE---L 289
Query: 431 LLREEYRIKRA 441
L R +I R+
Sbjct: 290 LARSLPKIHRS 300
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 146/310 (47%), Gaps = 32/310 (10%)
Query: 139 LGIRISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DF 196
LG R S + +I I SG G VY+ ++ AVK+L + + ++ F
Sbjct: 22 LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAF 79
Query: 197 IEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRM 256
+V + + +H N++ GY + Q I V ++ + +L LH + E K +
Sbjct: 80 KNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH--IIETK-FEMIKLI 135
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSC 316
I + TA+G+ YLH I+H ++KS+NI L KI D GLA + WS S
Sbjct: 136 DIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLATVKS-RWSGSHQF 191
Query: 317 ELRNSG--YLAEEL--SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLK 372
E + ++A E+ + ++ +SDVY+FGI++ E+++G+LP YS + D +
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YS--NINNRDQII 247
Query: 373 SMVAQQKIAYVLDPKLPEMPSR--KELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDL 430
MV + L P L ++ S K +KR++ C+ RP +L +E L
Sbjct: 248 FMVGRG----YLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIE---L 297
Query: 431 LLREEYRIKR 440
L R +I R
Sbjct: 298 LARSLPKIHR 307
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 127/286 (44%), Gaps = 43/286 (15%)
Query: 161 IASGDNGVVYRAVLLD------NMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY D R AVK + S S+ E +F+ + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ ++V E + +G+L+ +L EA+ P T +++ A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG----- 322
YL+ K VH ++ + N ++ H + KI D G+ + I + R G
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR------DIYETAYYRKGGKGLLP 195
Query: 323 --YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKI 380
++A E S + +F SD++SFG+++ EI S QP + + +Q +
Sbjct: 196 VRWMAPE-SLKDGVFTTSSDMWSFGVVLWEITSLA-----EQP-------YQGLSNEQVL 242
Query: 381 AYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
+V+D + P +R+ + C + K RP +++ +L+
Sbjct: 243 KFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 118/248 (47%), Gaps = 36/248 (14%)
Query: 121 CTR----AQANGNIRRSVSGMRLGIRISLKEIDIV-TDGFAEQNVIASGDNGVVYRAVLL 175
CTR G + R G +++KE+ ++ T G E + GD YR
Sbjct: 164 CTRLIKPKVMEGTVAAQDEFYRSGWALNMKELKLLQTIGKGEFGDVMLGD----YRG--- 216
Query: 176 DNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRI-LVYEYIDNG 234
+ AVK + +++ ++ F+ + + Q++H NLV+L G VE + + +V EY+ G
Sbjct: 217 --NKVAVKCIKNDATAQA--FLAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKG 272
Query: 235 NLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
+L +L S G + L D +K + + YL + VH ++ + N+L+
Sbjct: 273 SLVDYLR-SRGRS-VLGGDCLLKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNV 327
Query: 295 PKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSG----RTSIFNEKSDVYSFGILIME 350
K+SD GL K + +++G L + + R F+ KSDV+SFGIL+ E
Sbjct: 328 AKVSDFGLTK---------EASSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWE 378
Query: 351 IVS-GRLP 357
I S GR+P
Sbjct: 379 IYSFGRVP 386
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 32/203 (15%)
Query: 176 DNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
D M AVK L +++ +DF + E + ++H+++VK +G C +G I+V+EY+ +G+
Sbjct: 44 DKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGD 103
Query: 236 LQQWL--HGS----LGEAKP------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMK 283
L ++L HG L + +P L + I A G+ YL VH ++
Sbjct: 104 LNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQ---HFVHRDLA 160
Query: 284 SSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA--------EELSGRTSIF 335
+ N L+ + KI D G+++ + ++ R G+ E + R F
Sbjct: 161 TRNCLVGANLLVKIGDFGMSR------DVYSTDYYRVGGHTMLPIRWMPPESIMYRK--F 212
Query: 336 NEKSDVYSFGILIMEIVS-GRLP 357
+SDV+SFG+++ EI + G+ P
Sbjct: 213 TTESDVWSFGVILWEIFTYGKQP 235
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 113/225 (50%), Gaps = 32/225 (14%)
Query: 140 GIRISLKEIDIV-TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIE 198
G +++KE+ ++ T G E + GD YR + AVK + +++ ++ F+
Sbjct: 6 GWALNMKELKLLQTIGKGEFGDVMLGD----YRG-----NKVAVKCIKNDATAQA--FLA 54
Query: 199 KVEAIGQVKHKNLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK 257
+ + Q++H NLV+L G VE + + +V EY+ G+L +L S G + L D +K
Sbjct: 55 EASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-SRGRS-VLGGDCLLK 112
Query: 258 IIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCE 317
+ + YL + VH ++ + N+L+ K+SD GL K +
Sbjct: 113 FSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK---------EASS 160
Query: 318 LRNSGYLAEELSG----RTSIFNEKSDVYSFGILIMEIVS-GRLP 357
+++G L + + R + F+ KSDV+SFGIL+ EI S GR+P
Sbjct: 161 TQDTGKLPVKWTAPEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G GVV A+K++ S+SE+E FIE+ + + + H+ LV+L+G C +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCTK 70
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ ++ EY+ NG L +L + +++ + + + YL + +H
Sbjct: 71 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHR 124
Query: 281 NMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++ + N L++ K+SD GL++ + E++ S + E L S F+ KS
Sbjct: 125 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL--MYSKFSSKS 182
Query: 340 DVYSFGILIMEIVS-GRLPVD 359
D+++FG+L+ EI S G++P +
Sbjct: 183 DIWAFGVLMWEIYSLGKMPYE 203
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DFIEKVEAIGQVKHKNLVKLFGYC 218
I SG G VY+ ++ AVK+L + + ++ F +V + + +H N++ GY
Sbjct: 21 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 78
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+ Q I V ++ + +L LH + E K + I + TA+G+ YLH I+
Sbjct: 79 TKPQLAI-VTQWCEGSSLYHHLH--IIETK-FEMIKLIDIARQTAQGMDYLHAK---SII 131
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--YLAEEL--SGRTSI 334
H ++KS+NI L KI D GLA + WS S E + ++A E+ +
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKS-RWSGSHQFEQLSGSILWMAPEVIRMQDKNP 190
Query: 335 FNEKSDVYSFGILIMEIVSGRLP 357
++ +SDVY+FGI++ E+++G+LP
Sbjct: 191 YSFQSDVYAFGIVLYELMTGQLP 213
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 161 IASGDNGVVYRAVLLD------NMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY D R AVK + S S+ E +F+ + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ ++V E + +G+L+ +L EA+ P T +++ A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAE 326
YL+ K VH ++ + N ++ H + KI D G+ + ++ ++ L ++A
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDP 386
E S + +F SD++SFG+++ EI S QP + + +Q + +V+D
Sbjct: 202 E-SLKDGVFTTSSDMWSFGVVLWEITSLA-----EQP-------YQGLSNEQVLKFVMDG 248
Query: 387 KLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
+ P +R+ + C + K RP +++ +L+
Sbjct: 249 GYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DFIEKVEAIGQVKHKNLVKLFGYC 218
I SG G VY+ ++ AVK+L + + ++ F +V + + +H N++ GY
Sbjct: 16 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+ Q I V ++ + +L LH + E K + I + TA+G+ YLH I+
Sbjct: 74 TKPQLAI-VTQWCEGSSLYHHLH--IIETK-FEMIKLIDIARQTAQGMDYLHAK---SII 126
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--YLAEEL--SGRTSI 334
H ++KS+NI L KI D GLA + WS S E + ++A E+ +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKS-RWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 335 FNEKSDVYSFGILIMEIVSGRLP 357
++ +SDVY+FGI++ E+++G+LP
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G GVV A+K++ S+SE+E FIE+ + + + H+ LV+L+G C +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCTK 74
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ ++ EY+ NG L +L + +++ + + + YL + +H
Sbjct: 75 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHR 128
Query: 281 NMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++ + N L++ K+SD GL++ + E++ S + E L S F+ KS
Sbjct: 129 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL--MYSKFSSKS 186
Query: 340 DVYSFGILIMEIVS-GRLPVD 359
D+++FG+L+ EI S G++P +
Sbjct: 187 DIWAFGVLMWEIYSLGKMPYE 207
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 161 IASGDNGVVYRAVLLD------NMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY D R AVK + S S+ E +F+ + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ ++V E + +G+L+ +L EA+ P T +++ A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAE 326
YL+ K VH N+ + N ++ H + KI D G+ + ++ ++ L ++A
Sbjct: 145 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 201
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVS 353
E S + +F SD++SFG+++ EI S
Sbjct: 202 E-SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 88/310 (28%), Positives = 145/310 (46%), Gaps = 32/310 (10%)
Query: 139 LGIRISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DF 196
LG R S + +I I SG G VY+ ++ AVK+L + + ++ F
Sbjct: 22 LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAF 79
Query: 197 IEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRM 256
+V + + +H N++ GY + Q I V ++ + +L LH + E K +
Sbjct: 80 KNEVGVLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLH--IIETK-FEMIKLI 135
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSC 316
I + TA+G+ YLH I+H ++KS+NI L KI D GLA WS S
Sbjct: 136 DIARQTAQGMDYLHAK---SIIHRDLKSNNIFLHEDLTVKIGDFGLAT-EKSRWSGSHQF 191
Query: 317 ELRNSG--YLAEEL--SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLK 372
E + ++A E+ + ++ +SDVY+FGI++ E+++G+LP YS + D +
Sbjct: 192 EQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP--YS--NINNRDQII 247
Query: 373 SMVAQQKIAYVLDPKLPEMPSR--KELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDL 430
MV + L P L ++ S K +KR++ C+ RP +L +E L
Sbjct: 248 FMVGRG----YLSPDLSKVRSNCPKAMKRLM---AECLKKKRDERPLFPQILASIE---L 297
Query: 431 LLREEYRIKR 440
L R +I R
Sbjct: 298 LARSLPKIHR 307
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 127/286 (44%), Gaps = 43/286 (15%)
Query: 161 IASGDNGVVYRAVLLD------NMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY D R AVK + S S+ E +F+ + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ ++V E + +G+L+ +L EA+ P T +++ A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG----- 322
YL+ K VH ++ + N ++ H + KI D G+ + I + R G
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR------DIXETDXXRKGGKGLLP 195
Query: 323 --YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKI 380
++A E S + +F SD++SFG+++ EI S QP + + +Q +
Sbjct: 196 VRWMAPE-SLKDGVFTTSSDMWSFGVVLWEITS-----LAEQP-------YQGLSNEQVL 242
Query: 381 AYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
+V+D + P +R+ + C + K RP +++ +L+
Sbjct: 243 KFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLK 287
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 94 RIEPDIGMPEP----DAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 146
Query: 299 DVGLAKLHGPEWSISTSCELRNS-----GYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
D GLA + + + L N Y+A EL R E DV+S GI++ +++
Sbjct: 147 DFGLATV----FRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GRLPVD 359
G LP D
Sbjct: 203 GELPWD 208
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 106/207 (51%), Gaps = 22/207 (10%)
Query: 158 QNVIASGDNGVVYRAVL-LDNMR---AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ VI +G+ G V L L R A+K L + + + DF+ + +GQ H N++
Sbjct: 27 ERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNII 86
Query: 213 KLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
L G + + ++V EY++NG+L +L + G+ T + +++G + G+ YL
Sbjct: 87 HLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ---FTVIQLVGMLRGISAGMKYLS-- 141
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEELSG 330
+ VH ++ + NIL++ + K+SD GL+++ PE + +T G + +
Sbjct: 142 -DMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTA 195
Query: 331 RTSI----FNEKSDVYSFGILIMEIVS 353
+I F SDV+S+GI++ E+VS
Sbjct: 196 PEAIAFRKFTSASDVWSYGIVMWEVVS 222
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/286 (23%), Positives = 127/286 (44%), Gaps = 43/286 (15%)
Query: 161 IASGDNGVVYRAVLLD------NMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY D R AVK + S S+ E +F+ + + ++V+
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ ++V E + +G+L+ +L EA+ P T +++ A G+A
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG----- 322
YL+ K VH ++ + N ++ H + KI D G+ + I + R G
Sbjct: 142 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR------DIXETDXXRKGGKGLLP 192
Query: 323 --YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKI 380
++A E S + +F SD++SFG+++ EI S QP + + +Q +
Sbjct: 193 VRWMAPE-SLKDGVFTTSSDMWSFGVVLWEITS-----LAEQP-------YQGLSNEQVL 239
Query: 381 AYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
+V+D + P +R+ + C + K RP +++ +L+
Sbjct: 240 KFVMDGGYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLK 284
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 18/207 (8%)
Query: 161 IASGDNGVVYRAVLLD------NMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY D R AVK + S S+ E +F+ + + ++V+
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ ++V E + +G+L+ +L EA+ P T +++ A G+A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAE 326
YL+ K VH N+ + N ++ H + KI D G+ + ++ ++ L ++A
Sbjct: 146 YLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 202
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVS 353
E S + +F SD++SFG+++ EI S
Sbjct: 203 E-SLKDGVFTTSSDMWSFGVVLWEITS 228
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G GVV A+K++ S+SE+E FIE+ + + + H+ LV+L+G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ ++ EY+ NG L +L + +++ + + + YL + +H
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 281 NMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++ + N L++ K+SD GL++ + E++ S + E L S F+ KS
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL--MYSKFSSKS 202
Query: 340 DVYSFGILIMEIVS-GRLPVD 359
D+++FG+L+ EI S G++P +
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE 223
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/227 (29%), Positives = 113/227 (49%), Gaps = 32/227 (14%)
Query: 138 RLGIRISLKEIDIV-TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDF 196
R G +++KE+ ++ T G E + GD YR + AVK + +++ ++ F
Sbjct: 13 RSGWALNMKELKLLQTIGKGEFGDVMLGD----YRG-----NKVAVKCIKNDATAQA--F 61
Query: 197 IEKVEAIGQVKHKNLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTR 255
+ + + Q++H NLV+L G VE + + +V EY+ G+L +L S G + L D
Sbjct: 62 LAEASVMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-SRGRS-VLGGDCL 119
Query: 256 MKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTS 315
+K + + YL + VH ++ + N+L+ K+SD GL K +
Sbjct: 120 LKFSLDVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK---------EA 167
Query: 316 CELRNSGYLAEELSG----RTSIFNEKSDVYSFGILIMEIVS-GRLP 357
+++G L + + R F+ KSDV+SFGIL+ EI S GR+P
Sbjct: 168 SSTQDTGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/280 (23%), Positives = 128/280 (45%), Gaps = 31/280 (11%)
Query: 161 IASGDNGVVYRAVLLD------NMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY D R AVK + S S+ E +F+ + + ++V+
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ ++V E + +G+L+ +L EA+ P T +++ A G+A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAE 326
YL+ K VH ++ + N ++ H + KI D G+ + ++ ++ L ++A
Sbjct: 144 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAP 200
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDP 386
E S + +F SD++SFG+++ EI S QP + + +Q + +V+D
Sbjct: 201 E-SLKDGVFTTSSDMWSFGVVLWEITS-----LAEQP-------YQGLSNEQVLKFVMDG 247
Query: 387 KLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
+ P +R+ + C + K RP +++ +L+
Sbjct: 248 GYLDQPDNCP-ERVTDLMRMCWQFNPKMRPTFLEIVNLLK 286
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 94 RIEPDIGMPEP----DAQRFFHQLMAGVVYLHGI---GITHRDIKPENLLLDERDNLKIS 146
Query: 299 DVGLAKLHGPEWSISTSCELRNS-----GYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
D GLA + + + L N Y+A EL R E DV+S GI++ +++
Sbjct: 147 DFGLATV----FRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GRLPVD 359
G LP D
Sbjct: 203 GELPWD 208
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G GVV A+K++ S+SE+E FIE+ + + + H+ LV+L+G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ ++ EY+ NG L +L + +++ + + + YL + +H
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 281 NMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++ + N L++ K+SD GL++ + E++ S + E L S F+ KS
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL--MYSKFSSKS 187
Query: 340 DVYSFGILIMEIVS-GRLPVD 359
D+++FG+L+ EI S G++P +
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE 208
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 87/186 (46%), Gaps = 17/186 (9%)
Query: 180 AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ M +V E+ +++ + H+N+VK +G+ EG + L EY G L
Sbjct: 34 VAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFD 93
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKIS 298
+ +G +P + G+ YLH I H ++K N+LLD N KIS
Sbjct: 94 RIEPDIGMPEP----DAQRFFHQLMAGVVYLH---GIGITHRDIKPENLLLDERDNLKIS 146
Query: 299 DVGLAKLHGPEWSISTSCELRNS-----GYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
D GLA + + + L N Y+A EL R E DV+S GI++ +++
Sbjct: 147 DFGLATV----FRYNNRERLLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLA 202
Query: 354 GRLPVD 359
G LP D
Sbjct: 203 GELPWD 208
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 160 VIASGDNGVVYRAVLL----DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
V+ +G+ G V L + A+K L + + + DF+ + +GQ H N+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
G + + ++V EY++NG+L +L + T + +++G A G+ YL +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLS---D 165
Query: 275 PKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEELSGRT 332
VH ++ + NIL++ + K+SD GLA++ PE + +T G + +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTT-----RGGKIPIRWTSPE 220
Query: 333 SI----FNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPK 387
+I F SDV+S+GI++ E++S G P W ++ Q + +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-----------W---EMSNQDVIKAVDEG 266
Query: 388 LPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHNY 447
P + + L C D +RPK ++ +L D L+R +K S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL---DKLIRNPGSLKIITSAAAR 323
Query: 448 P 448
P
Sbjct: 324 P 324
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DFIEKVEAIGQVKHKNLVKLFGYC 218
I SG G VY+ ++ AVK+L + + ++ F +V + + +H N++ GY
Sbjct: 16 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
Q I V ++ + +L LH + E K + I + TA+G+ YLH I+
Sbjct: 74 TAPQLAI-VTQWCEGSSLYHHLH--IIETK-FEMIKLIDIARQTAQGMDYLHAK---SII 126
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--YLAEEL--SGRTSI 334
H ++KS+NI L KI D GLA + WS S E + ++A E+ +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKS-RWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 335 FNEKSDVYSFGILIMEIVSGRLP 357
++ +SDVY+FGI++ E+++G+LP
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 106/218 (48%), Gaps = 20/218 (9%)
Query: 146 KEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMR----AAVKLLMSNSVSEEE-DFIEKV 200
KEID+ E VI +G+ G V R L + A+K L + +F+ +
Sbjct: 9 KEIDVSYVKIEE--VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEA 66
Query: 201 EAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQ 260
+GQ +H N+++L G +++ E+++NG L +L + G+ T + +++
Sbjct: 67 SIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ---FTVIQLVGMLR 123
Query: 261 GTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL-----HGPEWSISTS 315
G A G+ YL E VH ++ + NIL++ + K+SD GL++ P ++ S
Sbjct: 124 GIASGMRYLAEM---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLG 180
Query: 316 CELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
++ E ++ R F SD +S+GI++ E++S
Sbjct: 181 GKIPIRWTAPEAIAFRK--FTSASDAWSYGIVMWEVMS 216
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G GVV A+K++ S+SE+E FIE+ + + + H+ LV+L+G C +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCTK 75
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ ++ EY+ NG L +L + +++ + + + YL + +H
Sbjct: 76 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHR 129
Query: 281 NMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++ + N L++ K+SD GL++ + E++ S + E L S F+ KS
Sbjct: 130 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVL--MYSKFSSKS 187
Query: 340 DVYSFGILIMEIVS-GRLPVD 359
D+++FG+L+ EI S G++P +
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYE 208
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 129/289 (44%), Gaps = 36/289 (12%)
Query: 145 LKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDN-MRAAVKLLMSNSVSEEEDFIEKVEAI 203
L E D D ++ V+ G G+VY L N +R A+K + + E++
Sbjct: 14 LLEYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALH 73
Query: 204 GQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKI---IQ 260
+KHKN+V+ G E + E + G+L L G K D I +
Sbjct: 74 KHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLK----DNEQTIGFYTK 129
Query: 261 GTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAKLHGPEWSISTSCELR 319
+GL YLH++ +IVH ++K N+L++ + KISD G +K + C
Sbjct: 130 QILEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK----RLAGINPCTET 182
Query: 320 NSG---YLAEELSGRTS-IFNEKSDVYSFGILIMEIVSGRLPV-DYSQPQVFLIDWLKSM 374
+G Y+A E+ + + + +D++S G I+E+ +G+ P + +PQ
Sbjct: 183 FTGTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ---------- 232
Query: 375 VAQQKIA-YVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
A K+ + + P++PE S E K I L+C +PD R D+L
Sbjct: 233 AAMFKVGMFKVHPEIPESMS-AEAKAFI---LKCFEPDPDKRACANDLL 277
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 102/201 (50%), Gaps = 11/201 (5%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G GVV A+K++ S+SE+E FIE+ + + + H+ LV+L+G C +
Sbjct: 23 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCTK 81
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ ++ EY+ NG L +L + +++ + + + YL + +H
Sbjct: 82 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLE---SKQFLHR 135
Query: 281 NMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++ + N L++ K+SD GL++ + E++ S + E L S F+ KS
Sbjct: 136 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVL--MYSKFSSKS 193
Query: 340 DVYSFGILIMEIVS-GRLPVD 359
D+++FG+L+ EI S G++P +
Sbjct: 194 DIWAFGVLMWEIYSLGKMPYE 214
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 104/203 (51%), Gaps = 16/203 (7%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DFIEKVEAIGQVKHKNLVKLFGYC 218
I SG G VY+ ++ AVK+L + + ++ F +V + + +H N++ GY
Sbjct: 16 IGSGSFGTVYKGKWHGDV--AVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+ Q I V ++ + +L LH + E K + I + TA+G+ YLH I+
Sbjct: 74 TKPQLAI-VTQWCEGSSLYHHLH--IIETK-FEMIKLIDIARQTAQGMDYLHAK---SII 126
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--YLAEEL--SGRTSI 334
H ++KS+NI L KI D GLA WS S E + ++A E+ +
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLAT-EKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNP 185
Query: 335 FNEKSDVYSFGILIMEIVSGRLP 357
++ +SDVY+FGI++ E+++G+LP
Sbjct: 186 YSFQSDVYAFGIVLYELMTGQLP 208
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 23/213 (10%)
Query: 158 QNVIASGDNGVVYRAVLLDN---MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHK-NLV 212
Q+VI G+ G V +A + + M AA+K + S + DF ++E + ++ H N++
Sbjct: 27 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 86
Query: 213 KLFGYCVEGQNRILVYEYIDNGNLQQWLHGSL------------GEAKPLTWDTRMKIIQ 260
L G C L EY +GNL +L S A L+ +
Sbjct: 87 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 146
Query: 261 GTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRN 320
A+G+ YL + + +H N+ + NIL+ ++ KI+D GL++ G E + +
Sbjct: 147 DVARGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLP 201
Query: 321 SGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
++A E S S++ SDV+S+G+L+ EIVS
Sbjct: 202 VRWMAIE-SLNYSVYTTNSDVWSYGVLLWEIVS 233
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 160 VIASGDNGVVYRAVLL----DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
V+ +G+ G V L + A+K L + + + DF+ + +GQ H N+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
G + + ++V EY++NG+L +L + T + +++G A G+ YL +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLS---D 165
Query: 275 PKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEELSGRT 332
VH ++ + NIL++ + K+SD GL+++ PE + +T G + +
Sbjct: 166 MGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPE 220
Query: 333 SI----FNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPK 387
+I F SDV+S+GI++ E++S G P W ++ Q + +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-----------W---EMSNQDVIKAVDEG 266
Query: 388 LPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHNY 447
P + + L C D +RPK ++ +L D L+R +K S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL---DKLIRNPGSLKIITSAAAR 323
Query: 448 P 448
P
Sbjct: 324 P 324
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 105/210 (50%), Gaps = 23/210 (10%)
Query: 160 VIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
V A G G V++A LL+ A + + S + ++ +V ++ +KH+N+++ G
Sbjct: 31 VKARGRFGCVWKAQLLNEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGAEK 88
Query: 220 EGQ----NRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI-- 273
G + L+ + + G+L +L +A ++W+ I + A+GLAYLHEDI
Sbjct: 89 RGTSVDVDLWLITAFHEKGSLSDFL-----KANVVSWNELCHIAETMARGLAYLHEDIPG 143
Query: 274 -----EPKIVHHNMKSSNILLDHHWNPKISDVGLA-KLHGPEWSISTSCELRNSGYLAEE 327
+P I H ++KS N+LL ++ I+D GLA K + + T ++ Y+A E
Sbjct: 144 LKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE 203
Query: 328 LSGRTSIFNEKS----DVYSFGILIMEIVS 353
+ F + D+Y+ G+++ E+ S
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 15/186 (8%)
Query: 177 NMRAAVKLLMSNSVSEEED---FIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDN 233
N++ A+K + +EE F +V Q+ H+N+V + E LV EYI+
Sbjct: 36 NIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVDEEDDCYYLVMEYIEG 95
Query: 234 GNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDH 291
L +++ HG PL+ DT + G+ + H+ +IVH ++K NIL+D
Sbjct: 96 PTLSEYIESHG------PLSVDTAINFTNQILDGIKHAHD---MRIVHRDIKPQNILIDS 146
Query: 292 HWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEI 351
+ KI D G+AK T+ L Y + E + +E +D+YS GI++ E+
Sbjct: 147 NKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPE-QAKGEATDECTDIYSIGIVLYEM 205
Query: 352 VSGRLP 357
+ G P
Sbjct: 206 LVGEPP 211
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 104/203 (51%), Gaps = 14/203 (6%)
Query: 158 QNVIASGDNGVVYRAVLL----DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ VI +G+ G V L ++ A+K L + + + DF+ + +GQ H N+V
Sbjct: 48 ERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQFDHPNVV 107
Query: 213 KLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
L G G+ ++V E+++NG L +L G+ T + +++G A G+ YL
Sbjct: 108 HLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ---FTVIQLVGMLRGIAAGMRYL--- 161
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEELSG 330
+ VH ++ + NIL++ + K+SD GL+++ PE +T+ + A E +
Sbjct: 162 ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPE-AI 220
Query: 331 RTSIFNEKSDVYSFGILIMEIVS 353
+ F SDV+S+GI++ E++S
Sbjct: 221 QYRKFTSASDVWSYGIVMWEVMS 243
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 121/266 (45%), Gaps = 20/266 (7%)
Query: 155 FAEQNVIASGDNGVVYRA-VLLDNMRAAVKLLMSNSVSEEE---DFIEKVEAIGQVKHKN 210
F + I G VYRA LLD + A+K + + + + D I++++ + Q+ H N
Sbjct: 34 FRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPN 93
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
++K + +E +V E D G+L + + + + + T K L ++H
Sbjct: 94 VIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSALEHMH 153
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSG 330
+++H ++K +N+ + K+ D+GL + + + + S L + Y
Sbjct: 154 SR---RVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS--LVGTPYYMSPERI 208
Query: 331 RTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE 390
+ +N KSD++S G L+ E+ + + P F D + +KI P LP
Sbjct: 209 HENGYNFKSDIWSLGCLLYEMAALQSP--------FYGDKMNLYSLCKKIEQCDYPPLPS 260
Query: 391 MPSRKELKRIILIALRCVDPDIKHRP 416
+EL++++ + C++PD + RP
Sbjct: 261 DHYSEELRQLVNM---CINPDPEKRP 283
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 68.9 bits (167), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 128/287 (44%), Gaps = 36/287 (12%)
Query: 147 EIDIVTDGFAEQNVIASGDNGVVYRAVLLDN-MRAAVKLLMSNSVSEEEDFIEKVEAIGQ 205
E D D ++ V+ G G+VY L N +R A+K + + E++
Sbjct: 2 EYDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKH 61
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKI---IQGT 262
+KHKN+V+ G E + E + G+L L G K D I +
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLK----DNEQTIGFYTKQI 117
Query: 263 AKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAKLHGPEWSISTSCELRNS 321
+GL YLH++ +IVH ++K N+L++ + KISD G +K + C +
Sbjct: 118 LEGLKYLHDN---QIVHRDIKGDNVLINTYSGVLKISDFGTSK----RLAGINPCTETFT 170
Query: 322 G---YLAEELSGRTS-IFNEKSDVYSFGILIMEIVSGRLPV-DYSQPQVFLIDWLKSMVA 376
G Y+A E+ + + + +D++S G I+E+ +G+ P + +PQ A
Sbjct: 171 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYELGEPQ----------AA 220
Query: 377 QQKIA-YVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
K+ + + P++PE S E K I L+C +PD R D+L
Sbjct: 221 MFKVGMFKVHPEIPESMS-AEAKAFI---LKCFEPDPDKRACANDLL 263
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 68.6 bits (166), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 99/213 (46%), Gaps = 30/213 (14%)
Query: 161 IASGDNGVVYRAVLLD------NMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY D R AVK + S S+ E +F+ + + ++V+
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ ++V E + +G+L+ +L EA+ P T +++ A G+A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG----- 322
YL+ K VH ++ + N ++ H + KI D G+ + I + R G
Sbjct: 145 YLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTR------DIXETDXXRKGGKGLLP 195
Query: 323 --YLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
++A E S + +F SD++SFG+++ EI S
Sbjct: 196 VRWMAPE-SLKDGVFTTSSDMWSFGVVLWEITS 227
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 160 VIASGDNGVVYRAVLL----DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
V+ +G+ G V L + A+K L + + + DF+ + +GQ H N+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
G + + ++V EY++NG+L +L + T + +++G A G+ YL +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLS---D 165
Query: 275 PKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEELSGRT 332
VH ++ + NIL++ + K+SD GL+++ PE + +T G + +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPE 220
Query: 333 SI----FNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPK 387
+I F SDV+S+GI++ E++S G P W ++ Q + +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-----------W---EMSNQDVIKAVDEG 266
Query: 388 LPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHNY 447
P + + L C D +RPK ++ +L D L+R +K S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL---DKLIRNPGSLKIITSAAAR 323
Query: 448 P 448
P
Sbjct: 324 P 324
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 133/301 (44%), Gaps = 40/301 (13%)
Query: 160 VIASGDNGVVYRAVLL----DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
V+ +G+ G V L + A+K L + + + DF+ + +GQ H N+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
G + + ++V EY++NG+L +L + T + +++G A G+ YL +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLS---D 165
Query: 275 PKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEELSGRT 332
VH ++ + NIL++ + K+SD GL ++ PE + +T G + +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTT-----RGGKIPIRWTSPE 220
Query: 333 SI----FNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPK 387
+I F SDV+S+GI++ E++S G P W ++ Q + +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-----------W---EMSNQDVIKAVDEG 266
Query: 388 LPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHNY 447
P + + L C D +RPK ++ +L D L+R +K S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL---DKLIRNPGSLKIITSAAAR 323
Query: 448 P 448
P
Sbjct: 324 P 324
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 160 VIASGDNGVVYRAVLL----DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
V+ +G+ G V L + A+K L + + + DF+ + +GQ H N+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
G + + ++V EY++NG+L +L + T + +++G A G+ YL +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLS---D 165
Query: 275 PKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEELSGRT 332
VH ++ + NIL++ + K+SD GL+++ PE + +T G + +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPE 220
Query: 333 SI----FNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPK 387
+I F SDV+S+GI++ E++S G P W ++ Q + +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-----------W---EMSNQDVIKAVDEG 266
Query: 388 LPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHNY 447
P + + L C D +RPK ++ +L D L+R +K S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL---DKLIRNPGSLKIITSAAAR 323
Query: 448 P 448
P
Sbjct: 324 P 324
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 160 VIASGDNGVVYRAVLL----DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
V+ +G+ G V L + A+K L + + + DF+ + +GQ H N+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
G + + ++V EY++NG+L +L + T + +++G A G+ YL +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLS---D 165
Query: 275 PKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEELSGRT 332
VH ++ + NIL++ + K+SD GL+++ PE + +T G + +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPE 220
Query: 333 SI----FNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPK 387
+I F SDV+S+GI++ E++S G P W ++ Q + +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-----------W---EMSNQDVIKAVDEG 266
Query: 388 LPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHNY 447
P + + L C D +RPK ++ +L D L+R +K S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL---DKLIRNPGSLKIITSAAAR 323
Query: 448 P 448
P
Sbjct: 324 P 324
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 107/224 (47%), Gaps = 20/224 (8%)
Query: 140 GIRISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMR----AAVKLLMSNSVSEEE- 194
+R KEID+ E VI +G+ G V R L + A+K L +
Sbjct: 5 AVREFAKEIDVSYVKIEE--VIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRR 62
Query: 195 DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDT 254
+F+ + +GQ +H N+++L G +++ E+++NG L +L + G+ T
Sbjct: 63 EFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ---FTVIQ 119
Query: 255 RMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL-----HGPE 309
+ +++G A G+ YL E VH ++ + NIL++ + K+SD GL++ P
Sbjct: 120 LVGMLRGIASGMRYLA---EMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPT 176
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
+ S ++ E ++ R F SD +S+GI++ E++S
Sbjct: 177 ETSSLGGKIPIRWTAPEAIAFRK--FTSASDAWSYGIVMWEVMS 218
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 179 RAAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
+ AVK+L S++ ++ D I ++E + + KHKN++ L G C + ++ EY GNL
Sbjct: 47 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 106
Query: 237 QQWLHG------------SLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+++L S + L+ + A+G+ YL K +H ++ +
Sbjct: 107 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 163
Query: 285 SNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+L+ KI+D GLA+ H + +T+ L E L R I+ +SDV+
Sbjct: 164 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR--IYTHQSDVW 221
Query: 343 SFGILIMEIVS 353
SFG+L+ EI +
Sbjct: 222 SFGVLLWEIFT 232
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 160 VIASGDNGVVYRAVLL----DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
V+ +G+ G V L + A+K L + + + DF+ + +GQ H N+++L
Sbjct: 50 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 109
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
G + + ++V EY++NG+L +L + T + +++G A G+ YL +
Sbjct: 110 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLS---D 163
Query: 275 PKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEELSGRT 332
VH ++ + NIL++ + K+SD GL+++ PE + +T G + +
Sbjct: 164 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPE 218
Query: 333 SI----FNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPK 387
+I F SDV+S+GI++ E++S G P W ++ Q + +D
Sbjct: 219 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-----------W---EMSNQDVIKAVDEG 264
Query: 388 LPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHNY 447
P + + L C D +RPK ++ +L D L+R +K S
Sbjct: 265 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL---DKLIRNPGSLKIITSAAAR 321
Query: 448 P 448
P
Sbjct: 322 P 322
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 68.2 bits (165), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 160 VIASGDNGVVYRAVLL----DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
V+ +G+ G V L + A+K L + + + DF+ + +GQ H N+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
G + + ++V EY++NG+L +L + T + +++G A G+ YL +
Sbjct: 112 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLS---D 165
Query: 275 PKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEELSGRT 332
VH ++ + NIL++ + K+SD GL+++ PE + +T G + +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPE 220
Query: 333 SI----FNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPK 387
+I F SDV+S+GI++ E++S G P W ++ Q + +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-----------W---EMSNQDVIKAVDEG 266
Query: 388 LPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHNY 447
P + + L C D +RPK ++ +L D L+R +K S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL---DKLIRNPGSLKIITSAAAR 323
Query: 448 P 448
P
Sbjct: 324 P 324
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 111/222 (50%), Gaps = 32/222 (14%)
Query: 143 ISLKEIDIV-TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVE 201
+++KE+ ++ T G E + GD YR + AVK + +++ ++ F+ +
Sbjct: 3 LNMKELKLLQTIGKGEFGDVMLGD----YRG-----NKVAVKCIKNDATAQA--FLAEAS 51
Query: 202 AIGQVKHKNLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQ 260
+ Q++H NLV+L G VE + + +V EY+ G+L +L S G + L D +K
Sbjct: 52 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLR-SRGRS-VLGGDCLLKFSL 109
Query: 261 GTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRN 320
+ + YL + VH ++ + N+L+ K+SD GL K + ++
Sbjct: 110 DVCEAMEYLEGN---NFVHRDLAARNVLVSEDNVAKVSDFGLTK---------EASSTQD 157
Query: 321 SGYLAEELSG----RTSIFNEKSDVYSFGILIMEIVS-GRLP 357
+G L + + R F+ KSDV+SFGIL+ EI S GR+P
Sbjct: 158 TGKLPVKWTAPEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 179 RAAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
+ AVK+L S++ ++ D I ++E + + KHKN++ L G C + ++ EY GNL
Sbjct: 55 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 114
Query: 237 QQWLHG------------SLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+++L S + L+ + A+G+ YL K +H ++ +
Sbjct: 115 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 171
Query: 285 SNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+L+ KI+D GLA+ H + +T+ L E L R I+ +SDV+
Sbjct: 172 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR--IYTHQSDVW 229
Query: 343 SFGILIMEIVS 353
SFG+L+ EI +
Sbjct: 230 SFGVLLWEIFT 240
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 179 RAAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
+ AVK+L S++ ++ D I ++E + + KHKN++ L G C + ++ EY GNL
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 237 QQWLHG------------SLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+++L S + L+ + A+G+ YL K +H ++ +
Sbjct: 122 REYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 178
Query: 285 SNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+L+ KI+D GLA+ H + +T+ L E L R I+ +SDV+
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR--IYTHQSDVW 236
Query: 343 SFGILIMEIVS 353
SFG+L+ EI +
Sbjct: 237 SFGVLLWEIFT 247
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/301 (23%), Positives = 134/301 (44%), Gaps = 40/301 (13%)
Query: 160 VIASGDNGVVYRAVLL----DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
V+ +G+ G V L + A+K L + + + DF+ + +GQ H N+++L
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
G + + ++V EY++NG+L +L + T + +++G A G+ YL +
Sbjct: 83 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLS---D 136
Query: 275 PKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEELSGRT 332
VH ++ + NIL++ + K+SD GL+++ PE + +T G + +
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPE 191
Query: 333 SI----FNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPK 387
+I F SDV+S+GI++ E++S G P W ++ Q + +D
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-----------W---EMSNQDVIKAVDEG 237
Query: 388 LPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHNY 447
P + + L C D +RPK ++ +L D L+R +K S
Sbjct: 238 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL---DKLIRNPGSLKIITSAAAR 294
Query: 448 P 448
P
Sbjct: 295 P 295
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 179 RAAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
+ AVK+L S++ ++ D I ++E + + KHKN++ L G C + ++ EY GNL
Sbjct: 51 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 110
Query: 237 QQWLHG------------SLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+++L S + L+ + A+G+ YL K +H ++ +
Sbjct: 111 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 167
Query: 285 SNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+L+ KI+D GLA+ H + +T+ L E L R I+ +SDV+
Sbjct: 168 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR--IYTHQSDVW 225
Query: 343 SFGILIMEIVS 353
SFG+L+ EI +
Sbjct: 226 SFGVLLWEIFT 236
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/301 (24%), Positives = 133/301 (44%), Gaps = 40/301 (13%)
Query: 160 VIASGDNGVVYRAVLL----DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
V+ +G+ G V L + A+K L + + + DF+ + +GQ H N+++L
Sbjct: 40 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 99
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
G + + ++V EY++NG+L +L + T + +++G A G+ YL +
Sbjct: 100 EGVVTKSKPVMIVTEYMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLS---D 153
Query: 275 PKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEELSGRT 332
VH ++ + NIL++ + K+SD GL+++ PE + +T G + +
Sbjct: 154 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPE 208
Query: 333 SI----FNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPK 387
+I F SDV+S+GI++ E++S G P W S Q + +D
Sbjct: 209 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-----------WEMS---NQDVIKAVDEG 254
Query: 388 LPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHNY 447
P + + L C D +RPK ++ +L D L+R +K S
Sbjct: 255 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL---DKLIRNPGSLKIITSAAAR 311
Query: 448 P 448
P
Sbjct: 312 P 312
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 102/210 (48%), Gaps = 32/210 (15%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ ++ + AVK L ++S + F+E+ + ++H LV+L+
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVTR 79
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAK--PLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+ ++ EY+ G+L +L G P D +I A+G+AY+ +
Sbjct: 80 EEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI----AEGMAYIERK---NYI 132
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKL---------HGPEWSIS-TSCELRNSGYLAEEL 328
H +++++N+L+ KI+D GLA++ G ++ I T+ E N G
Sbjct: 133 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG------ 186
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
F KSDV+SFGIL+ EIV+ G++P
Sbjct: 187 -----CFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 179 RAAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
+ AVK+L S++ ++ D I ++E + + KHKN++ L G C + ++ EY GNL
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 237 QQWLHG------------SLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+++L S + L+ + A+G+ YL K +H ++ +
Sbjct: 122 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 178
Query: 285 SNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+L+ KI+D GLA+ H + +T+ L E L R I+ +SDV+
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR--IYTHQSDVW 236
Query: 343 SFGILIMEIVS 353
SFG+L+ EI +
Sbjct: 237 SFGVLLWEIFT 247
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 121/268 (45%), Gaps = 39/268 (14%)
Query: 181 AVKLLMSNSVSE-EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQW 239
AVK+L + ++ + DF + + + + N+VKL G C G+ L++EY+ G+L ++
Sbjct: 81 AVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEF 140
Query: 240 L------------HGSLGE--------AKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
L H L PL+ ++ I + A G+AYL E K VH
Sbjct: 141 LRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIARQVAAGMAYLSER---KFVH 197
Query: 280 HNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEK 338
++ + N L+ + KI+D GL++ ++ ++ + + ++ E S + + +
Sbjct: 198 RDLATRNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPE-SIFYNRYTTE 256
Query: 339 SDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELK 398
SDV+++G+++ EI S L QP M ++ I YV D + P L+
Sbjct: 257 SDVWAYGVVLWEIFSYGL-----QPYY-------GMAHEEVIYYVRDGNILACPENCPLE 304
Query: 399 RIILIALRCVDPDIKHRPKMGDVLRMLE 426
L+ L C RP + R+L+
Sbjct: 305 LYNLMRL-CWSKLPADRPSFCSIHRILQ 331
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 179 RAAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
+ AVK+L S++ ++ D I ++E + + KHKN++ L G C + ++ EY GNL
Sbjct: 54 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 113
Query: 237 QQWLHG------------SLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+++L S + L+ + A+G+ YL K +H ++ +
Sbjct: 114 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 170
Query: 285 SNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+L+ KI+D GLA+ H + +T+ L E L R I+ +SDV+
Sbjct: 171 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR--IYTHQSDVW 228
Query: 343 SFGILIMEIVS 353
SFG+L+ EI +
Sbjct: 229 SFGVLLWEIFT 239
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 101/201 (50%), Gaps = 11/201 (5%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G GVV A+K++ S+SE+E FIE+ + + + H+ LV+L+G C +
Sbjct: 32 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDE-FIEEAKVMMNLSHEKLVQLYGVCTK 90
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
+ ++ EY+ NG L +L + +++ + + + YL + +H
Sbjct: 91 QRPIFIITEYMANGCLLNYLREMRHRFQT---QQLLEMCKDVCEAMEYLESK---QFLHR 144
Query: 281 NMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++ + N L++ K+SD GL++ + E + S + E L S F+ KS
Sbjct: 145 DLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVL--MYSKFSSKS 202
Query: 340 DVYSFGILIMEIVS-GRLPVD 359
D+++FG+L+ EI S G++P +
Sbjct: 203 DIWAFGVLMWEIYSLGKMPYE 223
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 179 RAAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
+ AVK+L S++ ++ D I ++E + + KHKN++ L G C + ++ EY GNL
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 237 QQWLHG------------SLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+++L S + L+ + A+G+ YL K +H ++ +
Sbjct: 122 REYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 178
Query: 285 SNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+L+ KI+D GLA+ H + +T+ L E L R I+ +SDV+
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR--IYTHQSDVW 236
Query: 343 SFGILIMEIVS 353
SFG+L+ EI +
Sbjct: 237 SFGVLLWEIFT 247
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 23/213 (10%)
Query: 158 QNVIASGDNGVVYRAVLLDN---MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHK-NLV 212
Q+VI G+ G V +A + + M AA+K + S + DF ++E + ++ H N++
Sbjct: 30 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 89
Query: 213 KLFGYCVEGQNRILVYEYIDNGNLQQWLHGSL------------GEAKPLTWDTRMKIIQ 260
L G C L EY +GNL +L S A L+ +
Sbjct: 90 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 149
Query: 261 GTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRN 320
A+G+ YL + + +H ++ + NIL+ ++ KI+D GL++ G E + +
Sbjct: 150 DVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLP 204
Query: 321 SGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
++A E S S++ SDV+S+G+L+ EIVS
Sbjct: 205 VRWMAIE-SLNYSVYTTNSDVWSYGVLLWEIVS 236
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 102/213 (47%), Gaps = 23/213 (10%)
Query: 158 QNVIASGDNGVVYRAVLLDN---MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHK-NLV 212
Q+VI G+ G V +A + + M AA+K + S + DF ++E + ++ H N++
Sbjct: 20 QDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNII 79
Query: 213 KLFGYCVEGQNRILVYEYIDNGNLQQWLHGSL------------GEAKPLTWDTRMKIIQ 260
L G C L EY +GNL +L S A L+ +
Sbjct: 80 NLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAA 139
Query: 261 GTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRN 320
A+G+ YL + + +H ++ + NIL+ ++ KI+D GL++ G E + +
Sbjct: 140 DVARGMDYLSQ---KQFIHRDLAARNILVGENYVAKIADFGLSR--GQEVYVKKTMGRLP 194
Query: 321 SGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
++A E S S++ SDV+S+G+L+ EIVS
Sbjct: 195 VRWMAIE-SLNYSVYTTNSDVWSYGVLLWEIVS 226
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 93/191 (48%), Gaps = 21/191 (10%)
Query: 179 RAAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
+ AVK+L S++ ++ D I ++E + + KHKN++ L G C + ++ EY GNL
Sbjct: 103 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 162
Query: 237 QQWLHG------------SLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+++L S + L+ + A+G+ YL K +H ++ +
Sbjct: 163 REYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 219
Query: 285 SNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+L+ KI+D GLA+ H + +T+ L E L R I+ +SDV+
Sbjct: 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDR--IYTHQSDVW 277
Query: 343 SFGILIMEIVS 353
SFG+L+ EI +
Sbjct: 278 SFGVLLWEIFT 288
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 115/243 (47%), Gaps = 26/243 (10%)
Query: 187 SNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRIL--VYEYIDNGNLQQWLHGSL 244
S + +E++ + +V + ++KH N+V+ + ++ N L V EY + G+L +
Sbjct: 43 SMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 102
Query: 245 GEAKPLTWDTRMKIIQGTAKGLAYLHE--DIEPKIVHHNMKSSNILLDHHWNPKISDVGL 302
E + L + ++++ L H D ++H ++K +N+ LD N K+ D GL
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162
Query: 303 AKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ 362
A++ + S + + + Y++ E R S +NEKSD++S G L+ E+ + P
Sbjct: 163 ARILNHDTSFAKTF-VGTPYYMSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPF---- 216
Query: 363 PQVFLIDWLKSMVAQQKIA-YVLDPKLPEMPSR--KELKRIILIALRCVDPDIKHRPKMG 419
+ +Q+++A + + K +P R EL II L D HRP +
Sbjct: 217 ----------TAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKD---YHRPSVE 263
Query: 420 DVL 422
++L
Sbjct: 264 EIL 266
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/243 (24%), Positives = 115/243 (47%), Gaps = 26/243 (10%)
Query: 187 SNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRIL--VYEYIDNGNLQQWLHGSL 244
S + +E++ + +V + ++KH N+V+ + ++ N L V EY + G+L +
Sbjct: 43 SMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 102
Query: 245 GEAKPLTWDTRMKIIQGTAKGLAYLHE--DIEPKIVHHNMKSSNILLDHHWNPKISDVGL 302
E + L + ++++ L H D ++H ++K +N+ LD N K+ D GL
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162
Query: 303 AKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ 362
A++ + S + + + Y++ E R S +NEKSD++S G L+ E+ + P
Sbjct: 163 ARILNHDTSFAKAF-VGTPYYMSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPF---- 216
Query: 363 PQVFLIDWLKSMVAQQKIA-YVLDPKLPEMPSR--KELKRIILIALRCVDPDIKHRPKMG 419
+ +Q+++A + + K +P R EL II L D HRP +
Sbjct: 217 ----------TAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKD---YHRPSVE 263
Query: 420 DVL 422
++L
Sbjct: 264 EIL 266
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 97/196 (49%), Gaps = 26/196 (13%)
Query: 180 AAVKLLMSN-SVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK+L N S SE D + + + QV H +++KL+G C + +L+ EY G+L+
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 239 WLHGS--LG------------------EAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+L S +G + + LT + ++G+ YL E K+V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLV 172
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + NIL+ KISD GL++ ++ + + S ++A E S I+
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIE-SLFDHIYTT 231
Query: 338 KSDVYSFGILIMEIVS 353
+SDV+SFG+L+ EIV+
Sbjct: 232 QSDVWSFGVLLWEIVT 247
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 92/191 (48%), Gaps = 21/191 (10%)
Query: 179 RAAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
+ AVK+L S++ ++ D I ++E + + KHKN++ L G C + ++ EY GNL
Sbjct: 62 KVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNL 121
Query: 237 QQWLHG------------SLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+++L S + L+ + A+G+ YL K +H ++ +
Sbjct: 122 REYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASK---KCIHRDLAA 178
Query: 285 SNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+L+ KI+D GLA+ H +T+ L E L R I+ +SDV+
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDR--IYTHQSDVW 236
Query: 343 SFGILIMEIVS 353
SFG+L+ EI +
Sbjct: 237 SFGVLLWEIFT 247
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 40 LGGGQYGEVYVGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 98
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
+V EY+ GNL +L E + ++ A ++ E +E K +
Sbjct: 99 LEPPFYIVTEYMPYGNLLDYLRECNRE------EVTAVVLLYMATQISSAMEYLEKKNFI 152
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLH-GPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ T F+
Sbjct: 153 HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNT--FSI 210
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 211 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 239
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/196 (30%), Positives = 96/196 (48%), Gaps = 26/196 (13%)
Query: 180 AAVKLLMSN-SVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK+L N S SE D + + + QV H +++KL+G C + +L+ EY G+L+
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 239 WLHGS--LG------------------EAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+L S +G + + LT + ++G+ YL E K+V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMKLV 172
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELR-NSGYLAEELSGRTSIFNE 337
H ++ + NIL+ KISD GL++ E S + R ++A E S I+
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPVKWMAIE-SLFDHIYTT 231
Query: 338 KSDVYSFGILIMEIVS 353
+SDV+SFG+L+ EIV+
Sbjct: 232 QSDVWSFGVLLWEIVT 247
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 93/200 (46%), Gaps = 41/200 (20%)
Query: 180 AAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
AVK+L ++ E+ D + ++E + + KHKN++ L G C + ++ EY GNL+
Sbjct: 70 VAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 238 QWLHGSLGEAKPLTWD---------TRMKIIQGT---AKGLAYLHEDIEPKIVHHNMKSS 285
++L ++D T ++ T A+G+ YL K +H ++ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 286 NILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTS------------ 333
N+L+ + KI+D GLA+ ++ N Y + +GR
Sbjct: 187 NVLVTENNVMKIADFGLAR------------DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 334 IFNEKSDVYSFGILIMEIVS 353
++ +SDV+SFG+L+ EI +
Sbjct: 235 VYTHQSDVWSFGVLMWEIFT 254
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 17/191 (8%)
Query: 174 LLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEY 230
+L AVK++ NS S ++ F E V + + H N+VKLF + LV EY
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 94
Query: 231 IDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNIL 288
G + +L HG + E + R K Q + Y H+ IVH ++K+ N+L
Sbjct: 95 ASGGEVFDYLVAHGRMKEK-----EARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 289 LDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILI 348
LD N KI+D G + + T C + Y A EL + DV+S G+++
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDTFCG--SPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 349 MEIVSGRLPVD 359
+VSG LP D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 17/191 (8%)
Query: 174 LLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEY 230
+L AVK++ NS S ++ F E V + + H N+VKLF + LV EY
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 94
Query: 231 IDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNIL 288
G + +L HG + E + R K Q + Y H+ IVH ++K+ N+L
Sbjct: 95 ASGGEVFDYLVAHGRMKEK-----EARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 289 LDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILI 348
LD N KI+D G + + T C + Y A EL + DV+S G+++
Sbjct: 146 LDADMNIKIADFGFSNEFTFGNKLDTFCG--SPPYAAPELFQGKKYDGPEVDVWSLGVIL 203
Query: 349 MEIVSGRLPVD 359
+VSG LP D
Sbjct: 204 YTLVSGSLPFD 214
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 66.6 bits (161), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 20/192 (10%)
Query: 175 LDNMRAAVKLLMSNSVSEEEDFIEKV----EAIGQVKHKNLVKLFGYCVEGQNRILVYEY 230
L + AVK+L + D + K+ + + +H +++KL+ + +V EY
Sbjct: 39 LTGHKVAVKILNRQKI-RSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEY 97
Query: 231 IDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNIL 288
+ G L ++ +G L E + ++ Q G+ Y H + +VH ++K N+L
Sbjct: 98 VSGGELFDYICKNGRLDEKE------SRRLFQQILSGVDYCHRHM---VVHRDLKPENVL 148
Query: 289 LDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE-LSGRTSIFNEKSDVYSFGIL 347
LD H N KI+D GL+ + + SC N Y A E +SGR E D++S G++
Sbjct: 149 LDAHMNAKIADFGLSNMMSDGEFLRXSCGSPN--YAAPEVISGRLYAGPE-VDIWSSGVI 205
Query: 348 IMEIVSGRLPVD 359
+ ++ G LP D
Sbjct: 206 LYALLCGTLPFD 217
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 115/265 (43%), Gaps = 30/265 (11%)
Query: 164 GDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQN 223
GD G ++ +L +K+L + E F E + ++ HK+LV +G CV G
Sbjct: 33 GDYGQLHETEVL------LKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCVCGDE 86
Query: 224 RILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMK 283
ILV E++ G+L +L + + W ++++ + A + +L E+ ++H N+
Sbjct: 87 NILVQEFVKFGSLDTYLKKN-KNCINILW--KLEVAKQLAAAMHFLEENT---LIHGNVC 140
Query: 284 SSNILLDHHWNPKISDVGLAKLHGPEWSIST---SCELRNSGYLAEELSGRTSIFNEKSD 340
+ NILL + K + KL P SI+ ++ E N +D
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATD 200
Query: 341 VYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRI 400
+SFG + EI SG +P L ++ +Q+K+ + D P EL +
Sbjct: 201 KWSFGTTLWEICSGG-----DKP-------LSALDSQRKLQFYEDRHQLPAPKAAELANL 248
Query: 401 ILIALRCVDPDIKHRPKMGDVLRML 425
I C+D + HRP ++R L
Sbjct: 249 I---NNCMDYEPDHRPSFRAIIRDL 270
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/212 (25%), Positives = 101/212 (47%), Gaps = 24/212 (11%)
Query: 159 NVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYC 218
+ A G G V++A L+++ A + + S + + ++ + +KH+NL++
Sbjct: 21 EIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSE--REIFSTPGMKHENLLQFIAAE 78
Query: 219 VEGQNR----ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI- 273
G N L+ + D G+L +L G++ +TW+ + + ++GL+YLHED+
Sbjct: 79 KRGSNLEVELWLITAFHDKGSLTDYLKGNI-----ITWNELCHVAETMSRGLSYLHEDVP 133
Query: 274 -------EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGP-EWSISTSCELRNSGYLA 325
+P I H + KS N+LL ++D GLA P + T ++ Y+A
Sbjct: 134 WCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMA 193
Query: 326 EELSGRTSIFNEKS----DVYSFGILIMEIVS 353
E+ F + D+Y+ G+++ E+VS
Sbjct: 194 PEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 41/200 (20%)
Query: 180 AAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
AVK+L ++ ++ D + ++E + + KHKN++ L G C + ++ EY GNL+
Sbjct: 116 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 175
Query: 238 QWLHGSLGEAKPLTWD---------TRMKIIQGT---AKGLAYLHEDIEPKIVHHNMKSS 285
++L ++D T ++ T A+G+ YL K +H ++ +
Sbjct: 176 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 232
Query: 286 NILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTS------------ 333
N+L+ + KI+D GLA+ ++ N Y + +GR
Sbjct: 233 NVLVTENNVMKIADFGLAR------------DINNIDYYKKTTNGRLPVKWMAPEALFDR 280
Query: 334 IFNEKSDVYSFGILIMEIVS 353
++ +SDV+SFG+L+ EI +
Sbjct: 281 VYTHQSDVWSFGVLMWEIFT 300
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 53/192 (27%), Positives = 92/192 (47%), Gaps = 20/192 (10%)
Query: 175 LDNMRAAVKLLMSNSVSEEEDFIEKV----EAIGQVKHKNLVKLFGYCVEGQNRILVYEY 230
L + AVK+L + D + K+ + + +H +++KL+ + +V EY
Sbjct: 34 LTGHKVAVKILNRQKI-RSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY 92
Query: 231 IDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNIL 288
+ G L ++ HG + E + ++ Q + Y H + +VH ++K N+L
Sbjct: 93 VSGGELFDYICKHGRVEEMEA------RRLFQQILSAVDYCHRHM---VVHRDLKPENVL 143
Query: 289 LDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE-LSGRTSIFNEKSDVYSFGIL 347
LD H N KI+D GL+ + + TSC N Y A E +SGR E D++S G++
Sbjct: 144 LDAHMNAKIADFGLSNMMSDGEFLRTSCGSPN--YAAPEVISGRLYAGPE-VDIWSCGVI 200
Query: 348 IMEIVSGRLPVD 359
+ ++ G LP D
Sbjct: 201 LYALLCGTLPFD 212
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 65.9 bits (159), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/174 (31%), Positives = 81/174 (46%), Gaps = 14/174 (8%)
Query: 188 NSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWL--HGSLG 245
NS S ++ F E V + + H N+VKLF + LV EY G + +L HG +
Sbjct: 53 NSSSLQKLFRE-VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 246 EAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL 305
E + R K Q + Y H+ IVH ++K+ N+LLD N KI+D G +
Sbjct: 112 EK-----EARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 306 HGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
+ T C + Y A EL + DV+S G+++ +VSG LP D
Sbjct: 163 FTFGNKLDTFCG--SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 132/282 (46%), Gaps = 20/282 (7%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLL-DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKN 210
D + Q VI SG VV A + A+K + + + ++ +++++A+ Q H N
Sbjct: 10 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 69
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSL--GEAKPLTWD--TRMKIIQGTAKGL 266
+V + V LV + + G++ + + GE K D T I++ +GL
Sbjct: 70 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 129
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS----- 321
YLH++ + +H ++K+ NILL + +I+D G++ I T ++R +
Sbjct: 130 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI-TRNKVRKTFVGTP 185
Query: 322 GYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIA 381
++A E+ + ++ K+D++SFGI +E+ +G P P L+ L++ +
Sbjct: 186 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 245
Query: 382 YVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLR 423
V D ++ + + K I L C+ D + RP ++LR
Sbjct: 246 -VQDKEMLKKYGKSFRKMISL----CLQKDPEKRPTAAELLR 282
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 133/301 (44%), Gaps = 40/301 (13%)
Query: 160 VIASGDNGVVYRAVLL----DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
V+ +G+ G V L + A+K L + + + DF+ + +GQ H N+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
G + + ++V E ++NG+L +L + T + +++G A G+ YL +
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLS---D 165
Query: 275 PKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEELSGRT 332
VH ++ + NIL++ + K+SD GL+++ PE + +T G + +
Sbjct: 166 MGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPE 220
Query: 333 SI----FNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPK 387
+I F SDV+S+GI++ E++S G P W ++ Q + +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-----------W---EMSNQDVIKAVDEG 266
Query: 388 LPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHNY 447
P + + L C D +RPK ++ +L D L+R +K S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL---DKLIRNPGSLKIITSAAAR 323
Query: 448 P 448
P
Sbjct: 324 P 324
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 65.5 bits (158), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 132/282 (46%), Gaps = 20/282 (7%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLL-DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKN 210
D + Q VI SG VV A + A+K + + + ++ +++++A+ Q H N
Sbjct: 15 DDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPN 74
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSL--GEAKPLTWD--TRMKIIQGTAKGL 266
+V + V LV + + G++ + + GE K D T I++ +GL
Sbjct: 75 IVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGL 134
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS----- 321
YLH++ + +H ++K+ NILL + +I+D G++ I T ++R +
Sbjct: 135 EYLHKNGQ---IHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDI-TRNKVRKTFVGTP 190
Query: 322 GYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIA 381
++A E+ + ++ K+D++SFGI +E+ +G P P L+ L++ +
Sbjct: 191 CWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETG 250
Query: 382 YVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLR 423
V D ++ + + K I L C+ D + RP ++LR
Sbjct: 251 -VQDKEMLKKYGKSFRKMISL----CLQKDPEKRPTAAELLR 287
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 41/200 (20%)
Query: 180 AAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
AVK+L ++ ++ D + ++E + + KHKN++ L G C + ++ EY GNL+
Sbjct: 57 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 116
Query: 238 QWLHGSLGEAKPLTWD---------TRMKIIQGT---AKGLAYLHEDIEPKIVHHNMKSS 285
++L ++D T ++ T A+G+ YL K +H ++ +
Sbjct: 117 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLTAR 173
Query: 286 NILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTS------------ 333
N+L+ + KI+D GLA+ ++ N Y + +GR
Sbjct: 174 NVLVTENNVMKIADFGLAR------------DINNIDYYKKTTNGRLPVKWMAPEALFDR 221
Query: 334 IFNEKSDVYSFGILIMEIVS 353
++ +SDV+SFG+L+ EI +
Sbjct: 222 VYTHQSDVWSFGVLMWEIFT 241
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 100/207 (48%), Gaps = 16/207 (7%)
Query: 160 VIASGDNGVVYRAVLLDN----MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
VI G GVVY +D ++ A+K L + + E F+ + + + H N++ L
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 215 FGYCV--EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
G + EG +L+ Y+ +G+L Q++ + P D +Q A+G+ YL E
Sbjct: 88 IGIMLPPEGLPHVLL-PYMCHGDLLQFIRSP--QRNPTVKDLISFGLQ-VARGMEYLAEQ 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSG 330
K VH ++ + N +LD + K++D GLA+ L +S+ R S
Sbjct: 144 ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESL 200
Query: 331 RTSIFNEKSDVYSFGILIMEIVSGRLP 357
+T F KSDV+SFG+L+ E+++ P
Sbjct: 201 QTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 65.5 bits (158), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 91/207 (43%), Gaps = 16/207 (7%)
Query: 158 QNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSV--SEEEDFIEKVEAIGQVKHKNLVKL 214
Q I G+ V A +L AVK++ + + + +V + + H N+VKL
Sbjct: 20 QKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKL 79
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
F + LV EY G + +L HG + E + R K Q + Y H+
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----EARAKFRQ-IVSAVQYCHQK 133
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
IVH ++K+ N+LLD N KI+D G + + T C + Y A EL
Sbjct: 134 Y---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDTFC--GSPPYAAPELFQGK 188
Query: 333 SIFNEKSDVYSFGILIMEIVSGRLPVD 359
+ DV+S G+++ +VSG LP D
Sbjct: 189 KYDGPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 88/191 (46%), Gaps = 17/191 (8%)
Query: 174 LLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEY 230
+L AVK++ NS S ++ F E V + + H N+VKLF + LV EY
Sbjct: 29 ILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 87
Query: 231 IDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNIL 288
G + +L HG + E + R K Q + Y H+ IVH ++K+ N+L
Sbjct: 88 ASGGEVFDYLVAHGWMKEK-----EARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLL 138
Query: 289 LDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILI 348
LD N KI+D G + + T C + Y A EL + DV+S G+++
Sbjct: 139 LDADMNIKIADFGFSNEFTFGNKLDTFCG--SPPYAAPELFQGKKYDGPEVDVWSLGVIL 196
Query: 349 MEIVSGRLPVD 359
+VSG LP D
Sbjct: 197 YTLVSGSLPFD 207
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 76/154 (49%), Gaps = 10/154 (6%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
++H +++KL+ + ++V EY G L ++ E K +T D + Q
Sbjct: 66 LRHPHIIKLYDVITTPTDIVMVIEYA-GGELFDYI----VEKKRMTEDEGRRFFQQIICA 120
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
+ Y H KIVH ++K N+LLD + N KI+D GL+ + + TSC N Y A
Sbjct: 121 IEYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPN--YAA 175
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
E+ + DV+S GI++ ++ GRLP D
Sbjct: 176 PEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFD 209
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 41/200 (20%)
Query: 180 AAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
AVK+L ++ ++ D + ++E + + KHKN++ L G C + ++ EY GNL+
Sbjct: 59 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 118
Query: 238 QWLHGSLGEAKPLTWD---------TRMKIIQGT---AKGLAYLHEDIEPKIVHHNMKSS 285
++L ++D T ++ T A+G+ YL K +H ++ +
Sbjct: 119 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 175
Query: 286 NILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTS------------ 333
N+L+ + KI+D GLA+ ++ N Y + +GR
Sbjct: 176 NVLVTENNVMKIADFGLAR------------DINNIDYYKKTTNGRLPVKWMAPEALFDR 223
Query: 334 IFNEKSDVYSFGILIMEIVS 353
++ +SDV+SFG+L+ EI +
Sbjct: 224 VYTHQSDVWSFGVLMWEIFT 243
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 41/200 (20%)
Query: 180 AAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
AVK+L ++ ++ D + ++E + + KHKN++ L G C + ++ EY GNL+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLR 129
Query: 238 QWLHGSLGEAKPLTWD---------TRMKIIQGT---AKGLAYLHEDIEPKIVHHNMKSS 285
++L ++D T ++ T A+G+ YL K +H ++ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 286 NILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTS------------ 333
N+L+ + KI+D GLA+ ++ N Y + +GR
Sbjct: 187 NVLVTENNVMKIADFGLAR------------DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 334 IFNEKSDVYSFGILIMEIVS 353
++ +SDV+SFG+L+ EI +
Sbjct: 235 VYTHQSDVWSFGVLMWEIFT 254
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 41/200 (20%)
Query: 180 AAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
AVK+L ++ ++ D + ++E + + KHKN++ L G C + ++ EY GNL+
Sbjct: 62 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 121
Query: 238 QWLHGSLGEAKPLTWD---------TRMKIIQGT---AKGLAYLHEDIEPKIVHHNMKSS 285
++L ++D T ++ T A+G+ YL K +H ++ +
Sbjct: 122 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 178
Query: 286 NILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTS------------ 333
N+L+ + KI+D GLA+ ++ N Y + +GR
Sbjct: 179 NVLVTENNVMKIADFGLAR------------DINNIDYYKKTTNGRLPVKWMAPEALFDR 226
Query: 334 IFNEKSDVYSFGILIMEIVS 353
++ +SDV+SFG+L+ EI +
Sbjct: 227 VYTHQSDVWSFGVLMWEIFT 246
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 103/210 (49%), Gaps = 32/210 (15%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
+ +G G V+ ++ + AVK L ++S + F+E+ + ++H LV+L+ +
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQA-FLEEANLMKTLQHDKLVRLYAVVTK 78
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAK--PLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+ ++ E++ G+L +L G P D +I A+G+AY+ +
Sbjct: 79 EEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQI----AEGMAYIERK---NYI 131
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKL---------HGPEWSIS-TSCELRNSGYLAEEL 328
H +++++N+L+ KI+D GLA++ G ++ I T+ E N G
Sbjct: 132 HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFG------ 185
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
F KS+V+SFGIL+ EIV+ G++P
Sbjct: 186 -----CFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 65.1 bits (157), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 133/301 (44%), Gaps = 40/301 (13%)
Query: 160 VIASGDNGVVYRAVLL----DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
V+ +G+ G V L + A+K L + + + DF+ + +GQ H N+++L
Sbjct: 52 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 111
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
G + + ++V E ++NG+L +L + T + +++G A G+ YL +
Sbjct: 112 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLS---D 165
Query: 275 PKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEELSGRT 332
VH ++ + NIL++ + K+SD GL+++ PE + +T G + +
Sbjct: 166 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPE 220
Query: 333 SI----FNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPK 387
+I F SDV+S+GI++ E++S G P W ++ Q + +D
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-----------W---EMSNQDVIKAVDEG 266
Query: 388 LPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHNY 447
P + + L C D +RPK ++ +L D L+R +K S
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL---DKLIRNPGSLKIITSAAAR 323
Query: 448 P 448
P
Sbjct: 324 P 324
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 286
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 287 REPPFYIITEFMTYGNLLDYLRECNRQ------EVSAVVLLYMATQISSAMEYLEKKNFI 340
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H N+ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 341 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 398
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 399 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 427
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 150 IVTDGFAEQNVIASGDNGVVYRAVLLDN-MRAAVKLLMSNSVSEE---EDFIEKVEAIGQ 205
D F + G G VY A N A+K+L + + +E ++E
Sbjct: 11 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH 70
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTA 263
++H N+++++ Y + + L+ E+ G L + L HG E + T+ ++ A
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF------MEELA 124
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
L Y HE K++H ++K N+L+ + KI+D G + +H P C + Y
Sbjct: 125 DALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLD--Y 178
Query: 324 LAEEL-SGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
L E+ G+T +EK D++ G+L E + G P D
Sbjct: 179 LPPEMIEGKTH--DEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 96/196 (48%), Gaps = 26/196 (13%)
Query: 180 AAVKLLMSN-SVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK+L N S SE D + + + QV H +++KL+G C + +L+ EY G+L+
Sbjct: 56 VAVKMLKENASPSELRDLLSEFNVLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRG 115
Query: 239 WLHGS--LG------------------EAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+L S +G + + LT + ++G+ YL E +V
Sbjct: 116 FLRESRKVGPGYLGSGGSRNSSSLDHPDERALTMGDLISFAWQISQGMQYL---AEMSLV 172
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + NIL+ KISD GL++ ++ + + S ++A E S I+
Sbjct: 173 HRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXVKRSQGRIPVKWMAIE-SLFDHIYTT 231
Query: 338 KSDVYSFGILIMEIVS 353
+SDV+SFG+L+ EIV+
Sbjct: 232 QSDVWSFGVLLWEIVT 247
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 325
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 326 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 379
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H N+ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 380 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 437
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 438 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 466
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 98/190 (51%), Gaps = 21/190 (11%)
Query: 180 AAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
AVK+L ++ ++ D + ++E + + KHKN++ L G C + ++ EY GNL+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 238 QWLHGSLGEAKPLTWD---------TRMKIIQGT---AKGLAYLHEDIEPKIVHHNMKSS 285
++L ++D T ++ T A+G+ YL K +H ++ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 286 NILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLA-EELSGRTSIFNEKSDVYS 343
N+L+ + KI+D GLA+ ++ ++ +T+ ++A E L R ++ +SDV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDR--VYTHQSDVWS 244
Query: 344 FGILIMEIVS 353
FG+L+ EI +
Sbjct: 245 FGVLMWEIFT 254
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 15/190 (7%)
Query: 174 LLDNMRAAVKLLMSNSV--SEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYI 231
+L A+K++ + + + +V + + H N+VKLF + L+ EY
Sbjct: 34 ILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 93
Query: 232 DNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
G + +L HG + E + R K Q + Y H+ +IVH ++K+ N+LL
Sbjct: 94 SGGEVFDYLVAHGRMKEK-----EARSKFRQ-IVSAVQYCHQK---RIVHRDLKAENLLL 144
Query: 290 DHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIM 349
D N KI+D G + + T C + Y A EL + DV+S G+++
Sbjct: 145 DADMNIKIADFGFSNEFTVGGKLDTFC--GSPPYAAPELFQGKKYDGPEVDVWSLGVILY 202
Query: 350 EIVSGRLPVD 359
+VSG LP D
Sbjct: 203 TLVSGSLPFD 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 65.1 bits (157), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 150 IVTDGFAEQNVIASGDNGVVYRAVLLDN-MRAAVKLLMSNSVSEE---EDFIEKVEAIGQ 205
D F + G G VY A N A+K+L + + +E ++E
Sbjct: 12 FTIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH 71
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTA 263
++H N+++++ Y + + L+ E+ G L + L HG E + T+ ++ A
Sbjct: 72 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF------MEELA 125
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
L Y HE K++H ++K N+L+ + KI+D G + +H P C + Y
Sbjct: 126 DALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLD--Y 179
Query: 324 LAEEL-SGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
L E+ G+T +EK D++ G+L E + G P D
Sbjct: 180 LPPEMIEGKTH--DEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 133/301 (44%), Gaps = 40/301 (13%)
Query: 160 VIASGDNGVVYRAVLL----DNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
V+ +G+ G V L + A+K L + + + DF+ + +GQ H N+++L
Sbjct: 23 VVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRL 82
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
G + + ++V E ++NG+L +L + T + +++G A G+ YL +
Sbjct: 83 EGVVTKSKPVMIVTEXMENGSLDSFLRKHDAQ---FTVIQLVGMLRGIASGMKYLS---D 136
Query: 275 PKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEELSGRT 332
VH ++ + NIL++ + K+SD GL+++ PE + +T G + +
Sbjct: 137 MGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTT-----RGGKIPIRWTSPE 191
Query: 333 SI----FNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPK 387
+I F SDV+S+GI++ E++S G P W ++ Q + +D
Sbjct: 192 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY-----------W---EMSNQDVIKAVDEG 237
Query: 388 LPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHNY 447
P + + L C D +RPK ++ +L D L+R +K S
Sbjct: 238 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSIL---DKLIRNPGSLKIITSAAAR 294
Query: 448 P 448
P
Sbjct: 295 P 295
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/217 (25%), Positives = 98/217 (45%), Gaps = 21/217 (9%)
Query: 150 IVTDGFAEQNVIASGDNGVVYRAVLLDN-MRAAVKLLMSNSVSEE---EDFIEKVEAIGQ 205
D F + G G VY A N A+K+L + + +E ++E
Sbjct: 11 FTIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSH 70
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTA 263
++H N+++++ Y + + L+ E+ G L + L HG E + T+ ++ A
Sbjct: 71 LRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF------MEELA 124
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
L Y HE K++H ++K N+L+ + KI+D G + +H P C + Y
Sbjct: 125 DALHYCHER---KVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLD--Y 178
Query: 324 LAEEL-SGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
L E+ G+T +EK D++ G+L E + G P D
Sbjct: 179 LPPEMIEGKTH--DEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 106/220 (48%), Gaps = 21/220 (9%)
Query: 164 GDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQ 222
GD G VY+A + ++ AA K++ + S E ED++ +++ + H N+VKL
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFYYEN 80
Query: 223 NRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNM 282
N ++ E+ G + + L +PLT + + T L YLH++ KI+H ++
Sbjct: 81 NLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDN---KIIHRDL 134
Query: 283 KSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-----YLAEEL----SGRTS 333
K+ NIL + K++D G++ + T + R+S ++A E+ + +
Sbjct: 135 KAGNILFTLDGDIKLADFGVSAKN-----TRTXIQRRDSFIGTPYWMAPEVVMCETSKDR 189
Query: 334 IFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKS 373
++ K+DV+S GI ++E+ P P L+ KS
Sbjct: 190 PYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS 229
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 93/200 (46%), Gaps = 41/200 (20%)
Query: 180 AAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
AVK+L ++ ++ D + ++E + + KHKN++ L G C + ++ EY GNL+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIIHLLGACTQDGPLYVIVEYASKGNLR 129
Query: 238 QWLHGSLGEAKPLTWD---------TRMKIIQGT---AKGLAYLHEDIEPKIVHHNMKSS 285
++L ++D T ++ T A+G+ YL K +H ++ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 286 NILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTS------------ 333
N+L+ + KI+D GLA+ ++ N Y + +GR
Sbjct: 187 NVLVTENNVMKIADFGLAR------------DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 334 IFNEKSDVYSFGILIMEIVS 353
++ +SDV+SFG+L+ EI +
Sbjct: 235 VYTHQSDVWSFGVLMWEIFT 254
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 283
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 284 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 337
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H N+ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 338 HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 395
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 396 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 424
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/243 (24%), Positives = 113/243 (46%), Gaps = 26/243 (10%)
Query: 187 SNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRIL--VYEYIDNGNLQQWLHGSL 244
S + +E++ + +V + ++KH N+V+ + ++ N L V EY + G+L +
Sbjct: 43 SMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGT 102
Query: 245 GEAKPLTWDTRMKIIQGTAKGLAYLHE--DIEPKIVHHNMKSSNILLDHHWNPKISDVGL 302
E + L + ++++ L H D ++H ++K +N+ LD N K+ D GL
Sbjct: 103 KERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGL 162
Query: 303 AKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ 362
A++ + + + Y++ E R S +NEKSD++S G L+ E+ + P
Sbjct: 163 ARILNHDEDFAKEF-VGTPYYMSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPF---- 216
Query: 363 PQVFLIDWLKSMVAQQKIA-YVLDPKLPEMPSR--KELKRIILIALRCVDPDIKHRPKMG 419
+ +Q+++A + + K +P R EL II L D HRP +
Sbjct: 217 ----------TAFSQKELAGKIREGKFRRIPYRYSDELNEIITRMLNLKD---YHRPSVE 263
Query: 420 DVL 422
++L
Sbjct: 264 EIL 266
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 123/267 (46%), Gaps = 34/267 (12%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ EY+ G+L+
Sbjct: 43 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 102
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTA---KGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
+L K +K++Q T+ KG+ YL + +H N+ + NIL+++
Sbjct: 103 DYLQ------KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRNLATRNILVENENR 153
Query: 295 PKISDVGLAKLHGPE---WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GL K+ + + + E Y E L+ S F+ SDV+SFG+++ E+
Sbjct: 154 VKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYEL 211
Query: 352 VSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILI 403
+ + S P F+ M+ K ++ L E + + L R I +I
Sbjct: 212 FT-YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 265
Query: 404 ALRCVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 266 MTECWNNNVNQRPSFRDLALRVDQIRD 292
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 109/219 (49%), Gaps = 15/219 (6%)
Query: 146 KEIDIVTDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIE-KVEAI 203
K+ D + + I +G V A +L A+K++ N++ + I+ ++EA+
Sbjct: 3 KDYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEAL 62
Query: 204 GQVKHKNLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGT 262
++H+++ +L+ + +E N+I +V EY G L ++ + + + +TR+ + +
Sbjct: 63 KNLRHQHICQLY-HVLETANKIFMVLEYCPGGELFDYI---ISQDRLSEEETRV-VFRQI 117
Query: 263 AKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGL-AKLHG-PEWSISTSCELRN 320
+AY+H H ++K N+L D + K+ D GL AK G ++ + T C +
Sbjct: 118 VSAVAYVHSQ---GYAHRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCC--GS 172
Query: 321 SGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
Y A EL S ++DV+S GIL+ ++ G LP D
Sbjct: 173 LAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFD 211
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 85 REPPFYIIIEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLH-GPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 196
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 93/200 (46%), Gaps = 41/200 (20%)
Query: 180 AAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
AVK+L ++ ++ D + ++E + + KHKN++ L G C + ++ EY GNL+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 238 QWLHGSLGEAKPLTWD---------TRMKIIQGT---AKGLAYLHEDIEPKIVHHNMKSS 285
++L ++D T ++ T A+G+ YL K +H ++ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 286 NILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTS------------ 333
N+L+ + +I+D GLA+ ++ N Y + +GR
Sbjct: 187 NVLVTENNVMRIADFGLAR------------DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 334 IFNEKSDVYSFGILIMEIVS 353
++ +SDV+SFG+L+ EI +
Sbjct: 235 VYTHQSDVWSFGVLMWEIFT 254
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 88/193 (45%), Gaps = 21/193 (10%)
Query: 174 LLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEY 230
+L AVK++ NS S ++ F E V + + H N+VKLF + LV EY
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKLFEVIETEKTLYLVMEY 94
Query: 231 IDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNIL 288
G + +L HG + E + R K Q + Y H+ IVH ++K+ N+L
Sbjct: 95 ASGGEVFDYLVAHGRMKEK-----EARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 289 LDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--YLAEELSGRTSIFNEKSDVYSFGI 346
LD N KI+D G + E++ + Y A EL + DV+S G+
Sbjct: 146 LDADMNIKIADFGFSN----EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 347 LIMEIVSGRLPVD 359
++ +VSG LP D
Sbjct: 202 ILYTLVSGSLPFD 214
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLH-GPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 196
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 83
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 84 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 137
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLH-GPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 138 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 195
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 196 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 224
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 81 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 134
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLH-GPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLA--YNKFSI 192
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 193 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 221
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 114/265 (43%), Gaps = 30/265 (11%)
Query: 164 GDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQN 223
GD G ++ +L +K+L + E F E + ++ HK+LV +G C G
Sbjct: 33 GDYGQLHETEVL------LKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVCFCGDE 86
Query: 224 RILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMK 283
ILV E++ G+L +L + + W ++++ + A + +L E+ ++H N+
Sbjct: 87 NILVQEFVKFGSLDTYLKKN-KNCINILW--KLEVAKQLAWAMHFLEENT---LIHGNVC 140
Query: 284 SSNILLDHHWNPKISDVGLAKLHGPEWSIST---SCELRNSGYLAEELSGRTSIFNEKSD 340
+ NILL + K + KL P SI+ ++ E N +D
Sbjct: 141 AKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPWVPPECIENPKNLNLATD 200
Query: 341 VYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRI 400
+SFG + EI SG +P L ++ +Q+K+ + D P EL +
Sbjct: 201 KWSFGTTLWEICSGG-----DKP-------LSALDSQRKLQFYEDRHQLPAPKAAELANL 248
Query: 401 ILIALRCVDPDIKHRPKMGDVLRML 425
I C+D + HRP ++R L
Sbjct: 249 I---NNCMDYEPDHRPSFRAIIRDL 270
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 133
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLH-GPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 191
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLH-GPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLA--YNKFSI 193
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 222
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 42 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY 101
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 102 KELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 152
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P +T C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 153 KIADFGWS-VHAPSSRRTTLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 207
Query: 355 RLPVD 359
+ P +
Sbjct: 208 KPPFE 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQ------EVSAVVLLYMATQISSAMEYLEKKNFI 138
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 196
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 91/192 (47%), Gaps = 20/192 (10%)
Query: 175 LDNMRAAVKLLMSNSVSEEEDFIEKV----EAIGQVKHKNLVKLFGYCVEGQNRILVYEY 230
L + AVK+L + D + K+ + + +H +++KL+ + +V EY
Sbjct: 34 LTGHKVAVKILNRQKI-RSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEY 92
Query: 231 IDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNIL 288
+ G L ++ HG + E + ++ Q + Y H + +VH ++K N+L
Sbjct: 93 VSGGELFDYICKHGRVEEMEA------RRLFQQILSAVDYCHRHM---VVHRDLKPENVL 143
Query: 289 LDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE-LSGRTSIFNEKSDVYSFGIL 347
LD H N KI+D GL+ + + SC N Y A E +SGR E D++S G++
Sbjct: 144 LDAHMNAKIADFGLSNMMSDGEFLRDSCGSPN--YAAPEVISGRLYAGPE-VDIWSCGVI 200
Query: 348 IMEIVSGRLPVD 359
+ ++ G LP D
Sbjct: 201 LYALLCGTLPFD 212
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 133
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLH-GPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 191
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 196
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 197 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQ------EVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 191
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/226 (25%), Positives = 104/226 (46%), Gaps = 36/226 (15%)
Query: 155 FAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
F E V+ G G V +A LD+ A+K + ++ + + +V + + H+ +V+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 214 LFGYCVEGQNRI-------------LVYEYIDNGNLQQWLHG-SLGEAKPLTWDTRMKII 259
+ +E +N + + EY +NG L +H +L + + W ++
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYW----RLF 122
Query: 260 QGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHG----------- 307
+ + L+Y+H I+H ++K NI +D N KI D GLAK +H
Sbjct: 123 RQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 308 -PEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIV 352
P S + + + + Y+A E+ T +NEK D+YS GI+ E++
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQ------EVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKL-HGPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 191
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 106/212 (50%), Gaps = 22/212 (10%)
Query: 159 NVIASGDNGVVYRAVLLD-----NMRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLV 212
V+ SG G VY+ + + + A+K+L + + +F+++ + + H +LV
Sbjct: 44 KVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLV 103
Query: 213 KLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
+L G C+ + LV + + +G L +++H ++G L W ++ AKG+ YL
Sbjct: 104 RLLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYL 156
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
E ++VH ++ + N+L+ + KI+D GLA+ L G E + ++A E
Sbjct: 157 EER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
F +SDV+S+G+ I E+++ G P D
Sbjct: 214 IHYRK-FTHQSDVWSYGVTIWELMTFGGKPYD 244
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLH-GPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 193
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 222
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 80 REPPFYIIIEFMTYGNLLDYLRECNRQ------EVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLH-GPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 191
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 79
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 80 REPPFYIITEFMTYGNLLDYLRECNRQ------EVSAVVLLYMATQISSAMEYLEKKNFI 133
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLH-GPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 134 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 191
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 192 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 220
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 180 AAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
AVK+L ++ ++ D + ++E + + KHKN++ L G C + ++ EY GNL+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 238 QWLHGSLGEAKPLTWD---------TRMKIIQGT---AKGLAYLHEDIEPKIVHHNMKSS 285
++L ++D T ++ T A+G+ YL K +H ++ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 286 NILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLA-EELSGRTSIFNEKSDVYS 343
N+L+ + KI+D GLA+ ++ + T+ ++A E L R ++ +SDV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDR--VYTHQSDVWS 244
Query: 344 FGILIMEIVS 353
FG+L+ EI +
Sbjct: 245 FGVLMWEIFT 254
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 81
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 82 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 135
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLH-GPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 136 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 193
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 194 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 222
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 96/190 (50%), Gaps = 21/190 (11%)
Query: 180 AAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
AVK+L ++ ++ D + ++E + + KHKN++ L G C + ++ EY GNL+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLR 129
Query: 238 QWLHGSLGEAKPLTWD---------TRMKIIQGT---AKGLAYLHEDIEPKIVHHNMKSS 285
++L ++D T ++ T A+G+ YL K +H ++ +
Sbjct: 130 EYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 286 NILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLA-EELSGRTSIFNEKSDVYS 343
N+L+ + KI+D GLA+ ++ + T+ ++A E L R ++ +SDV+S
Sbjct: 187 NVLVTENNVMKIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDR--VYTHQSDVWS 244
Query: 344 FGILIMEIVS 353
FG+L+ EI +
Sbjct: 245 FGVLMWEIFT 254
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 103/209 (49%), Gaps = 16/209 (7%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 34 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 92
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 93 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 146
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLH-GPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 147 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLA--YNKFSI 204
Query: 338 KSDVYSFGILIMEIVS-GRLP---VDYSQ 362
KSDV++FG+L+ EI + G P +D SQ
Sbjct: 205 KSDVWAFGVLLWEIATYGMSPYPGIDLSQ 233
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 106/211 (50%), Gaps = 22/211 (10%)
Query: 160 VIASGDNGVVYRAVLLD-----NMRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLVK 213
V+ SG G VY+ + + + A+K+L + + +F+++ + + H +LV+
Sbjct: 22 VLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHLVR 81
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
L G C+ + LV + + +G L +++H ++G L W ++ AKG+ YL
Sbjct: 82 LLGVCLSPTIQ-LVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQI------AKGMMYLE 134
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELS 329
E ++VH ++ + N+L+ + KI+D GLA+ L G E + ++A E
Sbjct: 135 ER---RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALECI 191
Query: 330 GRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
F +SDV+S+G+ I E+++ G P D
Sbjct: 192 HYRK-FTHQSDVWSYGVTIWELMTFGGKPYD 221
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 80/174 (45%), Gaps = 14/174 (8%)
Query: 188 NSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWL--HGSLG 245
NS S ++ F E V + + H N+VKLF + LV EY G + +L HG +
Sbjct: 53 NSSSLQKLFRE-VRIMKVLNHPNIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMK 111
Query: 246 EAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL 305
E + R K Q + Y H+ IVH ++K+ N+LLD N KI+D G +
Sbjct: 112 EK-----EARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNE 162
Query: 306 HGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
+ C + Y A EL + DV+S G+++ +VSG LP D
Sbjct: 163 FTFGNKLDEFCG--SPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 123 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 173
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P +T C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 174 KIADFGWS-VHAPSSRRTTLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 228
Query: 355 RLPVD 359
+ P +
Sbjct: 229 KPPFE 233
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 38/260 (14%)
Query: 159 NVIASGDNGVVYRAVLL---DNMRAAVKLLMSNSVSEEEDF---IEKVEAIGQVKHKNLV 212
V+ SG G V++ V + ++++ V + + S + F + + AIG + H ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 213 KLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
+L G C G + LV +Y+ G+L + G+LG L W ++ AKG+ YL
Sbjct: 97 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 149
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS-GYLAEEL 328
E +VH N+ + N+LL +++D G+A L P+ E + ++A E
Sbjct: 150 EEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE- 205
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD----------------YSQPQVFLIDWL 371
S + +SDV+S+G+ + E+++ G P +QPQ+ ID
Sbjct: 206 SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVY 265
Query: 372 KSMVAQQKIAYVLDPKLPEM 391
MV I + P E+
Sbjct: 266 MVMVKCWMIDENIRPTFKEL 285
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 63.2 bits (152), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 41/200 (20%)
Query: 180 AAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
AVK+L ++ ++ D + ++E + + KHKN++ L G C + ++ Y GNL+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVAYASKGNLR 129
Query: 238 QWLHGSLGEAKPLTWD---------TRMKIIQGT---AKGLAYLHEDIEPKIVHHNMKSS 285
++L ++D T ++ T A+G+ YL K +H ++ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 286 NILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTS------------ 333
N+L+ + KI+D GLA+ ++ N Y + +GR
Sbjct: 187 NVLVTENNVMKIADFGLAR------------DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 334 IFNEKSDVYSFGILIMEIVS 353
++ +SDV+SFG+L+ EI +
Sbjct: 235 VYTHQSDVWSFGVLMWEIFT 254
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 38/260 (14%)
Query: 159 NVIASGDNGVVYRAVLL---DNMRAAVKLLMSNSVSEEEDF---IEKVEAIGQVKHKNLV 212
V+ SG G V++ V + ++++ V + + S + F + + AIG + H ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 213 KLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
+L G C G + LV +Y+ G+L + G+LG L W ++ AKG+ YL
Sbjct: 79 RLLGLC-PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQI------AKGMYYL 131
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS-GYLAEEL 328
E +VH N+ + N+LL +++D G+A L P+ E + ++A E
Sbjct: 132 EEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALE- 187
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD----------------YSQPQVFLIDWL 371
S + +SDV+S+G+ + E+++ G P +QPQ+ ID
Sbjct: 188 SIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQPQICTIDVY 247
Query: 372 KSMVAQQKIAYVLDPKLPEM 391
MV I + P E+
Sbjct: 248 MVMVKCWMIDENIRPTFKEL 267
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/289 (22%), Positives = 131/289 (45%), Gaps = 39/289 (13%)
Query: 159 NVIASGDNGVVYRAVLLDNMR-AAVKLLMSNSVSEEEDFIEKV-----EAIGQVKHKNLV 212
++ G G+V + D R A+K + S+++ ++K+ + + Q++H+NLV
Sbjct: 31 GLVGEGSYGMVMKCRNKDTGRIVAIKKFLE---SDDDKMVKKIAMREIKLLKQLRHENLV 87
Query: 213 KLFGYCVEGQNRILVYEYIDN---GNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
L C + + LV+E++D+ +L+ + +G L + K + G+ +
Sbjct: 88 NLLEVCKKKKRWYLVFEFVDHTILDDLELFPNG-------LDYQVVQKYLFQIINGIGFC 140
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELS 329
H I+H ++K NIL+ K+ D G A+ + E+ Y A EL
Sbjct: 141 HSH---NIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDD-EVATRWYRAPELL 196
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVF-LIDWLKSMVAQQKIAYVLDP 386
+ + DV++ G L+ E+ G P D Q++ ++ L +++ + + + +P
Sbjct: 197 VGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNP 256
Query: 387 -----KLPEMPSRKELKR--------IILIALRCVDPDIKHRPKMGDVL 422
+LPE+ R+ L+R +I +A +C+ D RP ++L
Sbjct: 257 VFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELL 305
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 97/196 (49%), Gaps = 12/196 (6%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQ------EVSAVVLLYMATQISSAMEYLEKKNFI 131
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLH-GPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
H ++ + N L+ + K++D GL++L G ++ + E L+ + F+
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLA--YNKFSI 189
Query: 338 KSDVYSFGILIMEIVS 353
KSDV++FG+L+ EI +
Sbjct: 190 KSDVWAFGVLLWEIAT 205
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 84
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 85 REPPFYIITEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 138
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEK 338
H ++ + N L+ + K++D GL++L + + + + A E S + F+ K
Sbjct: 139 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIK 197
Query: 339 SDVYSFGILIMEIVS-GRLP---VDYSQ 362
SDV++FG+L+ EI + G P +D SQ
Sbjct: 198 SDVWAFGVLLWEIATYGMSPYPGIDLSQ 225
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 40 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 99
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 100 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 150
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P +T C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 151 KIADFGWS-VHAPSSRRTTLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 205
Query: 355 RLPVD 359
+ P +
Sbjct: 206 KPPFE 210
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 103/203 (50%), Gaps = 22/203 (10%)
Query: 161 IASGDNGVVYRAVLL---DNMRAAVKLLMSNS-VSEEEDFIEKVEAIGQVKHKNLVKLFG 216
+ G+ G V + V + A+K+L + ++ E+ + + + + Q+ + +V+L G
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 217 YCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK 276
C + + +LV E G L ++L +G+ + + +++ + G+ YL E
Sbjct: 404 VC-QAEALMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQVSMGMKYLEEK---N 456
Query: 277 IVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG------YLAEELSG 330
VH N+ + N+LL + KISD GL+K G + S T+ R++G Y E ++
Sbjct: 457 FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA---RSAGKWPLKWYAPECINF 513
Query: 331 RTSIFNEKSDVYSFGILIMEIVS 353
R F+ +SDV+S+G+ + E +S
Sbjct: 514 RK--FSSRSDVWSYGVTMWEALS 534
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 37 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 96
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 97 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 147
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P +T C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 148 KIADFGWS-VHAPSSRRTTLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 202
Query: 355 RLPVD 359
+ P +
Sbjct: 203 KPPFE 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 42 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 101
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 102 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 152
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P +T C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 153 KIADFGWS-VHAPSSRRTTLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 207
Query: 355 RLPVD 359
+ P +
Sbjct: 208 KPPFE 212
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 36 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 95
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 96 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 146
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P +T C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 147 KIADFGWS-VHAPSSRRTTLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 201
Query: 355 RLPVD 359
+ P +
Sbjct: 202 KPPFE 206
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 62.8 bits (151), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 54 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 113
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 114 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 164
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P +T C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 165 KIADFGWS-VHAPSSRRTTLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 219
Query: 355 RLPVD 359
+ P +
Sbjct: 220 KPPFE 224
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 103/208 (49%), Gaps = 14/208 (6%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 80
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 81 REPPFYIIIEFMTYGNLLDYLRECNRQ------EVNAVVLLYMATQISSAMEYLEKKNFI 134
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEK 338
H ++ + N L+ + K++D GL++L + + + + A E S + F+ K
Sbjct: 135 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIK 193
Query: 339 SDVYSFGILIMEIVS-GRLP---VDYSQ 362
SDV++FG+L+ EI + G P +D SQ
Sbjct: 194 SDVWAFGVLLWEIATYGMSPYPGIDLSQ 221
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 41 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 100
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 101 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 151
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P +T C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 152 KIADFGWS-VHAPSSRRTTLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 206
Query: 355 RLPVD 359
+ P +
Sbjct: 207 KPPFE 211
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 40 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 99
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 100 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 150
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P +T C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 151 KIADFGWS-VHAPSSRRTTLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 205
Query: 355 RLPVD 359
+ P +
Sbjct: 206 KPPFE 210
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 84/190 (44%), Gaps = 15/190 (7%)
Query: 174 LLDNMRAAVKLLMSNSV--SEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYI 231
+L A+K++ + + + +V + + H N+VKLF + L+ EY
Sbjct: 37 ILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVIETEKTLYLIMEYA 96
Query: 232 DNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
G + +L HG + E + R K Q + Y H+ +IVH ++K+ N+LL
Sbjct: 97 SGGEVFDYLVAHGRMKEK-----EARSKFRQ-IVSAVQYCHQK---RIVHRDLKAENLLL 147
Query: 290 DHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIM 349
D N KI+D G + + C Y A EL + DV+S G+++
Sbjct: 148 DADMNIKIADFGFSNEFTVGGKLDAFCG--APPYAAPELFQGKKYDGPEVDVWSLGVILY 205
Query: 350 EIVSGRLPVD 359
+VSG LP D
Sbjct: 206 TLVSGSLPFD 215
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 119/264 (45%), Gaps = 28/264 (10%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ EY+ G+L+
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKI 297
+L A+ + ++ KG+ YL + +H ++ + NIL+++ KI
Sbjct: 105 DYLQ---AHAERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENRVKI 158
Query: 298 SDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEIVSG 354
D GL K+ + E S Y E L+ S F+ SDV+SFG+++ E+ +
Sbjct: 159 GDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYELFT- 215
Query: 355 RLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILIALR 406
+ S P F+ M+ K ++ L E + + L R I +I
Sbjct: 216 YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTE 270
Query: 407 CVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 271 CWNNNVNQRPSFRDLALRVDQIRD 294
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 78 REPPFYIIIEFMTYGNLLDYLRECNRQ------EVSAVVLLYMATQISSAMEYLEKKNFI 131
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEK 338
H ++ + N L+ + K++D GL++L + + + + A E S + F+ K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIK 190
Query: 339 SDVYSFGILIMEIVS 353
SDV++FG+L+ EI +
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 92/200 (46%), Gaps = 41/200 (20%)
Query: 180 AAVKLLMSNSVSEE-EDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
AVK+L ++ ++ D + ++E + + KHKN++ L G C + ++ Y GNL+
Sbjct: 70 VAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLR 129
Query: 238 QWLHGSLGEAKPLTWD---------TRMKIIQGT---AKGLAYLHEDIEPKIVHHNMKSS 285
++L ++D T ++ T A+G+ YL K +H ++ +
Sbjct: 130 EYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQ---KCIHRDLAAR 186
Query: 286 NILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTS------------ 333
N+L+ + KI+D GLA+ ++ N Y + +GR
Sbjct: 187 NVLVTENNVMKIADFGLAR------------DINNIDYYKKTTNGRLPVKWMAPEALFDR 234
Query: 334 IFNEKSDVYSFGILIMEIVS 353
++ +SDV+SFG+L+ EI +
Sbjct: 235 VYTHQSDVWSFGVLMWEIFT 254
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 34 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 93
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 94 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 144
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P +T C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 145 KIADFGWS-VHAPSSRRTTLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 199
Query: 355 RLPVD 359
+ P +
Sbjct: 200 KPPFE 204
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 41 ALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 100
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL +
Sbjct: 101 RELQKLSRFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSNGEL 151
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P +T C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 152 KIADFGWS-VHAPSSRRTTLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 206
Query: 355 RLPVD 359
P +
Sbjct: 207 MPPFE 211
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 34/267 (12%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ EY+ G+L+
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTA---KGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
+L K +K++Q T+ KG+ YL + +H ++ + NIL+++
Sbjct: 102 DYLQ------KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 152
Query: 295 PKISDVGLAKLHGPE---WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GL K+ + + + E Y E L+ S F+ SDV+SFG+++ E+
Sbjct: 153 VKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYEL 210
Query: 352 VSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILI 403
+ + S P F+ M+ K ++ L E + + L R I +I
Sbjct: 211 FT-YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 264
Query: 404 ALRCVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 265 MTECWNNNVNQRPSFRDLALRVDQIRD 291
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/195 (25%), Positives = 97/195 (49%), Gaps = 10/195 (5%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY V ++ AVK L +++ E E+F+++ + ++KH NLV+L G C
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTM-EVEEFLKEAAVMKEIKHPNLVQLLGVCT 77
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK-IV 278
++ E++ GNL +L + + ++ A ++ E +E K +
Sbjct: 78 REPPFYIITEFMTYGNLLDYLRECNRQ------EVSAVVLLYMATQISSAMEYLEKKNFI 131
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEK 338
H ++ + N L+ + K++D GL++L + + + + A E S + F+ K
Sbjct: 132 HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPE-SLAYNKFSIK 190
Query: 339 SDVYSFGILIMEIVS 353
SDV++FG+L+ EI +
Sbjct: 191 SDVWAFGVLLWEIAT 205
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 38 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 97
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 98 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 148
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P T C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 149 KIADFGWS-VHAPSSRRDTLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 203
Query: 355 RLPVD 359
+ P +
Sbjct: 204 KPPFE 208
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 42 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 101
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 102 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 152
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYL-AEELSGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P +T C + YL E + GR +EK D++S G+L E + G
Sbjct: 153 KIADFGWS-VHAPSSRRTTLCGTLD--YLPPEXIEGRXH--DEKVDLWSLGVLCYEFLVG 207
Query: 355 RLPVD 359
+ P +
Sbjct: 208 KPPFE 212
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 34/267 (12%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ EY+ G+L+
Sbjct: 49 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 108
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTA---KGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
+L K +K++Q T+ KG+ YL + +H ++ + NIL+++
Sbjct: 109 DYLQ------KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 159
Query: 295 PKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GL K+ + E S Y E L+ S F+ SDV+SFG+++ E+
Sbjct: 160 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYEL 217
Query: 352 VSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILI 403
+ + S P F+ M+ K ++ L E + + L R I +I
Sbjct: 218 FT-YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 271
Query: 404 ALRCVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 272 MTECWNNNVNQRPSFRDLALRVDQIRD 298
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 34/267 (12%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ EY+ G+L+
Sbjct: 47 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 106
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTA---KGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
+L K +K++Q T+ KG+ YL + +H ++ + NIL+++
Sbjct: 107 DYLQ------KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 157
Query: 295 PKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GL K+ + E S Y E L+ S F+ SDV+SFG+++ E+
Sbjct: 158 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYEL 215
Query: 352 VSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILI 403
+ + S P F+ M+ K ++ L E + + L R I +I
Sbjct: 216 FT-YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 269
Query: 404 ALRCVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 270 MTECWNNNVNQRPSFRDLALRVDQIRD 296
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 34/267 (12%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ EY+ G+L+
Sbjct: 48 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 107
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTA---KGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
+L K +K++Q T+ KG+ YL + +H ++ + NIL+++
Sbjct: 108 DYLQ------KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 158
Query: 295 PKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GL K+ + E S Y E L+ S F+ SDV+SFG+++ E+
Sbjct: 159 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYEL 216
Query: 352 VSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILI 403
+ + S P F+ M+ K ++ L E + + L R I +I
Sbjct: 217 FT-YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 270
Query: 404 ALRCVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 271 MTECWNNNVNQRPSFRDLALRVDQIRD 297
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 61.6 bits (148), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 100/220 (45%), Gaps = 23/220 (10%)
Query: 142 RISLKEIDIV----TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFI 197
+ SL++ I+ T F ++I S NG Y +L V+L ++E
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKK-EIVVRLKQVEHTNDER--- 57
Query: 198 EKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK 257
+ V H +++++G + Q ++ +YI+ G L L S P+ +
Sbjct: 58 ---LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAE 114
Query: 258 IIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCE 317
+ L YLH I++ ++K NILLD + + KI+D G AK + P+ T
Sbjct: 115 V----CLALEYLHSK---DIIYRDLKPENILLDKNGHIKITDFGFAK-YVPD---VTYXL 163
Query: 318 LRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
Y+A E+ T +N+ D +SFGILI E+++G P
Sbjct: 164 CGTPDYIAPEVVS-TKPYNKSIDWWSFGILIYEMLAGYTP 202
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 34/267 (12%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ EY+ G+L+
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTA---KGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
+L K +K++Q T+ KG+ YL + +H ++ + NIL+++
Sbjct: 102 DYLQ------KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 152
Query: 295 PKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GL K+ + E S Y E L+ S F+ SDV+SFG+++ E+
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYEL 210
Query: 352 VSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILI 403
+ + S P F+ M+ K ++ L E + + L R I +I
Sbjct: 211 FT-YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 264
Query: 404 ALRCVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 265 MTECWNNNVNQRPSFRDLALRVDQIRD 291
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 34/267 (12%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ EY+ G+L+
Sbjct: 41 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 100
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTA---KGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
+L K +K++Q T+ KG+ YL + +H ++ + NIL+++
Sbjct: 101 DYLQ------KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 151
Query: 295 PKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GL K+ + E S Y E L+ S F+ SDV+SFG+++ E+
Sbjct: 152 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYEL 209
Query: 352 VSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILI 403
+ + S P F+ M+ K ++ L E + + L R I +I
Sbjct: 210 FT-YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 263
Query: 404 ALRCVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 264 MTECWNNNVNQRPSFRDLALRVDQIRD 290
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 34/267 (12%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ EY+ G+L+
Sbjct: 42 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 101
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTA---KGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
+L K +K++Q T+ KG+ YL + +H ++ + NIL+++
Sbjct: 102 DYLQ------KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 152
Query: 295 PKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GL K+ + E S Y E L+ S F+ SDV+SFG+++ E+
Sbjct: 153 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYEL 210
Query: 352 VSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILI 403
+ + S P F+ M+ K ++ L E + + L R I +I
Sbjct: 211 FT-YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 264
Query: 404 ALRCVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 265 MTECWNNNVNQRPSFRDLALRVDQIRD 291
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 34/267 (12%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ EY+ G+L+
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 104
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTA---KGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
+L K +K++Q T+ KG+ YL + +H ++ + NIL+++
Sbjct: 105 DYLQ------KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 155
Query: 295 PKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GL K+ + E S Y E L+ S F+ SDV+SFG+++ E+
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYEL 213
Query: 352 VSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILI 403
+ + S P F+ M+ K ++ L E + + L R I +I
Sbjct: 214 FT-YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 267
Query: 404 ALRCVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 268 MTECWNNNVNQRPSFRDLALRVDQIRD 294
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 34/267 (12%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ EY+ G+L+
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTA---KGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
+L K +K++Q T+ KG+ YL + +H ++ + NIL+++
Sbjct: 120 DYLQ------KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 170
Query: 295 PKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GL K+ + E S Y E L+ S F+ SDV+SFG+++ E+
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYEL 228
Query: 352 VSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILI 403
+ + S P F+ M+ K ++ L E + + L R I +I
Sbjct: 229 FT-YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 282
Query: 404 ALRCVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 283 MTECWNNNVNQRPSFRDLALRVDQIRD 309
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 34/267 (12%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ EY+ G+L+
Sbjct: 73 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 132
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTA---KGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
+L K +K++Q T+ KG+ YL + +H ++ + NIL+++
Sbjct: 133 DYLQ------KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 183
Query: 295 PKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GL K+ + E S Y E L+ S F+ SDV+SFG+++ E+
Sbjct: 184 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYEL 241
Query: 352 VSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILI 403
+ + S P F+ M+ K ++ L E + + L R I +I
Sbjct: 242 FT-YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 295
Query: 404 ALRCVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 296 MTECWNNNVNQRPSFRDLALRVDQIRD 322
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 86/193 (44%), Gaps = 21/193 (10%)
Query: 174 LLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEY 230
+L AVK++ NS S ++ F E V + H N+VKLF + LV EY
Sbjct: 36 ILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIXKVLNHPNIVKLFEVIETEKTLYLVXEY 94
Query: 231 IDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNIL 288
G + +L HG E + R K Q + Y H+ IVH ++K+ N+L
Sbjct: 95 ASGGEVFDYLVAHGRXKEK-----EARAKFRQ-IVSAVQYCHQKF---IVHRDLKAENLL 145
Query: 289 LDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--YLAEELSGRTSIFNEKSDVYSFGI 346
LD N KI+D G + E++ + Y A EL + DV+S G+
Sbjct: 146 LDADXNIKIADFGFSN----EFTFGNKLDAFCGAPPYAAPELFQGKKYDGPEVDVWSLGV 201
Query: 347 LIMEIVSGRLPVD 359
++ +VSG LP D
Sbjct: 202 ILYTLVSGSLPFD 214
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 34/267 (12%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ EY+ G+L+
Sbjct: 60 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 119
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTA---KGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
+L K +K++Q T+ KG+ YL + +H ++ + NIL+++
Sbjct: 120 DYLQ------KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 170
Query: 295 PKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GL K+ + E S Y E L+ S F+ SDV+SFG+++ E+
Sbjct: 171 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYEL 228
Query: 352 VSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILI 403
+ + S P F+ M+ K ++ L E + + L R I +I
Sbjct: 229 FT-YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 282
Query: 404 ALRCVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 283 MTECWNNNVNQRPSFRDLALRVDQIRD 309
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 34/267 (12%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ EY+ G+L+
Sbjct: 46 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 105
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTA---KGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
+L K +K++Q T+ KG+ YL + +H ++ + NIL+++
Sbjct: 106 DYLQ------KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 156
Query: 295 PKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GL K+ + E S Y E L+ S F+ SDV+SFG+++ E+
Sbjct: 157 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYEL 214
Query: 352 VSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILI 403
+ + S P F+ M+ K ++ L E + + L R I +I
Sbjct: 215 FT-YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 268
Query: 404 ALRCVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 269 MTECWNNNVNQRPSFRDLALRVDQIRD 295
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 34/267 (12%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ EY+ G+L+
Sbjct: 40 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLR 99
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTA---KGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
+L K +K++Q T+ KG+ YL + +H ++ + NIL+++
Sbjct: 100 DYLQ------KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 150
Query: 295 PKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GL K+ + E S Y E L+ S F+ SDV+SFG+++ E+
Sbjct: 151 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYEL 208
Query: 352 VSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILI 403
+ + S P F+ M+ K ++ L E + + L R I +I
Sbjct: 209 FT-YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 262
Query: 404 ALRCVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 263 MTECWNNNVNQRPSFRDLALRVDQIRD 289
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 37 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVY 96
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H K++H ++K N+LL
Sbjct: 97 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---KVIHRDIKPENLLLGSAGEL 147
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P + C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 148 KIADFGWS-VHAPSSRRAALCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 202
Query: 355 RLPVD 359
+ P +
Sbjct: 203 KPPFE 207
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 110/248 (44%), Gaps = 39/248 (15%)
Query: 155 FAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
F E V+ G G V +A LD+ A+K + ++ + + +V + + H+ +V+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKK-IRHTEEKLSTILSEVXLLASLNHQYVVR 66
Query: 214 LFGYCVEGQNRI-------------LVYEYIDNGNLQQWLHG-SLGEAKPLTWDTRMKII 259
+ +E +N + + EY +N L +H +L + + W +I+
Sbjct: 67 YYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL 126
Query: 260 QGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHG----------- 307
+ L+Y+H I+H N+K NI +D N KI D GLAK +H
Sbjct: 127 EA----LSYIHSQ---GIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 308 -PEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVF 366
P S + + + + Y+A E+ T +NEK D YS GI+ E + P +V
Sbjct: 180 LPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI---YPFSTGXERVN 236
Query: 367 LIDWLKSM 374
++ L+S+
Sbjct: 237 ILKKLRSV 244
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 41 ALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 100
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL +
Sbjct: 101 RELQKLSRFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSNGEL 151
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P T C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 152 KIADFGWS-VHAPSSRRDTLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 206
Query: 355 RLPVD 359
P +
Sbjct: 207 MPPFE 211
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 123/267 (46%), Gaps = 34/267 (12%)
Query: 180 AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L ++ DF ++E + ++H N+VK G C +N L+ E++ G+L+
Sbjct: 45 VAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLR 104
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTA---KGLAYLHEDIEPKIVHHNMKSSNILLDHHWN 294
++L K +K++Q T+ KG+ YL + +H ++ + NIL+++
Sbjct: 105 EYLQ------KHKERIDHIKLLQYTSQICKGMEYLGTK---RYIHRDLATRNILVENENR 155
Query: 295 PKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GL K+ + E S Y E L+ S F+ SDV+SFG+++ E+
Sbjct: 156 VKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESLT--ESKFSVASDVWSFGVVLYEL 213
Query: 352 VSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPE-MPSRKELKR-------IILI 403
+ + S P F+ M+ K ++ L E + + L R I +I
Sbjct: 214 FT-YIEKSKSPPAEFM-----RMIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMI 267
Query: 404 ALRCVDPDIKHRPKMGDV-LRMLEPRD 429
C + ++ RP D+ LR+ + RD
Sbjct: 268 MTECWNNNVNQRPSFRDLALRVDQIRD 294
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 107/223 (47%), Gaps = 22/223 (9%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY+A + ++ AA K++ + S E ED++ +++ + H N+VKL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
N ++ E+ G + + L +PLT + + T L YLH++ KI+H
Sbjct: 105 YENNLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-----YLAEEL----SG 330
++K+ NIL + K++D G++ + + + + R+S ++A E+ +
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKN------TRTIQRRDSFIGTPYWMAPEVVMCETS 212
Query: 331 RTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKS 373
+ ++ K+DV+S GI ++E+ P P L+ KS
Sbjct: 213 KDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS 255
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++D +L++++ S G PL +++QG L
Sbjct: 66 NIVKLLD-VIHTENKLYLVFEHVDQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG----L 119
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 175
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 231
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 232 -PGVTSMPDYK 241
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/265 (21%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
I G +G VY A+ + A++ + ++E I ++ + + K+ N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
G +V EY+ G+L + + + + + + + L +LH + +++H
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN---QVIH 139
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++KS NILL + K++D G PE S S + ++A E+ R + + K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKA-YGPKV 197
Query: 340 DVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKR 399
D++S GI+ +E++ G P P + + + PE+ + ++L
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENP-------------LRALYLIATNGTPELQNPEKLSA 244
Query: 400 IILIAL-RCVDPDIKHRPKMGDVLR 423
I L RC+D D++ R ++L+
Sbjct: 245 IFRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 94/186 (50%), Gaps = 15/186 (8%)
Query: 178 MRAAVKLLMSNS-VSEEEDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
++ AVK+L S + E+E + +++ + + +H+N+V L G C G +++ EY G+
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 236 LQQWLHGSL------GEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
L +L + +PL + A+G+A+L +H ++ + N+LL
Sbjct: 137 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 193
Query: 290 DHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGIL 347
+ KI D GLA+ ++ + + + L ++A E S ++ +SDV+S+GIL
Sbjct: 194 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPE-SIFDCVYTVQSDVWSYGIL 251
Query: 348 IMEIVS 353
+ EI S
Sbjct: 252 LWEIFS 257
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 94/186 (50%), Gaps = 15/186 (8%)
Query: 178 MRAAVKLLMSNS-VSEEEDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
++ AVK+L S + E+E + +++ + + +H+N+V L G C G +++ EY G+
Sbjct: 69 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 128
Query: 236 LQQWLHGSL------GEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
L +L + +PL + A+G+A+L +H ++ + N+LL
Sbjct: 129 LLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---NCIHRDVAARNVLL 185
Query: 290 DHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGIL 347
+ KI D GLA+ ++ + + + L ++A E S ++ +SDV+S+GIL
Sbjct: 186 TNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPE-SIFDCVYTVQSDVWSYGIL 243
Query: 348 IMEIVS 353
+ EI S
Sbjct: 244 LWEIFS 249
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 67 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 120
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G T E+ Y A
Sbjct: 121 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRAP 176
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 232
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 233 -PGVTSMPDYK 242
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRA--VLLDNMRAAVKL-LMSNSVSEEEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L + A K+ L + + I ++ + ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 116
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G T E+ Y A
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRAP 172
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 228
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 229 -PGVTSMPDYK 238
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRA--VLLDNMRAAVKL-LMSNSVSEEEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L + A K+ L + + I ++ + ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 115
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G T E+ Y A
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRAP 171
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 227
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 228 -PGVTSMPDYK 237
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 37 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 96
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 97 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 147
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P + C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 148 KIADFGWS-VHAPSSRRAALCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 202
Query: 355 RLPVD 359
+ P +
Sbjct: 203 KPPFE 207
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 161 IASGDNGVVY----RAVLLDN--MRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY + V+ D R A+K + + S+ E +F+ + + + ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ +++ E + G+L+ +L E + P + +++ A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAE 326
YL+ + K VH ++ + N ++ + KI D G+ + ++ ++ L +++
Sbjct: 153 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVS 353
E S + +F SDV+SFG+++ EI +
Sbjct: 210 E-SLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 40 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 99
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 100 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 150
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI++ G + +H P +T C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 151 KIANFGWS-VHAPSSRRTTLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 205
Query: 355 RLPVD 359
+ P +
Sbjct: 206 KPPFE 210
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 39 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 98
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 99 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 149
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI++ G + +H P +T C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 150 KIANFGWS-VHAPSSRRTTLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 204
Query: 355 RLPVD 359
+ P +
Sbjct: 205 KPPFE 209
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 59/266 (22%), Positives = 119/266 (44%), Gaps = 27/266 (10%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
I G +G VY A+ + A++ + ++E I ++ + + K+ N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
G +V EY+ G+L + + + + + + + L +LH + +++H
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN---QVIH 139
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY-LAEELSGRTSIFNEK 338
++KS NILL + K++D G PE S E+ + Y +A E+ R + + K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQ--SKRSEMVGTPYWMAPEVVTRKA-YGPK 196
Query: 339 SDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELK 398
D++S GI+ +E++ G P P + + + PE+ + ++L
Sbjct: 197 VDIWSLGIMAIEMIEGEPPYLNENP-------------LRALYLIATNGTPELQNPEKLS 243
Query: 399 RIILIAL-RCVDPDIKHRPKMGDVLR 423
I L RC+D D++ R ++L+
Sbjct: 244 AIFRDFLNRCLDMDVEKRGSAKELLQ 269
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 161 IASGDNGVVY----RAVLLDN--MRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY + V+ D R A+K + + S+ E +F+ + + + ++V+
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ +++ E + G+L+ +L E + P + +++ A G+A
Sbjct: 84 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 143
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAE 326
YL+ + K VH ++ + N ++ + KI D G+ + ++ ++ L +++
Sbjct: 144 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 200
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVS 353
E S + +F SDV+SFG+++ EI +
Sbjct: 201 E-SLKDGVFTTYSDVWSFGVVLWEIAT 226
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 150 IVTDGFAEQNVIASGDNG-VVYRAVLLDNMRAAVKLLMSNSV---SEEEDFIEKVEAIGQ 205
I +D + Q V+ G G V+ + AVK++ V +++E + +V+ + Q
Sbjct: 29 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 88
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
+ H N++KL+ + + LV E G L + K + +II+ G
Sbjct: 89 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGE----LFDEIISRKRFSEVDAARIIRQVLSG 144
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHH---WNPKISDVGLAKLHGPEWSISTSCELRNSG 322
+ Y+H++ KIVH ++K N+LL+ N +I D GL+ E S ++ +
Sbjct: 145 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAY 199
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
Y+A E+ T ++EK DV+S G+++ ++SG P +
Sbjct: 200 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFN 234
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 106/208 (50%), Gaps = 15/208 (7%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDF----IEKVEAIGQVKHKN 210
F + + +G VY+ L+ L + EE I ++ + ++KH+N
Sbjct: 7 FKQLEKLGNGTYATVYKG--LNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHEN 64
Query: 211 LVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRM-KIIQ-GTAKGLA 267
+V+L+ + +N++ LV+E++DN +L++++ P + + K Q +GLA
Sbjct: 65 IVRLYD-VIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLA 122
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+ HE+ KI+H ++K N+L++ K+ D GLA+ G + + S E+ Y A +
Sbjct: 123 FCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVN-TFSSEVVTLWYRAPD 178
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGR 355
+ + ++ D++S G ++ E+++G+
Sbjct: 179 VLMGSRTYSTSIDIWSCGCILAEMITGK 206
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 161 IASGDNGVVY----RAVLLDN--MRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY + V+ D R A+K + + S+ E +F+ + + + ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ +++ E + G+L+ +L E + P + +++ A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAE 326
YL+ + K VH ++ + N ++ + KI D G+ + ++ ++ L +++
Sbjct: 146 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVS 353
E S + +F SDV+SFG+++ EI +
Sbjct: 203 E-SLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 14/219 (6%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY+A + ++ AA K++ + S E ED++ +++ + H N+VKL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
N ++ E+ G + + L +PLT + + T L YLH++ KI+H
Sbjct: 105 YENNLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 280 HNMKSSNILLDHHWNPKISDVGLAK-----LHGPEWSISTSCELRNSGYLAEELSGRTSI 334
++K+ NIL + K++D G++ + + I T + + E R
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFIGTPYWMAPEVVMCETSKDRP-- 216
Query: 335 FNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKS 373
++ K+DV+S GI ++E+ P P L+ KS
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS 255
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 40 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 99
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 100 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 150
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P + C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 151 KIADFGWS-VHAPSSRRAALCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 205
Query: 355 RLPVD 359
+ P +
Sbjct: 206 KPPFE 210
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 115
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G T E+ Y A
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRAP 171
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 227
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 228 -PGVTSMPDYK 237
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 161 IASGDNGVVYRAVL-LDNMRAAVKLLMSNSVSE-EEDFIEKVEAIGQVKHKNLVKLFGYC 218
I G+ G V+ L DN AVK + + F+++ + Q H N+V+L G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+ Q +V E + G+ +L E L T ++++ A G+ YL +
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLR---TEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRN--SGYLAEEL--SGRTSI 334
H ++ + N L+ KISD G+++ + + S LR + A E GR
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEA-DGVXAASGGLRQVPVKWTAPEALNYGR--- 291
Query: 335 FNEKSDVYSFGILIMEIVS 353
++ +SDV+SFGIL+ E S
Sbjct: 292 YSSESDVWSFGILLWETFS 310
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 161 IASGDNGVVY----RAVLLDN--MRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY + V+ D R A+K + + S+ E +F+ + + + ++V+
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ +++ E + G+L+ +L E + P + +++ A G+A
Sbjct: 78 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 137
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG----- 322
YL+ + K VH ++ + N ++ + KI D G+ + I + R G
Sbjct: 138 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR------DIXETDXXRKGGKGLLP 188
Query: 323 --YLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
+++ E S + +F SDV+SFG+++ EI +
Sbjct: 189 VRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIAT 220
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 116
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G T E+ Y A
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRAP 172
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 228
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 229 -PGVTSMPDYK 238
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 115
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G T E+ Y A
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRAP 171
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 227
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 228 -PGVTSMPDYK 237
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 103/207 (49%), Gaps = 18/207 (8%)
Query: 161 IASGDNGVVY----RAVLLDN--MRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY + V+ D R A+K + + S+ E +F+ + + + ++V+
Sbjct: 33 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 92
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHG---SLGEAKPLTWDTRMKIIQGT---AKGLA 267
L G +GQ +++ E + G+L+ +L ++ L + K+IQ A G+A
Sbjct: 93 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 152
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAE 326
YL+ + K VH ++ + N ++ + KI D G+ + ++ ++ L +++
Sbjct: 153 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 209
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVS 353
E S + +F SDV+SFG+++ EI +
Sbjct: 210 E-SLKDGVFTTYSDVWSFGVVLWEIAT 235
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 161 IASGDNGVVY----RAVLLDN--MRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY + V+ D R A+K + + S+ E +F+ + + + ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ +++ E + G+L+ +L E + P + +++ A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAE 326
YL+ + K VH ++ + N ++ + KI D G+ + ++ ++ L +++
Sbjct: 140 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVS 353
E S + +F SDV+SFG+++ EI +
Sbjct: 197 E-SLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 161 IASGDNGVVY----RAVLLDN--MRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY + V+ D R A+K + + S+ E +F+ + + + ++V+
Sbjct: 55 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 114
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ +++ E + G+L+ +L E + P + +++ A G+A
Sbjct: 115 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 174
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAE 326
YL+ + K VH ++ + N ++ + KI D G+ + ++ ++ L +++
Sbjct: 175 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 231
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVS 353
E S + +F SDV+SFG+++ EI +
Sbjct: 232 E-SLKDGVFTTYSDVWSFGVVLWEIAT 257
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 37 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 96
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 97 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 147
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P + C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 148 KIADFGWS-VHAPSSRRTXLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 202
Query: 355 RLPVD 359
+ P +
Sbjct: 203 KPPFE 207
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/213 (23%), Positives = 101/213 (47%), Gaps = 30/213 (14%)
Query: 161 IASGDNGVVY----RAVLLDN--MRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY + V+ D R A+K + + S+ E +F+ + + + ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ +++ E + G+L+ +L E + P + +++ A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG----- 322
YL+ + K VH ++ + N ++ + KI D G+ + I + R G
Sbjct: 147 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTR------DIXETDXXRKGGKGLLP 197
Query: 323 --YLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
+++ E S + +F SDV+SFG+++ EI +
Sbjct: 198 VRWMSPE-SLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 161 IASGDNGVVY----RAVLLDN--MRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY + V+ D R A+K + + S+ E +F+ + + + ++V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ +++ E + G+L+ +L E + P + +++ A G+A
Sbjct: 87 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 146
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAE 326
YL+ + K VH ++ + N ++ + KI D G+ + ++ ++ L +++
Sbjct: 147 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 203
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVS 353
E S + +F SDV+SFG+++ EI +
Sbjct: 204 E-SLKDGVFTTYSDVWSFGVVLWEIAT 229
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ +L++++ S G PL +++QG L
Sbjct: 70 NIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG----L 123
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G T E+ Y A
Sbjct: 124 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRAP 179
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 180 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 235
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 236 -PGVTSMPDYK 245
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 102/207 (49%), Gaps = 18/207 (8%)
Query: 161 IASGDNGVVY----RAVLLDN--MRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY + V+ D R A+K + + S+ E +F+ + + + ++V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ +++ E + G+L+ +L E + P + +++ A G+A
Sbjct: 86 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 145
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAE 326
YL+ + K VH ++ + N ++ + KI D G+ + ++ ++ L +++
Sbjct: 146 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 202
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVS 353
E S + +F SDV+SFG+++ EI +
Sbjct: 203 E-SLKDGVFTTYSDVWSFGVVLWEIAT 228
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ +L++++ S G PL +++QG L
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG----L 116
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G T E+ Y A
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRAP 172
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 228
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 229 -PGVTSMPDYK 238
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 37 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 96
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 97 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 147
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P + C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 148 KIADFGWS-VHAPSSRRTELCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 202
Query: 355 RLPVD 359
+ P +
Sbjct: 203 KPPFE 207
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 91/199 (45%), Gaps = 16/199 (8%)
Query: 161 IASGDNGVVYRAVL-LDNMRAAVKLLMSNSVSE-EEDFIEKVEAIGQVKHKNLVKLFGYC 218
I G+ G V+ L DN AVK + + F+++ + Q H N+V+L G C
Sbjct: 122 IGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC 181
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+ Q +V E + G+ +L E L T ++++ A G+ YL +
Sbjct: 182 TQKQPIYIVMELVQGGDFLTFLR---TEGARLRVKTLLQMVGDAAAGMEYLESKC---CI 235
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRN--SGYLAEEL--SGRTSI 334
H ++ + N L+ KISD G+++ + + S LR + A E GR
Sbjct: 236 HRDLAARNCLVTEKNVLKISDFGMSREEA-DGVYAASGGLRQVPVKWTAPEALNYGR--- 291
Query: 335 FNEKSDVYSFGILIMEIVS 353
++ +SDV+SFGIL+ E S
Sbjct: 292 YSSESDVWSFGILLWETFS 310
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 38 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 97
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 98 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 148
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P + C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 149 KIADFGWS-VHAPSSRRTDLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 203
Query: 355 RLPVD 359
+ P +
Sbjct: 204 KPPFE 208
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 101/219 (46%), Gaps = 14/219 (6%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY+A + ++ AA K++ + S E ED++ +++ + H N+VKL
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAFY 104
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
N ++ E+ G + + L +PLT + + T L YLH++ KI+H
Sbjct: 105 YENNLWILIEFCAGGAVDAVM---LELERPLTESQIQVVCKQTLDALNYLHDN---KIIH 158
Query: 280 HNMKSSNILLDHHWNPKISDVGLAK-----LHGPEWSISTSCELRNSGYLAEELSGRTSI 334
++K+ NIL + K++D G++ + + I T + + E R
Sbjct: 159 RDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFIGTPYWMAPEVVMCETSKDRP-- 216
Query: 335 FNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKS 373
++ K+DV+S GI ++E+ P P L+ KS
Sbjct: 217 YDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS 255
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ +L++++ S G PL +++QG L
Sbjct: 64 NIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG----L 117
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G T E+ Y A
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRAP 173
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 229
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 230 -PGVTSMPDYK 239
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 36/226 (15%)
Query: 155 FAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
F E V+ G G V +A LD+ A+K + ++ + + +V + + H+ +V+
Sbjct: 8 FEEIAVLGQGAFGQVVKARNALDSRYYAIKKI-RHTEEKLSTILSEVMLLASLNHQYVVR 66
Query: 214 LFGYCVEGQNRI-------------LVYEYIDNGNLQQWLHG-SLGEAKPLTWDTRMKII 259
+ +E +N + + EY +N L +H +L + + W ++
Sbjct: 67 YYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYW----RLF 122
Query: 260 QGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHG----------- 307
+ + L+Y+H I+H ++K NI +D N KI D GLAK +H
Sbjct: 123 RQILEALSYIHSQ---GIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQN 179
Query: 308 -PEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIV 352
P S + + + + Y+A E+ T +NEK D+YS GI+ E++
Sbjct: 180 LPGSSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 116
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G T E+ Y A
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRAP 172
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 173 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 228
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 229 -PGVTSMPDYK 238
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 103/207 (49%), Gaps = 18/207 (8%)
Query: 161 IASGDNGVVY----RAVLLDN--MRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY + V+ D R A+K + + S+ E +F+ + + + ++V+
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHG---SLGEAKPLTWDTRMKIIQGT---AKGLA 267
L G +GQ +++ E + G+L+ +L ++ L + K+IQ A G+A
Sbjct: 83 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGMA 142
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAE 326
YL+ + K VH ++ + N ++ + KI D G+ + ++ ++ L +++
Sbjct: 143 YLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 199
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVS 353
E S + +F SDV+SFG+++ EI +
Sbjct: 200 E-SLKDGVFTTYSDVWSFGVVLWEIAT 225
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 42 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 101
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 102 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 152
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P + C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 153 KIADFGWS-VHAPSSRRTDLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 207
Query: 355 RLPVD 359
+ P +
Sbjct: 208 KPPFE 212
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 10 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 69
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ +L++++ S G PL +++QG L
Sbjct: 70 NIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG----L 123
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G T E+ Y A
Sbjct: 124 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRAP 179
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 180 EILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 235
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 236 -PGVTSMPDYK 245
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 37 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 96
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 97 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 147
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P + C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 148 KIADFGWS-VHAPSSRRTDLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 202
Query: 355 RLPVD 359
+ P +
Sbjct: 203 KPPFE 207
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 88/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 37 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 96
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 97 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 147
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P + C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 148 KIADFGWS-VHAPSSRRTDLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 202
Query: 355 RLPVD 359
+ P +
Sbjct: 203 KPPFE 207
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 174 LLDNMRA--AVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFG--YCVEGQNRILVYE 229
L DN A AVK L + ++ DF +++ + + +VK G Y Q+ LV E
Sbjct: 35 LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 94
Query: 230 YIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSN 286
Y+ +G L+ +L L ++ L + +++ KG+ YL + VH ++ + N
Sbjct: 95 YLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYLGSR---RCVHRDLAARN 145
Query: 287 ILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYS 343
IL++ + KI+D GLAKL + E S Y E LS +IF+ +SDV+S
Sbjct: 146 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS--DNIFSRQSDVWS 203
Query: 344 FGILIMEIVS 353
FG+++ E+ +
Sbjct: 204 FGVVLYELFT 213
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 174 LLDNMRA--AVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFG--YCVEGQNRILVYE 229
L DN A AVK L + ++ DF +++ + + +VK G Y Q+ LV E
Sbjct: 34 LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 93
Query: 230 YIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSN 286
Y+ +G L+ +L L ++ L + +++ KG+ YL + VH ++ + N
Sbjct: 94 YLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYLGSR---RCVHRDLAARN 144
Query: 287 ILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYS 343
IL++ + KI+D GLAKL + E S Y E LS +IF+ +SDV+S
Sbjct: 145 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS--DNIFSRQSDVWS 202
Query: 344 FGILIMEIVS 353
FG+++ E+ +
Sbjct: 203 FGVVLYELFT 212
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
I G +G VY A+ + A++ + ++E I ++ + + K+ N+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
G +V EY+ G+L + + + + + + + L +LH + +++H
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN---QVIH 140
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
N+KS NILL + K++D G PE S S + ++A E+ R + + K
Sbjct: 141 RNIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSTMVGTPYWMAPEVVTRKA-YGPKV 198
Query: 340 DVYSFGILIMEIVSGRLP 357
D++S GI+ +E++ G P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 63 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 122
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 123 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 173
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 174 KIADFGWS-VHAPSSRRDDLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 228
Query: 355 RLPVD 359
+ P +
Sbjct: 229 KPPFE 233
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 39 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 98
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 99 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 149
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 150 KIADFGWS-VHAPSSRRXXLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 204
Query: 355 RLPVD 359
+ P +
Sbjct: 205 KPPFE 209
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 174 LLDNMRA--AVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFG--YCVEGQNRILVYE 229
L DN A AVK L + ++ DF +++ + + +VK G Y Q+ LV E
Sbjct: 47 LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYGPGRQSLRLVME 106
Query: 230 YIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSN 286
Y+ +G L+ +L L ++ L + +++ KG+ YL + VH ++ + N
Sbjct: 107 YLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYLGSR---RCVHRDLAARN 157
Query: 287 ILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYS 343
IL++ + KI+D GLAKL + E S Y E LS +IF+ +SDV+S
Sbjct: 158 ILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESLS--DNIFSRQSDVWS 215
Query: 344 FGILIMEIVS 353
FG+++ E+ +
Sbjct: 216 FGVVLYELFT 225
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/230 (27%), Positives = 105/230 (45%), Gaps = 21/230 (9%)
Query: 135 SGMRLGIRISLKEIDIVTDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEE 193
SG+ LG + + +DG+ + I G R V NM AVK++ +
Sbjct: 9 SGVDLGTENLYFQSMVFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPS 68
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL-QQWLHGSLGEAKPLTW 252
E+ IE + GQ H N++ L +G++ LV E + G L + L + ++
Sbjct: 69 EE-IEILLRYGQ--HPNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF 125
Query: 253 DTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNIL-LDHHWNP---KISDVGLAK-LHG 307
++ K + YLH +VH ++K SNIL +D NP +I D G AK L
Sbjct: 126 -----VLHTIGKTVEYLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRA 177
Query: 308 PEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ T C N ++A E+ R ++E D++S GIL+ +++G P
Sbjct: 178 ENGLLMTPCYTAN--FVAPEVLKRQG-YDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L+ ++ S G PL +++QG L
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQG----L 115
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G T E+ Y A
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRAP 171
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 227
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 228 -PGVTSMPDYK 237
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 37 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 96
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 97 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 147
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 148 KIADFGWS-VHAPSSRRXXLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 202
Query: 355 RLPVD 359
+ P +
Sbjct: 203 KPPFE 207
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 18/220 (8%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMR---AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKN 210
F + I G G V++ + DN A+K++ + + E ED +++ + Q
Sbjct: 9 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
+ K +G ++ ++ EY+ G+ L E PL I++ KGL YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLH 121
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSG 330
+ K +H ++K++N+LL H K++D G+A + I + + ++A E+
Sbjct: 122 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKRNTFVGTPFWMAPEVI- 176
Query: 331 RTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQ--VFLI 368
+ S ++ K+D++S GI +E+ G P P +FLI
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 103/216 (47%), Gaps = 23/216 (10%)
Query: 161 IASGDNGVVYRAVLLDNMR-AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
+ G G VY+A+ + + A+K + S + ++ I+++ + Q ++VK +G
Sbjct: 37 LGEGSYGSVYKAIHKETGQIVAIKQVPVES--DLQEIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
+ + +V EY G++ + K LT D I+Q T KGL YLH + +H
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRL---RNKTLTEDEIATILQSTLKGLEYLH---FMRKIH 148
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS-----GYLAEELSGRTSI 334
++K+ NILL+ + K++D G+A ++ RN ++A E+
Sbjct: 149 RDIKAGNILLNTEGHAKLADFGVAG------QLTDXMAKRNXVIGTPFWMAPEVIQEIG- 201
Query: 335 FNEKSDVYSFGILIMEIVSGRLPVDYSQPQ--VFLI 368
+N +D++S GI +E+ G+ P P +F+I
Sbjct: 202 YNCVADIWSLGITAIEMAEGKPPYADIHPMRAIFMI 237
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 21/193 (10%)
Query: 178 MRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
++ AVK L ++E DF+ + I ++ H+N+V+ G ++ R ++ E + G+L
Sbjct: 62 LQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDL 121
Query: 237 QQWLHGSLGEAKP-------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +L E +P L + + + A G YL E+ +H ++ + N LL
Sbjct: 122 KSFLR----ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 174
Query: 290 DHHWN---PKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFG 345
KI D G+A+ ++ + C + ++ E + IF K+D +SFG
Sbjct: 175 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFG 233
Query: 346 ILIMEIVS-GRLP 357
+L+ EI S G +P
Sbjct: 234 VLLWEIFSLGYMP 246
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 116
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
++ H +++H ++K N+L++ K++D GLA+ G T E+ Y A
Sbjct: 117 SFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTH-EVVTLWYRAP 172
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 228
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 229 -PGVTSMPDYK 238
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 18/220 (8%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMR---AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKN 210
F + I G G V++ + DN A+K++ + + E ED +++ + Q
Sbjct: 24 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 81
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
+ K +G ++ ++ EY+ G+ L E PL I++ KGL YLH
Sbjct: 82 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLH 136
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSG 330
+ K +H ++K++N+LL H K++D G+A + I + + ++A E+
Sbjct: 137 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKRNXFVGTPFWMAPEVI- 191
Query: 331 RTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQ--VFLI 368
+ S ++ K+D++S GI +E+ G P P +FLI
Sbjct: 192 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 231
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 40 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 99
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 100 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 150
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 151 KIADFGWS-VHAPSSRRXXLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 205
Query: 355 RLPVD 359
+ P +
Sbjct: 206 KPPFE 210
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 103/203 (50%), Gaps = 22/203 (10%)
Query: 161 IASGDNGVVYRAVLL---DNMRAAVKLLMSNS-VSEEEDFIEKVEAIGQVKHKNLVKLFG 216
+ G+ G V + V + A+K+L + ++ E+ + + + + Q+ + +V+L G
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 217 YCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK 276
C + + +LV E G L ++L +G+ + + +++ + G+ YL E
Sbjct: 78 VC-QAEALMLVMEMAGGGPLHKFL---VGKREEIPVSNVAELLHQVSMGMKYLEEK---N 130
Query: 277 IVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG------YLAEELSG 330
VH ++ + N+LL + KISD GL+K G + S T+ R++G Y E ++
Sbjct: 131 FVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTA---RSAGKWPLKWYAPECINF 187
Query: 331 RTSIFNEKSDVYSFGILIMEIVS 353
R F+ +SDV+S+G+ + E +S
Sbjct: 188 RK--FSSRSDVWSYGVTMWEALS 208
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 91/193 (47%), Gaps = 21/193 (10%)
Query: 178 MRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
++ AVK L ++E DF+ + I ++ H+N+V+ G ++ R ++ E + G+L
Sbjct: 76 LQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDL 135
Query: 237 QQWLHGSLGEAKP-------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +L E +P L + + + A G YL E+ +H ++ + N LL
Sbjct: 136 KSFLR----ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 188
Query: 290 DHHWN---PKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFG 345
KI D G+A+ ++ + C + ++ E + IF K+D +SFG
Sbjct: 189 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFG 247
Query: 346 ILIMEIVS-GRLP 357
+L+ EI S G +P
Sbjct: 248 VLLWEIFSLGYMP 260
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 40 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 99
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 100 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 150
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + +H P C + YL E+ GR + +EK D++S G+L E + G
Sbjct: 151 KIADFGWS-VHAPSSRRDDLCGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 205
Query: 355 RLPVD 359
+ P +
Sbjct: 206 KPPFE 210
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 101/207 (48%), Gaps = 18/207 (8%)
Query: 161 IASGDNGVVY----RAVLLDN--MRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ G G+VY + V+ D R A+K + + S+ E +F+ + + + ++V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK------PLTWDTRMKIIQGTAKGLA 267
L G +GQ +++ E + G+L+ +L E + P + +++ A G+A
Sbjct: 80 LLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGMA 139
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAE 326
YL+ + K VH ++ + N + + KI D G+ + ++ ++ L +++
Sbjct: 140 YLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSP 196
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVS 353
E S + +F SDV+SFG+++ EI +
Sbjct: 197 E-SLKDGVFTTYSDVWSFGVVLWEIAT 222
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 150 IVTDGFAEQNVIASGDNG-VVYRAVLLDNMRAAVKLLMSNSV---SEEEDFIEKVEAIGQ 205
I +D + Q V+ G G V+ + AVK++ V +++E + +V+ + Q
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 82
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
+ H N++KL+ + + LV E G L + K + +II+ G
Sbjct: 83 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGE----LFDEIISRKRFSEVDAARIIRQVLSG 138
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHH---WNPKISDVGLAKLHGPEWSISTSCELRNSG 322
+ Y+H++ KIVH ++K N+LL+ N +I D GL+ E S ++ +
Sbjct: 139 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAY 193
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
Y+A E+ T ++EK DV+S G+++ ++SG P +
Sbjct: 194 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
++H +++KL+ I+V EY N L + + ++ + Q
Sbjct: 61 LRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISA 115
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
+ Y H KIVH ++K N+LLD H N KI+D GL+ + + TSC N Y A
Sbjct: 116 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN--YAA 170
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLPV-DYSQPQVF 366
E+ + DV+S G+++ ++ RLP D S P +F
Sbjct: 171 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF 212
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 18/220 (8%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMR---AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKN 210
F + I G G V++ + DN A+K++ + + E ED +++ + Q
Sbjct: 9 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 66
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
+ K +G ++ ++ EY+ G+ L E PL I++ KGL YLH
Sbjct: 67 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLH 121
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSG 330
+ K +H ++K++N+LL H K++D G+A + I + + ++A E+
Sbjct: 122 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKRNXFVGTPFWMAPEVI- 176
Query: 331 RTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQ--VFLI 368
+ S ++ K+D++S GI +E+ G P P +FLI
Sbjct: 177 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 216
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 18/220 (8%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMR---AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKN 210
F + I G G V++ + DN A+K++ + + E ED +++ + Q
Sbjct: 29 FTKLEKIGKGSFGEVFKGI--DNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 86
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
+ K +G ++ ++ EY+ G+ L E PL I++ KGL YLH
Sbjct: 87 VTKYYGSYLKDTKLWIIMEYLGGGSALDLL-----EPGPLDETQIATILREILKGLDYLH 141
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSG 330
+ K +H ++K++N+LL H K++D G+A + I + + ++A E+
Sbjct: 142 SE---KKIHRDIKAANVLLSEHGEVKLADFGVAG-QLTDTQIKRNTFVGTPFWMAPEVI- 196
Query: 331 RTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQ--VFLI 368
+ S ++ K+D++S GI +E+ G P P +FLI
Sbjct: 197 KQSAYDSKADIWSLGITAIELARGEPPHSELHPMKVLFLI 236
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDF----IEKVEAIGQVKHKNLVKLFG 216
I G GVVY+A +N L E+E I ++ + ++KH N+VKL+
Sbjct: 10 IGEGTYGVVYKAQ--NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 217 YCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK 276
+ +LV+E++D +L++ L G + +T + + G+AY H+ +
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKS---FLLQLLNGIAYCHDR---R 120
Query: 277 IVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFN 336
++H ++K N+L++ KI+D GLA+ G T E+ Y A ++ + ++
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH-EIVTLWYRAPDVLMGSKKYS 179
Query: 337 EKSDVYSFGILIMEIVSG 354
D++S G + E+V+G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 178 MRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
++ AVK L ++E DF+ + I + H+N+V+ G ++ R ++ E + G+L
Sbjct: 68 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 127
Query: 237 QQWLHGSLGEAKP-------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +L E +P L + + + A G YL E+ +H ++ + N LL
Sbjct: 128 KSFLR----ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 180
Query: 290 DHHWN---PKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFG 345
KI D G+A+ ++ + C + ++ E + IF K+D +SFG
Sbjct: 181 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFG 239
Query: 346 ILIMEIVS-GRLP 357
+L+ EI S G +P
Sbjct: 240 VLLWEIFSLGYMP 252
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 178 MRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
++ AVK L ++E DF+ + I + H+N+V+ G ++ R ++ E + G+L
Sbjct: 61 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDL 120
Query: 237 QQWLHGSLGEAKP-------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +L E +P L + + + A G YL E+ +H ++ + N LL
Sbjct: 121 KSFLR----ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 173
Query: 290 DHHWN---PKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFG 345
KI D G+A+ ++ + C + ++ E + IF K+D +SFG
Sbjct: 174 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFG 232
Query: 346 ILIMEIVS-GRLP 357
+L+ EI S G +P
Sbjct: 233 VLLWEIFSLGYMP 245
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 178 MRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
++ AVK L ++E DF+ + I + H+N+V+ G ++ R ++ E + G+L
Sbjct: 78 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 137
Query: 237 QQWLHGSLGEAKP-------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +L E +P L + + + A G YL E+ +H ++ + N LL
Sbjct: 138 KSFLR----ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 190
Query: 290 DHHWN---PKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFG 345
KI D G+A+ ++ + C + ++ E + IF K+D +SFG
Sbjct: 191 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFG 249
Query: 346 ILIMEIVS-GRLP 357
+L+ EI S G +P
Sbjct: 250 VLLWEIFSLGYMP 262
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
++H +++KL+ I+V EY N L + + ++ + Q
Sbjct: 71 LRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISA 125
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
+ Y H KIVH ++K N+LLD H N KI+D GL+ + + TSC N Y A
Sbjct: 126 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN--YAA 180
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLPV-DYSQPQVF 366
E+ + DV+S G+++ ++ RLP D S P +F
Sbjct: 181 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF 222
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 178 MRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
++ AVK L ++E DF+ + I + H+N+V+ G ++ R ++ E + G+L
Sbjct: 62 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 121
Query: 237 QQWLHGSLGEAKP-------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +L E +P L + + + A G YL E+ +H ++ + N LL
Sbjct: 122 KSFLR----ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 174
Query: 290 DHHWN---PKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFG 345
KI D G+A+ ++ + C + ++ E + IF K+D +SFG
Sbjct: 175 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFG 233
Query: 346 ILIMEIVS-GRLP 357
+L+ EI S G +P
Sbjct: 234 VLLWEIFSLGYMP 246
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 178 MRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
++ AVK L ++E DF+ + I + H+N+V+ G ++ R ++ E + G+L
Sbjct: 61 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 120
Query: 237 QQWLHGSLGEAKP-------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +L E +P L + + + A G YL E+ +H ++ + N LL
Sbjct: 121 KSFLR----ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 173
Query: 290 DHHWN---PKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFG 345
KI D G+A+ ++ + C + ++ E + IF K+D +SFG
Sbjct: 174 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFG 232
Query: 346 ILIMEIVS-GRLP 357
+L+ EI S G +P
Sbjct: 233 VLLWEIFSLGYMP 245
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 178 MRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
++ AVK L ++E DF+ + I + H+N+V+ G ++ R ++ E + G+L
Sbjct: 53 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 112
Query: 237 QQWLHGSLGEAKP-------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +L E +P L + + + A G YL E+ +H ++ + N LL
Sbjct: 113 KSFLR----ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 165
Query: 290 DHHWN---PKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFG 345
KI D G+A+ ++ + C + ++ E + IF K+D +SFG
Sbjct: 166 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFG 224
Query: 346 ILIMEIVS-GRLP 357
+L+ EI S G +P
Sbjct: 225 VLLWEIFSLGYMP 237
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 178 MRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
++ AVK L ++E DF+ + I + H+N+V+ G ++ R ++ E + G+L
Sbjct: 88 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 147
Query: 237 QQWLHGSLGEAKP-------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +L E +P L + + + A G YL E+ +H ++ + N LL
Sbjct: 148 KSFLR----ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 200
Query: 290 DHHWN---PKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFG 345
KI D G+A+ ++ + C + ++ E + IF K+D +SFG
Sbjct: 201 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFG 259
Query: 346 ILIMEIVS-GRLP 357
+L+ EI S G +P
Sbjct: 260 VLLWEIFSLGYMP 272
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 85/190 (44%), Gaps = 30/190 (15%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 42 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVY 101
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 102 KELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 152
Query: 296 KISDVGLAKLHGPEWSISTSCELRNS-----GYLAEEL-SGRTSIFNEKSDVYSFGILIM 349
KI+D G WS+ R YL E+ GR + +EK D++S G+L
Sbjct: 153 KIADFG--------WSVHAPSSRRXXLXGTLDYLPPEMIEGR--MHDEKVDLWSLGVLCY 202
Query: 350 EIVSGRLPVD 359
E + G+ P +
Sbjct: 203 EFLVGKPPFE 212
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
++H +++KL+ I+V EY N L + + ++ + Q
Sbjct: 70 LRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISA 124
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
+ Y H KIVH ++K N+LLD H N KI+D GL+ + + TSC N Y A
Sbjct: 125 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN--YAA 179
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLPV-DYSQPQVF 366
E+ + DV+S G+++ ++ RLP D S P +F
Sbjct: 180 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF 221
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 75/162 (46%), Gaps = 11/162 (6%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
++H +++KL+ I+V EY N L + + ++ + Q
Sbjct: 65 LRHPHIIKLYDVIKSKDEIIMVIEYAGNE-----LFDYIVQRDKMSEQEARRFFQQIISA 119
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
+ Y H KIVH ++K N+LLD H N KI+D GL+ + + TSC N Y A
Sbjct: 120 VEYCHRH---KIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN--YAA 174
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLPV-DYSQPQVF 366
E+ + DV+S G+++ ++ RLP D S P +F
Sbjct: 175 PEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLF 216
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 178 MRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
++ AVK L ++E DF+ + I + H+N+V+ G ++ R ++ E + G+L
Sbjct: 76 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDL 135
Query: 237 QQWLHGSLGEAKP-------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +L E +P L + + + A G YL E+ +H ++ + N LL
Sbjct: 136 KSFLR----ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 188
Query: 290 DHHWN---PKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFG 345
KI D G+A+ ++ + C + ++ E + IF K+D +SFG
Sbjct: 189 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFG 247
Query: 346 ILIMEIVS-GRLP 357
+L+ EI S G +P
Sbjct: 248 VLLWEIFSLGYMP 260
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 115
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 171
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 227
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 228 -PGVTSMPDYK 237
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 2 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 61
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 62 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 115
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 116 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 171
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 172 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 227
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 228 -PGVTSMPDYK 237
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDF----IEKVEAIGQVKHKNLVKLFG 216
I G GVVY+A +N L E+E I ++ + ++KH N+VKL+
Sbjct: 10 IGEGTYGVVYKAQ--NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 217 YCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK 276
+ +LV+E++D +L++ L G + +T + + G+AY H+ +
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKS---FLLQLLNGIAYCHDR---R 120
Query: 277 IVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFN 336
++H ++K N+L++ KI+D GLA+ G T E+ Y A ++ + ++
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH-EVVTLWYRAPDVLMGSKKYS 179
Query: 337 EKSDVYSFGILIMEIVSG 354
D++S G + E+V+G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ +L++++ S G PL +++QG L
Sbjct: 65 NIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG----L 118
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 174
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 230
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 231 -PGVTSMPDYK 240
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 116
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 172
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 228
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 229 -PGVTSMPDYK 238
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 150 IVTDGFAEQNVIASGDNG-VVYRAVLLDNMRAAVKLLMSNSV---SEEEDFIEKVEAIGQ 205
I +D + Q V+ G G V+ + AVK++ V +++E + +V+ + Q
Sbjct: 46 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 105
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
+ H N++KL+ + + LV E G L + K + +II+ G
Sbjct: 106 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGE----LFDEIISRKRFSEVDAARIIRQVLSG 161
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHH---WNPKISDVGLAKLHGPEWSISTSCELRNSG 322
+ Y+H++ KIVH ++K N+LL+ N +I D GL+ E S ++ +
Sbjct: 162 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAY 216
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
Y+A E+ T ++EK DV+S G+++ ++SG P +
Sbjct: 217 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFN 251
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ +L++++ S G PL +++QG L
Sbjct: 66 NIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG----L 119
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 175
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 231
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 232 -PGVTSMPDYK 241
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ +L++++ S G PL +++QG L
Sbjct: 65 NIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG----L 118
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 174
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 230
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 231 -PGVTSMPDYK 240
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 116
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 172
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 228
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 229 -PGVTSMPDYK 238
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDF----IEKVEAIGQVKHKNLVKLFG 216
I G GVVY+A +N L E+E I ++ + ++KH N+VKL+
Sbjct: 10 IGEGTYGVVYKAQ--NNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYD 67
Query: 217 YCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK 276
+ +LV+E++D +L++ L G + +T + + G+AY H+ +
Sbjct: 68 VIHTKKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKS---FLLQLLNGIAYCHDR---R 120
Query: 277 IVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFN 336
++H ++K N+L++ KI+D GLA+ G T E+ Y A ++ + ++
Sbjct: 121 VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTH-EVVTLWYRAPDVLMGSKKYS 179
Query: 337 EKSDVYSFGILIMEIVSG 354
D++S G + E+V+G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ +L++++ S G PL +++QG L
Sbjct: 65 NIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG----L 118
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 119 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 174
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 230
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 231 -PGVTSMPDYK 240
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 105/217 (48%), Gaps = 18/217 (8%)
Query: 150 IVTDGFAEQNVIASGDNG-VVYRAVLLDNMRAAVKLLMSNSV---SEEEDFIEKVEAIGQ 205
I +D + Q V+ G G V+ + AVK++ V +++E + +V+ + Q
Sbjct: 47 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 106
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
+ H N++KL+ + + LV E G L + K + +II+ G
Sbjct: 107 LDHPNIMKLYEFFEDKGYFYLVGEVYTGGE----LFDEIISRKRFSEVDAARIIRQVLSG 162
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHH---WNPKISDVGLAKLHGPEWSISTSCELRNSG 322
+ Y+H++ KIVH ++K N+LL+ N +I D GL+ E S ++ +
Sbjct: 163 ITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKMKDKIGTAY 217
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
Y+A E+ T ++EK DV+S G+++ ++SG P +
Sbjct: 218 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFN 252
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ +L++++ S G PL +++QG L
Sbjct: 66 NIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG----L 119
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 175
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 231
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 232 -PGVTSMPDYK 241
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 116
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 172
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 228
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 229 -PGVTSMPDYK 238
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ +L++++ S G PL +++QG L
Sbjct: 64 NIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG----L 117
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 118 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 173
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 229
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 230 -PGVTSMPDYK 239
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/265 (21%), Positives = 118/265 (44%), Gaps = 25/265 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
I G +G VY A+ + A++ + ++E I ++ + + K+ N+V +
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 87
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
G +V EY+ G+L + + + + + + + L +LH + +++H
Sbjct: 88 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN---QVIH 139
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++KS NILL + K++D G PE S S + ++A E+ R + + K
Sbjct: 140 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSXMVGTPYWMAPEVVTRKA-YGPKV 197
Query: 340 DVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKR 399
D++S GI+ +E++ G P P + + + PE+ + ++L
Sbjct: 198 DIWSLGIMAIEMIEGEPPYLNENP-------------LRALYLIATNGTPELQNPEKLSA 244
Query: 400 IILIAL-RCVDPDIKHRPKMGDVLR 423
I L RC++ D++ R ++L+
Sbjct: 245 IFRDFLNRCLEMDVEKRGSAKELLQ 269
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 178 MRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
++ AVK L ++E DF+ + I + H+N+V+ G ++ R ++ E + G+L
Sbjct: 62 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 121
Query: 237 QQWLHGSLGEAKP-------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +L E +P L + + + A G YL E+ +H ++ + N LL
Sbjct: 122 KSFLR----ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 174
Query: 290 DHHWN---PKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFG 345
KI D G+A+ ++ + C + ++ E + IF K+D +SFG
Sbjct: 175 TCPGPGRVAKIGDFGMAQDIYRASYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFG 233
Query: 346 ILIMEIVS-GRLP 357
+L+ EI S G +P
Sbjct: 234 VLLWEIFSLGYMP 246
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ +L++++ S G PL +++QG L
Sbjct: 64 NIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG----L 117
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 173
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 229
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 230 -PGVTSMPDYK 239
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ +L++++ S G PL +++QG L
Sbjct: 64 NIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG----L 117
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 173
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 229
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 230 -PGVTSMPDYK 239
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 116
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 172
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 228
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 229 -PGVTSMPDYK 238
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 7 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 66
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ +L++++ S G PL +++QG L
Sbjct: 67 NIVKLLD-VIHTENKLYLVFEFLHQ-DLKKFMDASALTGIPLPLIKSYLFQLLQG----L 120
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 121 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 176
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 232
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 233 -PGVTSMPDYK 242
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 66 NIVKLLD-VIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 119
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 120 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 175
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 231
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 232 -PGVTSMPDYK 241
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 50/193 (25%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 178 MRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
++ AVK L S +E DF+ + I + H+N+V+ G ++ R ++ E + G+L
Sbjct: 76 LQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 135
Query: 237 QQWLHGSLGEAKP-------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +L E +P L + + + A G YL E+ +H ++ + N LL
Sbjct: 136 KSFLR----ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 188
Query: 290 DHHWN---PKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFG 345
KI D G+A+ ++ + C + ++ E + IF K+D +SFG
Sbjct: 189 TCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFG 247
Query: 346 ILIMEIVS-GRLP 357
+L+ EI S G +P
Sbjct: 248 VLLWEIFSLGYMP 260
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 121/251 (48%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 4 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 63
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L++++ S G PL +++QG L
Sbjct: 64 NIVKLLD-VIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQG----L 117
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 118 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 173
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 229
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 230 -PGVTSMPDYK 239
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 19/190 (10%)
Query: 178 MRAAVKLLMSNS-VSEEEDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
++ AVK+L S + E+E + +++ + + +H+N+V L G C G +++ EY G+
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 236 LQQWLH--GSLGEAKPL------TWDTR--MKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
L +L + E P T TR + A+G+A+L +H ++ +
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASK---NCIHRDVAAR 193
Query: 286 NILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYS 343
N+LL + KI D GLA+ ++ + + + L ++A E S ++ +SDV+S
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPE-SIFDCVYTVQSDVWS 251
Query: 344 FGILIMEIVS 353
+GIL+ EI S
Sbjct: 252 YGILLWEIFS 261
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 78/162 (48%), Gaps = 10/162 (6%)
Query: 199 KVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKI 258
++E + + H N++K+F + N +V E + G L + + + K L+ ++
Sbjct: 70 EIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAEL 129
Query: 259 IQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDH---HWNPKISDVGLAKLHGPEWSISTS 315
++ LAY H +VH ++K NIL H KI D GLA+L + + +
Sbjct: 130 MKQMMNALAYFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTNA 186
Query: 316 CELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ Y+A E+ R F K D++S G+++ +++G LP
Sbjct: 187 A--GTALYMAPEVFKRDVTF--KCDIWSAGVVMYFLLTGCLP 224
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 26/223 (11%)
Query: 149 DIVT-----DGFAEQNVIASGDNGVVYRA-VLLDNMRAAVKLLMSNSVSEE---EDFIEK 199
DI+T D F + G G VY A + A+K+L + + +E +
Sbjct: 14 DILTRHFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRRE 73
Query: 200 VEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTR--MK 257
+E + H N+++L+ Y + + L+ EY G L + L K T+D +
Sbjct: 74 IEIQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQ------KSCTFDEQRTAT 127
Query: 258 IIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCE 317
I++ A L Y H K++H ++K N+LL KI+D G + +H P T C
Sbjct: 128 IMEELADALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWS-VHAPSLRRKTMCG 183
Query: 318 LRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
+ YL E+ GR + NEK D++ G+L E++ G P +
Sbjct: 184 TLD--YLPPEMIEGR--MHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 94/191 (49%), Gaps = 23/191 (12%)
Query: 174 LLDNMRA--AVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRI---LVY 228
L DN A AVK L + ++ DF +++ + + +VK G G R LV
Sbjct: 31 LGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSY-GPGRPELRLVM 89
Query: 229 EYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
EY+ +G L+ +L L ++ L + +++ KG+ YL + VH ++ +
Sbjct: 90 EYLPSGCLRDFLQRHRARLDASRLLLYSSQI------CKGMEYLGSR---RCVHRDLAAR 140
Query: 286 NILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVY 342
NIL++ + KI+D GLAKL + E S Y E LS +IF+ +SDV+
Sbjct: 141 NILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESLS--DNIFSRQSDVW 198
Query: 343 SFGILIMEIVS 353
SFG+++ E+ +
Sbjct: 199 SFGVVLYELFT 209
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 96/199 (48%), Gaps = 28/199 (14%)
Query: 178 MRAAVKLLMSNS-VSEEEDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
++ AVK+L S + E+E + +++ + + +H+N+V L G C G +++ EY G+
Sbjct: 62 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 121
Query: 236 LQQWL----HGSLG---------------EAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK 276
L +L LG + +PL + A+G+A+L
Sbjct: 122 LLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELRDLLHFSSQVAQGMAFLASK---N 178
Query: 277 IVHHNMKSSNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSI 334
+H ++ + N+LL + KI D GLA+ ++ + + + L ++A E S +
Sbjct: 179 CIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPE-SIFDCV 236
Query: 335 FNEKSDVYSFGILIMEIVS 353
+ +SDV+S+GIL+ EI S
Sbjct: 237 YTVQSDVWSYGILLWEIFS 255
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 178 MRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
++ AVK L ++E DF+ + I + H+N+V+ G ++ R ++ E + G+L
Sbjct: 102 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 161
Query: 237 QQWLHGSLGEAKP-------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +L E +P L + + + A G YL E+ +H ++ + N LL
Sbjct: 162 KSFLR----ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 214
Query: 290 DHHWN---PKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFG 345
KI D G+A+ ++ + C + ++ E + IF K+D +SFG
Sbjct: 215 TCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFG 273
Query: 346 ILIMEIVS-GRLP 357
+L+ EI S G +P
Sbjct: 274 VLLWEIFSLGYMP 286
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 90/193 (46%), Gaps = 21/193 (10%)
Query: 178 MRAAVKLLMSNSVSEEE-DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL 236
++ AVK L ++E DF+ + I + H+N+V+ G ++ R ++ E + G+L
Sbjct: 79 LQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDL 138
Query: 237 QQWLHGSLGEAKP-------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +L E +P L + + + A G YL E+ +H ++ + N LL
Sbjct: 139 KSFLR----ETRPRPSQPSSLAMLDLLHVARDIACGCQYLEEN---HFIHRDIAARNCLL 191
Query: 290 DHHWN---PKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFG 345
KI D G+A+ ++ + C + ++ E + IF K+D +SFG
Sbjct: 192 TCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKWMPPE-AFMEGIFTSKTDTWSFG 250
Query: 346 ILIMEIVS-GRLP 357
+L+ EI S G +P
Sbjct: 251 VLLWEIFSLGYMP 263
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 99/215 (46%), Gaps = 21/215 (9%)
Query: 150 IVTDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKH 208
+ +DG+ + I G R V NM AVK++ + E+ IE + GQ H
Sbjct: 24 VFSDGYVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSEE-IEILLRYGQ--H 80
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNL-QQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
N++ L +G++ LV E + G L + L + ++ ++ K +
Sbjct: 81 PNIITLKDVYDDGKHVYLVTELMRGGELLDKILRQKFFSEREASF-----VLHTIGKTVE 135
Query: 268 YLHEDIEPKIVHHNMKSSNIL-LDHHWNP---KISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +VH ++K SNIL +D NP +I D G AK L + T C N
Sbjct: 136 YLHSQ---GVVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN-- 190
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
++A E+ R ++E D++S GIL+ +++G P
Sbjct: 191 FVAPEVLKRQG-YDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 102/211 (48%), Gaps = 18/211 (8%)
Query: 153 DGFAEQNVIASGDNGVV----YRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKH 208
D F + + +G+ GVV +R L R + L + ++ + I +++ + +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQ--IIRELQVLHECNS 73
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAY 268
+V +G + E++D G+L Q L EAK + + K+ +GLAY
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----EAKRIPEEILGKVSIAVLRGLAY 129
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA-EE 327
L E + +I+H ++K SNIL++ K+ D G++ G + + Y+A E
Sbjct: 130 LRE--KHQIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMAPER 184
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLPV 358
L G + ++ +SD++S G+ ++E+ GR P+
Sbjct: 185 LQG--THYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 3 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 62
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L+ ++ S G PL +++QG L
Sbjct: 63 NIVKLLD-VIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQLLQG----L 116
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 117 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 172
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 228
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 229 -PGVTSMPDYK 238
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 96/190 (50%), Gaps = 19/190 (10%)
Query: 178 MRAAVKLLMSNS-VSEEEDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
++ AVK+L S + E+E + +++ + + +H+N+V L G C G +++ EY G+
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 236 LQQWLH--GSLGEAKPL------TWDTR--MKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
L +L + E P T TR + A+G+A+L +H ++ +
Sbjct: 137 LLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASK---NCIHRDVAAR 193
Query: 286 NILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYS 343
N+LL + KI D GLA+ ++ + + + L ++A E S ++ +SDV+S
Sbjct: 194 NVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPE-SIFDCVYTVQSDVWS 251
Query: 344 FGILIMEIVS 353
+GIL+ EI S
Sbjct: 252 YGILLWEIFS 261
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 119/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ +L+ ++ S G PL +++QG L
Sbjct: 66 NIVKLLD-VIHTENKLYLVFEFLHQ-DLKTFMDASALTGIPLPLIKSYLFQLLQG----L 119
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 175
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 231
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 232 -PGVTSMPDYK 241
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 6 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 65
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L+ ++ S G PL +++QG L
Sbjct: 66 NIVKLLD-VIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQG----L 119
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 175
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 231
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 232 -PGVTSMPDYK 241
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 154 GFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
GF E D G +Y LD R +K+ +++ E + + + G +
Sbjct: 200 GFGEVYGCRKADTGKMYAMKCLDKKR--IKMKQGETLALNERIMLSLVSTGDCP---FIV 254
Query: 214 LFGYCVEGQNRI-LVYEYIDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
Y +++ + + ++ G+L L HG EA D R + GL ++H
Sbjct: 255 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAE-IILGLEHMH 308
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA---KLHGPEWSISTSCELRNSGYLAEE 327
+V+ ++K +NILLD H + +ISD+GLA P S+ T GY+A E
Sbjct: 309 NRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT------HGYMAPE 359
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ + ++ +D +S G ++ +++ G P
Sbjct: 360 VLQKGVAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 120/251 (47%), Gaps = 23/251 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHK 209
+ F + I G GVVY+A L A+K + ++ +E I ++ + ++ H
Sbjct: 5 ENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHP 64
Query: 210 NLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGL 266
N+VKL + +N++ LV+E++ + +L+ ++ S G PL +++QG L
Sbjct: 65 NIVKLLD-VIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQLLQG----L 118
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
A+ H +++H ++K N+L++ K++D GLA+ G + E+ Y A
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVR-TYXHEVVTLWYRAP 174
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGR--LPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E+ ++ D++S G + E+V+ R P D Q+F I +++ ++ +
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRI--FRTLGTPDEVVW-- 230
Query: 385 DPKLPEMPSRK 395
P + MP K
Sbjct: 231 -PGVTSMPDYK 240
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 154 GFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
GF E D G +Y LD R +K+ +++ E + + + G +
Sbjct: 201 GFGEVYGCRKADTGKMYAMKCLDKKR--IKMKQGETLALNERIMLSLVSTGDCP---FIV 255
Query: 214 LFGYCVEGQNRI-LVYEYIDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
Y +++ + + ++ G+L L HG EA D R + GL ++H
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAE-IILGLEHMH 309
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA---KLHGPEWSISTSCELRNSGYLAEE 327
+V+ ++K +NILLD H + +ISD+GLA P S+ T GY+A E
Sbjct: 310 NRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT------HGYMAPE 360
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ + ++ +D +S G ++ +++ G P
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 87/185 (47%), Gaps = 20/185 (10%)
Query: 181 AVKLLMSNSVSE---EEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L + + E +VE ++H N+++L+GY + L+ EY G +
Sbjct: 38 ALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY 97
Query: 238 QWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ L E + T+ T + A L+Y H +++H ++K N+LL
Sbjct: 98 RELQKLSKFDEQRTATYITEL------ANALSYCHSK---RVIHRDIKPENLLLGSAGEL 148
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEKSDVYSFGILIMEIVSG 354
KI+D G + H P +T + YL E+ GR + +EK D++S G+L E + G
Sbjct: 149 KIADFGWS-CHAPSSRRTTLSGTLD--YLPPEMIEGR--MHDEKVDLWSLGVLCYEFLVG 203
Query: 355 RLPVD 359
+ P +
Sbjct: 204 KPPFE 208
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/198 (23%), Positives = 93/198 (46%), Gaps = 11/198 (5%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
I G +G VY A+ + A++ + ++E I ++ + + K+ N+V +
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYL 88
Query: 220 EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
G +V EY+ G+L + + + + + + + L +LH + +++H
Sbjct: 89 VGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCRECLQALEFLHSN---QVIH 140
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKS 339
++KS NILL + K++D G PE S S + ++A E+ R + + K
Sbjct: 141 RDIKSDNILLGMDGSVKLTDFGFCAQITPEQS-KRSXMVGTPYWMAPEVVTRKA-YGPKV 198
Query: 340 DVYSFGILIMEIVSGRLP 357
D++S GI+ +E++ G P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 154 GFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
GF E D G +Y LD R +K+ +++ E + + + G +
Sbjct: 201 GFGEVYGCRKADTGKMYAMKCLDKKR--IKMKQGETLALNERIMLSLVSTGDCP---FIV 255
Query: 214 LFGYCVEGQNRI-LVYEYIDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
Y +++ + + ++ G+L L HG EA D R + GL ++H
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAE-IILGLEHMH 309
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA---KLHGPEWSISTSCELRNSGYLAEE 327
+V+ ++K +NILLD H + +ISD+GLA P S+ T GY+A E
Sbjct: 310 NRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT------HGYMAPE 360
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ + ++ +D +S G ++ +++ G P
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 93/210 (44%), Gaps = 26/210 (12%)
Query: 154 GFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
GF E D G +Y LD R +K+ +++ E + + + G +
Sbjct: 201 GFGEVYGCRKADTGKMYAMKCLDKKR--IKMKQGETLALNERIMLSLVSTGDCP---FIV 255
Query: 214 LFGYCVEGQNRI-LVYEYIDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
Y +++ + + ++ G+L L HG EA D R + GL ++H
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEA-----DMRFYAAE-IILGLEHMH 309
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA---KLHGPEWSISTSCELRNSGYLAEE 327
+V+ ++K +NILLD H + +ISD+GLA P S+ T GY+A E
Sbjct: 310 NRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGT------HGYMAPE 360
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ + ++ +D +S G ++ +++ G P
Sbjct: 361 VLQKGVAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 97/209 (46%), Gaps = 20/209 (9%)
Query: 160 VIASGDNGVVYRAVLLD----NMRAAVKLL-MSNSVSEE-EDFIEKVEAIGQVKHKNLVK 213
++ G+ G V L +++ AVK + + NS E E+F+ + + H N+++
Sbjct: 41 ILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIR 100
Query: 214 LFGYCVEGQNR-----ILVYEYIDNGNLQQWLHGSLGEAKP--LTWDTRMKIIQGTAKGL 266
L G C+E ++ +++ ++ G+L +L S E P + T +K + A G+
Sbjct: 101 LLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGM 160
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYL 324
YL +H ++ + N +L ++D GL+K G + ++
Sbjct: 161 EYLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIA 217
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVS 353
E L+ R ++ KSDV++FG+ + EI +
Sbjct: 218 IESLADR--VYTSKSDVWAFGVTMWEIAT 244
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMR------AAVKLLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + A ++L + S ++ +++ + V +
Sbjct: 51 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDN 110
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 111 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 163
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 164 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 215
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 216 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 255
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 26/194 (13%)
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSC 316
KI T K L +L E++ KI+H ++K SNILLD N K+ D G++ + +
Sbjct: 129 KITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISG-----QLVDSIA 181
Query: 317 ELRNSG---YLAEEL---SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDW 370
+ R++G Y+A E S ++ +SDV+S GI + E+ +GR P VF D
Sbjct: 182 KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYP-KWNSVF--DQ 238
Query: 371 LKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDL 430
L +V P+L R+ I C+ D RPK ++L+
Sbjct: 239 LTQVVKGDP------PQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLK----HPF 288
Query: 431 LLREEYRIKRAASY 444
+L E R A Y
Sbjct: 289 ILMYEERAVEVACY 302
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 104/220 (47%), Gaps = 18/220 (8%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMR---AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKN 210
F + I G G V++ + DN A+K++ + + E ED +++ + Q
Sbjct: 25 FTKLERIGKGSFGEVFKGI--DNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSY 82
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
+ K +G ++G ++ EY+ G+ L A P +++ KGL YLH
Sbjct: 83 VTKYYGSYLKGSKLWIIMEYLGGGSALDLLR-----AGPFDEFQIATMLKEILKGLDYLH 137
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSG 330
+ K +H ++K++N+LL + K++D G+A + I + + ++A E+
Sbjct: 138 SE---KKIHRDIKAANVLLSEQGDVKLADFGVAG-QLTDTQIKRNTFVGTPFWMAPEVI- 192
Query: 331 RTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQ--VFLI 368
+ S ++ K+D++S GI +E+ G P P +FLI
Sbjct: 193 QQSAYDSKADIWSLGITAIELAKGEPPNSDMHPMRVLFLI 232
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 98/208 (47%), Gaps = 31/208 (14%)
Query: 179 RAAVKLLMSNSVSEEEDFIEKVEAIGQV--KHKNLVKLFGYCVEGQNR----ILVYEYID 232
+ AVK+ + +EE + + E V +H+N++ ++G L+ +Y +
Sbjct: 62 KVAVKVFFT---TEEASWFRETEIYQTVLMRHENILGFIAADIKGTGSWTQLYLITDYHE 118
Query: 233 NGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI-----EPKIVHHNMKSSNI 287
NG+L +L + +AK + +K+ + GL +LH +I +P I H ++KS NI
Sbjct: 119 NGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNI 173
Query: 288 LLDHHWNPKISDVGLAKLH---GPEWSISTSCELRNSGYLAEELSGRTSIFNE-----KS 339
L+ + I+D+GLA E I + + Y+ E+ + N +
Sbjct: 174 LVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPPEVLDESLNRNHFQSYIMA 233
Query: 340 DVYSFGILIMEI----VSGRLPVDYSQP 363
D+YSFG+++ E+ VSG + +Y P
Sbjct: 234 DMYSFGLILWEVARRCVSGGIVEEYQLP 261
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 34/223 (15%)
Query: 160 VIASGDNGVVYRAVLLD------NMRAAVKLLMSNS-VSEEEDFIEKVEAIGQV-KHKNL 211
V+ SG G V A +++ AVK+L + SE E + +++ + Q+ H+N+
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLHGS----------------LGEAKPL---TW 252
V L G C L++EY G+L +L L E + L T+
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 253 DTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK--LHGPEW 310
+ + AKG+ +L VH ++ + N+L+ H KI D GLA+ + +
Sbjct: 172 EDLLCFAYQVAKGMEFLEF---KSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNY 228
Query: 311 SISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
+ + L E L I+ KSDV+S+GIL+ EI S
Sbjct: 229 VVRGNARLPVKWMAPESLF--EGIYTIKSDVWSYGILLWEIFS 269
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 180 AAVKLLMSNSV-SEEEDFIEKVEAIGQVKHK-NLVKLFGYCVE-GQNRILVYEYIDNGNL 236
AVK+L + SE + +++ + + H N+V L G C + G +++ E+ GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 237 QQWLHGSLGEAKP--------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNIL 288
+L E P LT + + AKG+ +L K +H ++ + NIL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHRDLAARNIL 176
Query: 289 LDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGI 346
L KI D GLA+ P++ L E + R ++ +SDV+SFG+
Sbjct: 177 LSEKNVVKIXDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR--VYTIQSDVWSFGV 234
Query: 347 LIMEIVS 353
L+ EI S
Sbjct: 235 LLWEIFS 241
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 103/217 (47%), Gaps = 18/217 (8%)
Query: 150 IVTDGFAEQNVIASGDNG-VVYRAVLLDNMRAAVKLLMSNSV---SEEEDFIEKVEAIGQ 205
I +D + Q V+ G G V+ + AVK++ V +++E + +V+ + Q
Sbjct: 23 IFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQ 82
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
+ H N+ KL+ + + LV E G L + K + +II+ G
Sbjct: 83 LDHPNIXKLYEFFEDKGYFYLVGEVYTGGE----LFDEIISRKRFSEVDAARIIRQVLSG 138
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHH---WNPKISDVGLAKLHGPEWSISTSCELRNSG 322
+ Y H++ KIVH ++K N+LL+ N +I D GL+ E S ++ +
Sbjct: 139 ITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF--EASKKXKDKIGTAY 193
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
Y+A E+ T ++EK DV+S G+++ ++SG P +
Sbjct: 194 YIAPEVLHGT--YDEKCDVWSTGVILYILLSGCPPFN 228
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 174 LLDNMRAAVKLLMSNSVSEEEDFIE---KVEAIGQVKHKNLVKLF----GYCVEGQNRIL 226
L D+ AVK+L ++ + ++ + + + H +V ++ G +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 227 VYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSN 286
V EY+D L+ +H P+T +++I + L + H++ I+H ++K +N
Sbjct: 94 VMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPAN 146
Query: 287 ILLDHHWNPKISDVGLAKLHGPEWS--ISTSCELRNSGYLAEELSGRTSIFNEKSDVYSF 344
IL+ K+ D G+A+ + T+ + + YL+ E R + +SDVYS
Sbjct: 147 ILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPE-QARGDSVDARSDVYSL 205
Query: 345 GILIMEIVSGRLPVDYSQP 363
G ++ E+++G P P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 27 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 86
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 87 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 139
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 140 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 191
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 192 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 231
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/220 (24%), Positives = 105/220 (47%), Gaps = 18/220 (8%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMR---AAVKLL-MSNSVSEEEDFIEKVEAIGQVKHKN 210
F + + I G G VY+ + DN A+K++ + + E ED +++ + Q
Sbjct: 21 FTKLDRIGKGSFGEVYKGI--DNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPY 78
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
+ + FG ++ ++ EY+ G+ L + PL I++ KGL YLH
Sbjct: 79 ITRYFGSYLKSTKLWIIMEYLGGGSALDLL-----KPGPLEETYIATILREILKGLDYLH 133
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSG 330
+ + +H ++K++N+LL + K++D G+A + I + + ++A E+
Sbjct: 134 SE---RKIHRDIKAANVLLSEQGDVKLADFGVAG-QLTDTQIKRNXFVGTPFWMAPEVI- 188
Query: 331 RTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQ--VFLI 368
+ S ++ K+D++S GI +E+ G P P +FLI
Sbjct: 189 KQSAYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLI 228
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 85/187 (45%), Gaps = 18/187 (9%)
Query: 180 AAVKLLMSNSV-SEEEDFIEKVEAIGQVKHK-NLVKLFGYCVE-GQNRILVYEYIDNGNL 236
AVK+L + SE + +++ + + H N+V L G C + G +++ E+ GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 237 QQWLHGSLGEAKP--------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNIL 288
+L E P LT + + AKG+ +L K +H ++ + NIL
Sbjct: 120 STYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASR---KXIHRDLAARNIL 176
Query: 289 LDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGI 346
L KI D GLA+ P++ L E + R ++ +SDV+SFG+
Sbjct: 177 LSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR--VYTIQSDVWSFGV 234
Query: 347 LIMEIVS 353
L+ EI S
Sbjct: 235 LLWEIFS 241
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKG 130
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 182
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 183 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 107/221 (48%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V++SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 17 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 181
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 182 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/214 (26%), Positives = 104/214 (48%), Gaps = 28/214 (13%)
Query: 160 VIASGDNGVVYRAVLLDN-----MRAAVKLLMSN-SVSEEEDFIEKVEAIGQVKHKNLVK 213
V+ SG G VY+ + + + + A+K+L N S ++ +++ + V + +
Sbjct: 24 VLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYVSR 83
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
L G C+ + LV + + G L + G LG L W ++ AKG++YL
Sbjct: 84 LLGICLTSTVQ-LVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQI------AKGMSYL- 135
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSG 330
ED+ ++VH ++ + N+L+ + KI+D GLA+L I + + G + +
Sbjct: 136 EDV--RLVHRDLAARNVLVKSPNHVKITDFGLARL----LDIDETEYHADGGKVPIKWMA 189
Query: 331 RTSI----FNEKSDVYSFGILIMEIVS-GRLPVD 359
SI F +SDV+S+G+ + E+++ G P D
Sbjct: 190 LESILRRRFTHQSDVWSYGVTVWELMTFGAKPYD 223
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/199 (22%), Positives = 90/199 (45%), Gaps = 17/199 (8%)
Query: 174 LLDNMRAAVKLLMSNSVSEEEDFIE---KVEAIGQVKHKNLVKLF----GYCVEGQNRIL 226
L D+ AVK+L ++ + ++ + + + H +V ++ G +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 227 VYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSN 286
V EY+D L+ +H P+T +++I + L + H++ I+H ++K +N
Sbjct: 94 VMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPAN 146
Query: 287 ILLDHHWNPKISDVGLAKLHGPEWS--ISTSCELRNSGYLAEELSGRTSIFNEKSDVYSF 344
I++ K+ D G+A+ + T+ + + YL+ E R + +SDVYS
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-QARGDSVDARSDVYSL 205
Query: 345 GILIMEIVSGRLPVDYSQP 363
G ++ E+++G P P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 89/199 (44%), Gaps = 17/199 (8%)
Query: 174 LLDNMRAAVKLLMSNSVSEEE---DFIEKVEAIGQVKHKNLVKLF----GYCVEGQNRIL 226
L D+ AVK+L ++ + F + + + H +V ++ G +
Sbjct: 34 LRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAETPAGPLPYI 93
Query: 227 VYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSN 286
V EY+D L+ +H P+T +++I + L + H++ I+H ++K +N
Sbjct: 94 VMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPAN 146
Query: 287 ILLDHHWNPKISDVGLAKLHGPEWS--ISTSCELRNSGYLAEELSGRTSIFNEKSDVYSF 344
I++ K+ D G+A+ + T+ + + YL+ E R + +SDVYS
Sbjct: 147 IMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-QARGDSVDARSDVYSL 205
Query: 345 GILIMEIVSGRLPVDYSQP 363
G ++ E+++G P P
Sbjct: 206 GCVLYEVLTGEPPFTGDSP 224
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 133
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 185
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 186 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 181
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 182 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 107/221 (48%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V++SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 84 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 188
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 189 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 18 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 77
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 78 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 130
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 131 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 182
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 183 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 222
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 181
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 182 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 161 IASGDNGVVYRAVLLDNMR-AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
I G G+V A + + + AVK + E +V + +H+N+V+++ +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 218
Query: 220 EGQNRILVYEYIDNGNLQQWL-HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
G +V E+++ G L + H + E + + + L+ LH ++
Sbjct: 219 VGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHAQ---GVI 269
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY-LAEELSGRTSIFNE 337
H ++KS +ILL H K+SD G E + L + Y +A EL R +
Sbjct: 270 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLP-YGP 326
Query: 338 KSDVYSFGILIMEIVSGRLP 357
+ D++S GI+++E+V G P
Sbjct: 327 EVDIWSLGIMVIEMVDGEPP 346
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 183
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 184 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 54/284 (19%)
Query: 158 QNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV--KHKNLVKLF 215
Q I G G V+R AVK+ S EE + + E V +H+N++
Sbjct: 8 QESIGKGRFGEVWRGKWRGE-EVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGF- 62
Query: 216 GYCVEGQNRILVYEYIDNGNLQQ-WL------HGSLGEA---KPLTWDTRMKIIQGTAKG 265
+ N+ DNG Q WL HGSL + +T + +K+ TA G
Sbjct: 63 ---IAADNK-------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG 112
Query: 266 LAYLHEDI-----EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEW---SISTSCE 317
LA+LH +I +P I H ++KS NIL+ + I+D+GLA H I+ +
Sbjct: 113 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 172
Query: 318 LRNSGYLAEEL---SGRTSIFN--EKSDVYSFGILIMEIVS----GRLPVDYSQPQVFL- 367
+ Y+A E+ S F +++D+Y+ G++ EI G + DY P L
Sbjct: 173 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 232
Query: 368 -----IDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALR 406
++ ++ +V +QK L P +P E R++ +R
Sbjct: 233 PSDPSVEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMR 272
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 107/221 (48%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V++SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 24 FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 188
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 189 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 131/286 (45%), Gaps = 50/286 (17%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 71 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 123
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 124 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 175
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQ 378
++A E S I+ +SDV+S+G+ + E+++ G P D +
Sbjct: 176 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD--------------GIPAS 220
Query: 379 KIAYVLDP--KLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
+I+ +L+ +LP+ P + +I ++C D RPK +++
Sbjct: 221 EISSILEKGERLPQPPICT--IDVYMIMVKCWMIDADSRPKFRELI 264
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 160 VIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV--KHKNLVKLFGY 217
+ G G V+R L AVK+ S +E+ + + E V +H N++
Sbjct: 15 CVGKGRYGEVWRG-LWHGESVAVKIFSSR---DEQSWFRETEIYNTVLLRHDNILGFIAS 70
Query: 218 CVEGQNR----ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
+ +N L+ Y ++G+L +L + + L +++ A GLA+LH +I
Sbjct: 71 DMTSRNSSTQLWLITHYHEHGSLYDFL-----QRQTLEPHLALRLAVSAACGLAHLHVEI 125
Query: 274 -----EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLH--GPEW-SISTSCELRNSGYLA 325
+P I H + KS N+L+ + I+D+GLA +H G ++ I + + Y+A
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMA 185
Query: 326 EEL---SGRTSIFN--EKSDVYSFGILIMEI----VSGRLPVDYSQPQVFLIDWLKSMVA 376
E+ RT F + +D+++FG+++ EI + + DY P ++ S
Sbjct: 186 PEVLDEQIRTDCFESYKWTDIWAFGLVLWEIARRTIVNGIVEDYRPPFYDVVPNDPSFED 245
Query: 377 QQKIAYVLDPKLPEMPSR 394
+K+ V D + P +P+R
Sbjct: 246 MKKVVCV-DQQTPTIPNR 262
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 80 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 184
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 185 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 131/286 (45%), Gaps = 50/286 (17%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 23 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 82
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 83 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 135
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 136 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 187
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQ 378
++A E S I+ +SDV+S+G+ + E+++ G P D +
Sbjct: 188 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD--------------GIPAS 232
Query: 379 KIAYVLDP--KLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
+I+ +L+ +LP+ P + +I ++C D RPK +++
Sbjct: 233 EISSILEKGERLPQPPICT--IDVYMIMVKCWMIDADSRPKFRELI 276
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 96/215 (44%), Gaps = 32/215 (14%)
Query: 160 VIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDFIEKVEAIGQVK-HKNLVKLFGY 217
V+A G VY A + + R A+K L+SN + I++V + ++ H N+V+
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSA 94
Query: 218 CV-------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
GQ L+ + G L ++L + PL+ DT +KI T + + ++H
Sbjct: 95 ASIGKEESDTGQAEFLLLTELCKGQLVEFLK-KMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSISTSCELRNSGYLAEEL 328
+P I+H ++K N+LL + K+ D G A H P++S S + + EE+
Sbjct: 154 RQ-KPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA----QRRALVEEEI 208
Query: 329 SGRTSIF---------------NEKSDVYSFGILI 348
+ T+ EK D+++ G ++
Sbjct: 209 TRNTTPMYRTPEIIDLYSNFPIGEKQDIWALGCIL 243
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 184
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 185 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 131/286 (45%), Gaps = 50/286 (17%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 183
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQ 378
++A E S I+ +SDV+S+G+ + E+++ G P D +
Sbjct: 184 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD--------------GIPAS 228
Query: 379 KIAYVLDP--KLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
+I+ +L+ +LP+ P + +I ++C D RPK +++
Sbjct: 229 EISSILEKGERLPQPPICT--IDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 188
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 189 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 181
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 182 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/286 (23%), Positives = 131/286 (45%), Gaps = 50/286 (17%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 42 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 101
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 102 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 154
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 155 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 206
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQ 378
++A E S I+ +SDV+S+G+ + E+++ G P D +
Sbjct: 207 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD--------------GIPAS 251
Query: 379 KIAYVLDP--KLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVL 422
+I+ +L+ +LP+ P + +I ++C D RPK +++
Sbjct: 252 EISSILEKGERLPQPPICT--IDVYMIMVKCWMIDADSRPKFRELI 295
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 54/284 (19%)
Query: 158 QNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV--KHKNLVKLF 215
Q I G G V+R AVK+ S EE + + E V +H+N++
Sbjct: 9 QESIGKGRFGEVWRGKWRGE-EVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGF- 63
Query: 216 GYCVEGQNRILVYEYIDNGNLQQ-WL------HGSLGEA---KPLTWDTRMKIIQGTAKG 265
+ N+ DNG Q WL HGSL + +T + +K+ TA G
Sbjct: 64 ---IAADNK-------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG 113
Query: 266 LAYLHEDI-----EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEW---SISTSCE 317
LA+LH +I +P I H ++KS NIL+ + I+D+GLA H I+ +
Sbjct: 114 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 173
Query: 318 LRNSGYLAEEL---SGRTSIFN--EKSDVYSFGILIMEIVS----GRLPVDYSQPQVFL- 367
+ Y+A E+ S F +++D+Y+ G++ EI G + DY P L
Sbjct: 174 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 233
Query: 368 -----IDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALR 406
++ ++ +V +QK L P +P E R++ +R
Sbjct: 234 PSDPSVEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMR 273
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 184
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 185 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 181
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 182 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 103/224 (45%), Gaps = 47/224 (20%)
Query: 160 VIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEK--VEAIGQVKHKNLVKLFGY 217
+I G G VY+ L D AVK+ S + ++FI + + + ++H N+ +
Sbjct: 20 LIGRGRYGAVYKGSL-DERPVAVKVF---SFANRQNFINEKNIYRVPLMEHDNIARF--- 72
Query: 218 CVEGQNRI---------LVYEYIDNGNLQQWL--HGSLGEAKPLTWDTRMKIIQGTAKGL 266
+ G R+ LV EY NG+L ++L H S W + ++ +GL
Sbjct: 73 -IVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-------DWVSSCRLAHSVTRGL 124
Query: 267 AYLHEDI------EPKIVHHNMKSSNILLDHHWNPKISDVGLA-KLHG------PEWSIS 313
AYLH ++ +P I H ++ S N+L+ + ISD GL+ +L G E +
Sbjct: 125 AYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNA 184
Query: 314 TSCELRNSGYLAEE-LSGRTSIFNEKS-----DVYSFGILIMEI 351
E+ Y+A E L G ++ + +S D+Y+ G++ EI
Sbjct: 185 AISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEI 228
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 20 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 79
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 80 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 132
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 133 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 184
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 185 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 224
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 155 FAEQNVIASGDNGVVY--RAVLLDNMRAAVKLLMSNSVSEE--EDFIEKVEAIGQVKHKN 210
F++ I G G VY R V + A K+ S S E +D I++V + +++H N
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 115
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
++ G + LV EY G+ L KPL + G +GLAYLH
Sbjct: 116 TIQYRGCYLREHTAWLVMEYC-LGSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLH 171
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE--L 328
++H ++K+ NILL K+ D G A + P + + ++A E L
Sbjct: 172 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-----ANXFVGTPYWMAPEVIL 223
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPV 358
+ ++ K DV+S GI +E+ + P+
Sbjct: 224 AMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 54/284 (19%)
Query: 158 QNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV--KHKNLVKLF 215
Q I G G V+R AVK+ S EE + + E V +H+N++
Sbjct: 11 QESIGKGRFGEVWRGKWRGE-EVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGF- 65
Query: 216 GYCVEGQNRILVYEYIDNGNLQQ-WL------HGSLGEA---KPLTWDTRMKIIQGTAKG 265
+ N+ DNG Q WL HGSL + +T + +K+ TA G
Sbjct: 66 ---IAADNK-------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG 115
Query: 266 LAYLHEDI-----EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEW---SISTSCE 317
LA+LH +I +P I H ++KS NIL+ + I+D+GLA H I+ +
Sbjct: 116 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 175
Query: 318 LRNSGYLAEEL---SGRTSIFN--EKSDVYSFGILIMEIVS----GRLPVDYSQPQVFL- 367
+ Y+A E+ S F +++D+Y+ G++ EI G + DY P L
Sbjct: 176 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 235
Query: 368 -----IDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALR 406
++ ++ +V +QK L P +P E R++ +R
Sbjct: 236 PSDPSVEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMR 275
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 54/284 (19%)
Query: 158 QNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV--KHKNLVKLF 215
Q I G G V+R AVK+ S EE + + E V +H+N++
Sbjct: 14 QESIGKGRFGEVWRGKWRGE-EVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGF- 68
Query: 216 GYCVEGQNRILVYEYIDNGNLQQ-WL------HGSLGEA---KPLTWDTRMKIIQGTAKG 265
+ N+ DNG Q WL HGSL + +T + +K+ TA G
Sbjct: 69 ---IAADNK-------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG 118
Query: 266 LAYLHEDI-----EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEW---SISTSCE 317
LA+LH +I +P I H ++KS NIL+ + I+D+GLA H I+ +
Sbjct: 119 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 178
Query: 318 LRNSGYLAEEL---SGRTSIFN--EKSDVYSFGILIMEIVS----GRLPVDYSQPQVFL- 367
+ Y+A E+ S F +++D+Y+ G++ EI G + DY P L
Sbjct: 179 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 238
Query: 368 -----IDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALR 406
++ ++ +V +QK L P +P E R++ +R
Sbjct: 239 PSDPSVEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMR 278
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 10/140 (7%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
+V EY+D L+ +H P+T +++I + L + H++ I+H ++K +
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 286 NILLDHHWNPKISDVGLAKLHGPEWS--ISTSCELRNSGYLAEELSGRTSIFNEKSDVYS 343
NI++ K+ D G+A+ + T+ + + YL+ E R + +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-QARGDSVDARSDVYS 204
Query: 344 FGILIMEIVSGRLPVDYSQP 363
G ++ E+++G P P
Sbjct: 205 LGCVLYEVLTGEPPFTGDSP 224
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 10/140 (7%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
+V EY+D L+ +H P+T +++I + L + H++ I+H ++K +
Sbjct: 93 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPA 145
Query: 286 NILLDHHWNPKISDVGLAKLHGPEWS--ISTSCELRNSGYLAEELSGRTSIFNEKSDVYS 343
NI++ K+ D G+A+ + T+ + + YL+ E R + +SDVYS
Sbjct: 146 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-QARGDSVDARSDVYS 204
Query: 344 FGILIMEIVSGRLPVDYSQP 363
G ++ E+++G P P
Sbjct: 205 LGCVLYEVLTGEPPFTGDSP 224
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 93/210 (44%), Gaps = 18/210 (8%)
Query: 155 FAEQNVIASGDNGVVY--RAVLLDNMRAAVKLLMSNSVSEE--EDFIEKVEAIGQVKHKN 210
F++ I G G VY R V + A K+ S S E +D I++V + +++H N
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPN 76
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
++ G + LV EY G+ L KPL + G +GLAYLH
Sbjct: 77 TIQYRGCYLREHTAWLVMEYC-LGSASDLLEV---HKKPLQEVEIAAVTHGALQGLAYLH 132
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE--L 328
++H ++K+ NILL K+ D G A + P + + ++A E L
Sbjct: 133 SH---NMIHRDVKAGNILLSEPGLVKLGDFGSASIMAP-----ANXFVGTPYWMAPEVIL 184
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPV 358
+ ++ K DV+S GI +E+ + P+
Sbjct: 185 AMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 54/284 (19%)
Query: 158 QNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV--KHKNLVKLF 215
Q I G G V+R AVK+ S EE + + E V +H+N++
Sbjct: 47 QESIGKGRFGEVWRGKWRGE-EVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGF- 101
Query: 216 GYCVEGQNRILVYEYIDNGNLQQ-WL------HGSLGEA---KPLTWDTRMKIIQGTAKG 265
+ N+ DNG Q WL HGSL + +T + +K+ TA G
Sbjct: 102 ---IAADNK-------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG 151
Query: 266 LAYLHEDI-----EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEW---SISTSCE 317
LA+LH +I +P I H ++KS NIL+ + I+D+GLA H I+ +
Sbjct: 152 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 211
Query: 318 LRNSGYLAEEL---SGRTSIFN--EKSDVYSFGILIMEIVS----GRLPVDYSQPQVFL- 367
+ Y+A E+ S F +++D+Y+ G++ EI G + DY P L
Sbjct: 212 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 271
Query: 368 -----IDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALR 406
++ ++ +V +QK L P +P E R++ +R
Sbjct: 272 PSDPSVEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMR 311
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 123/284 (43%), Gaps = 54/284 (19%)
Query: 158 QNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV--KHKNLVKLF 215
Q I G G V+R AVK+ S EE + + E V +H+N++
Sbjct: 34 QESIGKGRFGEVWRGKWRGE-EVAVKIFSSR---EERSWFREAEIYQTVMLRHENILGF- 88
Query: 216 GYCVEGQNRILVYEYIDNGNLQQ-WL------HGSLGEA---KPLTWDTRMKIIQGTAKG 265
+ N+ DNG Q WL HGSL + +T + +K+ TA G
Sbjct: 89 ---IAADNK-------DNGTWTQLWLVSDYHEHGSLFDYLNRYTVTVEGMIKLALSTASG 138
Query: 266 LAYLHEDI-----EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEW---SISTSCE 317
LA+LH +I +P I H ++KS NIL+ + I+D+GLA H I+ +
Sbjct: 139 LAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHR 198
Query: 318 LRNSGYLAEEL---SGRTSIFN--EKSDVYSFGILIMEIVS----GRLPVDYSQPQVFL- 367
+ Y+A E+ S F +++D+Y+ G++ EI G + DY P L
Sbjct: 199 VGTKRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDLV 258
Query: 368 -----IDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALR 406
++ ++ +V +QK L P +P E R++ +R
Sbjct: 259 PSDPSVEEMRKVVCEQK----LRPNIPNRWQSCEALRVMAKIMR 298
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 68/140 (48%), Gaps = 10/140 (7%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
+V EY+D L+ +H P+T +++I + L + H++ I+H ++K +
Sbjct: 110 IVMEYVDGVTLRDIVHTE----GPMTPKRAIEVIADACQALNFSHQN---GIIHRDVKPA 162
Query: 286 NILLDHHWNPKISDVGLAKLHGPEWS--ISTSCELRNSGYLAEELSGRTSIFNEKSDVYS 343
NI++ K+ D G+A+ + T+ + + YL+ E R + +SDVYS
Sbjct: 163 NIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPE-QARGDSVDARSDVYS 221
Query: 344 FGILIMEIVSGRLPVDYSQP 363
G ++ E+++G P P
Sbjct: 222 LGCVLYEVLTGEPPFTGDSP 241
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 161 IASGDNGVVYRAVLLDNMR-AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
I G G+V A + + + AVK + E +V + +H+N+V+++ +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 96
Query: 220 EGQNRILVYEYIDNGNLQQWL-HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
G +V E+++ G L + H + E + + + L+ LH ++
Sbjct: 97 VGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHAQ---GVI 147
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY-LAEELSGRTSIFNE 337
H ++KS +ILL H K+SD G E + L + Y +A EL R +
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLP-YGP 204
Query: 338 KSDVYSFGILIMEIVSGRLP 357
+ D++S GI+++E+V G P
Sbjct: 205 EVDIWSLGIMVIEMVDGEPP 224
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 179 RAAVKLLMSNSVSEE-EDFIEKVEAIGQVKHKNLVKLFGYCVE-GQNRI-LVYEYIDNGN 235
+ AVK L S D +++E + + H+N+VK G C E G N I L+ E++ +G+
Sbjct: 52 QVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 111
Query: 236 LQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
L+++L + + ++K KG+ YL + VH ++ + N+L++
Sbjct: 112 LKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQV 165
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEIV 352
KI D GL K + T + R+S Y E L S F SDV+SFG+ + E++
Sbjct: 166 KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL--MQSKFYIASDVWSFGVTLHELL 223
Query: 353 S 353
+
Sbjct: 224 T 224
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 111/235 (47%), Gaps = 33/235 (14%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNR---ILVYEYIDNGNLQQWLHGSLGEAKPL 250
E +++ + ++ H N+VKL ++ N +V+E ++ G + + + KPL
Sbjct: 81 EQVYQEIAILKKLDHPNVVKLVE-VLDDPNEDHLYMVFELVNQGPVME-----VPTLKPL 134
Query: 251 TWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA-KLHGPE 309
+ D Q KG+ YLH KI+H ++K SN+L+ + KI+D G++ + G +
Sbjct: 135 SEDQARFYFQDLIKGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD 191
Query: 310 WSISTSCELRNSGYLA-EELSGRTSIFNEKS-DVYSFGILIMEIVSGRLPVDYSQPQVFL 367
+S + + ++A E LS IF+ K+ DV++ G+ + V G+ P +
Sbjct: 192 ALLSNT--VGTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDER----- 244
Query: 368 IDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIAL------RCVDPDIKHRP 416
I L S + Q + + P + E +LK +I L R V P+IK P
Sbjct: 245 IMCLHSKIKSQALEFPDQPDIAE-----DLKDLITRMLDKNPESRIVVPEIKLHP 294
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 55.5 bits (132), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/192 (25%), Positives = 95/192 (49%), Gaps = 21/192 (10%)
Query: 178 MRAAVKLLMSNS-VSEEEDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
++ AVK+L S + E+E + +++ + + +H+N+V L G C G +++ EY G+
Sbjct: 77 LKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGD 136
Query: 236 LQQWL------------HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMK 283
L +L + S + L+ + A+G+A+L +H ++
Sbjct: 137 LLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSSQVAQGMAFLASK---NCIHRDVA 193
Query: 284 SSNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDV 341
+ N+LL + KI D GLA+ ++ + + + L ++A E S ++ +SDV
Sbjct: 194 ARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK-WMAPE-SIFDCVYTVQSDV 251
Query: 342 YSFGILIMEIVS 353
+S+GIL+ EI S
Sbjct: 252 WSYGILLWEIFS 263
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 180 AAVKLLMSNSV-SEEEDFIEKVEAIGQVKHK-NLVKLFGYCVE-GQNRILVYEYIDNGNL 236
AVK+L + SE + +++ + + H N+V L G C + G +++ E+ GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 237 QQWLHGSLGEAKP------------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+L E P LT + + AKG+ +L K +H ++ +
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 176
Query: 285 SNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
NILL KI D GLA+ P++ L E + R ++ +SDV+
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR--VYTIQSDVW 234
Query: 343 SFGILIMEIVS 353
SFG+L+ EI S
Sbjct: 235 SFGVLLWEIFS 245
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 161 IASGDNGVVYRAVLLDNMR-AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
I G G+V A + + + AVK + E +V + +H+N+V+++ +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 98
Query: 220 EGQNRILVYEYIDNGNLQQWL-HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
G +V E+++ G L + H + E + + + L+ LH ++
Sbjct: 99 VGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHAQ---GVI 149
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY-LAEELSGRTSIFNE 337
H ++KS +ILL H K+SD G E + L + Y +A EL R +
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLP-YGP 206
Query: 338 KSDVYSFGILIMEIVSGRLP 357
+ D++S GI+++E+V G P
Sbjct: 207 EVDIWSLGIMVIEMVDGEPP 226
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 37/259 (14%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV--KHKNLVKLFGYC 218
+ G G V+R AVK+ S +E+ + + E V +H+N++
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 219 VEGQNR----ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTR--MKIIQGTAKGLAYLHED 272
+ ++ L+ Y + G+L +L + T DT ++I+ A GLA+LH +
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLT-------TLDTVSCLRIVLSIASGLAHLHIE 124
Query: 273 I-----EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGP---EWSISTSCELRNSGYL 324
I +P I H ++KS NIL+ + I+D+GLA +H + + + + Y+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 325 AEELSGRT---SIFN--EKSDVYSFGILIMEI----VSGRLPVDYSQPQVFLIDWLKSMV 375
A E+ T F+ ++ D+++FG+++ E+ VS + DY P ++ S
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFE 244
Query: 376 AQQKIAYVLDPKLPEMPSR 394
+K+ V D + P +P+R
Sbjct: 245 DMRKVVCV-DQQRPNIPNR 262
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/258 (24%), Positives = 119/258 (46%), Gaps = 33/258 (12%)
Query: 160 VIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV--KHKNLVKLFGY 217
+ G G V+R AVK+ S +E+ + + E V +H+N++
Sbjct: 44 CVGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIAS 99
Query: 218 CVEGQNR----ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
+ ++ L+ Y + G+L +L + L + ++I+ A GLA+LH +I
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYL-----QLTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 274 -----EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGP---EWSISTSCELRNSGYLA 325
+P I H ++KS NIL+ + I+D+GLA +H + + + + Y+A
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYMA 214
Query: 326 EELSGRT---SIFN--EKSDVYSFGILIMEI----VSGRLPVDYSQPQVFLIDWLKSMVA 376
E+ T F+ ++ D+++FG+++ E+ VS + DY P ++ S
Sbjct: 215 PEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFED 274
Query: 377 QQKIAYVLDPKLPEMPSR 394
+K+ V D + P +P+R
Sbjct: 275 MRKVVCV-DQQRPNIPNR 291
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 89/181 (49%), Gaps = 14/181 (7%)
Query: 179 RAAVKLLMSNSVSEE-EDFIEKVEAIGQVKHKNLVKLFGYCVE-GQNRI-LVYEYIDNGN 235
+ AVK L S D +++E + + H+N+VK G C E G N I L+ E++ +G+
Sbjct: 40 QVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGS 99
Query: 236 LQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
L+++L + + ++K KG+ YL + VH ++ + N+L++
Sbjct: 100 LKEYLPKN---KNKINLKQQLKYAVQICKGMDYLGSR---QYVHRDLAARNVLVESEHQV 153
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSG---YLAEELSGRTSIFNEKSDVYSFGILIMEIV 352
KI D GL K + T + R+S Y E L S F SDV+SFG+ + E++
Sbjct: 154 KIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECL--MQSKFYIASDVWSFGVTLHELL 211
Query: 353 S 353
+
Sbjct: 212 T 212
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 180 AAVKLLMSNSV-SEEEDFIEKVEAIGQVKHK-NLVKLFGYCVE-GQNRILVYEYIDNGNL 236
AVK+L + SE + +++ + + H N+V L G C + G +++ E+ GNL
Sbjct: 97 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 156
Query: 237 QQWLHGSLGEAKP------------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+L E P LT + + AKG+ +L K +H ++ +
Sbjct: 157 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 213
Query: 285 SNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
NILL KI D GLA+ P++ L E + R ++ +SDV+
Sbjct: 214 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR--VYTIQSDVW 271
Query: 343 SFGILIMEIVS 353
SFG+L+ EI S
Sbjct: 272 SFGVLLWEIFS 282
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 28/186 (15%)
Query: 180 AAVKLLMSNSVSEEED-FIEKVEAIGQVKHKNLVKLFGYCV-EGQNRI-LVYEYIDNGNL 236
AVK L ++ + + ++++ + + H++++K G C +G+ + LV EY+ G+L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 237 QQWL-HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ +L S+G A+ L + Q +G+AYLH +H N+ + N+LLD+
Sbjct: 106 RDYLPRHSIGLAQLLLF------AQQICEGMAYLHSQ---HYIHRNLAARNVLLDNDRLV 156
Query: 296 KISDVGLAKL--HGPEWSISTSCELRNSG------YLAEELSGRTSIFNEKSDVYSFGIL 347
KI D GLAK G E+ +R G Y E L + F SDV+SFG+
Sbjct: 157 KIGDFGLAKAVPEGHEYY-----RVREDGDSPVFWYAPECL--KEYKFYYASDVWSFGVT 209
Query: 348 IMEIVS 353
+ E+++
Sbjct: 210 LYELLT 215
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 64/259 (24%), Positives = 120/259 (46%), Gaps = 37/259 (14%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV--KHKNLVKLFGYC 218
+ G G V+R AVK+ S +E+ + + E V +H+N++
Sbjct: 16 VGKGRYGEVWRGSW-QGENVAVKIFSSR---DEKSWFRETELYNTVMLRHENILGFIASD 71
Query: 219 VEGQNR----ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTR--MKIIQGTAKGLAYLHED 272
+ ++ L+ Y + G+L +L + T DT ++I+ A GLA+LH +
Sbjct: 72 MTSRHSSTQLWLITHYHEMGSLYDYLQLT-------TLDTVSCLRIVLSIASGLAHLHIE 124
Query: 273 I-----EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGP---EWSISTSCELRNSGYL 324
I +P I H ++KS NIL+ + I+D+GLA +H + + + + Y+
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRVGTKRYM 184
Query: 325 AEELSGRT---SIFN--EKSDVYSFGILIMEI----VSGRLPVDYSQPQVFLIDWLKSMV 375
A E+ T F+ ++ D+++FG+++ E+ VS + DY P ++ S
Sbjct: 185 APEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYDVVPNDPSFE 244
Query: 376 AQQKIAYVLDPKLPEMPSR 394
+K+ V D + P +P+R
Sbjct: 245 DMRKVVCV-DQQRPNIPNR 262
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 161 IASGDNGVVYRAVLLDNMR-AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
I G G+V A + + + AVK + E +V + +H+N+V+++ +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 141
Query: 220 EGQNRILVYEYIDNGNLQQWL-HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
G +V E+++ G L + H + E + + + L+ LH ++
Sbjct: 142 VGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHAQ---GVI 192
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY-LAEELSGRTSIFNE 337
H ++KS +ILL H K+SD G E + L + Y +A EL R +
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLP-YGP 249
Query: 338 KSDVYSFGILIMEIVSGRLP 357
+ D++S GI+++E+V G P
Sbjct: 250 EVDIWSLGIMVIEMVDGEPP 269
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 181 AVKLLMSNSV-SEEEDFIEKVEAIGQVKHK-NLVKLFGYCVE-GQNRILVYEYIDNGNLQ 237
AVK+L + SE + +++ + + H N+V L G C + G +++ E+ GNL
Sbjct: 52 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLS 111
Query: 238 QWLHGSLGEAKP------------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
+L E P LT + + AKG+ +L K +H ++ +
Sbjct: 112 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 168
Query: 286 NILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYS 343
NILL KI D GLA+ P++ L E + R ++ +SDV+S
Sbjct: 169 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR--VYTIQSDVWS 226
Query: 344 FGILIMEIVS 353
FG+L+ EI S
Sbjct: 227 FGVLLWEIFS 236
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHKNLVKLFGYC 218
+ G GVVY+A A+K + ++ E I ++ + ++ H N+V L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKI-IQGTAKGLAYLHEDIEPKI 277
+ LV+E+++ L L E K D+++KI + +G+A+ H+ +I
Sbjct: 89 HSERCLTLVFEFMEKD-----LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RI 140
Query: 278 VHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
+H ++K N+L++ K++D GLA+ G S + E+ Y A ++ + ++
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-SYTHEVVTLWYRAPDVLMGSKKYST 199
Query: 338 KSDVYSFGILIMEIVSGR 355
D++S G + E+++G+
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 85/190 (44%), Gaps = 22/190 (11%)
Query: 181 AVKLLMSNSV-SEEEDFIEKVEAIGQVKHK-NLVKLFGYCVE-GQNRILVYEYIDNGNLQ 237
AVK+L + SE + +++ + + H N+V L G C + G +++ E+ GNL
Sbjct: 63 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 122
Query: 238 QWLHGSLGEAKP------------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
+L E P LT + + AKG+ +L K +H ++ +
Sbjct: 123 TYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 179
Query: 286 NILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYS 343
NILL KI D GLA+ P++ L E + R ++ +SDV+S
Sbjct: 180 NILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR--VYTIQSDVWS 237
Query: 344 FGILIMEIVS 353
FG+L+ EI S
Sbjct: 238 FGVLLWEIFS 247
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 85/191 (44%), Gaps = 22/191 (11%)
Query: 180 AAVKLLMSNSV-SEEEDFIEKVEAIGQVKHK-NLVKLFGYCVE-GQNRILVYEYIDNGNL 236
AVK+L + SE + +++ + + H N+V L G C + G +++ E+ GNL
Sbjct: 51 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNL 110
Query: 237 QQWLHGSLGEAKP------------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+L E P LT + + AKG+ +L K +H ++ +
Sbjct: 111 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 167
Query: 285 SNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
NILL KI D GLA+ P++ L E + R ++ +SDV+
Sbjct: 168 RNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDR--VYTIQSDVW 225
Query: 343 SFGILIMEIVS 353
SFG+L+ EI S
Sbjct: 226 SFGVLLWEIFS 236
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 74/299 (24%), Positives = 130/299 (43%), Gaps = 38/299 (12%)
Query: 143 ISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE--DFIEKV 200
I L+E DI + +I G G VY + A++L+ +E++ F +V
Sbjct: 23 IFLQEWDIPFEQLEIGELIGKGRFGQVYHGRW--HGEVAIRLIDIERDNEDQLKAFKREV 80
Query: 201 EAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAK-PLTWDTRMKII 259
A Q +H+N+V G C+ + ++ L+ + +AK L + +I
Sbjct: 81 MAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRT----LYSVVRDAKIVLDVNKTRQIA 136
Query: 260 QGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELR 319
Q KG+ YLH I+H ++KS N+ D+ I+D GL + G + +LR
Sbjct: 137 QEIVKGMGYLHAK---GILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLR 192
Query: 320 -NSGYLA-------EELSGRTS----IFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFL 367
+G+L +LS T F++ SDV++ G + E+ + P +QP +
Sbjct: 193 IQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFK-TQPAEAI 251
Query: 368 IDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLE 426
I W ++ + P L ++ KE+ I+L C + + RP ++ MLE
Sbjct: 252 I-W--------QMGTGMKPNLSQIGMGKEISDILLF---CWAFEQEERPTFTKLMDMLE 298
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 96/198 (48%), Gaps = 12/198 (6%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHKNLVKLFGYC 218
+ G GVVY+A A+K + ++ E I ++ + ++ H N+V L
Sbjct: 29 VGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI 88
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKI-IQGTAKGLAYLHEDIEPKI 277
+ LV+E+++ L L E K D+++KI + +G+A+ H+ +I
Sbjct: 89 HSERCLTLVFEFMEKD-----LKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQH---RI 140
Query: 278 VHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
+H ++K N+L++ K++D GLA+ G S + E+ Y A ++ + ++
Sbjct: 141 LHRDLKPQNLLINSDGALKLADFGLARAFGIPVR-SYTHEVVTLWYRAPDVLMGSKKYST 199
Query: 338 KSDVYSFGILIMEIVSGR 355
D++S G + E+++G+
Sbjct: 200 SVDIWSIGCIFAEMITGK 217
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 55.1 bits (131), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 161 IASGDNGVVYRAVLLDNMR-AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
I G G+V A + + + AVK + E +V + +H+N+V+++ +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 87
Query: 220 EGQNRILVYEYIDNGNLQQWL-HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
G +V E+++ G L + H + E + + + L+ LH ++
Sbjct: 88 VGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHAQ---GVI 138
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY-LAEELSGRTSIFNE 337
H ++KS +ILL H K+SD G E + L + Y +A EL R +
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLP-YGP 195
Query: 338 KSDVYSFGILIMEIVSGRLP 357
+ D++S GI+++E+V G P
Sbjct: 196 EVDIWSLGIMVIEMVDGEPP 215
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 94/186 (50%), Gaps = 28/186 (15%)
Query: 180 AAVKLLMSNSVSEEED-FIEKVEAIGQVKHKNLVKLFGYCV-EGQNRI-LVYEYIDNGNL 236
AVK L ++ + + ++++ + + H++++K G C +G+ + LV EY+ G+L
Sbjct: 46 VAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSL 105
Query: 237 QQWL-HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP 295
+ +L S+G A+ L + Q +G+AYLH +H N+ + N+LLD+
Sbjct: 106 RDYLPRHSIGLAQLLLF------AQQICEGMAYLHAQ---HYIHRNLAARNVLLDNDRLV 156
Query: 296 KISDVGLAKL--HGPEWSISTSCELRNSG------YLAEELSGRTSIFNEKSDVYSFGIL 347
KI D GLAK G E+ +R G Y E L + F SDV+SFG+
Sbjct: 157 KIGDFGLAKAVPEGHEYY-----RVREDGDSPVFWYAPECL--KEYKFYYASDVWSFGVT 209
Query: 348 IMEIVS 353
+ E+++
Sbjct: 210 LYELLT 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 15/200 (7%)
Query: 161 IASGDNGVVYRAVLLDNMR-AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
I G G+V A + + + AVK + E +V + +H+N+V+++ +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSYL 91
Query: 220 EGQNRILVYEYIDNGNLQQWL-HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
G +V E+++ G L + H + E + + + L+ LH ++
Sbjct: 92 VGDELWVVMEFLEGGALTDIVTHTRMNE------EQIAAVCLAVLQALSVLHAQ---GVI 142
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY-LAEELSGRTSIFNE 337
H ++KS +ILL H K+SD G E + L + Y +A EL R +
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKE--VPRRKXLVGTPYWMAPELISRLP-YGP 199
Query: 338 KSDVYSFGILIMEIVSGRLP 357
+ D++S GI+++E+V G P
Sbjct: 200 EVDIWSLGIMVIEMVDGEPP 219
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 117/251 (46%), Gaps = 21/251 (8%)
Query: 148 IDIVTDGFAEQNVIASGDNGVVYRAV----LLDNMRAAVKLLMSNSVSEEEDFIEKVEAI 203
+++ D F + + + +G+ GVV++ L R + L + ++ + I +++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVL 58
Query: 204 GQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTA 263
+ +V +G + E++D G+L Q L +A + K+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVI 114
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
KGL YL E + KI+H ++K SNIL++ K+ D G++ G + + Y
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSY 169
Query: 324 LA-EELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAY 382
++ E L G + ++ +SD++S G+ ++E+ GR P+ P D M + + Y
Sbjct: 170 MSPERLQG--THYSVQSDIWSMGLSLVEMAVGRYPI---PPPDAKEDSRPPMAIFELLDY 224
Query: 383 VLDPKLPEMPS 393
+++ P++PS
Sbjct: 225 IVNEPPPKLPS 235
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 113/246 (45%), Gaps = 27/246 (10%)
Query: 153 DGFAEQNVIASGDNGVVYRAV----LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKH 208
D F + + + +G+ GVV++ L R + L + ++ + I +++ + +
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNS 82
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAY 268
+V +G + E++D G+L Q L +A + K+ KGL Y
Sbjct: 83 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTY 138
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA-EE 327
L E + KI+H ++K SNIL++ K+ D G++ G + + Y++ E
Sbjct: 139 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPER 193
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPK 387
L G + ++ +SD++S G+ ++E+ GR P+ SM + + Y+++
Sbjct: 194 LQG--THYSVQSDIWSMGLSLVEMAVGRYPIGSGS---------GSMAIFELLDYIVNEP 242
Query: 388 LPEMPS 393
P++PS
Sbjct: 243 PPKLPS 248
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 106/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ A+G
Sbjct: 74 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AEG 126
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D GLAKL G E E G
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAE-----EKEYHAEGGKV 178
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 179 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 218
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 20/189 (10%)
Query: 180 AAVKLLMSNSV-SEEEDFIEKVEAIGQVKHK-NLVKLFGYCVE-GQNRILVYEYIDNGNL 236
AVK+L + SE + +++ + + H N+V L G C + G +++ E+ GNL
Sbjct: 62 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 121
Query: 237 QQWLHGSLGEAKP----------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSN 286
+L E P LT + + AKG+ +L K +H ++ + N
Sbjct: 122 STYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQVAKGMEFLASR---KXIHRDLAARN 178
Query: 287 ILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSF 344
ILL KI D GLA+ P+ L E + R ++ +SDV+SF
Sbjct: 179 ILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR--VYTIQSDVWSF 236
Query: 345 GILIMEIVS 353
G+L+ EI S
Sbjct: 237 GVLLWEIFS 245
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 91/186 (48%), Gaps = 19/186 (10%)
Query: 181 AVKLLMSNSVSEEED----FIEKVEAIGQVKHKNLVKLFGYCVEGQNRI-LVYEYIDNGN 235
A+K+L + V +++D +EK + + + C + +R+ V EY++ G+
Sbjct: 48 AIKILKKDVVIQDDDVECTMVEK-RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGD 106
Query: 236 LQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHW 293
L + G E + + + + I GL +LH+ I++ ++K N++LD
Sbjct: 107 LMYHIQQVGKFKEPQAVFYAAEISI------GLFFLHKR---GIIYRDLKLDNVMLDSEG 157
Query: 294 NPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
+ KI+D G+ K H + ++T Y+A E+ + + D +++G+L+ E+++
Sbjct: 158 HIKIADFGMCKEHMMD-GVTTREFCGTPDYIAPEIIAYQP-YGKSVDWWAYGVLLYEMLA 215
Query: 354 GRLPVD 359
G+ P D
Sbjct: 216 GQPPFD 221
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 149 DIVTDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVK 207
D V D + + +G GVV+R A K +M+ S++E ++++ + ++
Sbjct: 47 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR 106
Query: 208 HKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
H LV L + +++YE++ G L E ++ D ++ ++ KGL
Sbjct: 107 HPTLVNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLC 163
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP--KISDVGLAKLHGPEWSISTSCELRNSGYLA 325
++HE+ VH ++K NI+ + K+ D GL P+ S+ + + + A
Sbjct: 164 HMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAA 218
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
E++ + +D++S G+L ++SG P
Sbjct: 219 PEVAEGKPV-GYYTDMWSVGVLSYILLSGLSP 249
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 30/231 (12%)
Query: 145 LKEIDIVTDGFAEQNVIASGDNGVVYRAVLL------DNMRAAVKLLMSNSVSE-EEDFI 197
LKEI + F E+ + G VY+ L A+K L + E+F
Sbjct: 20 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 77
Query: 198 EKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWL-----HGSLGEA----- 247
+ +++H N+V L G + Q +++ Y +G+L ++L H +G
Sbjct: 78 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 137
Query: 248 --KPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK- 304
L + ++ A G+ YL +VH ++ + N+L+ N KISD+GL +
Sbjct: 138 VKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFRE 194
Query: 305 LHGPEWSISTSCELRNSGYLAEE--LSGRTSIFNEKSDVYSFGILIMEIVS 353
++ ++ L ++A E + G+ SI SD++S+G+++ E+ S
Sbjct: 195 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSI---DSDIWSYGVVLWEVFS 242
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 90/205 (43%), Gaps = 27/205 (13%)
Query: 161 IASGDNGVVYRAVLLDNMR-AAVKLLMSNSVSEEEDFIEKV-----EAIGQVKHKNLVKL 214
I G GVV++ D + A+K + SE++ I+K+ + Q+KH NLV L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLE---SEDDPVIKKIALREIRMLKQLKHPNLVNL 67
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGE----AKPLTWDTRMKIIQGTAKGLAYLH 270
+ LV+EY D+ L + G K +TW T + + + H
Sbjct: 68 LEVFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQ--------TLQAVNFCH 119
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELS 329
+ +H ++K NIL+ H K+ D G A+ L GP S E+ Y + EL
Sbjct: 120 KH---NCIHRDVKPENILITKHSVIKLCDFGFARLLTGP--SDYYDDEVATRWYRSPELL 174
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSG 354
+ + DV++ G + E++SG
Sbjct: 175 VGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 21 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 80
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 81 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 133
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D G AKL G E E G
Sbjct: 134 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE-----EKEYHAEGGKV 185
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 186 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 225
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 21/190 (11%)
Query: 180 AAVKLLMSNSV-SEEEDFIEKVEAIGQVKHK-NLVKLFGYCVE-GQNRILVYEYIDNGNL 236
AVK+L + SE + +++ + + H N+V L G C + G +++ E+ GNL
Sbjct: 61 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 120
Query: 237 QQWLHGSLGEAKP-----------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
+L E P LT + + AKG+ +L K +H ++ +
Sbjct: 121 STYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 177
Query: 286 NILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYS 343
NILL KI D GLA+ P+ L E + R ++ +SDV+S
Sbjct: 178 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR--VYTIQSDVWS 235
Query: 344 FGILIMEIVS 353
FG+L+ EI S
Sbjct: 236 FGVLLWEIFS 245
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D G AKL G E E G
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE-----EKEYHAEGGKV 183
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 184 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/218 (24%), Positives = 100/218 (45%), Gaps = 35/218 (16%)
Query: 155 FAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
F E +I SG G V++A +D +K + N+ E + V+A+ ++ H N+V
Sbjct: 13 FKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKALAKLDHVNIVH 68
Query: 214 LFGYCVEGQNR-----------------ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRM 256
G C +G + + E+ D G L+QW+ GE L +
Sbjct: 69 YNG-CWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE--KLDKVLAL 125
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGL-AKLHGPEWSISTS 315
++ + KG+ Y+H K+++ ++K SNI L KI D GL L +
Sbjct: 126 ELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSK 182
Query: 316 CELRNSGYLA-EELSGRTSIFNEKSDVYSFGILIMEIV 352
LR Y++ E++S + + ++ D+Y+ G+++ E++
Sbjct: 183 GTLR---YMSPEQISSQD--YGKEVDLYALGLILAELL 215
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 79 PHVCRLLGICLTSTVQ-LIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D G AKL G E E G
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE-----EKEYHAEGGKV 183
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 184 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 180 AAVKLLMSNSV-SEEEDFIEKVEAIGQVKHK-NLVKLFGYCVE-GQNRILVYEYIDNGNL 236
AVK+L + SE + +++ + + H N+V L G C + G +++ E+ GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 237 QQWLHGSLGEAKP------------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+L E P LT + + AKG+ +L K +H ++ +
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 176
Query: 285 SNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
NILL KI D GLA+ P+ L E + R ++ +SDV+
Sbjct: 177 RNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR--VYTIQSDVW 234
Query: 343 SFGILIMEIVS 353
SFG+L+ EI S
Sbjct: 235 SFGVLLWEIFS 245
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 19 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 78
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 79 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 131
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D G AKL G E E G
Sbjct: 132 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE-----EKEYHAEGGKV 183
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 184 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 223
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 84/191 (43%), Gaps = 22/191 (11%)
Query: 180 AAVKLLMSNSV-SEEEDFIEKVEAIGQVKHK-NLVKLFGYCVE-GQNRILVYEYIDNGNL 236
AVK+L + SE + +++ + + H N+V L G C + G +++ E+ GNL
Sbjct: 60 VAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNL 119
Query: 237 QQWLHGSLGEAKP------------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+L E P LT + + AKG+ +L K +H ++ +
Sbjct: 120 STYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAA 176
Query: 285 SNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
NILL KI D GLA+ P+ L E + R ++ +SDV+
Sbjct: 177 RNILLSEKNVVKICDFGLARDIYKDPDXVRKGDARLPLKWMAPETIFDR--VYTIQSDVW 234
Query: 343 SFGILIMEIVS 353
SFG+L+ EI S
Sbjct: 235 SFGVLLWEIFS 245
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 17 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 76
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 77 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 129
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D G AKL G E E G
Sbjct: 130 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE-----EKEYHAEGGKV 181
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 182 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 221
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 146 KEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSVSEEEDFIE-KV 200
K+ + + D + ++V+ +G +L ++ R A+K + ++ +E +E ++
Sbjct: 11 KQAEDIRDIYDFRDVLGTG---AFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEI 67
Query: 201 EAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQ 260
+ ++KH N+V L G + L+ + + G L + E T ++I
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIF 123
Query: 261 GTAKGLAYLHEDIEPKIVHHNMKSSNIL---LDHHWNPKISDVGLAKLHGPEWSISTSCE 317
+ YLH+ IVH ++K N+L LD ISD GL+K+ P +ST+C
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC- 179
Query: 318 LRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
GY+A E+ + +++ D +S G++ ++ G P
Sbjct: 180 -GTPGYVAPEVLAQKP-YSKAVDCWSIGVIAYILLCGYPP 217
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 32/221 (14%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-----NMRAAVK-LLMSNSVSEEEDFIEKVEAIGQVKH 208
F + V+ SG G VY+ + + + A+K L + S ++ +++ + V +
Sbjct: 24 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 83
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH---GSLGEAKPLTWDTRMKIIQGTAKG 265
++ +L G C+ + L+ + + G L ++ ++G L W ++ AKG
Sbjct: 84 PHVCRLLGICLTSTVQ-LITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQI------AKG 136
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG--- 322
+ YL + ++VH ++ + N+L+ + KI+D G AKL G E E G
Sbjct: 137 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAE-----EKEYHAEGGKV 188
Query: 323 ---YLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVD 359
++A E S I+ +SDV+S+G+ + E+++ G P D
Sbjct: 189 PIKWMALE-SILHRIYTHQSDVWSYGVTVWELMTFGSKPYD 228
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 166 NGVVYRAVLLDNMRA----AVKLLMSNSVSEEEDFIE-KVEAIGQVKHKNLVKLFGYCVE 220
G +L ++ R A+K + ++ +E +E ++ + ++KH N+V L
Sbjct: 28 TGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYES 87
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
G + L+ + + G L + E T ++I + YLH+ IVH
Sbjct: 88 GGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHR 140
Query: 281 NMKSSNIL---LDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
++K N+L LD ISD GL+K+ P +ST+C GY+A E+ + +++
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC--GTPGYVAPEVLAQKP-YSK 197
Query: 338 KSDVYSFGILIMEIVSGRLP 357
D +S G++ ++ G P
Sbjct: 198 AVDCWSIGVIAYILLCGYPP 217
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 95/212 (44%), Gaps = 19/212 (8%)
Query: 152 TDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKN 210
TDG+ + I G V R + NM AVK++ + E+ IE + GQ H N
Sbjct: 21 TDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPTEE-IEILLRYGQ--HPN 77
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
++ L +G+ +V E + G L + K + ++ K + YLH
Sbjct: 78 IITLKDVYDDGKYVYVVTELMKGGELLD----KILRQKFFSEREASAVLFTITKTVEYLH 133
Query: 271 EDIEPKIVHHNMKSSNIL-LDHHWNP---KISDVGLAK-LHGPEWSISTSCELRNSGYLA 325
+VH ++K SNIL +D NP +I D G AK L + T C N ++A
Sbjct: 134 AQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN--FVA 188
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
E+ R ++ D++S G+L+ +++G P
Sbjct: 189 PEVLERQG-YDAACDIWSLGVLLYTMLTGYTP 219
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 181 AVKLLMSNSV-SEEEDFIEKVEAIGQVKHK-NLVKLFGYCVE-GQNRILVYEYIDNGNLQ 237
AVK+L + SE + +++ + + H N+V L G C + G +++ E+ GNL
Sbjct: 52 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLS 111
Query: 238 QWLHGSLGEAKP------------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
+L E P LT + + AKG+ +L K +H ++ +
Sbjct: 112 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 168
Query: 286 NILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYS 343
NILL KI D GLA+ P+ L E + R ++ +SDV+S
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR--VYTIQSDVWS 226
Query: 344 FGILIMEIVS 353
FG+L+ EI S
Sbjct: 227 FGVLLWEIFS 236
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 103/231 (44%), Gaps = 30/231 (12%)
Query: 145 LKEIDIVTDGFAEQNVIASGDNGVVYRAVLL------DNMRAAVKLLMSNSVSE-EEDFI 197
LKEI + F E+ + G VY+ L A+K L + E+F
Sbjct: 3 LKEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFR 60
Query: 198 EKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWL-----HGSLGEA----- 247
+ +++H N+V L G + Q +++ Y +G+L ++L H +G
Sbjct: 61 HEAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRT 120
Query: 248 --KPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK- 304
L + ++ A G+ YL +VH ++ + N+L+ N KISD+GL +
Sbjct: 121 VKSALEPPDFVHLVAQIAAGMEYLSSH---HVVHKDLATRNVLVYDKLNVKISDLGLFRE 177
Query: 305 LHGPEWSISTSCELRNSGYLAEE--LSGRTSIFNEKSDVYSFGILIMEIVS 353
++ ++ L ++A E + G+ SI SD++S+G+++ E+ S
Sbjct: 178 VYAADYYKLLGNSLLPIRWMAPEAIMYGKFSI---DSDIWSYGVVLWEVFS 225
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 102/220 (46%), Gaps = 21/220 (9%)
Query: 146 KEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSVSEEEDFIE-KV 200
K+ + + D + ++V+ +G +L ++ R A+K + ++ +E +E ++
Sbjct: 11 KQAEDIRDIYDFRDVLGTG---AFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEI 67
Query: 201 EAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQ 260
+ ++KH N+V L G + L+ + + G L + E T ++I
Sbjct: 68 AVLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIF 123
Query: 261 GTAKGLAYLHEDIEPKIVHHNMKSSNIL---LDHHWNPKISDVGLAKLHGPEWSISTSCE 317
+ YLH+ IVH ++K N+L LD ISD GL+K+ P +ST+C
Sbjct: 124 QVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC- 179
Query: 318 LRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
GY+A E+ + +++ D +S G++ ++ G P
Sbjct: 180 -GTPGYVAPEVLAQKP-YSKAVDCWSIGVIAYILLCGYPP 217
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 91/200 (45%), Gaps = 18/200 (9%)
Query: 166 NGVVYRAVLLDNMRA----AVKLLMSNSVSEEEDFIE-KVEAIGQVKHKNLVKLFGYCVE 220
G +L ++ R A+K + ++ +E +E ++ + ++KH N+V L
Sbjct: 28 TGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYES 87
Query: 221 GQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHH 280
G + L+ + + G L + E T ++I + YLH+ IVH
Sbjct: 88 GGHLYLIMQLVSGGEL----FDRIVEKGFYTERDASRLIFQVLDAVKYLHD---LGIVHR 140
Query: 281 NMKSSNIL---LDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNE 337
++K N+L LD ISD GL+K+ P +ST+C GY+A E+ + +++
Sbjct: 141 DLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTAC--GTPGYVAPEVLAQKP-YSK 197
Query: 338 KSDVYSFGILIMEIVSGRLP 357
D +S G++ ++ G P
Sbjct: 198 AVDCWSIGVIAYILLCGYPP 217
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/212 (22%), Positives = 97/212 (45%), Gaps = 12/212 (5%)
Query: 149 DIVTDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVK 207
D V D + + +G GVV+R A K +M+ S++E ++++ + ++
Sbjct: 153 DHVLDHYDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLR 212
Query: 208 HKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
H LV L + +++YE++ G L E ++ D ++ ++ KGL
Sbjct: 213 HPTLVNLHDAFEDDNEMVMIYEFMSGGEL---FEKVADEHNKMSEDEAVEYMRQVCKGLC 269
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP--KISDVGLAKLHGPEWSISTSCELRNSGYLA 325
++HE+ VH ++K NI+ + K+ D GL P+ S+ + + + A
Sbjct: 270 HMHEN---NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT--GTAEFAA 324
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
E++ + +D++S G+L ++SG P
Sbjct: 325 PEVAEGKPV-GYYTDMWSVGVLSYILLSGLSP 355
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/169 (23%), Positives = 83/169 (49%), Gaps = 15/169 (8%)
Query: 189 SVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLG--- 245
S E E+ +V + +KH N+V+ E + +V +Y + G+L + ++ G
Sbjct: 63 SSKEREESRREVAVLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLF 122
Query: 246 -EAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK 304
E + L W ++ + L ++H+ KI+H ++KS NI L ++ D G+A+
Sbjct: 123 QEDQILDWFVQICL------ALKHVHDR---KILHRDIKSQNIFLTKDGTVQLGDFGIAR 173
Query: 305 LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
+ ++ +C + YL+ E+ +N KSD+++ G ++ E+ +
Sbjct: 174 VLNSTVELARAC-IGTPYYLSPEIC-ENKPYNNKSDIWALGCVLYELCT 220
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 84/190 (44%), Gaps = 22/190 (11%)
Query: 181 AVKLLMSNSV-SEEEDFIEKVEAIGQVKHK-NLVKLFGYCVE-GQNRILVYEYIDNGNLQ 237
AVK+L + SE + +++ + + H N+V L G C + G +++ E+ GNL
Sbjct: 52 AVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLS 111
Query: 238 QWLHGSLGEAKP------------LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
+L E P LT + + AKG+ +L K +H ++ +
Sbjct: 112 TYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYSFQVAKGMEFLASR---KCIHRDLAAR 168
Query: 286 NILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYS 343
NILL KI D GLA+ P+ L E + R ++ +SDV+S
Sbjct: 169 NILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLPLKWMAPETIFDR--VYTIQSDVWS 226
Query: 344 FGILIMEIVS 353
FG+L+ EI S
Sbjct: 227 FGVLLWEIFS 236
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 109/243 (44%), Gaps = 28/243 (11%)
Query: 189 SVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE--GQNRILVYEYIDNGNLQQWLHGSLGE 246
S + DF E+ + H N++ + G C + L+ ++ G+L LH G
Sbjct: 47 STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHE--GT 104
Query: 247 AKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLH 306
+ +K A+G+A+LH +EP I H + S ++++D +IS +
Sbjct: 105 NFVVDQSQAVKFALDMARGMAFLHT-LEPLIPRHALNSRSVMIDEDMTARISMADV---- 159
Query: 307 GPEWSISTSCELRNSGYLA-EELSGRTSIFNEKS-DVYSFGILIMEIVSGRLP-VDYSQP 363
++S + + ++A E L + N +S D++SF +L+ E+V+ +P D S
Sbjct: 160 --KFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNM 217
Query: 364 QVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLR 423
++ + VA + + + P + P +L +I C++ D RPK ++
Sbjct: 218 EIGM------KVALEGLRPTIPPGI--SPHVSKLMKI------CMNEDPAKRPKFDMIVP 263
Query: 424 MLE 426
+LE
Sbjct: 264 ILE 266
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 92/200 (46%), Gaps = 15/200 (7%)
Query: 161 IASGDNGVVYRAVLLDNMR-AAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
I G G+V A + R AVK++ E +V + +H N+V+++ +
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSYL 112
Query: 220 EGQNRILVYEYIDNGNLQQWL-HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
G+ ++ E++ G L + L E + T + + + LAYLH ++
Sbjct: 113 VGEELWVLMEFLQGGALTDIVSQVRLNEEQIAT------VCEAVLQALAYLHAQ---GVI 163
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY-LAEELSGRTSIFNE 337
H ++KS +ILL K+SD G + + L + Y +A E+ R S++
Sbjct: 164 HRDIKSDSILLTLDGRVKLSDFGFCAQISKD--VPKRKXLVGTPYWMAPEVISR-SLYAT 220
Query: 338 KSDVYSFGILIMEIVSGRLP 357
+ D++S GI+++E+V G P
Sbjct: 221 EVDIWSLGIMVIEMVDGEPP 240
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 178 MRAAVKLLM-SNSVSEEEDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
M AVK+L S ++E E + +++ + + H N+V L G C G +++ EY G+
Sbjct: 54 MTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 113
Query: 236 LQQWLHGS-----LGEAKPLTWDTRMKIIQG---------TAKGLAYLHEDIEPKIVHHN 281
L +L + P + + AKG+A+L +H +
Sbjct: 114 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRD 170
Query: 282 MKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFN----E 337
+ + NILL H KI D GLA+ + ++ ++ + L + SIFN
Sbjct: 171 LAARNILLTHGRITKICDFGLAR----DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 226
Query: 338 KSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKE 396
+SDV+S+GI + E+ S G P P MP +
Sbjct: 227 ESDVWSYGIFLWELFSLGSSP------------------------------YPGMPVDSK 256
Query: 397 LKRIILIALRCVDPDIKHRP-KMGDVLRMLEPRDLLLREEYR 437
++I R + P+ H P +M D+++ D L R ++
Sbjct: 257 FYKMIKEGFRMLSPE--HAPAEMYDIMKTCWDADPLKRPTFK 296
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 178 MRAAVKLLM-SNSVSEEEDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
M AVK+L S ++E E + +++ + + H N+V L G C G +++ EY G+
Sbjct: 70 MTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 129
Query: 236 LQQWLHGS-----LGEAKPLTWDTRMKIIQG---------TAKGLAYLHEDIEPKIVHHN 281
L +L + P + + AKG+A+L +H +
Sbjct: 130 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRD 186
Query: 282 MKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFN----E 337
+ + NILL H KI D GLA+ + ++ ++ + L + SIFN
Sbjct: 187 LAARNILLTHGRITKICDFGLAR----DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 242
Query: 338 KSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKE 396
+SDV+S+GI + E+ S G P P MP +
Sbjct: 243 ESDVWSYGIFLWELFSLGSSP------------------------------YPGMPVDSK 272
Query: 397 LKRIILIALRCVDPDIKHRP-KMGDVLRMLEPRDLLLREEYR 437
++I R + P+ H P +M D+++ D L R ++
Sbjct: 273 FYKMIKEGFRMLSPE--HAPAEMYDIMKTCWDADPLKRPTFK 312
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 98/202 (48%), Gaps = 20/202 (9%)
Query: 161 IASGDNGVVYR--AVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYC 218
+ G VY+ + L DN+ A ++ + + I +V + +KH N+V L
Sbjct: 10 LGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII 69
Query: 219 VEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK 276
++ LV+EY+D +L+Q+L G++ + ++ + Q +GLAY H K
Sbjct: 70 HTEKSLTLVFEYLDK-DLKQYLDDCGNIINMH----NVKLFLFQ-LLRGLAYCHRQ---K 120
Query: 277 IVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSC---ELRNSGYLAEELSGRTS 333
++H ++K N+L++ K++D GLA+ SI T E+ Y ++ ++
Sbjct: 121 VLHRDLKPQNLLINERGELKLADFGLARAK----SIPTKTYDNEVVTLWYRPPDILLGST 176
Query: 334 IFNEKSDVYSFGILIMEIVSGR 355
++ + D++ G + E+ +GR
Sbjct: 177 DYSTQIDMWGVGCIFYEMATGR 198
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/174 (26%), Positives = 83/174 (47%), Gaps = 14/174 (8%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
E+ ++ + + H N++KLF + + LV E+ + G L + + + K D
Sbjct: 91 EEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI---INRHKFDECD 147
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHH---WNPKISDVGLAKLHGPEW 310
I++ G+ YLH + IVH ++K NILL++ N KI D GL+ ++
Sbjct: 148 A-ANIMKQILSGICYLH---KHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDY 203
Query: 311 SISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQ 364
+ L + Y+A E+ + +NEK DV+S G+++ ++ G P Q
Sbjct: 204 KLRD--RLGTAYYIAPEVLKKK--YNEKCDVWSCGVIMYILLCGYPPFGGQNDQ 253
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 27/166 (16%)
Query: 199 KVEAIGQVKHKNLVKLFGYCV-EGQNRI-LVYEYIDNGNLQQWL-HGSLGEAKPLTWDTR 255
++E + + H+++VK G C +G+ + LV EY+ G+L+ +L +G A+ L +
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF--- 117
Query: 256 MKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSIS 313
Q +G+AYLH +H + + N+LLD+ KI D GLAK G E+
Sbjct: 118 ---AQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY-- 169
Query: 314 TSCELRNSG------YLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
+R G Y E L + F SDV+SFG+ + E+++
Sbjct: 170 ---RVREDGDSPVFWYAPECL--KECKFYYASDVWSFGVTLYELLT 210
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 93/201 (46%), Gaps = 34/201 (16%)
Query: 181 AVKLLMSNSVSEEED--FIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNL-Q 237
A+K++ SVS + +E+V + + H N++KL+ + + +N LV E G L
Sbjct: 66 AIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFD 125
Query: 238 QWLHGSLGEAKPLTWDTRMK--------IIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +H RMK II+ G+ YLH + IVH ++K N+LL
Sbjct: 126 EIIH-------------RMKFNEVDAAVIIKQVLSGVTYLH---KHNIVHRDLKPENLLL 169
Query: 290 DHHWNP---KISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGI 346
+ KI D GL+ + + + L + Y+A E+ + ++EK DV+S G+
Sbjct: 170 ESKEKDALIKIVDFGLSAVFENQKKMKE--RLGTAYYIAPEVLRKK--YDEKCDVWSIGV 225
Query: 347 LIMEIVSGRLPVDYSQPQVFL 367
++ +++G P Q L
Sbjct: 226 ILFILLAGYPPFGGQTDQEIL 246
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 120/271 (44%), Gaps = 32/271 (11%)
Query: 161 IASGDNGVVYRAVLLDN-MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFG-YC 218
+ G G VY+A + AA K++ + S E ED+I ++E + H +VKL G Y
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 86
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+G+ I++ E+ G + + L + LT + + + L +LH +I+
Sbjct: 87 HDGKLWIMI-EFCPGGAVDAIM---LELDRGLTEPQIQVVCRQMLEALNFLHSK---RII 139
Query: 279 HHNMKSSNILLDHHWNPKISDVG-----LAKLHGPEWSISTSCELRNSGYLAEELSGRTS 333
H ++K+ N+L+ + +++D G L L + I T + + E + + +
Sbjct: 140 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM--KDT 197
Query: 334 IFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPS 393
++ K+D++S GI ++E+ P P L+ KS DP PS
Sbjct: 198 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-----------DPPTLLTPS 246
Query: 394 R--KELKRIILIALRCVDPDIKHRPKMGDVL 422
+ E + + IAL D + + RP +L
Sbjct: 247 KWSVEFRDFLKIAL---DKNPETRPSAAQLL 274
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 153 DGFAEQNVIASGDNGVVYRAV----LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKH 208
D F + + + +G+ GVV++ L R + L + ++ + I +++ + +
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNS 125
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAY 268
+V +G + E++D G+L Q L +A + K+ KGL Y
Sbjct: 126 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTY 181
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA-EE 327
L E + KI+H ++K SNIL++ K+ D G++ G + + Y++ E
Sbjct: 182 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPER 236
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLPV 358
L G + ++ +SD++S G+ ++E+ GR P+
Sbjct: 237 LQG--THYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/205 (21%), Positives = 100/205 (48%), Gaps = 12/205 (5%)
Query: 156 AEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
++ ++ G G V++ ++ A K++ + + ++E+ ++ + Q+ H NL++L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
+ + +LV EY+D G L + + E+ LT + ++ +G+ ++H +
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELFDRI---IDESYNLTELDTILFMKQICEGIRHMH---Q 205
Query: 275 PKIVHHNMKSSNILLDHH--WNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K NIL + KI D GLA+ + P + + +LA E+
Sbjct: 206 MYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVN--FGTPEFLAPEVVNYD 263
Query: 333 SIFNEKSDVYSFGILIMEIVSGRLP 357
+ + +D++S G++ ++SG P
Sbjct: 264 FV-SFPTDMWSVGVIAYMLLSGLSP 287
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 83/166 (50%), Gaps = 27/166 (16%)
Query: 199 KVEAIGQVKHKNLVKLFGYCV-EGQNRI-LVYEYIDNGNLQQWL-HGSLGEAKPLTWDTR 255
++E + + H+++VK G C +G+ + LV EY+ G+L+ +L +G A+ L +
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF--- 116
Query: 256 MKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL--HGPEWSIS 313
Q +G+AYLH +H + + N+LLD+ KI D GLAK G E+
Sbjct: 117 ---AQQICEGMAYLHAQ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYY-- 168
Query: 314 TSCELRNSG------YLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
+R G Y E L + F SDV+SFG+ + E+++
Sbjct: 169 ---RVREDGDSPVFWYAPECL--KECKFYYASDVWSFGVTLYELLT 209
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 178 MRAAVKLLM-SNSVSEEEDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
M AVK+L S ++E E + +++ + + H N+V L G C G +++ EY G+
Sbjct: 72 MTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 131
Query: 236 LQQWLHGS-----LGEAKPLTWDTRMKIIQG---------TAKGLAYLHEDIEPKIVHHN 281
L +L + P + + AKG+A+L +H +
Sbjct: 132 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRD 188
Query: 282 MKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFN----E 337
+ + NILL H KI D GLA+ + ++ ++ + L + SIFN
Sbjct: 189 LAARNILLTHGRITKICDFGLAR----DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 244
Query: 338 KSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKE 396
+SDV+S+GI + E+ S G P P MP +
Sbjct: 245 ESDVWSYGIFLWELFSLGSSP------------------------------YPGMPVDSK 274
Query: 397 LKRIILIALRCVDPDIKHRP-KMGDVLRMLEPRDLLLREEYR 437
++I R + P+ H P +M D+++ D L R ++
Sbjct: 275 FYKMIKEGFRMLSPE--HAPAEMYDIMKTCWDADPLKRPTFK 314
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 114/282 (40%), Gaps = 61/282 (21%)
Query: 178 MRAAVKLLM-SNSVSEEEDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
M AVK+L S ++E E + +++ + + H N+V L G C G +++ EY G+
Sbjct: 77 MTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 136
Query: 236 LQQWLHGS-----LGEAKPLTWDTRMKIIQG---------TAKGLAYLHEDIEPKIVHHN 281
L +L + P + + AKG+A+L +H +
Sbjct: 137 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRD 193
Query: 282 MKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFN----E 337
+ + NILL H KI D GLA+ + ++ ++ + L + SIFN
Sbjct: 194 LAARNILLTHGRITKICDFGLAR----DIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 338 KSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKE 396
+SDV+S+GI + E+ S G P P MP +
Sbjct: 250 ESDVWSYGIFLWELFSLGSSP------------------------------YPGMPVDSK 279
Query: 397 LKRIILIALRCVDPDIKHRP-KMGDVLRMLEPRDLLLREEYR 437
++I R + P+ H P +M D+++ D L R ++
Sbjct: 280 FYKMIKEGFRMLSPE--HAPAEMYDIMKTCWDADPLKRPTFK 319
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 109/248 (43%), Gaps = 34/248 (13%)
Query: 144 SLKEIDIVT-----DGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIE 198
SL EID+ F ++ +G G VY+ + + A +M + EEE+ +
Sbjct: 10 SLDEIDLSALRDPAGIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQ 69
Query: 199 KVEAIGQVKH-KNLVKLFGYCVE------GQNRILVYEYIDNGNLQQWLHGSLGEAKPLT 251
++ + + H +N+ +G ++ LV E+ G++ + + G
Sbjct: 70 EINMLKKYSHHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEE 129
Query: 252 WDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWS 311
W I + +GL++LH+ K++H ++K N+LL + K+ D G++
Sbjct: 130 WIAY--ICREILRGLSHLHQH---KVIHRDIKGQNVLLTENAEVKLVDFGVSA------Q 178
Query: 312 ISTSCELRNSG-----YLAEEL----SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ 362
+ + RN+ ++A E+ + ++ KSD++S GI +E+ G P+
Sbjct: 179 LDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMH 238
Query: 363 PQ--VFLI 368
P +FLI
Sbjct: 239 PMRALFLI 246
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 148 IDIVTDGFAEQNVIASGDNGVVYRAV----LLDNMRAAVKLLMSNSVSEEEDFIEKVEAI 203
+++ D F + + + +G+ GVV++ L R + L + ++ + I +++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVL 58
Query: 204 GQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTA 263
+ +V +G + E++D G+L Q L +A + K+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVI 114
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
KGL YL E + KI+H ++K SNIL++ K+ D G++ G + + Y
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSY 169
Query: 324 LA-EELSGRTSIFNEKSDVYSFGILIMEIVSGRLPV 358
++ E L G + ++ +SD++S G+ ++E+ GR P+
Sbjct: 170 MSPERLQG--THYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/215 (24%), Positives = 99/215 (46%), Gaps = 20/215 (9%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEED----FIEKVEAIGQVK 207
D F V+ G G V A + + AVK+L + + +++D EK
Sbjct: 23 DNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARN 82
Query: 208 HKNLVKLFGYCVEGQNRIL-VYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAK 264
H L +LF C + +R+ V E+++ G+L + S EA+ + +
Sbjct: 83 HPFLTQLF-CCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEI------IS 135
Query: 265 GLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYL 324
L +LH+ I++ ++K N+LLDH + K++D G+ K G ++T+ Y+
Sbjct: 136 ALMFLHDK---GIIYRDLKLDNVLLDHEGHCKLADFGMCK-EGICNGVTTATFCGTPDYI 191
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
A E+ + ++ D ++ G+L+ E++ G P +
Sbjct: 192 APEIL-QEMLYGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/211 (23%), Positives = 100/211 (47%), Gaps = 18/211 (8%)
Query: 153 DGFAEQNVIASGDNGVVYRAV----LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKH 208
D F + + + +G+ GVV++ L R + L + ++ + I +++ + +
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNS 90
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAY 268
+V +G + E++D G+L Q L +A + K+ KGL Y
Sbjct: 91 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTY 146
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA-EE 327
L E + KI+H ++K SNIL++ K+ D G++ G + + Y++ E
Sbjct: 147 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSYMSPER 201
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLPV 358
L G + ++ +SD++S G+ ++E+ GR P+
Sbjct: 202 LQG--THYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 148 IDIVTDGFAEQNVIASGDNGVVYRAV----LLDNMRAAVKLLMSNSVSEEEDFIEKVEAI 203
+++ D F + + + +G+ GVV++ L R + L + ++ + I +++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVL 58
Query: 204 GQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTA 263
+ +V +G + E++D G+L Q L +A + K+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVI 114
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
KGL YL E + KI+H ++K SNIL++ K+ D G++ G + + Y
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSY 169
Query: 324 LA-EELSGRTSIFNEKSDVYSFGILIMEIVSGRLPV 358
++ E L G + ++ +SD++S G+ ++E+ GR P+
Sbjct: 170 MSPERLQG--THYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 148 IDIVTDGFAEQNVIASGDNGVVYRAV----LLDNMRAAVKLLMSNSVSEEEDFIEKVEAI 203
+++ D F + + + +G+ GVV++ L R + L + ++ + I +++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVL 58
Query: 204 GQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTA 263
+ +V +G + E++D G+L Q L +A + K+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVI 114
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
KGL YL E + KI+H ++K SNIL++ K+ D G++ G + + Y
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSY 169
Query: 324 LA-EELSGRTSIFNEKSDVYSFGILIMEIVSGRLPV 358
++ E L G + ++ +SD++S G+ ++E+ GR P+
Sbjct: 170 MSPERLQG--THYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 65/271 (23%), Positives = 120/271 (44%), Gaps = 32/271 (11%)
Query: 161 IASGDNGVVYRAVLLDN-MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFG-YC 218
+ G G VY+A + AA K++ + S E ED+I ++E + H +VKL G Y
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYY 78
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
+G+ I++ E+ G + + L + LT + + + L +LH +I+
Sbjct: 79 HDGKLWIMI-EFCPGGAVDAIM---LELDRGLTEPQIQVVCRQMLEALNFLHSK---RII 131
Query: 279 HHNMKSSNILLDHHWNPKISDVG-----LAKLHGPEWSISTSCELRNSGYLAEELSGRTS 333
H ++K+ N+L+ + +++D G L L + I T + + E + + +
Sbjct: 132 HRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETM--KDT 189
Query: 334 IFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPS 393
++ K+D++S GI ++E+ P P L+ KS DP PS
Sbjct: 190 PYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS-----------DPPTLLTPS 238
Query: 394 R--KELKRIILIALRCVDPDIKHRPKMGDVL 422
+ E + + IAL D + + RP +L
Sbjct: 239 KWSVEFRDFLKIAL---DKNPETRPSAAQLL 266
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 148 IDIVTDGFAEQNVIASGDNGVVYRAV----LLDNMRAAVKLLMSNSVSEEEDFIEKVEAI 203
+++ D F + + + +G+ GVV++ L R + L + ++ + I +++ +
Sbjct: 1 MELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVL 58
Query: 204 GQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTA 263
+ +V +G + E++D G+L Q L +A + K+
Sbjct: 59 HECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVI 114
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
KGL YL E + KI+H ++K SNIL++ K+ D G++ G + + Y
Sbjct: 115 KGLTYLRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDSMANSFVGTRSY 169
Query: 324 LA-EELSGRTSIFNEKSDVYSFGILIMEIVSGRLPV 358
++ E L G + ++ +SD++S G+ ++E+ GR P+
Sbjct: 170 MSPERLQG--THYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 199 KVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRM 256
++E + ++ H ++K+ + + ++ +V E ++ G L + G+ L EA + +M
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLAKLHGPEWSIS 313
+ + YLHE+ I+H ++K N+LL KI+D G +K+ G +
Sbjct: 124 LL------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 174
Query: 314 TSCELRNSGYLAEEL--SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWL 371
T C YLA E+ S T+ +N D +S G+++ +SG P + QV L D +
Sbjct: 175 TLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
Query: 372 KS 373
S
Sbjct: 233 TS 234
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 199 KVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRM 256
++E + ++ H ++K+ + + ++ +V E ++ G L + G+ L EA + +M
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLAKLHGPEWSIS 313
+ + YLHE+ I+H ++K N+LL KI+D G +K+ G +
Sbjct: 124 LL------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 174
Query: 314 TSCELRNSGYLAEEL--SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWL 371
T C YLA E+ S T+ +N D +S G+++ +SG P + QV L D +
Sbjct: 175 TLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
Query: 372 KS 373
S
Sbjct: 233 TS 234
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 199 KVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRM 256
++E + ++ H ++K+ + + ++ +V E ++ G L + G+ L EA + +M
Sbjct: 65 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 123
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLAKLHGPEWSIS 313
+ + YLHE+ I+H ++K N+LL KI+D G +K+ G +
Sbjct: 124 LL------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 174
Query: 314 TSCELRNSGYLAEEL--SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWL 371
T C YLA E+ S T+ +N D +S G+++ +SG P + QV L D +
Sbjct: 175 TLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 232
Query: 372 KS 373
S
Sbjct: 233 TS 234
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 199 KVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRM 256
++E + ++ H ++K+ + + ++ +V E ++ G L + G+ L EA + +M
Sbjct: 64 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 122
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLAKLHGPEWSIS 313
+ + YLHE+ I+H ++K N+LL KI+D G +K+ G +
Sbjct: 123 LL------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 173
Query: 314 TSCELRNSGYLAEEL--SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWL 371
T C YLA E+ S T+ +N D +S G+++ +SG P + QV L D +
Sbjct: 174 TLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 231
Query: 372 KS 373
S
Sbjct: 232 TS 233
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/239 (23%), Positives = 111/239 (46%), Gaps = 24/239 (10%)
Query: 139 LGIRISLKE----IDIVTDGFAEQNVIASGDNGVVYRAVLLDN----MRAAVKLLMSNSV 190
LGI LKE + I F ++ G+ G V A L ++ AVK+L ++ +
Sbjct: 5 LGISDELKEKLEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADII 64
Query: 191 --SEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNR------ILVYEYIDNGNLQQWLHG 242
S+ E+F+ + + + H ++ KL G + + + +++ ++ +G+L +L
Sbjct: 65 ASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLA 124
Query: 243 SLGEAKP--LTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDV 300
S P L T ++ + A G+ YL +H ++ + N +L ++D
Sbjct: 125 SRIGENPFNLPLQTLVRFMVDIACGMEYLSSR---NFIHRDLAARNCMLAEDMTVCVADF 181
Query: 301 GLA-KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
GL+ K++ ++ +LA E S +++ SDV++FG+ + EI++ G+ P
Sbjct: 182 GLSRKIYSGDYYRQGCASKLPVKWLALE-SLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 102/216 (47%), Gaps = 22/216 (10%)
Query: 157 EQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVK-HKNLVKL 214
+++V+ G + V + L+ + AVK++ +VE + Q + H+N+++L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
+ E LV+E + G++ +H + + ++Q A L +LH
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIH----KRRHFNELEASVVVQDVASALDFLHNK-- 130
Query: 275 PKIVHHNMKSSNILLDH--HWNP-KISDVGLA---KLHGPEWSISTSCELRNSG---YLA 325
I H ++K NIL +H +P KI D GL KL+G IST L G Y+A
Sbjct: 131 -GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 326 ----EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
E S SI++++ D++S G+++ ++SG P
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 113/282 (40%), Gaps = 61/282 (21%)
Query: 178 MRAAVKLLM-SNSVSEEEDFIEKVEAIGQV-KHKNLVKLFGYCVEGQNRILVYEYIDNGN 235
M AVK+L S ++E E + +++ + + H N+V L G C G +++ EY G+
Sbjct: 77 MTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGD 136
Query: 236 LQQWLHGS-----LGEAKPLTWDTRMKIIQG---------TAKGLAYLHEDIEPKIVHHN 281
L +L + P + + AKG+A+L +H +
Sbjct: 137 LLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASK---NCIHRD 193
Query: 282 MKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFN----E 337
+ + NILL H KI D GLA+ ++ ++ + L + SIFN
Sbjct: 194 LAARNILLTHGRITKICDFGLAR----HIKNDSNYVVKGNARLPVKWMAPESIFNCVYTF 249
Query: 338 KSDVYSFGILIMEIVS-GRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKE 396
+SDV+S+GI + E+ S G P P MP +
Sbjct: 250 ESDVWSYGIFLWELFSLGSSP------------------------------YPGMPVDSK 279
Query: 397 LKRIILIALRCVDPDIKHRP-KMGDVLRMLEPRDLLLREEYR 437
++I R + P+ H P +M D+++ D L R ++
Sbjct: 280 FYKMIKEGFRMLSPE--HAPAEMYDIMKTCWDADPLKRPTFK 319
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 199 KVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRM 256
++E + ++ H ++K+ + + ++ +V E ++ G L + G+ L EA + +M
Sbjct: 71 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 129
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLAKLHGPEWSIS 313
+ + YLHE+ I+H ++K N+LL KI+D G +K+ G +
Sbjct: 130 LL------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 180
Query: 314 TSCELRNSGYLAEEL--SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWL 371
T C YLA E+ S T+ +N D +S G+++ +SG P + QV L D +
Sbjct: 181 TLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 238
Query: 372 KS 373
S
Sbjct: 239 TS 240
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.0 bits (123), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 95/210 (45%), Gaps = 33/210 (15%)
Query: 161 IASGDNGVVYRA--------VLLDNMRAA----VKLLMSNSVSEEEDFIEKVEAIGQVKH 208
I G G VY+A V L ++R + S E + ++EA +H
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAF---EH 73
Query: 209 KNLVKLFGYCVEGQNR-----ILVYEYIDNGNLQQWLHGSLGEAKP--LTWDTRMKIIQG 261
N+V+L C + LV+E++D Q L L +A P L +T +++
Sbjct: 74 PNVVRLMDVCATSRTDREIKVTLVFEHVD-----QDLRTYLDKAPPPGLPAETIKDLMRQ 128
Query: 262 TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS 321
+GL +LH + IVH ++K NIL+ K++D GLA+++ + ++ + +
Sbjct: 129 FLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALTPVVVTL 183
Query: 322 GYLAEELSGRTSIFNEKSDVYSFGILIMEI 351
Y A E+ + S + D++S G + E+
Sbjct: 184 WYRAPEVLLQ-STYATPVDMWSVGCIFAEM 212
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 199 KVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRM 256
++E + ++ H ++K+ + + ++ +V E ++ G L + G+ L EA + +M
Sbjct: 190 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 248
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLAKLHGPEWSIS 313
+ + YLHE+ I+H ++K N+LL KI+D G +K+ G +
Sbjct: 249 LL------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 299
Query: 314 TSCELRNSGYLAEEL--SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWL 371
T C YLA E+ S T+ +N D +S G+++ +SG P + QV L D +
Sbjct: 300 TLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 357
Query: 372 KS 373
S
Sbjct: 358 TS 359
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/208 (21%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEED-------FIEKVEAIGQVKHKNLVK 213
I G G V++A R +++ V ++D + ++ + ++KHKN+V+
Sbjct: 10 IGEGTYGTVFKA----KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
L + LV+E+ D +L+++ G+ P + + KGL + H
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGFCHSR- 120
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSC---ELRNSGYLAEELSG 330
++H ++K N+L++ + K++D GLA+ G I C E+ Y ++
Sbjct: 121 --NVLHRDLKPQNLLINRNGELKLADFGLARAFG----IPVRCYSAEVVTLWYRPPDVLF 174
Query: 331 RTSIFNEKSDVYSFGILIMEIVSGRLPV 358
+++ D++S G + E+ + P+
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 92/180 (51%), Gaps = 18/180 (10%)
Query: 181 AVKLLMSNSVSEEED-FIEKVEAIGQVKHKNLVKLFGYCVEG--QNRILVYEYIDNGNLQ 237
AVK L +++ + + ++++ + + H++++K G C + + LV EY+ G+L+
Sbjct: 64 AVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLR 123
Query: 238 QWL-HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPK 296
+L S+G A+ L + Q +G+AYLH +H ++ + N+LLD+ K
Sbjct: 124 DYLPRHSIGLAQLLLF------AQQICEGMAYLHAQ---HYIHRDLAARNVLLDNDRLVK 174
Query: 297 ISDVGLAKL--HGPE-WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
I D GLAK G E + + + Y E L + F SDV+SFG+ + E+++
Sbjct: 175 IGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECL--KEYKFYYASDVWSFGVTLYELLT 232
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 112/242 (46%), Gaps = 28/242 (11%)
Query: 153 DGFAEQNVIASGDNGVVYRAV----LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKH 208
D F + + + +G+ GVV++ L R + L + ++ + I +++ + +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQ--IIRELQVLHECNS 66
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAY 268
+V +G + E++D G+L Q L +A + K+ KGL Y
Sbjct: 67 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVLK----KAGRIPEQILGKVSIAVIKGLTY 122
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA-EE 327
L E + KI+H ++K SNIL++ K+ D G++ G + + Y++ E
Sbjct: 123 LRE--KHKIMHRDVKPSNILVNSRGEIKLCDFGVS---GQLIDEMANEFVGTRSYMSPER 177
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPK 387
L G + ++ +SD++S G+ ++E+ GR Y +P + + + L +V + PK
Sbjct: 178 LQG--THYSVQSDIWSMGLSLVEMAVGR----YPRPPMAIFELLDYIVNEPP------PK 225
Query: 388 LP 389
LP
Sbjct: 226 LP 227
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 170 YRAVLLDNMRA-----AVKLLMSNSVSEEEDFIEKVEAIGQV-----KHKNLVKLFGYCV 219
Y VLL ++ A+K++ V+++ED I+ V+ V H LV L C
Sbjct: 22 YAKVLLVRLKKTDRIYAMKVVKKELVNDDED-IDWVQTEKHVFEQASNHPFLVGLHS-CF 79
Query: 220 EGQNRIL-VYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK 276
+ ++R+ V EY++ G+L + L E + + + L YLHE
Sbjct: 80 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL------ALNYLHER---G 130
Query: 277 IVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFN 336
I++ ++K N+LLD + K++D G+ K G +TS Y+A E+ R +
Sbjct: 131 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEIL-RGEDYG 188
Query: 337 EKSDVYSFGILIMEIVSGRLPVDY----SQPQVFLIDWLKSMVAQQKI 380
D ++ G+L+ E+++GR P D P D+L ++ +++I
Sbjct: 189 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 236
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/182 (26%), Positives = 88/182 (48%), Gaps = 19/182 (10%)
Query: 199 KVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGS--LGEAKPLTWDTRM 256
++E + ++ H ++K+ + + ++ +V E ++ G L + G+ L EA + +M
Sbjct: 204 EIEILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQM 262
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLAKLHGPEWSIS 313
+ + YLHE+ I+H ++K N+LL KI+D G +K+ G +
Sbjct: 263 LL------AVQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR 313
Query: 314 TSCELRNSGYLAEEL--SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWL 371
T C YLA E+ S T+ +N D +S G+++ +SG P + QV L D +
Sbjct: 314 TLC--GTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQI 371
Query: 372 KS 373
S
Sbjct: 372 TS 373
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 94/208 (45%), Gaps = 19/208 (9%)
Query: 191 SEEEDFIEKVEAIGQVKHKNLVKLFGY---CVEGQNRI-LVYEYIDNGNLQQWL-HGSLG 245
SE + F E+ E + ++H N+V+ + V+G+ I LV E +G L+ +L +
Sbjct: 67 SERQRFKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVX 126
Query: 246 EAKPL-TWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDH-HWNPKISDVGLA 303
+ K L +W ++ KGL +LH P I+H ++K NI + + KI D+GLA
Sbjct: 127 KIKVLRSWCRQI------LKGLQFLHTRT-PPIIHRDLKCDNIFITGPTGSVKIGDLGLA 179
Query: 304 KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
L ++ + + + A E ++E DVY+FG +E + P Q
Sbjct: 180 TLKRASFAKAV---IGTPEFXAPEXYEEK--YDESVDVYAFGXCXLEXATSEYPYSECQN 234
Query: 364 QVFLIDWLKSMVAQQKIAYVLDPKLPEM 391
+ + S V V P++ E+
Sbjct: 235 AAQIYRRVTSGVKPASFDKVAIPEVKEI 262
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 93/211 (44%), Gaps = 19/211 (9%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKHKN 210
F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 39 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 98
Query: 211 LVKLFGYCVEGQNRILV-YEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLA 267
VKL+ +C + ++ Y NG L +++ GS E + + L
Sbjct: 99 FVKLY-FCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALE 151
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLAE 326
YLH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++
Sbjct: 152 YLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSP 208
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
EL S + SD+++ G +I ++V+G P
Sbjct: 209 ELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 238
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 106/228 (46%), Gaps = 30/228 (13%)
Query: 170 YRAVLLDNMRA-----AVKLLMSNSVSEEEDFIEKVEAIGQV-----KHKNLVKLFGYCV 219
Y VLL ++ A+K++ V+++ED I+ V+ V H LV L C
Sbjct: 33 YAKVLLVRLKKTDRIYAMKVVKKELVNDDED-IDWVQTEKHVFEQASNHPFLVGLHS-CF 90
Query: 220 EGQNRIL-VYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK 276
+ ++R+ V EY++ G+L + L E + + + L YLHE
Sbjct: 91 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL------ALNYLHE---RG 141
Query: 277 IVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFN 336
I++ ++K N+LLD + K++D G+ K G +TS Y+A E+ R +
Sbjct: 142 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEIL-RGEDYG 199
Query: 337 EKSDVYSFGILIMEIVSGRLPVDY----SQPQVFLIDWLKSMVAQQKI 380
D ++ G+L+ E+++GR P D P D+L ++ +++I
Sbjct: 200 FSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 247
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 100/231 (43%), Gaps = 48/231 (20%)
Query: 155 FAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
F E +I SG G V++A +D ++ + N+ E + V+A+ ++ H N+V
Sbjct: 14 FKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVH 69
Query: 214 LFGYCVEGQNR------------------------------ILVYEYIDNGNLQQWLHGS 243
G C +G + + E+ D G L+QW+
Sbjct: 70 YNG-CWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKR 128
Query: 244 LGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGL- 302
GE L +++ + KG+ Y+H K++H ++K SNI L KI D GL
Sbjct: 129 RGE--KLDKVLALELFEQITKGVDYIHS---KKLIHRDLKPSNIFLVDTKQVKIGDFGLV 183
Query: 303 AKLHGPEWSISTSCELRNSGYLA-EELSGRTSIFNEKSDVYSFGILIMEIV 352
L + LR Y++ E++S + + ++ D+Y+ G+++ E++
Sbjct: 184 TSLKNDGKRTRSKGTLR---YMSPEQISSQD--YGKEVDLYALGLILAELL 229
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 109/230 (47%), Gaps = 34/230 (14%)
Query: 170 YRAVLLDNMRA-----AVKLLMSNSVSEEEDFIEKVEAIGQV-----KHKNLVKLFGYCV 219
Y VLL ++ A++++ V+++ED I+ V+ V H LV L C
Sbjct: 65 YAKVLLVRLKKTDRIYAMRVVKKELVNDDED-IDWVQTEKHVFEQASNHPFLVGLHS-CF 122
Query: 220 EGQNRIL-VYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK 276
+ ++R+ V EY++ G+L + L E + + + L YLHE
Sbjct: 123 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL------ALNYLHER---G 173
Query: 277 IVHHNMKSSNILLDHHWNPKISDVGLAKLHG--PEWSISTSCELRNSGYLAEELSGRTSI 334
I++ ++K N+LLD + K++D G+ K G P + ST C N Y+A E+ R
Sbjct: 174 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSTFCGTPN--YIAPEIL-RGED 229
Query: 335 FNEKSDVYSFGILIMEIVSGRLPVDY----SQPQVFLIDWLKSMVAQQKI 380
+ D ++ G+L+ E+++GR P D P D+L ++ +++I
Sbjct: 230 YGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI 279
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 96/203 (47%), Gaps = 26/203 (12%)
Query: 170 YRAVLLDNMRA-----AVKLLMSNSVSEEEDFIEKVEAIGQV-----KHKNLVKLFGYCV 219
Y VLL ++ A+K++ V+++ED I+ V+ V H LV L C
Sbjct: 18 YAKVLLVRLKKTDRIYAMKVVKKELVNDDED-IDWVQTEKHVFEQASNHPFLVGLHS-CF 75
Query: 220 EGQNRIL-VYEYIDNGNLQQWLHGS--LGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK 276
+ ++R+ V EY++ G+L + L E + + + L YLHE
Sbjct: 76 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL------ALNYLHER---G 126
Query: 277 IVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFN 336
I++ ++K N+LLD + K++D G+ K G +TS Y+A E+ R +
Sbjct: 127 IIYRDLKLDNVLLDSEGHIKLTDYGMCK-EGLRPGDTTSXFCGTPNYIAPEIL-RGEDYG 184
Query: 337 EKSDVYSFGILIMEIVSGRLPVD 359
D ++ G+L+ E+++GR P D
Sbjct: 185 FSVDWWALGVLMFEMMAGRSPFD 207
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKH 208
+ F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 10 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 69
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGL 266
VKL+ + + Y NG L +++ GS E + + L
Sbjct: 70 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSAL 123
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLA 325
YLH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++
Sbjct: 124 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 180
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
EL S + SD+++ G +I ++V+G P
Sbjct: 181 PELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 211
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 161 IASGDNGVVYR----AVLLDNMRAAVKLLMSNSVSEEE---DFIEKVEAIGQVKHKNLVK 213
+ G GVV R A + AVK L + +S+ E DFI +V A+ + H+NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
L+G + + +V E G+L L G T + A+G+ YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLESK- 130
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS--GYLAEELSGR 331
+ +H ++ + N+LL KI D GL + E R + A E S +
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE-SLK 187
Query: 332 TSIFNEKSDVYSFGILIMEIVS 353
T F+ SD + FG+ + E+ +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 54/93 (58%), Gaps = 6/93 (6%)
Query: 265 GLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYL 324
GL LH + +IV+ ++K NILLD H + +ISD+GLA +H PE + + GY+
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQ-TIKGRVGTVGYM 352
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
A E+ + + D ++ G L+ E+++G+ P
Sbjct: 353 APEVV-KNERYTFSPDWWALGCLLYEMIAGQSP 384
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKH 208
+ F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 9 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 68
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGL 266
VKL+ + + Y NG L +++ GS E + + L
Sbjct: 69 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSAL 122
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLA 325
YLH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++
Sbjct: 123 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 179
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
EL S + SD+++ G +I ++V+G P
Sbjct: 180 PELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 210
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 187 SNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGE 246
+N + +++ + + + Q+ + +V++ G C E ++ +LV E + G L ++L +
Sbjct: 66 ANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ----Q 120
Query: 247 AKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-L 305
+ + ++++ + G+ YL E VH ++ + N+LL KISD GL+K L
Sbjct: 121 NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
Query: 306 HGPE--WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
E + T + Y E ++ F+ KSDV+SFG+L+ E S G+ P
Sbjct: 178 RADENYYKAQTHGKWPVKWYAPECINYYK--FSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 187 SNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGE 246
+N + +++ + + + Q+ + +V++ G C E ++ +LV E + G L ++L +
Sbjct: 66 ANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ----Q 120
Query: 247 AKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-L 305
+ + ++++ + G+ YL E VH ++ + N+LL KISD GL+K L
Sbjct: 121 NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 177
Query: 306 HGPE--WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
E + T + Y E ++ F+ KSDV+SFG+L+ E S G+ P
Sbjct: 178 RADENYYKAQTHGKWPVKWYAPECINYYK--FSSKSDVWSFGVLMWEAFSYGQKP 230
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 96/207 (46%), Gaps = 30/207 (14%)
Query: 161 IASGDNGVVYRA--------VLLDNMRAA-VKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
I G G VY+A V L ++R + + S E + ++EA +H N+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF---EHPNV 68
Query: 212 VKLFGYCVEGQNR-----ILVYEYIDNGNLQQWLHGSLGEAKP--LTWDTRMKIIQGTAK 264
V+L C + LV+E++D Q L L +A P L +T +++ +
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHVD-----QDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 265 GLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYL 324
GL +LH + IVH ++K NIL+ K++D GLA+++ + ++ + + Y
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALAPVVVTLWYR 178
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEI 351
A E+ + S + D++S G + E+
Sbjct: 179 APEVLLQ-STYATPVDMWSVGCIFAEM 204
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 161 IASGDNGVVYR----AVLLDNMRAAVKLLMSNSVSEEE---DFIEKVEAIGQVKHKNLVK 213
+ G GVV R A + AVK L + +S+ E DFI +V A+ + H+NL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
L+G + + +V E G+L L G T + A+G+ YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLESK- 140
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS--GYLAEELSGR 331
+ +H ++ + N+LL KI D GL + E R + A E S +
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPE-SLK 197
Query: 332 TSIFNEKSDVYSFGILIMEIVS 353
T F+ SD + FG+ + E+ +
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFT 219
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 265 GLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYL 324
GL LH + +IV+ ++K NILLD H + +ISD+GLA +H PE + + GY+
Sbjct: 298 GLEDLHRE---RIVYRDLKPENILLDDHGHIRISDLGLA-VHVPEGQ-TIKGRVGTVGYM 352
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQV 365
A E+ + + D ++ G L+ E+++G+ P + ++
Sbjct: 353 APEVV-KNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKI 392
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKH 208
+ F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 8 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 67
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGL 266
VKL+ + + Y NG L +++ GS E + + L
Sbjct: 68 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSAL 121
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLA 325
YLH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++
Sbjct: 122 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 178
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
EL S + SD+++ G +I ++V+G P
Sbjct: 179 PELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 209
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKH 208
+ F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 7 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 66
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGL 266
VKL+ + + Y NG L +++ GS E + + L
Sbjct: 67 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSAL 120
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLA 325
YLH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++
Sbjct: 121 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 177
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
EL S + SD+++ G +I ++V+G P
Sbjct: 178 PELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 208
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 187 SNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGE 246
+N + +++ + + + Q+ + +V++ G C E ++ +LV E + G L ++L +
Sbjct: 64 ANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ----Q 118
Query: 247 AKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-L 305
+ + ++++ + G+ YL E VH ++ + N+LL KISD GL+K L
Sbjct: 119 NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 175
Query: 306 HGPE--WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
E + T + Y E ++ F+ KSDV+SFG+L+ E S G+ P
Sbjct: 176 RADENYYKAQTHGKWPVKWYAPECINYYK--FSSKSDVWSFGVLMWEAFSYGQKP 228
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 16/218 (7%)
Query: 147 EIDIVTDGFAEQNVIASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEED----FIEKVE 201
+I + + F ++ G G V+ A N A+K L + V ++D +EK
Sbjct: 11 QIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 70
Query: 202 AIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQG 261
+H L +F +N V EY++ G+L + +II G
Sbjct: 71 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 130
Query: 262 TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS 321
L +LH IV+ ++K NILLD + KI+D G+ K T+
Sbjct: 131 ----LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK-ENMLGDAKTNXFCGTP 182
Query: 322 GYLAEE-LSGRTSIFNEKSDVYSFGILIMEIVSGRLPV 358
Y+A E L G+ +N D +SFG+L+ E++ G+ P
Sbjct: 183 DYIAPEILLGQK--YNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 187 SNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGE 246
+N + +++ + + + Q+ + +V++ G C E ++ +LV E + G L ++L +
Sbjct: 408 ANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ----Q 462
Query: 247 AKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-L 305
+ + ++++ + G+ YL E VH ++ + N+LL KISD GL+K L
Sbjct: 463 NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 519
Query: 306 HGPE--WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
E + T + Y E ++ F+ KSDV+SFG+L+ E S
Sbjct: 520 RADENYYKAQTHGKWPVKWYAPECIN--YYKFSSKSDVWSFGVLMWEAFS 567
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 161 IASGDNGVVYR----AVLLDNMRAAVKLLMSNSVSEEE---DFIEKVEAIGQVKHKNLVK 213
+ G GVV R A + AVK L + +S+ E DFI +V A+ + H+NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
L+G + + +V E G+L L G T + A+G+ YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLESK- 130
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS--GYLAEELSGR 331
+ +H ++ + N+LL KI D GL + E R + A E S +
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE-SLK 187
Query: 332 TSIFNEKSDVYSFGILIMEIVS 353
T F+ SD + FG+ + E+ +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 187 SNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGE 246
+N + +++ + + + Q+ + +V++ G C E ++ +LV E + G L ++L +
Sbjct: 50 ANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ----Q 104
Query: 247 AKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-L 305
+ + ++++ + G+ YL E VH ++ + N+LL KISD GL+K L
Sbjct: 105 NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
Query: 306 HGPE--WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
E + T + Y E ++ F+ KSDV+SFG+L+ E S G+ P
Sbjct: 162 RADENXYKAQTHGKWPVKWYAPECINYYK--FSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 85/170 (50%), Gaps = 13/170 (7%)
Query: 187 SNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGE 246
+N + +++ + + + Q+ + +V++ G C E ++ +LV E + G L ++L +
Sbjct: 409 ANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ----Q 463
Query: 247 AKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-L 305
+ + ++++ + G+ YL E VH ++ + N+LL KISD GL+K L
Sbjct: 464 NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 520
Query: 306 HGPE--WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
E + T + Y E ++ F+ KSDV+SFG+L+ E S
Sbjct: 521 RADENYYKAQTHGKWPVKWYAPECIN--YYKFSSKSDVWSFGVLMWEAFS 568
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 161 IASGDNGVVYR----AVLLDNMRAAVKLLMSNSVSEEE---DFIEKVEAIGQVKHKNLVK 213
+ G GVV R A + AVK L + +S+ E DFI +V A+ + H+NL++
Sbjct: 26 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 85
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
L+G + + +V E G+L L G T + A+G+ YL
Sbjct: 86 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLESK- 140
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS--GYLAEELSGR 331
+ +H ++ + N+LL KI D GL + E R + A E S +
Sbjct: 141 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE-SLK 197
Query: 332 TSIFNEKSDVYSFGILIMEIVS 353
T F+ SD + FG+ + E+ +
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFT 219
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 91/210 (43%), Gaps = 17/210 (8%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKHKN 210
F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAY 268
VKL+ + + Y NG L +++ GS E + + L Y
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEI------VSALEY 147
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLAEE 327
LH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++ E
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 204
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
L S ++ SD+++ G +I ++V+G P
Sbjct: 205 LLTEKSA-SKSSDLWALGCIIYQLVAGLPP 233
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 187 SNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGE 246
+N + +++ + + + Q+ + +V++ G C E ++ +LV E + G L ++L +
Sbjct: 56 ANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ----Q 110
Query: 247 AKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-L 305
+ + ++++ + G+ YL E VH ++ + N+LL KISD GL+K L
Sbjct: 111 NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 167
Query: 306 HGPE--WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
E + T + Y E ++ F+ KSDV+SFG+L+ E S G+ P
Sbjct: 168 RADENYYKAQTHGKWPVKWYAPECINYYK--FSSKSDVWSFGVLMWEAFSYGQKP 220
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 181 AVKLLMSNSVSEEED--FIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ S ++ + +VE + ++ H N++KLF + + +V E G L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL-- 108
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHH---WNP 295
+ + K + +II+ G+ Y+H+ IVH ++K NILL+ +
Sbjct: 109 --FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDI 163
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
KI D GL+ + + + + Y+A E+ T ++EK DV+S G+++ ++SG
Sbjct: 164 KIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGT 219
Query: 356 LP 357
P
Sbjct: 220 PP 221
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 187 SNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGE 246
+N + +++ + + + Q+ + +V++ G C E ++ +LV E + G L ++L +
Sbjct: 50 ANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ----Q 104
Query: 247 AKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-L 305
+ + ++++ + G+ YL E VH ++ + N+LL KISD GL+K L
Sbjct: 105 NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 161
Query: 306 HGPE--WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
E + T + Y E ++ F+ KSDV+SFG+L+ E S G+ P
Sbjct: 162 RADENYYKAQTHGKWPVKWYAPECINYYK--FSSKSDVWSFGVLMWEAFSYGQKP 214
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 181 AVKLLMSNSVSEEED--FIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ S ++ + +VE + ++ H N++KLF + + +V E G L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL-- 108
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHH---WNP 295
+ + K + +II+ G+ Y+H+ IVH ++K NILL+ +
Sbjct: 109 --FDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NIVHRDLKPENILLESKEKDCDI 163
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
KI D GL+ + + + + Y+A E+ T ++EK DV+S G+++ ++SG
Sbjct: 164 KIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGT 219
Query: 356 LP 357
P
Sbjct: 220 PP 221
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 187 SNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGE 246
+N + +++ + + + Q+ + +V++ G C E ++ +LV E + G L ++L +
Sbjct: 46 ANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ----Q 100
Query: 247 AKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-L 305
+ + ++++ + G+ YL E VH ++ + N+LL KISD GL+K L
Sbjct: 101 NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 157
Query: 306 HGPE--WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
E + T + Y E ++ F+ KSDV+SFG+L+ E S G+ P
Sbjct: 158 RADENYYKAQTHGKWPVKWYAPECINYYK--FSSKSDVWSFGVLMWEAFSYGQKP 210
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/182 (25%), Positives = 88/182 (48%), Gaps = 16/182 (8%)
Query: 181 AVKLLMSNSVSEEED--FIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQ 238
AVK++ S ++ + +VE + ++ H N++KLF + + +V E G L
Sbjct: 51 AVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGEL-- 108
Query: 239 WLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHH---WNP 295
+ + K + +II+ G+ Y+H+ IVH ++K NILL+ +
Sbjct: 109 --FDEIIKRKRFSEHDAARIIKQVFSGITYMHK---HNIVHRDLKPENILLESKEKDCDI 163
Query: 296 KISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
KI D GL+ + + + + Y+A E+ T ++EK DV+S G+++ ++SG
Sbjct: 164 KIIDFGLSTCF--QQNTKMKDRIGTAYYIAPEVLRGT--YDEKCDVWSAGVILYILLSGT 219
Query: 356 LP 357
P
Sbjct: 220 PP 221
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 30/207 (14%)
Query: 161 IASGDNGVVYRA--------VLLDNMRAA-VKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
I G G VY+A V L ++R + + S E + ++EA +H N+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF---EHPNV 68
Query: 212 VKLFGYCVEGQNR-----ILVYEYIDNGNLQQWLHGSLGEAKP--LTWDTRMKIIQGTAK 264
V+L C + LV+E++D Q L L +A P L +T +++ +
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHVD-----QDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 265 GLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYL 324
GL +LH + IVH ++K NIL+ K++D GLA+++ + ++ + Y
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYS--YQMALDPVVVTLWYR 178
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEI 351
A E+ + S + D++S G + E+
Sbjct: 179 APEVLLQ-STYATPVDMWSVGCIFAEM 204
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 161 IASGDNGVVYR----AVLLDNMRAAVKLLMSNSVSEEE---DFIEKVEAIGQVKHKNLVK 213
+ G GVV R A + AVK L + +S+ E DFI +V A+ + H+NL++
Sbjct: 16 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 75
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
L+G + + +V E G+L L G T + A+G+ YL
Sbjct: 76 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLESK- 130
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS--GYLAEELSGR 331
+ +H ++ + N+LL KI D GL + E R + A E S +
Sbjct: 131 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE-SLK 187
Query: 332 TSIFNEKSDVYSFGILIMEIVS 353
T F+ SD + FG+ + E+ +
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFT 209
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 86/200 (43%), Gaps = 15/200 (7%)
Query: 161 IASGDNGVVYRAVLL-DNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV 219
I G G+V A + AVK + E +V + H N+V ++ +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYL 112
Query: 220 EGQNRILVYEYIDNGNLQQWL-HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
G +V E+++ G L + H + E + T + + L+YLH ++
Sbjct: 113 VGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT------VCLSVLRALSYLHNQ---GVI 163
Query: 279 HHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY-LAEELSGRTSIFNE 337
H ++KS +ILL K+SD G E + L + Y +A E+ R +
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKE--VPKRKXLVGTPYWMAPEVISRLP-YGT 220
Query: 338 KSDVYSFGILIMEIVSGRLP 357
+ D++S GI+++E++ G P
Sbjct: 221 EVDIWSLGIMVIEMIDGEPP 240
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 161 IASGDNGVVYR----AVLLDNMRAAVKLLMSNSVSEEE---DFIEKVEAIGQVKHKNLVK 213
+ G GVV R A + AVK L + +S+ E DFI +V A+ + H+NL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
L+G + + +V E G+L L G T + A+G+ YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLESK- 134
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS--GYLAEELSGR 331
+ +H ++ + N+LL KI D GL + E R + A E S +
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE-SLK 191
Query: 332 TSIFNEKSDVYSFGILIMEIVS 353
T F+ SD + FG+ + E+ +
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFT 213
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDN--MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ + VI +G GVVY+A L D+ + A K+L E ++ + ++ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLDHCNIV 76
Query: 213 KL-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+L + + G+ + +VY +Y+ + H S + ++ + Q + L
Sbjct: 77 RLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 135
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYL 324
AY+H I H ++K N+LLD K+ D G AK L E ++S C + Y
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYR 189
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A EL + + DV+S G ++ E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 88/202 (43%), Gaps = 17/202 (8%)
Query: 161 IASGDNGVVYR----AVLLDNMRAAVKLLMSNSVSEEE---DFIEKVEAIGQVKHKNLVK 213
+ G GVV R A + AVK L + +S+ E DFI +V A+ + H+NL++
Sbjct: 20 LGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIR 79
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
L+G + + +V E G+L L G T + A+G+ YL
Sbjct: 80 LYGVVLTPPMK-MVTELAPLGSLLDRLRKHQGH---FLLGTLSRYAVQVAEGMGYLESK- 134
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS--GYLAEELSGR 331
+ +H ++ + N+LL KI D GL + E R + A E S +
Sbjct: 135 --RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPE-SLK 191
Query: 332 TSIFNEKSDVYSFGILIMEIVS 353
T F+ SD + FG+ + E+ +
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFT 213
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F I +G G R +L+ +M A+K+L V + E + + +
Sbjct: 41 DQFERIKTIGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY+ G++ L G E + ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT---- 153
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+L+D K++D G AK + G W + + E
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE----- 203
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 204 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 95/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F I +G G R +L+ +M A+K+L V + E + + +
Sbjct: 41 DQFERIKTIGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY+ G++ L G E + ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLT---- 153
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+L+D K++D G AK + G W + + E
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE----- 203
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 204 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 88/175 (50%), Gaps = 14/175 (8%)
Query: 187 SNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGE 246
+N + +++ + + + Q+ + +V++ G C E ++ +LV E + G L ++L +
Sbjct: 44 ANDPALKDELLAEANVMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQ----Q 98
Query: 247 AKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-L 305
+ + ++++ + G+ YL E VH ++ + N+LL KISD GL+K L
Sbjct: 99 NRHVKDKNIIELVHQVSMGMKYLEES---NFVHRDLAARNVLLVTQHYAKISDFGLSKAL 155
Query: 306 HGPE--WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLP 357
E + T + Y E ++ F+ KSDV+SFG+L+ E S G+ P
Sbjct: 156 RADENYYKAQTHGKWPVKWYAPECINYYK--FSSKSDVWSFGVLMWEAFSYGQKP 208
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F I +G G R +L+ +M A+K+L V + E + + +
Sbjct: 41 DQFERIKTIGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY+ G + L G E + ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT---- 153
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+L+D K++D G AK + G W + + E
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE----- 203
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 204 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKH 208
+ F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGL 266
VKL+ + + Y NG L +++ GS E + + L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSAL 145
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLA 325
YLH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
EL S + SD+++ G +I ++V+G P
Sbjct: 203 PELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 233
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 93/218 (42%), Gaps = 16/218 (7%)
Query: 147 EIDIVTDGFAEQNVIASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEED----FIEKVE 201
+I + + F ++ G G V+ A N A+K L + V ++D +EK
Sbjct: 12 QIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRV 71
Query: 202 AIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQG 261
+H L +F +N V EY++ G+L + +II G
Sbjct: 72 LSLAWEHPFLTHMFCTFQTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILG 131
Query: 262 TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS 321
L +LH IV+ ++K NILLD + KI+D G+ K T+
Sbjct: 132 ----LQFLHSK---GIVYRDLKLDNILLDKDGHIKIADFGMCK-ENMLGDAKTNEFCGTP 183
Query: 322 GYLAEE-LSGRTSIFNEKSDVYSFGILIMEIVSGRLPV 358
Y+A E L G+ +N D +SFG+L+ E++ G+ P
Sbjct: 184 DYIAPEILLGQK--YNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKH 208
+ F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 14 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 73
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGL 266
VKL+ + + Y NG L +++ GS E + + L
Sbjct: 74 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSAL 127
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLA 325
YLH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++
Sbjct: 128 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 184
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
EL S + SD+++ G +I ++V+G P
Sbjct: 185 PELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 215
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKHKN 210
F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAY 268
VKL+ + + Y NG L +++ GS E + + L Y
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEY 148
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLAEE 327
LH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++ E
Sbjct: 149 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPE 205
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
L S + SD+++ G +I ++V+G P
Sbjct: 206 LLTEKSA-CKSSDLWALGCIIYQLVAGLPP 234
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKHKN 210
F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAY 268
VKL+ + + Y NG L +++ GS E + + L Y
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEY 147
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLAEE 327
LH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++ E
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
L S + SD+++ G +I ++V+G P
Sbjct: 205 LLTEKSA-XKSSDLWALGCIIYQLVAGLPP 233
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKH 208
+ F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGL 266
VKL+ + + Y NG L +++ GS E + + L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSAL 143
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLA 325
YLH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++
Sbjct: 144 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
EL S + SD+++ G +I ++V+G P
Sbjct: 201 PELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 231
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKH 208
+ F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGL 266
VKL+ + + Y NG L +++ GS E + + L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSAL 143
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLA 325
YLH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++
Sbjct: 144 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 200
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
EL S + SD+++ G +I ++V+G P
Sbjct: 201 PELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 231
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKH 208
+ F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 32 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 91
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGL 266
VKL+ + + Y NG L +++ GS E + + L
Sbjct: 92 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSAL 145
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLA 325
YLH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++
Sbjct: 146 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 202
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
EL S + SD+++ G +I ++V+G P
Sbjct: 203 PELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 233
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKHKN 210
F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 35 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 94
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAY 268
VKL+ + + Y NG L +++ GS E + + L Y
Sbjct: 95 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEY 148
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLAEE 327
LH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++ E
Sbjct: 149 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 205
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
L S + SD+++ G +I ++V+G P
Sbjct: 206 LLTEKSA-CKSSDLWALGCIIYQLVAGLPP 234
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKH 208
+ F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 30 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 89
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGL 266
VKL+ + + Y NG L +++ GS E + + L
Sbjct: 90 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSAL 143
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLA 325
YLH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++
Sbjct: 144 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVS 200
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
EL S + SD+++ G +I ++V+G P
Sbjct: 201 PELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 231
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/207 (25%), Positives = 95/207 (45%), Gaps = 30/207 (14%)
Query: 161 IASGDNGVVYRA--------VLLDNMRAA-VKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
I G G VY+A V L ++R + + S E + ++EA +H N+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAF---EHPNV 68
Query: 212 VKLFGYCVEGQNR-----ILVYEYIDNGNLQQWLHGSLGEAKP--LTWDTRMKIIQGTAK 264
V+L C + LV+E++D Q L L +A P L +T +++ +
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHVD-----QDLRTYLDKAPPPGLPAETIKDLMRQFLR 123
Query: 265 GLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYL 324
GL +LH + IVH ++K NIL+ K++D GLA+++ + ++ + Y
Sbjct: 124 GLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALFPVVVTLWYR 178
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEI 351
A E+ + S + D++S G + E+
Sbjct: 179 APEVLLQ-STYATPVDMWSVGCIFAEM 204
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKHKN 210
F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAY 268
VKL+ + + Y NG L +++ GS E + + L Y
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEY 147
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLAEE 327
LH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++ E
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
L S + SD+++ G +I ++V+G P
Sbjct: 205 LLTEKSA-CKSSDLWALGCIIYQLVAGLPP 233
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKH 208
+ F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGL 266
VKL+ + + Y NG L +++ GS E + + L
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSAL 142
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLA 325
YLH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++
Sbjct: 143 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVS 199
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
EL S + SD+++ G +I ++V+G P
Sbjct: 200 PELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 230
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKHKN 210
F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 34 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 93
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAY 268
VKL+ + + Y NG L +++ GS E + + L Y
Sbjct: 94 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEY 147
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLAEE 327
LH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++ E
Sbjct: 148 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 204
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
L S + SD+++ G +I ++V+G P
Sbjct: 205 LLTEKSA-CKSSDLWALGCIIYQLVAGLPP 233
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/243 (23%), Positives = 102/243 (41%), Gaps = 28/243 (11%)
Query: 189 SVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE--GQNRILVYEYIDNGNLQQWLHGSLGE 246
S + DF E+ + H N++ + G C + L+ + G+L LH G
Sbjct: 47 STRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGSLYNVLHE--GT 104
Query: 247 AKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLH 306
+ +K A+G A+LH +EP I H + S ++ +D +IS +
Sbjct: 105 NFVVDQSQAVKFALDXARGXAFLHT-LEPLIPRHALNSRSVXIDEDXTARISXADV---- 159
Query: 307 GPEWSISTSCELRNSGYLA-EELSGRTSIFNEKS-DVYSFGILIMEIVSGRLP-VDYSQP 363
++S + ++A E L + N +S D +SF +L+ E+V+ +P D S
Sbjct: 160 --KFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREVPFADLSNX 217
Query: 364 QVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLR 423
++ VA + + + P + P +L +I C + D RPK ++
Sbjct: 218 EI------GXKVALEGLRPTIPPGI--SPHVSKLXKI------CXNEDPAKRPKFDXIVP 263
Query: 424 MLE 426
+LE
Sbjct: 264 ILE 266
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/210 (23%), Positives = 90/210 (42%), Gaps = 17/210 (8%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKHKN 210
F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 37 FKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPF 96
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAY 268
VKL+ + + Y NG L +++ GS E + + L Y
Sbjct: 97 FVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSALEY 150
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLAEE 327
LH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++ E
Sbjct: 151 LHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPE 207
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
L S + SD+++ G +I ++V+G P
Sbjct: 208 LLTEKSA-CKSSDLWALGCIIYQLVAGLPP 236
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 201 EAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKI 258
+ + ++ H VKL+ + + Y NG L +++ GS E + +
Sbjct: 82 DVMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI-- 139
Query: 259 IQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCEL 318
L YLH I+H ++K NILL+ + +I+D G AK+ PE + +
Sbjct: 140 ----VSALEYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXF 192
Query: 319 RNSG-YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ Y++ EL S + SD+++ G +I ++V+G P
Sbjct: 193 VGTAQYVSPELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 231
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 56/216 (25%), Positives = 101/216 (46%), Gaps = 22/216 (10%)
Query: 157 EQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVK-HKNLVKL 214
+++V+ G + V + L+ + AVK++ +VE + Q + H+N+++L
Sbjct: 17 QEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLEL 76
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
+ E LV+E + G++ +H + + ++Q A L +LH
Sbjct: 77 IEFFEEEDRFYLVFEKMRGGSILSHIH----KRRHFNELEASVVVQDVASALDFLHNK-- 130
Query: 275 PKIVHHNMKSSNILLDH--HWNP-KISDVGLA---KLHGPEWSISTSCELRNSG---YLA 325
I H ++K NIL +H +P KI D L KL+G IST L G Y+A
Sbjct: 131 -GIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMA 189
Query: 326 ----EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
E S SI++++ D++S G+++ ++SG P
Sbjct: 190 PEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 91/212 (42%), Gaps = 17/212 (8%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA-AVKLLMSNSVSEEEDF---IEKVEAIGQVKH 208
+ F ++ G V A L R A+K+L + +E + + + ++ H
Sbjct: 29 EDFKFGKILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDH 88
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGL 266
VKL+ + + Y NG L +++ GS E + + L
Sbjct: 89 PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI------VSAL 142
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSG-YLA 325
YLH I+H ++K NILL+ + +I+D G AK+ PE + + + Y++
Sbjct: 143 EYLHGK---GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVS 199
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
EL S + SD+++ G +I ++V+G P
Sbjct: 200 PELLTEKSA-CKSSDLWALGCIIYQLVAGLPP 230
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/208 (20%), Positives = 93/208 (44%), Gaps = 25/208 (12%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEED-------FIEKVEAIGQVKHKNLVK 213
I G G V++A R +++ V ++D + ++ + ++KHKN+V+
Sbjct: 10 IGEGTYGTVFKA----KNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVR 65
Query: 214 LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDI 273
L + LV+E+ D +L+++ G+ P + + KGL + H
Sbjct: 66 LHDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGDLDP---EIVKSFLFQLLKGLGFCHSR- 120
Query: 274 EPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSC---ELRNSGYLAEELSG 330
++H ++K N+L++ + K+++ GLA+ G I C E+ Y ++
Sbjct: 121 --NVLHRDLKPQNLLINRNGELKLANFGLARAFG----IPVRCYSAEVVTLWYRPPDVLF 174
Query: 331 RTSIFNEKSDVYSFGILIMEIVSGRLPV 358
+++ D++S G + E+ + P+
Sbjct: 175 GAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 181 AVKLLMSNSVSEEED----FIEKVEAIGQVKHKNLVKLFGYCVEGQNRI-LVYEYIDNGN 235
AVK+L + V +++D +EK K L +L C + +R+ V EY++ G+
Sbjct: 49 AVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHS-CFQTMDRLYFVMEYVNGGD 107
Query: 236 LQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHW 293
L + G E + + + I GL +L I++ ++K N++LD
Sbjct: 108 LMYHIQQVGRFKEPHAVFYAAEIAI------GLFFLQSK---GIIYRDLKLDNVMLDSEG 158
Query: 294 NPKISDVGLAKLHGPEW-SISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIV 352
+ KI+D G+ K + W ++T Y+A E+ + + D ++FG+L+ E++
Sbjct: 159 HIKIADFGMCKEN--IWDGVTTKXFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEML 215
Query: 353 SGRLPVD 359
+G+ P +
Sbjct: 216 AGQAPFE 222
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 38/220 (17%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDF----IEKVEAIGQVK---HKNLVK 213
I G G V++A L N V L + EE I +V + ++ H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 214 LFGYC-VEGQNR----ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAY 268
LF C V +R LV+E++D +L +L P +T ++ +GL +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT--ETIKDMMFQLLRGLDF 135
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLH----------------GPEW-- 310
LH ++VH ++K NIL+ K++D GLA+++ PE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 311 --SISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILI 348
S +T +L + G + E+ R +F SDV G ++
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 98/211 (46%), Gaps = 21/211 (9%)
Query: 154 GFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVK 213
+ VI +G GVV++A L+++ A+K ++ + + + ++ + VKH N+V
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNRE----LQIMRIVKHPNVVD 96
Query: 214 LFGYCVEGQNRI------LVYEYIDNGNLQQWLH-GSLGEAKPLTWDTRMKIIQGTAKGL 266
L + ++ LV EY+ + H L + P+ ++ + Q + L
Sbjct: 97 LKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLL-IKLYMYQ-LLRSL 154
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYL 324
AY+H I H ++K N+LLD K+ D G AK L E ++S C + Y
Sbjct: 155 AYIHSI---GICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXIC---SRYYR 208
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A EL + + D++S G ++ E++ G+
Sbjct: 209 APELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 62/282 (21%), Positives = 119/282 (42%), Gaps = 31/282 (10%)
Query: 164 GDNGVVYRAV---LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
G+ G Y + L D A+K ++ + + E+ + + H N+++L YC+
Sbjct: 38 GEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLR 97
Query: 221 GQNR----ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPK 276
+ L+ + G L + + LT D + ++ G +GL +H
Sbjct: 98 ERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAK---G 154
Query: 277 IVHHNMKSSNILLDHHWNPKISDVG---LAKLH--GPEWSIST---SCELRNSGYLAEEL 328
H ++K +NILL P + D+G A +H G +++ + + Y A EL
Sbjct: 155 YAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCTISYRAPEL 214
Query: 329 SGRTS--IFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDP 386
S + +E++DV+S G ++ ++ G P D VF ++ Q +++
Sbjct: 215 FSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD----MVFQKGDSVALAVQNQLS----- 265
Query: 387 KLPEMPSRKELKRIILIALRCVDPDIK-HRPKMGDVLRMLEP 427
+P+ P +L ++ VDP + H P + L L+P
Sbjct: 266 -IPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLSQLEALQP 306
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/187 (24%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 181 AVKLLMSNSVSEEED----FIEKVEAIGQVKHKNLVKLFGYCVEGQNRI-LVYEYIDNGN 235
AVK+L + V +++D +EK K L +L C + +R+ V EY++ G+
Sbjct: 370 AVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHS-CFQTMDRLYFVMEYVNGGD 428
Query: 236 LQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHW 293
L + G E + + + I GL +L I++ ++K N++LD
Sbjct: 429 LMYHIQQVGRFKEPHAVFYAAEIAI------GLFFLQSK---GIIYRDLKLDNVMLDSEG 479
Query: 294 NPKISDVGLAKLHGPEW-SISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIV 352
+ KI+D G+ K + W ++T Y+A E+ + + D ++FG+L+ E++
Sbjct: 480 HIKIADFGMCKEN--IWDGVTTKXFCGTPDYIAPEIIAYQP-YGKSVDWWAFGVLLYEML 536
Query: 353 SGRLPVD 359
+G+ P +
Sbjct: 537 AGQAPFE 543
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 36/236 (15%)
Query: 144 SLKEIDI---VTDG--------FAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSN 188
S+KEI I V +G F V+ G G V+ + A A+K+L
Sbjct: 4 SIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA 63
Query: 189 SVSEEEDFIEKVE--AIGQVKHKNLVKL-FGYCVEGQNRILVYEYIDNGNLQQWLHGSLG 245
++ + K+E + +V H +VKL + + EG+ L+ +++ G+L L
Sbjct: 64 TLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDL----FTRLS 118
Query: 246 EAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL 305
+ T + + A L +LH I++ ++K NILLD + K++D GL+K
Sbjct: 119 KEVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175
Query: 306 ----HGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+S + E Y+A E+ R + +D +SFG+L+ E+++G LP
Sbjct: 176 SIDHEKKAYSFCGTVE-----YMAPEVVNRRG-HTQSADWWSFGVLMFEMLTGTLP 225
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 38/220 (17%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDF----IEKVEAIGQVK---HKNLVK 213
I G G V++A L N V L + EE I +V + ++ H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 214 LFGYC-VEGQNR----ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAY 268
LF C V +R LV+E++D +L +L P +T ++ +GL +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT--ETIKDMMFQLLRGLDF 135
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLH----------------GPEW-- 310
LH ++VH ++K NIL+ K++D GLA+++ PE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 311 --SISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILI 348
S +T +L + G + E+ R +F SDV G ++
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 54/216 (25%), Positives = 97/216 (44%), Gaps = 22/216 (10%)
Query: 151 VTDGFAEQNVIASGDNG-VVYRAVLLDNMRAAVKLLMSNSVSEEED---FIEKVEAIGQV 206
++D + + SG G V+ L A+K++ +SV+ + +++V + Q+
Sbjct: 19 LSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL 78
Query: 207 KHKNLVKLFGYCVEGQNRILVYEYIDNGNL--QQWLHGSLGEAKPLTWDTRMKIIQGTAK 264
H N++KL+ + + +N LV E G L + L E I++
Sbjct: 79 DHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV------IMKQVLS 132
Query: 265 GLAYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLAKLHGPEWSISTSCELRNS 321
G YLH+ IVH ++K N+LL+ KI D GL+ E L +
Sbjct: 133 GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTA 187
Query: 322 GYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
Y+A E+ + ++EK DV+S G+++ ++ G P
Sbjct: 188 YYIAPEVLRKK--YDEKCDVWSCGVILYILLCGYPP 221
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V E E + + +
Sbjct: 41 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY G + L G E + ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT---- 153
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+++D K++D GLAK + G W + + E
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPE----- 203
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 204 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 95/220 (43%), Gaps = 38/220 (17%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDF----IEKVEAIGQVK---HKNLVK 213
I G G V++A L N V L + EE I +V + ++ H N+V+
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 214 LFGYC-VEGQNR----ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAY 268
LF C V +R LV+E++D +L +L P +T ++ +GL +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPGVPT--ETIKDMMFQLLRGLDF 135
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLH----------------GPEW-- 310
LH ++VH ++K NIL+ K++D GLA+++ PE
Sbjct: 136 LHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 311 --SISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILI 348
S +T +L + G + E+ R +F SDV G ++
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 232
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V + E + + +
Sbjct: 27 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 83
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY+ G + L G E + ++ +
Sbjct: 84 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT---- 139
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+L+D +++D G AK + G W++ + E
Sbjct: 140 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE----- 189
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 190 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 229
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDN--MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ + VI +G GVVY+A L D+ + A K+L + E ++ + ++ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE-----LQIMRKLDHCNIV 76
Query: 213 KL-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+L + + G+ + VY +Y+ + H S + ++ + Q + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 135
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYL 324
AY+H I H ++K N+LLD K+ D G AK L E ++S C + Y
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYR 189
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A EL + + DV+S G ++ E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDN--MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ + VI +G GVVY+A L D+ + A K+L + E ++ + ++ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE-----LQIMRKLDHCNIV 76
Query: 213 KL-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+L + + G+ + VY +Y+ + H S + ++ + Q + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 135
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYL 324
AY+H I H ++K N+LLD K+ D G AK L E ++S C + Y
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYR 189
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A EL + + DV+S G ++ E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 98/211 (46%), Gaps = 22/211 (10%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDN--MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ + VI +G GVVY+A L D+ + A K+L + E ++ + ++ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNRE-----LQIMRKLDHCNIV 76
Query: 213 KL-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+L + + G+ + VY +Y+ + H S + ++ + Q + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 135
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYL 324
AY+H I H ++K N+LLD K+ D G AK L E ++S C + Y
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYR 189
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A EL + + DV+S G ++ E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/217 (20%), Positives = 97/217 (44%), Gaps = 24/217 (11%)
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHE 271
V +G + + E +D +L ++ + + + + D KI K L +LH
Sbjct: 113 VTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 171
Query: 272 DIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE---- 327
+ ++H ++K SN+L++ K+ D G++ S++ + + Y+A E
Sbjct: 172 KLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVD--SVAKTIDAGCKPYMAPERINP 227
Query: 328 -LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDP 386
L+ + ++ KSD++S GI ++E+ R P D W Q++ V++
Sbjct: 228 ELNQKG--YSVKSDIWSLGITMIELAILRFPYD---------SWGTPF---QQLKQVVEE 273
Query: 387 KLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLR 423
P++P+ K + +C+ + K RP ++++
Sbjct: 274 PSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 310
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 36/240 (15%)
Query: 140 GIRISLKEIDI---VTDG--------FAEQNVIASGDNGVVYRAVLLDNMRA----AVKL 184
G S+KEI I V +G F V+ G G V+ + A A+K+
Sbjct: 1 GAMGSIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKV 60
Query: 185 LMSNSVSEEEDFIEKVE--AIGQVKHKNLVKL-FGYCVEGQNRILVYEYIDNGNLQQWLH 241
L ++ + K+E + +V H +VKL + + EG+ L+ +++ G+L
Sbjct: 61 LKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDL----F 115
Query: 242 GSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVG 301
L + T + + A L +LH I++ ++K NILLD + K++D G
Sbjct: 116 TRLSKEVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFG 172
Query: 302 LAKL----HGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
L+K +S + E Y+A E+ R + +D +SFG+L+ E+++G LP
Sbjct: 173 LSKESIDHEKKAYSFCGTVE-----YMAPEVVNRRG-HTQSADWWSFGVLMFEMLTGTLP 226
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 107/236 (45%), Gaps = 36/236 (15%)
Query: 144 SLKEIDI---VTDG--------FAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSN 188
S+KEI I V +G F V+ G G V+ + A A+K+L
Sbjct: 4 SIKEIAITHHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKA 63
Query: 189 SVSEEEDFIEKVE--AIGQVKHKNLVKL-FGYCVEGQNRILVYEYIDNGNLQQWLHGSLG 245
++ + K+E + +V H +VKL + + EG+ L+ +++ G+L L
Sbjct: 64 TLKVRDRVRTKMERDILVEVNHPFIVKLHYAFQTEGK-LYLILDFLRGGDL----FTRLS 118
Query: 246 EAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL 305
+ T + + A L +LH I++ ++K NILLD + K++D GL+K
Sbjct: 119 KEVMFTEEDVKFYLAELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE 175
Query: 306 ----HGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+S + E Y+A E+ R + +D +SFG+L+ E+++G LP
Sbjct: 176 SIDHEKKAYSFCGTVE-----YMAPEVVNRRG-HTQSADWWSFGVLMFEMLTGTLP 225
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDN--MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ + VI +G GVVY+A L D+ + A K+L E ++ + ++ H N+V
Sbjct: 23 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLDHCNIV 77
Query: 213 KL-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+L + + G+ + VY +Y+ + H S + ++ + Q + L
Sbjct: 78 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 136
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYL 324
AY+H I H ++K N+LLD K+ D G AK L E ++S C + Y
Sbjct: 137 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYR 190
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A EL + + DV+S G ++ E++ G+
Sbjct: 191 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 83/181 (45%), Gaps = 14/181 (7%)
Query: 181 AVKLLMSNSVSEEEDFIE-KVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQW 239
AVK + ++ +E IE ++ + ++KH+N+V L + LV + + G L
Sbjct: 51 AVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGEL--- 107
Query: 240 LHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL---DHHWNPK 296
+ E T +I+ + YLH IVH ++K N+L D
Sbjct: 108 -FDRIVEKGFYTEKDASTLIRQVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIM 163
Query: 297 ISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
ISD GL+K+ G +ST+C GY+A E+ + +++ D +S G++ ++ G
Sbjct: 164 ISDFGLSKMEGKGDVMSTAC--GTPGYVAPEVLAQKP-YSKAVDCWSIGVIAYILLCGYP 220
Query: 357 P 357
P
Sbjct: 221 P 221
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/243 (20%), Positives = 109/243 (44%), Gaps = 33/243 (13%)
Query: 191 SEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPL 250
+E + ++++ + ++H LV L+ + ++ +V + + G+L+ L ++
Sbjct: 57 NEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVH----F 112
Query: 251 TWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEW 310
+T I L YL +I+H +MK NILLD H + I+D +A + E
Sbjct: 113 KEETVKLFICELVMALDYLQNQ---RIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRET 169
Query: 311 SISTSCELRNSGYLAEEL--SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLI 368
I+T + Y+A E+ S + + ++ D +S G+ E++ GR P
Sbjct: 170 QITTMAGTK--PYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYH--------- 218
Query: 369 DWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDP----------DIKHRPKM 418
++S + ++I + + + PS + + L+ + ++P D+++ P M
Sbjct: 219 --IRSSTSSKEIVHTFETTVVTYPSAWSQEMVSLLK-KLLEPNPDQRFSQLSDVQNFPYM 275
Query: 419 GDV 421
D+
Sbjct: 276 NDI 278
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + VKL E+ ++ V L
Sbjct: 72 TGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQ------AVNFPFL 124
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 125 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 178
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W++ + E YLA E+
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPE-----YLAPEI 230
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 231 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 95/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V + E + + +
Sbjct: 42 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY+ G + L G E + ++ +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT---- 154
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+L+D +++D G AK + G W++ + E
Sbjct: 155 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE----- 204
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 205 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATR----WYRAPEIMLNA 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDN--MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ + VI +G GVVY+A L D+ + A K+L E ++ + ++ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLDHCNIV 76
Query: 213 KL-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+L + + G+ + VY +Y+ + H S + ++ + Q + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 135
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYL 324
AY+H I H ++K N+LLD K+ D G AK L E ++S C + Y
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYR 189
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A EL + + DV+S G ++ E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDN--MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ + VI +G GVVY+A L D+ + A K+L E ++ + ++ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLDHCNIV 76
Query: 213 KL-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+L + + G+ + VY +Y+ + H S + ++ + Q + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 135
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYL 324
AY+H I H ++K N+LLD K+ D G AK L E ++S C + Y
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYR 189
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A EL + + DV+S G ++ E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDN--MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ + VI +G GVVY+A L D+ + A K+L E ++ + ++ H N+V
Sbjct: 41 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLDHCNIV 95
Query: 213 KL-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+L + + G+ + VY +Y+ + H S + ++ + Q + L
Sbjct: 96 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 154
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYL 324
AY+H I H ++K N+LLD K+ D G AK L E ++S C + Y
Sbjct: 155 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYR 208
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A EL + + DV+S G ++ E++ G+
Sbjct: 209 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDN--MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ + VI +G GVVY+A L D+ + A K+L E ++ + ++ H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLDHCNIV 88
Query: 213 KL-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+L + + G+ + VY +Y+ + H S + ++ + Q + L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 147
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYL 324
AY+H I H ++K N+LLD K+ D G AK L E ++S C + Y
Sbjct: 148 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYR 201
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A EL + + DV+S G ++ E++ G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDN--MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ + VI +G GVVY+A L D+ + A K+L E ++ + ++ H N+V
Sbjct: 30 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLDHCNIV 84
Query: 213 KL-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+L + + G+ + VY +Y+ + H S + ++ + Q + L
Sbjct: 85 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 143
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYL 324
AY+H I H ++K N+LLD K+ D G AK L E ++S C + Y
Sbjct: 144 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYR 197
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A EL + + DV+S G ++ E++ G+
Sbjct: 198 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 150
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEIMLNW 204
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 150
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEIMLNW 204
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGXVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDN--MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ + VI +G GVVY+A L D+ + A K+L E ++ + ++ H N+V
Sbjct: 26 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLDHCNIV 80
Query: 213 KL-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+L + + G+ + VY +Y+ + H S + ++ + Q + L
Sbjct: 81 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 139
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYL 324
AY+H I H ++K N+LLD K+ D G AK L E ++S C + Y
Sbjct: 140 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYR 193
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A EL + + DV+S G ++ E++ G+
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 150
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTADE----MTGYVATRWYRAPEIMLNW 204
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDN--MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ + VI +G GVVY+A L D+ + A K+L E ++ + ++ H N+V
Sbjct: 34 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLDHCNIV 88
Query: 213 KL-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+L + + G+ + VY +Y+ + H S + ++ + Q + L
Sbjct: 89 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 147
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYL 324
AY+H I H ++K N+LLD K+ D G AK L E ++S C + Y
Sbjct: 148 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYR 201
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A EL + + DV+S G ++ E++ G+
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/275 (21%), Positives = 120/275 (43%), Gaps = 41/275 (14%)
Query: 158 QNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVK--------- 207
++VI G + VV R V AVK++ V+ E E++E + +
Sbjct: 99 KDVIGRGVSSVVRRCVHRATGHEFAVKIM---EVTAERLSPEQLEEVREATRRETHILRQ 155
Query: 208 ---HKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAK 264
H +++ L LV++ + G L +L E L+ I++ +
Sbjct: 156 VAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKETRSIMRSLLE 211
Query: 265 GLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYL 324
+++LH + IVH ++K NILLD + ++SD G + P + C GYL
Sbjct: 212 AVSFLHAN---NIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCG--TPGYL 266
Query: 325 AEELSGRTSI------FNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQ 378
A E+ + S+ + ++ D+++ G+++ +++G P + + Q+ ++ + M Q
Sbjct: 267 APEIL-KCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF-WHRRQILMLRMI--MEGQY 322
Query: 379 KIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIK 413
+ + PE R + ++ L VDP+ +
Sbjct: 323 QFSS------PEWDDRSSTVKDLISRLLQVDPEAR 351
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/221 (23%), Positives = 101/221 (45%), Gaps = 43/221 (19%)
Query: 161 IASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLF---- 215
+ G NG+V+ AV D + R A+K ++ + + +++ I ++ H N+VK+F
Sbjct: 19 LGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILG 78
Query: 216 ----------GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
G E + +V EY++ +L L E PL + + +G
Sbjct: 79 PSGSQLTDDVGSLTELNSVYIVQEYMET-DLANVL-----EQGPLLEEHARLFMYQLLRG 132
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLD-HHWNPKISDVGLAKLHGPEWSISTSCELRNSGYL 324
L Y+H ++H ++K +N+ ++ KI D GLA++ P +S + G+L
Sbjct: 133 LKYIH---SANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYS--------HKGHL 181
Query: 325 AEEL------SGRTSI----FNEKSDVYSFGILIMEIVSGR 355
+E L S R + + + D+++ G + E+++G+
Sbjct: 182 SEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDN--MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ + VI +G GVVY+A L D+ + A K+L E ++ + ++ H N+V
Sbjct: 22 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLDHCNIV 76
Query: 213 KL-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+L + + G+ + VY +Y+ + H S + ++ + Q + L
Sbjct: 77 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 135
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYL 324
AY+H I H ++K N+LLD K+ D G AK L E ++S C + Y
Sbjct: 136 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYR 189
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A EL + + DV+S G ++ E++ G+
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 90/184 (48%), Gaps = 21/184 (11%)
Query: 181 AVKLLMSNSVSEEEDFIEKVE--AIGQVKHKNLVKL-FGYCVEGQNRILVYEYIDNGNLQ 237
A+K+L ++ + K+E + V H +VKL + + EG+ L+ +++ G+L
Sbjct: 60 AMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKLHYAFQTEGK-LYLILDFLRGGDLF 118
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKI 297
L E D + + + A GL +LH I++ ++K NILLD + K+
Sbjct: 119 TRLSK---EVMFTEEDVKFYLAE-LALGLDHLHS---LGIIYRDLKPENILLDEEGHIKL 171
Query: 298 SDVGLAKL----HGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
+D GL+K +S + E Y+A E+ R + +D +S+G+L+ E+++
Sbjct: 172 TDFGLSKEAIDHEKKAYSFCGTVE-----YMAPEVVNRQG-HSHSADWWSYGVLMFEMLT 225
Query: 354 GRLP 357
G LP
Sbjct: 226 GSLP 229
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEK-VEAIGQVKHKNLVK 213
+ + VI +G GVVY+A L D+ +L+ V +++ F + ++ + ++ H N+V+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSG----ELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 111
Query: 214 L-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
L + + G+ + VY +Y+ + H S + ++ + Q + LA
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLA 170
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYLA 325
Y+H I H ++K N+LLD K+ D G AK L E ++S C + Y A
Sbjct: 171 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXIC---SRYYRA 224
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
EL + + DV+S G ++ E++ G+
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 97/211 (45%), Gaps = 22/211 (10%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDN--MRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLV 212
+ + VI +G GVVY+A L D+ + A K+L E ++ + ++ H N+V
Sbjct: 35 YTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRE-----LQIMRKLDHCNIV 89
Query: 213 KL-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+L + + G+ + VY +Y+ + H S + ++ + Q + L
Sbjct: 90 RLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSL 148
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYL 324
AY+H I H ++K N+LLD K+ D G AK L E ++S C + Y
Sbjct: 149 AYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYR 202
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A EL + + DV+S G ++ E++ G+
Sbjct: 203 APELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 71/154 (46%), Gaps = 11/154 (7%)
Query: 205 QVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAK 264
+VKH +V L G L+ EY+ G L L DT + +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE----REGIFMEDTACFYLAEISM 132
Query: 265 GLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSIS-TSCELRNSGY 323
L +LH+ I++ ++K NI+L+H + K++D GL K + +++ T C Y
Sbjct: 133 ALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIE--Y 187
Query: 324 LAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+A E+ R+ N D +S G L+ ++++G P
Sbjct: 188 MAPEILMRSG-HNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/219 (20%), Positives = 100/219 (45%), Gaps = 36/219 (16%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEK----VEAIGQVKHKN 210
+ + I G G+V A D++R + S E + + ++ ++ + + +H+N
Sbjct: 45 YTQLQYIGEGAYGMVSSAY--DHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHEN 102
Query: 211 LVK----LFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
++ L +E + + + + +L + L +++ L+ D + +GL
Sbjct: 103 VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLL-----KSQQLSNDHICYFLYQILRGL 157
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
Y+H ++H ++K SN+L++ + KI D GLA++ PE ++G+L E
Sbjct: 158 KYIHS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHD--------HTGFLTE 206
Query: 327 ELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
++ R + + + D++S G ++ E++S R
Sbjct: 207 XVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V + E + + +
Sbjct: 41 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY+ G + L G E + ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT---- 153
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+L+D +++D G AK + G W + + E
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 204 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V + E + + +
Sbjct: 42 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY+ G + L G E + ++ +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT---- 154
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+L+D +++D G AK + G W + + E
Sbjct: 155 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 204
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 205 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V + E + + +
Sbjct: 41 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY+ G + L G E + ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT---- 153
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+L+D +++D G AK + G W + + E
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 204 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
I SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 202
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 94/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V E E + + +
Sbjct: 41 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQA 97
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY G + L G E + ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT---- 153
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+++D +++D GLAK + G W + + E
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPE----- 203
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 204 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 149
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 203
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V + E + + +
Sbjct: 41 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY+ G + L G E + ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT---- 153
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+L+D +++D G AK + G W + + E
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 204 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 140
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 141 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 194
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGR 217
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 202
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEK-VEAIGQVKHKNLVK 213
+ + VI +G GVVY+A L D+ +L+ V +++ F + ++ + ++ H N+V+
Sbjct: 56 YTDTKVIGNGSFGVVYQAKLCDSG----ELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 111
Query: 214 L-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
L + + G+ + VY +Y+ + H S + ++ + Q + LA
Sbjct: 112 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLA 170
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYLA 325
Y+H I H ++K N+LLD K+ D G AK L E ++S C + Y A
Sbjct: 171 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRA 224
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
EL + + DV+S G ++ E++ G+
Sbjct: 225 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V + E + + +
Sbjct: 41 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY+ G + L G E + ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT---- 153
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+L+D +++D G AK + G W + + E
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 204 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 145
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 199
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDAGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 149 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 202
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 88
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 89 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 142
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 143 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 196
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 197 MHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 86
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 87 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 140
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 141 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 194
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEK-VEAIGQVKHKNLVK 213
+ + VI +G GVVY+A L D+ +L+ V +++ F + ++ + ++ H N+V+
Sbjct: 50 YTDTKVIGNGSFGVVYQAKLCDSG----ELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 105
Query: 214 L-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
L + + G+ + VY +Y+ + H S + ++ + Q + LA
Sbjct: 106 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLA 164
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYLA 325
Y+H I H ++K N+LLD K+ D G AK L E ++S C + Y A
Sbjct: 165 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRA 218
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
EL + + DV+S G ++ E++ G+
Sbjct: 219 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 139
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 193
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 89/201 (44%), Gaps = 21/201 (10%)
Query: 175 LDNMRAAVKLLMSNSVSEEED---FIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYI 231
L A+K++ +SV+ + +++V + Q+ H N++KL+ + + +N LV E
Sbjct: 27 LTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVY 86
Query: 232 DNGNL--QQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
G L + L E I++ G YLH + IVH ++K N+LL
Sbjct: 87 RGGELFDEIILRQKFSEVDAAV------IMKQVLSGTTYLH---KHNIVHRDLKPENLLL 137
Query: 290 DHHWNP---KISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGI 346
+ KI D GL+ E L + Y+A E+ + ++EK DV+S G+
Sbjct: 138 ESKSRDALIKIVDFGLSAHF--EVGGKMKERLGTAYYIAPEVLRKK--YDEKCDVWSCGV 193
Query: 347 LIMEIVSGRLPVDYSQPQVFL 367
++ ++ G P Q L
Sbjct: 194 ILYILLCGYPPFGGQTDQEIL 214
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 145
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 199
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 87
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 88 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 141
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 142 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 195
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGR 218
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 155
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 209
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 96
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 97 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 150
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 151 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 204
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 18/156 (11%)
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAY 268
LVKL + N +V EY+ G + L G E + ++ + Y
Sbjct: 103 LVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEY 156
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEE 327
LH +++ ++K N+L+D +++D G AK + G W ++ + E YLA E
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLAGTPE-----YLAPE 208
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 209 II-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 145
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 146 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 199
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEK-VEAIGQVKHKNLVK 213
+ + VI +G GVVY+A L D+ +L+ V +++ F + ++ + ++ H N+V+
Sbjct: 58 YTDTKVIGNGSFGVVYQAKLCDSG----ELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 113
Query: 214 L-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
L + + G+ + VY +Y+ + H S + ++ + Q + LA
Sbjct: 114 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLA 172
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYLA 325
Y+H I H ++K N+LLD K+ D G AK L E ++S C + Y A
Sbjct: 173 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRA 226
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
EL + + DV+S G ++ E++ G+
Sbjct: 227 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V + E + + +
Sbjct: 41 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY+ G + L G E + ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT---- 153
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+L+D +++D G AK + G W + + E
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 204 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V + E + + +
Sbjct: 42 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY+ G + L G E + ++ +
Sbjct: 99 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT---- 154
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+L+D +++D G AK + G W + + E
Sbjct: 155 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 204
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 205 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 94/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V + E + + +
Sbjct: 41 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY+ G + L G E + ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT---- 153
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+L+D +++D G AK + G W + + E
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 204 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEK-VEAIGQVKHKNLVK 213
+ + VI +G GVVY+A L D+ +L+ V +++ F + ++ + ++ H N+V+
Sbjct: 60 YTDTKVIGNGSFGVVYQAKLCDSG----ELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 115
Query: 214 L-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
L + + G+ + VY +Y+ + H S + ++ + Q + LA
Sbjct: 116 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLA 174
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYLA 325
Y+H I H ++K N+LLD K+ D G AK L E ++S C + Y A
Sbjct: 175 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRA 228
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
EL + + DV+S G ++ E++ G+
Sbjct: 229 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEK-VEAIGQVKHKNLVK 213
+ + VI +G GVVY+A L D+ +L+ V +++ F + ++ + ++ H N+V+
Sbjct: 27 YTDTKVIGNGSFGVVYQAKLCDSG----ELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 82
Query: 214 L-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
L + + G+ + VY +Y+ + H S + ++ + Q + LA
Sbjct: 83 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLA 141
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYLA 325
Y+H I H ++K N+LLD K+ D G AK L E ++S C + Y A
Sbjct: 142 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRA 195
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
EL + + DV+S G ++ E++ G+
Sbjct: 196 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 166
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNW 220
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 155
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 209
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 101
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 102 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 155
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 156 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 209
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 149
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 203
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 28/206 (13%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y A+L N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELV-LMKVVNHKNIIGL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAY 268
E Q+ +V E +D NL Q + L + +M + G+ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSYLLYQMLV------GIKH 141
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEEL 328
LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEV 196
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSG 354
+ E D++S G+++ E++ G
Sbjct: 197 ILGMG-YKENVDIWSVGVIMGEMIKG 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 154
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 155 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 208
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 162
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNW 216
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 92/206 (44%), Gaps = 28/206 (13%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y A+L N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVVAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELV-LMKVVNHKNIIGL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAY 268
E Q+ +V E +D NL Q + L + +M + G+ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSYLLYQMLV------GIKH 141
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEEL 328
LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEV 196
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSG 354
+ E D++S G+++ E++ G
Sbjct: 197 ILGMG-YKENVDIWSVGVIMGEMIKG 221
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDYGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 163
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNW 217
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 103
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLT------FEYL 157
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 210 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 94
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 95 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 148
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 149 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 202
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/210 (25%), Positives = 100/210 (47%), Gaps = 20/210 (9%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEK-VEAIGQVKHKNLVK 213
+ + VI +G GVVY+A L D+ +L+ V +++ F + ++ + ++ H N+V+
Sbjct: 101 YTDTKVIGNGSFGVVYQAKLCDSG----ELVAIKKVLQDKRFKNRELQIMRKLDHCNIVR 156
Query: 214 L-FGYCVEGQNRILVY-----EYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
L + + G+ + VY +Y+ + H S + ++ + Q + LA
Sbjct: 157 LRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQ-LFRSLA 215
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAK-LHGPEWSISTSCELRNSGYLA 325
Y+H I H ++K N+LLD K+ D G AK L E ++S C + Y A
Sbjct: 216 YIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYIC---SRYYRA 269
Query: 326 EELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
EL + + DV+S G ++ E++ G+
Sbjct: 270 PELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 100
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 101 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 154
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 155 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 208
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGR 231
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ + G Y +LD + + ++++E+ + V L
Sbjct: 44 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 96
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 97 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 150
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 151 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 202
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 203 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 103
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 157
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 210 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKXQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDXELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKXQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/204 (23%), Positives = 97/204 (47%), Gaps = 14/204 (6%)
Query: 155 FAEQNVIASGDNGVVYRAVLLD-NMRAAVKLLMSNSVSEEEDFIEK-----VEAIGQVKH 208
+ + + + G VY+A + N A+K + SE +D I + ++ + ++ H
Sbjct: 12 YEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSH 71
Query: 209 KNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAY 268
N++ L N LV+++++ +L+ + + P M + T +GL Y
Sbjct: 72 PNIIGLLDAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLM---TLQGLEY 127
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEEL 328
LH+ I+H ++K +N+LLD + K++D GLAK G + + ++ Y A EL
Sbjct: 128 LHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP-NRAYXHQVVTRWYRAPEL 183
Query: 329 SGRTSIFNEKSDVYSFGILIMEIV 352
++ D+++ G ++ E++
Sbjct: 184 LFGARMYGVGVDMWAVGCILAELL 207
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 103
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 157
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 210 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y AVL N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELV-LMKXVNHKNIISL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ LV E +D NL Q + L RM ++ G+
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHE-------RMSYLLYQMLXGIK 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 141 HLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 195
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMVRHKI 223
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 52 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 104
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 158
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 211 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 103
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 157
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 210 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 103
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 157
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLXGTPE-----YLAPEI 209
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 210 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V + E + + +
Sbjct: 41 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY G + L G E + ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT---- 153
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+++D K++D G AK + G W + + E
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 204 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ + G Y +LD + + ++++E+ + V L
Sbjct: 52 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 104
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 158
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 211 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ + G Y +LD + + ++++E+ + V L
Sbjct: 52 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 104
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 158
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 211 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 89/215 (41%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ + G Y +LD + VKL E+ ++ V L
Sbjct: 72 TGSFGRVMLVKHKETGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQ------AVNFPFL 124
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 125 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 178
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 230
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 231 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 103
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 157
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 210 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 91
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 92 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 145
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 146 --ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 199
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 38 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 90
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 91 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 144
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 145 HS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 196
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 197 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 230
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 149
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 150 --ADIIHRDLKPSNLAVNEDSELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 203
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ + G Y +LD + + ++++E+ + V L
Sbjct: 52 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 104
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 105 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 158
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 159 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 211 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/219 (21%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHE 271
V +G + + E +D +L ++ + + + + D KI K L +LH
Sbjct: 69 VTFYGALFREGDVWICMELMDT-SLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHS 127
Query: 272 DIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAEE-- 327
+ ++H ++K SN+L++ K+ D G++ + I C+ Y+A E
Sbjct: 128 KLS--VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCK----PYMAPERI 181
Query: 328 ---LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
L+ + ++ KSD++S GI ++E+ R P D W Q++ V+
Sbjct: 182 NPELNQKG--YSVKSDIWSLGITMIELAILRFPYD---------SWGTPF---QQLKQVV 227
Query: 385 DPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLR 423
+ P++P+ K + +C+ + K RP ++++
Sbjct: 228 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQ 266
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 46/202 (22%), Positives = 89/202 (44%), Gaps = 18/202 (8%)
Query: 191 SEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPL 250
S+ +DF +++ I +K++ + G ++YEY++N ++ ++ K
Sbjct: 85 SKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNY 144
Query: 251 TWDTRMKIIQGTAKG----LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLH 306
T +++I+ K +Y+H E I H ++K SNIL+D + K+SD G +
Sbjct: 145 TCFIPIQVIKCIIKSVLNSFSYIHN--EKNICHRDVKPSNILMDKNGRVKLSDFGES--- 199
Query: 307 GPEWSISTSCELRNSGYLA---EELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
E+ + + Y E S +S K D++S GI + + +P
Sbjct: 200 --EYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVPFSLKIS 257
Query: 364 QVFLIDWLKSMVAQQKIAYVLD 385
V L + +++ + I Y LD
Sbjct: 258 LVELFNNIRT----KNIEYPLD 275
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 18/156 (11%)
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAY 268
LVKL + N +V EY+ G + L G E + ++ + Y
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEY 156
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEE 327
LH +++ ++K N+L+D +++D G AK + G W + + E YLA E
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPE 208
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 209 II-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDRGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 103
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT------FEYL 157
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 210 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 18/156 (11%)
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAY 268
LVKL + N +V EY+ G + L G E + ++ + Y
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEY 156
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEE 327
LH +++ ++K N+L+D +++D G AK + G W + + E YLA E
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPE 208
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 209 II-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 90/215 (41%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ + G Y +LD + + ++++E+ + V L
Sbjct: 44 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 96
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 97 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLT------FEYL 150
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 151 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 202
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 203 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 236
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 46 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 98
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 99 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT------FEYL 152
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 153 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 204
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 205 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 238
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 18/156 (11%)
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAY 268
LVKL + N +V EY+ G + L G E + ++ + Y
Sbjct: 103 LVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEY 156
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEE 327
LH +++ ++K N+L+D +++D G AK + G W + + E YLA E
Sbjct: 157 LHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPE 208
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 209 II-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 103
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT------FEYL 157
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 210 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 102/226 (45%), Gaps = 29/226 (12%)
Query: 152 TDGFAE----QNVIASGDNGVVYRAVLLDNMRA-AVKLL---MSNSVSEEE------DFI 197
T GF E + ++ G + VV R + + AVK++ S S EE +
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 198 EKVEAIGQVK-HKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRM 256
++V+ + +V H N+++L LV++ + G L +L E L+
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETR 127
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSC 316
KI++ + + LH+ IVH ++K NILLD N K++D G + P + + C
Sbjct: 128 KIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLRSVC 184
Query: 317 ELRNSGYLAEE-----LSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
YLA E ++ + ++ D++S G+++ +++G P
Sbjct: 185 --GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 103
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT------FEYL 157
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 210 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 90/215 (41%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + VKL E+ ++ V L
Sbjct: 72 TGSFGRVMLVKHKESGNHYAMKILDKQKV-VKLKQIEHTLNEKRILQ------AVNFPFL 124
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 125 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT------FEYL 178
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 179 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 230
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 231 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 264
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 93/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V + E + + +
Sbjct: 41 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY G + L G E + ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLT---- 153
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+++D K++D G AK + G W + + E
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 204 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 69/156 (44%), Gaps = 18/156 (11%)
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAY 268
LVKL + N +V EY G + L G E + ++ + Y
Sbjct: 104 LVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEY 157
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEE 327
LH +++ ++K N+L+D K++D G AK + G W + + E YLA E
Sbjct: 158 LHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE-----YLAPE 209
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 210 II-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 9/153 (5%)
Query: 205 QVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAK 264
+VKH +V L G L+ EY+ G L L DT + +
Sbjct: 77 EVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE----REGIFMEDTACFYLAEISM 132
Query: 265 GLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYL 324
L +LH+ I++ ++K NI+L+H + K++D GL K + ++ T Y+
Sbjct: 133 ALGHLHQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTV-THXFCGTIEYM 188
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
A E+ R+ N D +S G L+ ++++G P
Sbjct: 189 APEILMRSG-HNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 23/212 (10%)
Query: 160 VIASGDNGVVYRAVLLDNMRA-----AVKLLMSNSV--SEEEDFI--EKVEAIGQVKHKN 210
VI G G VLL +A AVK+L ++ +EE I E+ + VKH
Sbjct: 45 VIGKGSFG----KVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPF 100
Query: 211 LVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLH 270
LV L V +YI+ G L L +P +I A L YLH
Sbjct: 101 LVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEPRARFYAAEI----ASALGYLH 156
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSG 330
IV+ ++K NILLD + ++D GL K E + +TS YLA E+
Sbjct: 157 SL---NIVYRDLKPENILLDSQGHIVLTDFGLCK-ENIEHNSTTSTFCGTPEYLAPEVLH 212
Query: 331 RTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ 362
+ ++ D + G ++ E++ G LP YS+
Sbjct: 213 KQP-YDRTVDWWCLGAVLYEMLYG-LPPFYSR 242
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDGGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 23/211 (10%)
Query: 155 FAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIE-----KVEAIGQVKHK 209
F V+ SG + V L R KL + + F + ++ + ++KH+
Sbjct: 11 FIFMEVLGSG----AFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHE 66
Query: 210 NLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
N+V L + LV + + G L + E T +IQ + YL
Sbjct: 67 NIVTLEDIYESTTHYYLVMQLVSGGE----LFDRILERGVYTEKDASLVIQQVLSAVKYL 122
Query: 270 HEDIEPKIVHHNMKSSNIL-LDHHWNPK--ISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
HE+ IVH ++K N+L L N K I+D GL+K+ +ST+C GY+A
Sbjct: 123 HEN---GIVHRDLKPENLLYLTPEENSKIMITDFGLSKME-QNGIMSTAC--GTPGYVAP 176
Query: 327 ELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
E+ + +++ D +S G++ ++ G P
Sbjct: 177 EVLAQKP-YSKAVDCWSIGVITYILLCGYPP 206
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 112
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 113 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 166
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + Y A E+
Sbjct: 167 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGYVATRWYRAPEIMLNW 220
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y AVL N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ LV E +D NL Q + L RM ++ G+
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHE-------RMSYLLYQMLXGIK 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 141 HLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 195
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMVRHKI 223
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A R AVK L S+ + ++ + +KH+N++ L
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 95
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 96 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 149
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 150 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 203
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 81/172 (47%), Gaps = 12/172 (6%)
Query: 193 EEDFIEKVEAIGQVKHKNLVKLFG--YCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPL 250
E + ++++ + +++HKN+++L Y E Q +V EY G +Q+ L S+ E +
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLD-SVPEKRFP 107
Query: 251 TWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEW 310
Q GL YLH IVH ++K N+LL KIS +G+A+ P +
Sbjct: 108 VCQAHGYFCQ-LIDGLEYLHSQ---GIVHKDIKPGNLLLTTGGTLKISALGVAEALHP-F 162
Query: 311 SISTSCELRNS--GYLAEELSGRTSIFNE-KSDVYSFGILIMEIVSGRLPVD 359
+ +C + E++ F+ K D++S G+ + I +G P +
Sbjct: 163 AADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFE 214
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 19/184 (10%)
Query: 179 RAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-----GYCVEGQNRILVYEYI 231
R AVK L S+ + ++ + +KH+N++ L +E N + + ++
Sbjct: 45 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 104
Query: 232 DNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDH 291
+L ++ + + LT D +I +GL Y+H I+H ++K SN+ ++
Sbjct: 105 MGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 156
Query: 292 HWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GLA+ E + + Y A E+ +N+ D++S G ++ E+
Sbjct: 157 DCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 352 VSGR 355
++GR
Sbjct: 213 LTGR 216
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y AVL N+ A+K L N + + E V + V HKN++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISL 81
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ LV E +D NL Q + L RM ++ G+
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHE-------RMSYLLYQMLXGIK 133
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 134 HLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 188
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 189 VILGMG-YKENVDIWSVGCIMGEMVRHKI 216
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y AVL N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELV-LMKXVNHKNIISL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ LV E +D NL Q + L RM ++ G+
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQMELDHE-------RMSYLLYQMLCGIK 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 141 HLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 195
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMVRHKI 223
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 19/184 (10%)
Query: 179 RAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-----GYCVEGQNRILVYEYI 231
R AVK L S+ + ++ + +KH+N++ L +E N + + ++
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 232 DNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDH 291
+L ++ + + LT D +I +GL Y+H I+H ++K SN+ ++
Sbjct: 109 MGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 292 HWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GLA+ E + + Y A E+ +N+ D++S G ++ E+
Sbjct: 161 DCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 352 VSGR 355
++GR
Sbjct: 217 LTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A R AVK L S+ + ++ + +KH+N++ L
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 99
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 100 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 153
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 154 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 207
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 208 MHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 189 SVSEEEDFIEK-VEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEA 247
VS EE IE+ V + +++H N++ L + +L+ E + G L + L E
Sbjct: 49 GVSREE--IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDF----LAEK 102
Query: 248 KPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNI-LLDHHW-NPKISDVGLAKL 305
+ LT D + ++ G+ YLH +I H ++K NI LLD + NP+I +
Sbjct: 103 ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 159
Query: 306 HGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
H E ++A E+ + E +D++S G++ ++SG P
Sbjct: 160 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 210
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
ED +V + +++H N++ L + IL+ E + G L + L E + LT +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEE 114
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP----KISDVGLAKLHGPE 309
+ ++ G+ YLH +I H ++K NI+L P KI D GLA H +
Sbjct: 115 EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKID 169
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ ++A E+ + E +D++S G++ ++SG P
Sbjct: 170 FGNEFKNIFGTPAFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 216
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 189 SVSEEEDFIEK-VEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEA 247
VS EE IE+ V + +++H N++ L + +L+ E + G L + L E
Sbjct: 56 GVSREE--IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDF----LAEK 109
Query: 248 KPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNI-LLDHHW-NPKISDVGLAKL 305
+ LT D + ++ G+ YLH +I H ++K NI LLD + NP+I +
Sbjct: 110 ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 166
Query: 306 HGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
H E ++A E+ + E +D++S G++ ++SG P
Sbjct: 167 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 217
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/215 (22%), Positives = 89/215 (41%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ + G Y +LD + + ++++E+ + V L
Sbjct: 52 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 104
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY G + L G E + ++ + YL
Sbjct: 105 VKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 158
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+++D K++D G AK + G W + + E YLA E+
Sbjct: 159 HS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 210
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 211 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 92/207 (44%), Gaps = 30/207 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y A+L N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ +V E +D NL Q + L RM ++ G+
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ E+ Y A E
Sbjct: 141 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTP--EVVTRYYRAPE 195
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSG 354
+ + E D++S G ++ E++ G
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMIKG 221
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 103
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 157
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI ++ +G P QP
Sbjct: 210 I-LSKGYNKAVDWWALGVLIYQMAAGYPPFFADQP 243
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 91/206 (44%), Gaps = 28/206 (13%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y A+L N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELV-LMKVVNHKNIIGL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAY 268
E Q+ +V E +D NL Q + L + +M + G+ +
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHERMSYLLYQMLV------GIKH 141
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEEL 328
LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E+
Sbjct: 142 LHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEV 196
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSG 354
+ E D++S G ++ E++ G
Sbjct: 197 ILGMG-YKENVDIWSVGCIMGEMIKG 221
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 19/184 (10%)
Query: 179 RAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-----GYCVEGQNRILVYEYI 231
R AVK L S+ + ++ + +KH+N++ L +E N + + ++
Sbjct: 45 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 104
Query: 232 DNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDH 291
+L ++ + + LT D +I +GL Y+H I+H ++K SN+ ++
Sbjct: 105 MGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 156
Query: 292 HWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GLA+ E + + Y A E+ +N+ D++S G ++ E+
Sbjct: 157 DCELKILDFGLARHTDDEMAGFVATRW----YRAPEIMLNWMHYNQTVDIWSVGCIMAEL 212
Query: 352 VSGR 355
++GR
Sbjct: 213 LTGR 216
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A R AVK L S+ + ++ + +KH+N++ L
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 108
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 109 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 162
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 163 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNW 216
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 79/172 (45%), Gaps = 13/172 (7%)
Query: 189 SVSEEEDFIEK-VEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEA 247
VS EE IE+ V + +++H N++ L + +L+ E + G L + L E
Sbjct: 70 GVSREE--IEREVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDF----LAEK 123
Query: 248 KPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNI-LLDHHW-NPKISDVGLAKL 305
+ LT D + ++ G+ YLH +I H ++K NI LLD + NP+I +
Sbjct: 124 ESLTEDEATQFLKQILDGVHYLH---SKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIA 180
Query: 306 HGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
H E ++A E+ + E +D++S G++ ++SG P
Sbjct: 181 HKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 231
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 101/226 (44%), Gaps = 29/226 (12%)
Query: 152 TDGFAE----QNVIASGDNGVVYRAVLLDNMRA-AVKLL---MSNSVSEEE------DFI 197
T GF E + ++ G + VV R + + AVK++ S S EE +
Sbjct: 12 THGFYENYEPKEILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATL 71
Query: 198 EKVEAIGQVK-HKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRM 256
++V+ + +V H N+++L LV++ + G L +L E L+
Sbjct: 72 KEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETR 127
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSC 316
KI++ + + LH+ IVH ++K NILLD N K++D G + P + C
Sbjct: 128 KIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVC 184
Query: 317 ELRNSGYLAEE-----LSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
YLA E ++ + ++ D++S G+++ +++G P
Sbjct: 185 --GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A R AVK L S+ + ++ + +KH+N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 163
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRW----YRAPEIMLNW 217
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 90/215 (41%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 103
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 157
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+++D +++D G AK + G W + + E YLA E+
Sbjct: 158 HS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+N+ D ++ G+LI E+ +G P QP
Sbjct: 210 IISKG-YNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/184 (23%), Positives = 84/184 (45%), Gaps = 19/184 (10%)
Query: 179 RAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-----GYCVEGQNRILVYEYI 231
R AVK L S+ + ++ + +KH+N++ L +E N + + ++
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 232 DNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDH 291
+L ++ + + LT D +I +GL Y+H I+H ++K SN+ ++
Sbjct: 109 MGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 292 HWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D GLA+ E + + Y A E+ +N+ D++S G ++ E+
Sbjct: 161 DCELKILDFGLARHTDDEMAGFVATR----WYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 352 VSGR 355
++GR
Sbjct: 217 LTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATR----WYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 91/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ +++ LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKSQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GL + E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 151 VTDGFAEQNVIASGDNGVVYRAVL-LDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVK 207
V D + I +G GVV A L + A+K + + + V+ + + +++ + K
Sbjct: 53 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFK 112
Query: 208 HKNLVKL---FGYCVEGQNRILVYEYID--NGNLQQWLHGSLGEAKPLTWDTRMKIIQGT 262
H N++ + V VY +D +L Q +H S +PLT + +
Sbjct: 113 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS----QPLTLEHVRYFLYQL 168
Query: 263 AKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK---LHGPEWSISTSCELR 319
+GL Y+H +++H ++K SN+L++ + KI D G+A+ E + +
Sbjct: 169 LRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 225
Query: 320 NSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
Y A EL + + D++S G + E+++ R
Sbjct: 226 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 91/215 (42%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 103
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 157
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA E+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPEI 209
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P +P
Sbjct: 210 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADEP 243
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V + E + + +
Sbjct: 42 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V L KL + N +V EY G + L G E + ++ +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT---- 154
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+++D K++D G AK + G W + + E
Sbjct: 155 --FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----- 204
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 205 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 45.1 bits (105), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 93/221 (42%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V + E + + +
Sbjct: 41 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 97
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V LVKL + N +V EY G + L G E + ++ +
Sbjct: 98 VNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT---- 153
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+++D +++D G AK + G W + + E
Sbjct: 154 --FEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----- 203
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 204 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 96/216 (44%), Gaps = 18/216 (8%)
Query: 151 VTDGFAEQNVIASGDNGVVYRAVL-LDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVK 207
V D + I +G GVV A L + A+K + + + V+ + + +++ + K
Sbjct: 52 VGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFK 111
Query: 208 HKNLVKL---FGYCVEGQNRILVYEYID--NGNLQQWLHGSLGEAKPLTWDTRMKIIQGT 262
H N++ + V VY +D +L Q +H S +PLT + +
Sbjct: 112 HDNIIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS----QPLTLEHVRYFLYQL 167
Query: 263 AKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK---LHGPEWSISTSCELR 319
+GL Y+H +++H ++K SN+L++ + KI D G+A+ E + +
Sbjct: 168 LRGLKYMHSA---QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVA 224
Query: 320 NSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
Y A EL + + D++S G + E+++ R
Sbjct: 225 TRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A R AVK L S+ + ++ + +KH+N++ L
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 109
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 110 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 163
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + Y A E+
Sbjct: 164 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MXGXVATRWYRAPEIMLNW 217
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 92/221 (41%), Gaps = 28/221 (12%)
Query: 153 DGFAEQNVIASGDNGVVYRAVLLDNMRA----AVKLLMSNSV---SEEEDFIEKVEAIGQ 205
D F + +G G R +L+ +M A+K+L V + E + + +
Sbjct: 42 DQFERIKTLGTGSFG---RVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQA 98
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTA 263
V L KL + N +V EY G + L G E + ++ +
Sbjct: 99 VNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT---- 154
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSG 322
YLH +++ ++K N+++D K++D G AK + G W + + E
Sbjct: 155 --FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----- 204
Query: 323 YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
YLA E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 205 YLAPEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 89/207 (42%), Gaps = 26/207 (12%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFG 216
I SG G+V A + + AVK L N + + E V + V HKN++ L
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELV-LLKCVNHKNIISLLN 88
Query: 217 YCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLAYL 269
E Q+ LV E +D NL Q +H L RM ++ G+ +L
Sbjct: 89 VFTPQKTLEEFQDVYLVMELMD-ANLCQVIHMELDH-------ERMSYLLYQMLCGIKHL 140
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELS 329
H I+H ++K SNI++ KI D GLA+ + ++ R Y A E+
Sbjct: 141 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRY--YRAPEVI 195
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ E D++S G ++ E+V G +
Sbjct: 196 LGMG-YKENVDIWSVGCIMGELVKGSV 221
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 89/203 (43%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A R AVK L S+ + ++ + +KH+N++ L
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 85
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + LT D +I +GL Y+H
Sbjct: 86 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCAKLTDDHVQFLIYQILRGLKYIHS- 139
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI D GLA+ E + + Y A E+
Sbjct: 140 --ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGYVATRWYRAPEIMLNW 193
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 155 FAEQNVIASGDNGVVYRAVL-LDNMRAAVKLLMSNSVSEEEDFIEK----VEAIGQVKHK 209
+ + I G G+V A L+ +R A+K + S E + + ++ ++ + + +H+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHE 85
Query: 210 NLVKL----FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
N++ + +E + + + + +L + L + + L+ D + +G
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KCQHLSNDHICYFLYQILRG 140
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
L Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+L
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGFLT 189
Query: 326 EELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
E ++ R + + + D++S G ++ E++S R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y A+L N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ +V E +D NL Q + L RM ++ G+
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHE-------RMSYLLYQMLCGIK 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 141 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 195
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSG 354
+ + E D++S G ++ E++ G
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMIKG 221
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 105/227 (46%), Gaps = 35/227 (15%)
Query: 146 KEIDIVTDG---FAEQNVIASGDNG-VVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVE 201
+E +V G F ++V+ G G +VYR + DN AVK ++ S + ++ +
Sbjct: 14 EETSVVIVGKISFCPKDVLGHGAEGTIVYRG-MFDNRDVAVKRILPECFSFADREVQLLR 72
Query: 202 AIGQVKHKNLVKLFGYCVEGQNRILVYEYID--NGNLQQWLH----GSLGEAKPLTWDTR 255
+ H N+++ F C E ++R Y I+ LQ+++ LG +P+T
Sbjct: 73 ESDE--HPNVIRYF--CTE-KDRQFQYIAIELCAATLQEYVEQKDFAHLG-LEPIT---- 122
Query: 256 MKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL---DHHWNPK--ISDVGLA-KLHGPE 309
++Q T GLA+LH IVH ++K NIL+ + H K ISD GL KL
Sbjct: 123 --LLQQTTSGLAHLH---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGR 177
Query: 310 WSISTSCELRNS-GYLAEELSGRTSIFNE--KSDVYSFGILIMEIVS 353
S S + + G++A E+ N D++S G + ++S
Sbjct: 178 HSFSRRSGVPGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVIS 224
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y A+L N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELV-LMKVVNHKNIIGL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ +V E +D NL Q + L RM ++ G+
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHE-------RMSYLLYQMLCGIK 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 141 HLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 195
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSG 354
+ + E D++S G ++ E++ G
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMIKG 221
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 155 FAEQNVIASGDNGVVYRAVL-LDNMRAAVKLLMSNSVSEEEDFIEK----VEAIGQVKHK 209
+ + I G G+V A L+ +R A+K + S E + + ++ ++ + + +H+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHE 86
Query: 210 NLVKL----FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
N++ + +E + + + + +L + L + + L+ D + +G
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRG 141
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
L Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+L
Sbjct: 142 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGFLT 190
Query: 326 EELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
E ++ R + + + D++S G ++ E++S R
Sbjct: 191 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 96/217 (44%), Gaps = 19/217 (8%)
Query: 144 SLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLD----NMRAAVKLLMS-NSVSEEEDFIE 198
S ++ +I + I G G V++ + + M A+K + S S E F++
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 199 KVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKI 258
+ + Q H ++VKL G E I++ E G L+ +L + + + D I
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFL-----QVRKYSLDLASLI 114
Query: 259 IQG--TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTS 315
+ + LAYL + VH ++ + N+L+ + K+ D GL++ + + ++
Sbjct: 115 LYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 316 CELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIV 352
+L E ++ R F SDV+ FG+ + EI+
Sbjct: 172 GKLPIKWMAPESINFRR--FTSASDVWMFGVCMWEIL 206
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 155 FAEQNVIASGDNGVVYRAVL-LDNMRAAVKLLMSNSVSEEEDFIEK----VEAIGQVKHK 209
+ + I G G+V A L+ +R A+K + S E + + ++ ++ + + +H+
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHE 87
Query: 210 NLVKL----FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
N++ + +E + + + + +L + L + + L+ D + +G
Sbjct: 88 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRG 142
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
L Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+L
Sbjct: 143 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGFLT 191
Query: 326 EELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
E ++ R + + + D++S G ++ E++S R
Sbjct: 192 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 155 FAEQNVIASGDNGVVYRAVL-LDNMRAAVKLLMSNSVSEEEDFIEK----VEAIGQVKHK 209
+ + I G G+V A L+ +R A+K + S E + + ++ ++ + + +H+
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHE 78
Query: 210 NLVKL----FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
N++ + +E + + + + +L + L + + L+ D + +G
Sbjct: 79 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRG 133
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
L Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+L
Sbjct: 134 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGFLT 182
Query: 326 EELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
E ++ R + + + D++S G ++ E++S R
Sbjct: 183 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 155 FAEQNVIASGDNGVVYRAVL-LDNMRAAVKLLMSNSVSEEEDFIEK----VEAIGQVKHK 209
+ + I G G+V A L+ +R A+K + S E + + ++ ++ + + +H+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHE 85
Query: 210 NLVKL----FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
N++ + +E + + + + +L + L + + L+ D + +G
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRG 140
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
L Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+L
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGFLT 189
Query: 326 EELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
E ++ R + + + D++S G ++ E++S R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y AVL N+ A+K L N + + E V + V HKN++ L
Sbjct: 31 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISL 87
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ LV E +D NL Q + L RM ++ G+
Sbjct: 88 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 139
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 140 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 194
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 195 VILGMG-YKENVDIWSVGCIMGEMVRHKI 222
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y AVL N+ A+K L N + + E V + V HKN++ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISL 82
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ LV E +D NL Q + L RM ++ G+
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 134
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 135 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 189
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 190 VILGMG-YKENVDIWSVGCIMGEMVRHKI 217
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y AVL N+ A+K L N + + E V + V HKN++ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISL 89
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ LV E +D NL Q + L RM ++ G+
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 141
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 142 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 196
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 197 VILGMG-YKENVDIWSVGCIMGEMVRHKI 224
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 19/160 (11%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
++H N+V+ + + ++ EY G L + + A + D Q G
Sbjct: 73 LRHPNIVRFKEVILTPTHLAIIMEYASGGELYE----RICNAGRFSEDEARFFFQQLLSG 128
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNP--KISDVGLAK---LHG-PEWSISTSCELR 319
++Y H +I H ++K N LLD P KI D G +K LH P+ ++ T
Sbjct: 129 VSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTP---- 181
Query: 320 NSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVD 359
Y+A E+ R + +DV+S G+ + ++ G P +
Sbjct: 182 --AYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE 219
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y AVL N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ LV E +D NL Q + L RM ++ G+
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 141 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 195
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMVRHKI 223
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/217 (23%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 144 SLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLD----NMRAAVKLLMS-NSVSEEEDFIE 198
S ++ +I + I G G V++ + + M A+K + S S E F++
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQ 60
Query: 199 KVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKI 258
+ + Q H ++VKL G E I++ E G L+ +L + + + D I
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFL-----QVRKFSLDLASLI 114
Query: 259 IQG--TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTS 315
+ + LAYL + VH ++ + N+L+ K+ D GL++ + + ++
Sbjct: 115 LYAYQLSTALAYLESK---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 316 CELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIV 352
+L E ++ R F SDV+ FG+ + EI+
Sbjct: 172 GKLPIKWMAPESINFRR--FTSASDVWMFGVCMWEIL 206
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 50/99 (50%), Gaps = 10/99 (10%)
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYL 324
YLH +++ ++K N+++D K++D G AK + G W + + E YL
Sbjct: 155 FEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE-----YL 206
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
A E+ + +N+ D ++ G+LI E+ +G P QP
Sbjct: 207 APEII-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 244
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y AVL N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ LV E +D NL Q + L RM ++ G+
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 141 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 195
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMVRHKI 223
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y AVL N+ A+K L N + + E V + V HKN++ L
Sbjct: 25 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISL 81
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ LV E +D NL Q + L RM ++ G+
Sbjct: 82 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 133
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 134 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 188
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 189 VILGMG-YKENVDIWSVGCIMGEMVRHKI 216
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/154 (24%), Positives = 76/154 (49%), Gaps = 14/154 (9%)
Query: 208 HKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
H N+VKL + + LV E ++ G L + + + K + I++ ++
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFE----RIKKKKHFSETEASYIMRKLVSAVS 120
Query: 268 YLHEDIEPKIVHHNMKSSNILL---DHHWNPKISDVGLAKLHGPE-WSISTSCELRNSGY 323
++H+ +VH ++K N+L + + KI D G A+L P+ + T C + Y
Sbjct: 121 HMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLH--Y 175
Query: 324 LAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
A EL + ++E D++S G+++ ++SG++P
Sbjct: 176 AAPELLNQNG-YDESCDLWSLGVILYTMLSGQVP 208
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 155 FAEQNVIASGDNGVVYRAVL-LDNMRAAVKLLMSNSVSEEEDFIEK----VEAIGQVKHK 209
+ + I G G+V A L+ +R A+K + S E + + ++ ++ + + +H+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHE 79
Query: 210 NLVKL----FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
N++ + +E + + + + +L + L + + L+ D + +G
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRG 134
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
L Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+L
Sbjct: 135 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGFLT 183
Query: 326 EELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
E ++ R + + + D++S G ++ E++S R
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y AVL N+ A+K L N + + E V + V HKN++ L
Sbjct: 26 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISL 82
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ LV E +D NL Q + L RM ++ G+
Sbjct: 83 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 134
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 135 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 189
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 190 VILGMG-YKENVDIWSVGCIMGEMVRHKI 217
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
++H N+V+ + + +V EY G L + + A + D Q G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFE----RICNAGRFSEDEARFFFQQLISG 127
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNP--KISDVGLAK---LHG-PEWSISTSCELR 319
++Y H ++ H ++K N LLD P KI+D G +K LH P+ ++ T +
Sbjct: 128 VSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASVLHSQPKSAVGTPAYIA 184
Query: 320 NSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPV-DYSQPQVF 366
L +E G+ + DV+S G+ + ++ G P D +P+ F
Sbjct: 185 PEVLLKKEYDGKVA------DVWSCGVTLYVMLVGAYPFEDPEEPKNF 226
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y AVL N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELV-LMKXVNHKNIISL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ LV E +D NL Q + L RM ++ G+
Sbjct: 89 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 141 HLHS---AGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 195
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMVRHKI 223
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 155 FAEQNVIASGDNGVVYRAVL-LDNMRAAVKLLMSNSVSEEEDFIEK----VEAIGQVKHK 209
+ + I G G+V A L+ +R A+K + S E + + ++ ++ + + +H+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHE 85
Query: 210 NLVKL----FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
N++ + +E + + + + +L + L + + L+ D + +G
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRG 140
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
L Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+L
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGFLX 189
Query: 326 EELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
E ++ R + + + D++S G ++ E++S R
Sbjct: 190 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 155 FAEQNVIASGDNGVVYRAVL-LDNMRAAVKLLMSNSVSEEEDFIEK----VEAIGQVKHK 209
+ + I G G+V A L+ +R A+K + S E + + ++ ++ + + +H+
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHE 86
Query: 210 NLVKL----FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
N++ + +E + + + + +L + L + + L+ D + +G
Sbjct: 87 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRG 141
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
L Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+L
Sbjct: 142 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGFLX 190
Query: 326 EELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
E ++ R + + + D++S G ++ E++S R
Sbjct: 191 EXVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 90/201 (44%), Gaps = 19/201 (9%)
Query: 160 VIASGDNGVVYRAVLLD----NMRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I G G V++ + + M A+K + S S E F+++ + Q H ++VKL
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQG--TAKGLAYLHED 272
G E I++ E G L+ +L + + + D I+ + LAYL
Sbjct: 457 IGVITENPVWIIM-ELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAYLESK 510
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGR 331
+ VH ++ + N+L+ + K+ D GL++ + + ++ +L E ++ R
Sbjct: 511 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 567
Query: 332 TSIFNEKSDVYSFGILIMEIV 352
F SDV+ FG+ + EI+
Sbjct: 568 R--FTSASDVWMFGVCMWEIL 586
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y AVL N+ A+K L N + + E V + V HKN++ L
Sbjct: 33 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISL 89
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ LV E +D NL Q + L RM ++ G+
Sbjct: 90 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 141
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 142 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 196
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 197 VILGMG-YKENVDIWSVGCIMGEMVRHKI 224
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y A+L N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ +V E +D NL Q + L RM ++ G+
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLSQVIQMELDHE-------RMSYLLYQMLCGIK 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 141 HLHS---AGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 195
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSG 354
+ + E D++S G ++ E++ G
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMIKG 221
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 86/200 (43%), Gaps = 17/200 (8%)
Query: 160 VIASGDNGVVYRAVLLD----NMRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I G G V++ + + M A+K + S S E F+++ + Q H ++VKL
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 76
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQG--TAKGLAYLHED 272
G E I++ E G L+ +L + + + D I+ + LAYL
Sbjct: 77 IGVITENPVWIIM-ELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAYLESK 130
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
+ VH ++ + N+L+ + K+ D GL++ S ++A E S
Sbjct: 131 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPE-SINF 186
Query: 333 SIFNEKSDVYSFGILIMEIV 352
F SDV+ FG+ + EI+
Sbjct: 187 RRFTSASDVWMFGVCMWEIL 206
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 155 FAEQNVIASGDNGVVYRAVL-LDNMRAAVKLLMSNSVSEEEDFIEK----VEAIGQVKHK 209
+ + I G G+V A L+ +R A+K + S E + + ++ ++ + + +H+
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHE 79
Query: 210 NLVKL----FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
N++ + +E + + + + +L + L + + L+ D + +G
Sbjct: 80 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRG 134
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
L Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+L
Sbjct: 135 LKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGFLT 183
Query: 326 EELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
E ++ R + + + D++S G ++ E++S R
Sbjct: 184 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
ED +V + +++H N++ L + IL+ E + G L + L E + LT +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEE 114
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP----KISDVGLAKLHGPE 309
+ ++ G+ YLH +I H ++K NI+L P KI D GLA H +
Sbjct: 115 EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKID 169
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ ++A E+ + E +D++S G++ ++SG P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 216
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y AVL N+ A+K L N + + E V + V HKN++ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISL 126
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ LV E +D NL Q + L RM ++ G+
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 178
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 179 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 233
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 234 VILGMG-YKENVDIWSVGCIMGEMVRHKI 261
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y A+L N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ +V E +D NL Q + L RM ++ G+
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 141 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 195
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSG 354
+ + E D++S G ++ E++ G
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMIKG 221
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
ED +V + +++H N++ L + IL+ E + G L + L E + LT +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEE 114
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP----KISDVGLAKLHGPE 309
+ ++ G+ YLH +I H ++K NI+L P KI D GLA H +
Sbjct: 115 EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKID 169
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ ++A E+ + E +D++S G++ ++SG P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 216
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y AVL N+ A+K L N + + E V + V HKN++ L
Sbjct: 70 IGSGAQGIVCAAYDAVLDRNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIISL 126
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ LV E +D NL Q + L RM ++ G+
Sbjct: 127 LNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 178
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 179 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 233
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 234 VILGMG-YKENVDIWSVGCIMGEMVRHKI 261
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
ED +V + +++H N++ L + IL+ E + G L + L E + LT +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEE 114
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP----KISDVGLAKLHGPE 309
+ ++ G+ YLH +I H ++K NI+L P KI D GLA H +
Sbjct: 115 EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKID 169
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ ++A E+ + E +D++S G++ ++SG P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 216
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
ED +V + +++H N++ L + IL+ E + G L + L E + LT +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEE 114
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP----KISDVGLAKLHGPE 309
+ ++ G+ YLH +I H ++K NI+L P KI D GLA H +
Sbjct: 115 EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKID 169
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ ++A E+ + E +D++S G++ ++SG P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
ED +V + +++H N++ L + IL+ E + G L + L E + LT +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEE 114
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP----KISDVGLAKLHGPE 309
+ ++ G+ YLH +I H ++K NI+L P KI D GLA H +
Sbjct: 115 EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKID 169
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ ++A E+ + E +D++S G++ ++SG P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 216
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 90/215 (41%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 103
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 157
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E YLA +
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE-----YLAPAI 209
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 210 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
ED +V + +++H N++ L + IL+ E + G L + L E + LT +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEE 114
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP----KISDVGLAKLHGPE 309
+ ++ G+ YLH +I H ++K NI+L P KI D GLA H +
Sbjct: 115 EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKID 169
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ ++A E+ + E +D++S G++ ++SG P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 216
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 155 FAEQNVIASGDNGVVYRAVL-LDNMRAAVKLLMSNSVSEEEDFIEK----VEAIGQVKHK 209
+ + I G G+V A L+ +R A+K + S E + + ++ ++ + + +H+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHE 85
Query: 210 NLVKL----FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
N++ + +E + + + + +L + L + + L+ D + +G
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRG 140
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
L Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+L
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD--------HTGFLT 189
Query: 326 EELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
E ++ R + + + D++S G ++ E++S R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/203 (23%), Positives = 90/203 (44%), Gaps = 20/203 (9%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-- 215
+ SG G V A +R AVK L S+ + ++ + +KH+N++ L
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 89
Query: 216 ---GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHED 272
+E N + + ++ +L ++ + + LT D +I +GL Y+H
Sbjct: 90 FTPARSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS- 143
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRT 332
I+H ++K SN+ ++ KI GLA+ E + + Y A E+
Sbjct: 144 --ADIIHRDLKPSNLAVNEDCELKILGFGLARHTDDE----MTGYVATRWYRAPEIMLNW 197
Query: 333 SIFNEKSDVYSFGILIMEIVSGR 355
+N+ D++S G ++ E+++GR
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 78/177 (44%), Gaps = 19/177 (10%)
Query: 186 MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLG 245
+ + +E D + KV H N+++L LV++ + G L +L
Sbjct: 53 LREATLKEVDILRKVSG-----HPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----T 103
Query: 246 EAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKL 305
E L+ KI++ + + LH+ IVH ++K NILLD N K++D G +
Sbjct: 104 EKVTLSEKETRKIMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQ 160
Query: 306 HGPEWSISTSCELRNSGYLAEE-----LSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
P + C YLA E ++ + ++ D++S G+++ +++G P
Sbjct: 161 LDPGEKLREVC--GTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
ED +V + +++H N++ L + IL+ E + G L + L E + LT +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEE 114
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP----KISDVGLAKLHGPE 309
+ ++ G+ YLH +I H ++K NI+L P KI D GLA H +
Sbjct: 115 EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKID 169
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ ++A E+ + E +D++S G++ ++SG P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 216
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y A+L N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ +V E +D NL Q + L RM ++ G+
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 141 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 195
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSG 354
+ + E D++S G ++ E++ G
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMIKG 221
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
ED +V + +++H N++ L + IL+ E + G L + L E + LT +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEE 113
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP----KISDVGLAKLHGPE 309
+ ++ G+ YLH +I H ++K NI+L P KI D GLA H +
Sbjct: 114 EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKID 168
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ ++A E+ + E +D++S G++ ++SG P
Sbjct: 169 FGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 215
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
ED +V + +++H N++ L + IL+ E + G L + L E + LT +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEE 114
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP----KISDVGLAKLHGPE 309
+ ++ G+ YLH +I H ++K NI+L P KI D GLA H +
Sbjct: 115 EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKID 169
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ ++A E+ + E +D++S G++ ++SG P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 216
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 91/207 (43%), Gaps = 30/207 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y A+L N+ A+K L N + + E V + V HKN++ L
Sbjct: 33 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGL 89
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ +V E +D NL Q + L RM ++ G+
Sbjct: 90 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 141
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 142 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 196
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSG 354
+ + E D++S G ++ E++ G
Sbjct: 197 VILGMG-YKENVDIWSVGCIMGEMIKG 222
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 144 SLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLM-----SNSVSEEEDFIE 198
S ++ +I + I G G V++ + + A+ + + S S E F++
Sbjct: 1 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 60
Query: 199 KVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKI 258
+ + Q H ++VKL G E I++ E G L+ +L + + + D I
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFL-----QVRKYSLDLASLI 114
Query: 259 IQG--TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTS 315
+ + LAYL + VH ++ + N+L+ + K+ D GL++ + + ++
Sbjct: 115 LYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 171
Query: 316 CELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIV 352
+L E ++ R F SDV+ FG+ + EI+
Sbjct: 172 GKLPIKWMAPESINFRR--FTSASDVWMFGVCMWEIL 206
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/229 (23%), Positives = 97/229 (42%), Gaps = 22/229 (9%)
Query: 139 LGIRISLKEIDIVT----DGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEE 194
LG R+++ E + + F + ++ G Y +L K ++++++E
Sbjct: 1 LGSRVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENR 60
Query: 195 DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
+ +H L L Y + +R+ V EY + G L + H L + + D
Sbjct: 61 -------VLQNSRHPFLTAL-KYSFQTHDRLCFVMEYANGGEL--FFH--LSRERVFSED 108
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSIS 313
L YLH E +V+ ++K N++LD + KI+D GL K G + +
Sbjct: 109 RARFYGAEIVSALDYLHS--EKNVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGAT 165
Query: 314 TSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ 362
YLA E+ + + D + G+++ E++ GRLP Y+Q
Sbjct: 166 MKXFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQ 212
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
ED +V + +++H N++ L + IL+ E + G L + L E + LT +
Sbjct: 58 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEE 113
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP----KISDVGLAKLHGPE 309
+ ++ G+ YLH +I H ++K NI+L P KI D GLA H +
Sbjct: 114 EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKID 168
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ ++A E+ + E +D++S G++ ++SG P
Sbjct: 169 FGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 215
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 21/102 (20%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
+GL Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGF 183
Query: 324 LAEELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
L E ++ R + + + D++S G ++ E++S R
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
ED +V + +++H N++ L + IL+ E + G L + L E + LT +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEE 114
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP----KISDVGLAKLHGPE 309
+ ++ G+ YLH +I H ++K NI+L P KI D GLA H +
Sbjct: 115 EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKID 169
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ ++A E+ + E +D++S G++ ++SG P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 216
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 21/102 (20%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
+GL Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+
Sbjct: 143 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGF 191
Query: 324 LAEELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
L E ++ R + + + D++S G ++ E++S R
Sbjct: 192 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 21/102 (20%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
+GL Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGF 183
Query: 324 LAEELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
L E ++ R + + + D++S G ++ E++S R
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 21/102 (20%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
+GL Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGF 187
Query: 324 LAEELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
L E ++ R + + + D++S G ++ E++S R
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 21/102 (20%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
+GL Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGF 185
Query: 324 LAEELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
L E ++ R + + + D++S G ++ E++S R
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 24/158 (15%)
Query: 161 IASGDNGVVYRAVLLDNMR--AAVKLLMSNSVSEEEDF----IEKVEAIGQVKHKNLVKL 214
I G G V++A + A K+LM N E+E F + +++ + +KH+N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQLLKHENVVNL 82
Query: 215 FGYC---VEGQNRI-----LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
C NR LV+++ ++ +L L L + T +++Q GL
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK---FTLSEIKRVMQMLLNGL 138
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK 304
Y+H + KI+H +MK++N+L+ K++D GLA+
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 19/201 (9%)
Query: 160 VIASGDNGVVYRAVLLDNMRAAVKLLM-----SNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I G G V++ + + A+ + + S S E F+++ + Q H ++VKL
Sbjct: 45 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 104
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQG--TAKGLAYLHED 272
G E I++ E G L+ +L + + + D I+ + LAYL
Sbjct: 105 IGVITENPVWIIM-ELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLESK 158
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGR 331
+ VH ++ + N+L+ + K+ D GL++ + + ++ +L E ++ R
Sbjct: 159 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 215
Query: 332 TSIFNEKSDVYSFGILIMEIV 352
F SDV+ FG+ + EI+
Sbjct: 216 R--FTSASDVWMFGVCMWEIL 234
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 21/102 (20%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
+GL Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGF 185
Query: 324 LAEELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
L E ++ R + + + D++S G ++ E++S R
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/220 (20%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 155 FAEQNVIASGDNGVVYRAVL-LDNMRAAVKLLMSNSVSEEEDFIEK----VEAIGQVKHK 209
+ + I G G+V A L+ +R A+K + S E + + ++ ++ + + +H+
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKI---SPFEHQTYXQRTLREIKILLRFRHE 85
Query: 210 NLVKL----FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
N++ + +E + + + + +L + L + + L+ D + +G
Sbjct: 86 NIIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLL-----KTQHLSNDHICYFLYQILRG 140
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
L Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+L
Sbjct: 141 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD--------HTGFLT 189
Query: 326 EELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
E ++ R + + + D++S G ++ E++S R
Sbjct: 190 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/220 (20%), Positives = 102/220 (46%), Gaps = 38/220 (17%)
Query: 155 FAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEK----VEAIGQVKHK 209
+ + I G G+V A ++ +R A+K + S E + + ++ ++ + + +H+
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKI---SPFEHQTYCQRTLREIKILLRFRHE 101
Query: 210 NLVKL----FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
N++ + +E + + ++ +L + L + + L+ D + +G
Sbjct: 102 NIIGINDIIRAPTIEQMKDVYLVTHLMGADLYKLL-----KTQHLSNDHICYFLYQILRG 156
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLA 325
L Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+L
Sbjct: 157 LKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD--------HTGFLT 205
Query: 326 EELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
E ++ R + + + D++S G ++ E++S R
Sbjct: 206 EYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/201 (22%), Positives = 89/201 (44%), Gaps = 19/201 (9%)
Query: 160 VIASGDNGVVYRAVLLDNMRAAVKLLM-----SNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I G G V++ + + A+ + + S S E F+++ + Q H ++VKL
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 73
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQG--TAKGLAYLHED 272
G E I++ E G L+ +L + + + D I+ + LAYL
Sbjct: 74 IGVITENPVWIIM-ELCTLGELRSFL-----QVRKYSLDLASLILYAYQLSTALAYLESK 127
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGR 331
+ VH ++ + N+L+ + K+ D GL++ + + ++ +L E ++ R
Sbjct: 128 ---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 184
Query: 332 TSIFNEKSDVYSFGILIMEIV 352
F SDV+ FG+ + EI+
Sbjct: 185 R--FTSASDVWMFGVCMWEIL 203
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 144 SLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLM-----SNSVSEEEDFIE 198
S ++ +I + I G G V++ + + A+ + + S S E F++
Sbjct: 3 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 62
Query: 199 KVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKI 258
+ + Q H ++VKL G E I++ E G L+ +L + + + D I
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFL-----QVRKYSLDLASLI 116
Query: 259 IQG--TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTS 315
+ + LAYL + VH ++ + N+L+ + K+ D GL++ + + ++
Sbjct: 117 LYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 173
Query: 316 CELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIV 352
+L E ++ R F SDV+ FG+ + EI+
Sbjct: 174 GKLPIKWMAPESINFRR--FTSASDVWMFGVCMWEIL 208
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
++H N+V+ + + +V EY G L + + A + D Q G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFE----RICNAGRFSEDEARFFFQQLISG 127
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNP--KISDVGLAK---LHG-PEWSISTSCELR 319
++Y H ++ H ++K N LLD P KI D G +K LH P+ ++ T +
Sbjct: 128 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIA 184
Query: 320 NSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPV-DYSQPQVF 366
L +E G+ + DV+S G+ + ++ G P D +P+ F
Sbjct: 185 PEVLLKKEYDGKVA------DVWSCGVTLYVMLVGAYPFEDPEEPKNF 226
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 144 SLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLM-----SNSVSEEEDFIE 198
S ++ +I + I G G V++ + + A+ + + S S E F++
Sbjct: 6 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 65
Query: 199 KVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKI 258
+ + Q H ++VKL G E I++ E G L+ +L + + + D I
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFL-----QVRKYSLDLASLI 119
Query: 259 IQG--TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTS 315
+ + LAYL + VH ++ + N+L+ + K+ D GL++ + + ++
Sbjct: 120 LYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 176
Query: 316 CELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIV 352
+L E ++ R F SDV+ FG+ + EI+
Sbjct: 177 GKLPIKWMAPESINFRR--FTSASDVWMFGVCMWEIL 211
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 97/218 (44%), Gaps = 20/218 (9%)
Query: 146 KEIDIVTDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMS--NSVSEEEDFIEKVEA 202
K I V + + + + SG G V + + ++ AVK L S+ + ++
Sbjct: 44 KTIWEVPERYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRL 103
Query: 203 IGQVKHKNLVKLF-----GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK 257
+ +KH+N++ L +E N + + ++ +L ++ + + LT D
Sbjct: 104 LKHMKHENVIGLLDVFTPATSLEEFNDVYLVTHLMGADL-----NNIVKCQKLTDDHVQF 158
Query: 258 IIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCE 317
+I +GL Y+H I+H ++K SN+ ++ KI D GLA+ E +
Sbjct: 159 LIYQILRGLKYIHS---ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDE----MTGY 211
Query: 318 LRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
+ Y A E+ +N D++S G ++ E+++GR
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 161 IASGDNGVVYRAVLLDNMR--AAVKLLMSNSVSEEEDF----IEKVEAIGQVKHKNLVKL 214
I G G V++A + A K+LM N E+E F + +++ + +KH+N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQLLKHENVVNL 82
Query: 215 FGYC---VEGQNRILVYEYIDNGNLQQWLHGSLGEA-KPLTWDTRMKIIQGTAKGLAYLH 270
C NR Y+ + L G L T +++Q GL Y+H
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLSEIKRVMQMLLNGLYYIH 142
Query: 271 EDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK 304
+ KI+H +MK++N+L+ K++D GLA+
Sbjct: 143 RN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 21/102 (20%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
+GL Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+
Sbjct: 155 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHD--------HTGF 203
Query: 324 LAEELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
L E ++ R + + + D++S G ++ E++S R
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 77/181 (42%), Gaps = 21/181 (11%)
Query: 248 KPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK--L 305
+P+T + + A+G+ +L K +H ++ + NILL + KI D GLA+
Sbjct: 194 EPITMEDLISYSFQVARGMEFLSSR---KCIHRDLAARNILLSENNVVKICDFGLARDIY 250
Query: 306 HGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS-GRLPVDYSQPQ 364
P++ L E + + I++ KSDV+S+G+L+ EI S G P Q
Sbjct: 251 KNPDYVRKGDTRLPLKWMAPESIFDK--IYSTKSDVWSYGVLLWEIFSLGGSPYPGVQMD 308
Query: 365 VFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRM 424
L+ + + Y PE I I L C D K RP+ +++
Sbjct: 309 EDFCSRLREGMRMRAPEY----STPE---------IYQIMLDCWHRDPKERPRFAELVEK 355
Query: 425 L 425
L
Sbjct: 356 L 356
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 21/102 (20%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
+GL Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD--------HTGF 183
Query: 324 LAEELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
L E ++ R + + + D++S G ++ E++S R
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/201 (23%), Positives = 89/201 (44%), Gaps = 19/201 (9%)
Query: 160 VIASGDNGVVYRAVLLD----NMRAAVKLLMS-NSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I G G V++ + + M A+K + S S E F+++ + Q H ++VKL
Sbjct: 397 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKL 456
Query: 215 FGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQG--TAKGLAYLHED 272
G E I++ E G L+ +L + + + D I+ + LAYL
Sbjct: 457 IGVITENPVWIIM-ELCTLGELRSFL-----QVRKFSLDLASLILYAYQLSTALAYLESK 510
Query: 273 IEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGR 331
+ VH ++ + N+L+ K+ D GL++ + + ++ +L E ++ R
Sbjct: 511 ---RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFR 567
Query: 332 TSIFNEKSDVYSFGILIMEIV 352
F SDV+ FG+ + EI+
Sbjct: 568 R--FTSASDVWMFGVCMWEIL 586
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/217 (22%), Positives = 95/217 (43%), Gaps = 19/217 (8%)
Query: 144 SLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLM-----SNSVSEEEDFIE 198
S ++ +I + I G G V++ + + A+ + + S S E F++
Sbjct: 4 STRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQ 63
Query: 199 KVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKI 258
+ + Q H ++VKL G E I++ E G L+ +L + + + D I
Sbjct: 64 EALTMRQFDHPHIVKLIGVITENPVWIIM-ELCTLGELRSFL-----QVRKYSLDLASLI 117
Query: 259 IQG--TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTS 315
+ + LAYL + VH ++ + N+L+ + K+ D GL++ + + ++
Sbjct: 118 LYAYQLSTALAYLESK---RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK 174
Query: 316 CELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIV 352
+L E ++ R F SDV+ FG+ + EI+
Sbjct: 175 GKLPIKWMAPESINFRR--FTSASDVWMFGVCMWEIL 209
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 21/102 (20%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
+GL Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHD--------HTGF 183
Query: 324 LAEELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
L E ++ R + + + D++S G ++ E++S R
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 9/177 (5%)
Query: 208 HKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQG-TAKGL 266
H + Y E + + + I NG ++ ++ E P + R GL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
+LH+ I++ ++K N+LLD N +ISD+GLA + T G++A
Sbjct: 303 EHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKGYAGTPGFMAP 358
Query: 327 E-LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAY 382
E L G F+ D ++ G+ + E+++ R P +V + LK V +Q + Y
Sbjct: 359 ELLLGEEYDFS--VDYFALGVTLYEMIAARGPFRARGEKVENKE-LKQRVLEQAVTY 412
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 9/177 (5%)
Query: 208 HKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQG-TAKGL 266
H + Y E + + + I NG ++ ++ E P + R GL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
+LH+ I++ ++K N+LLD N +ISD+GLA + T G++A
Sbjct: 303 EHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKGYAGTPGFMAP 358
Query: 327 E-LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAY 382
E L G F+ D ++ G+ + E+++ R P +V + LK V +Q + Y
Sbjct: 359 ELLLGEEYDFS--VDYFALGVTLYEMIAARGPFRARGEKVENKE-LKQRVLEQAVTY 412
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 83/189 (43%), Gaps = 19/189 (10%)
Query: 231 IDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLD 290
+ + +L ++ + + + + D KI K L +LH + ++H ++K SN+L++
Sbjct: 114 LXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKL--SVIHRDVKPSNVLIN 171
Query: 291 HHWNPKISDVGLAK--LHGPEWSISTSCELRNSG-YLAEELSGRTSIFNEKSDVYSFGIL 347
K D G++ + I C+ + + EL+ + ++ KSD++S GI
Sbjct: 172 ALGQVKXCDFGISGYLVDDVAKDIDAGCKPYXAPERINPELNQKG--YSVKSDIWSLGIT 229
Query: 348 IMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRC 407
+E+ R P D W Q++ V++ P++P+ K + +C
Sbjct: 230 XIELAILRFPYD---------SWGTPF---QQLKQVVEEPSPQLPADKFSAEFVDFTSQC 277
Query: 408 VDPDIKHRP 416
+ + K RP
Sbjct: 278 LKKNSKERP 286
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 9/177 (5%)
Query: 208 HKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQG-TAKGL 266
H + Y E + + + I NG ++ ++ E P + R GL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
+LH+ I++ ++K N+LLD N +ISD+GLA + T G++A
Sbjct: 303 EHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKGYAGTPGFMAP 358
Query: 327 E-LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAY 382
E L G F+ D ++ G+ + E+++ R P +V + LK V +Q + Y
Sbjct: 359 ELLLGEEYDFS--VDYFALGVTLYEMIAARGPFRARGEKVENKE-LKQRVLEQAVTY 412
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
++H N+V+ + + +V EY G L + + A + D Q G
Sbjct: 71 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFE----RICNAGRFSEDEARFFFQQLISG 126
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNP--KISDVGLAK---LHG-PEWSISTSCELR 319
++Y H ++ H ++K N LLD P KI D G +K LH P+ ++ T +
Sbjct: 127 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAYIA 183
Query: 320 NSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPV-DYSQPQVF 366
L +E G+ + DV+S G+ + ++ G P D +P+ F
Sbjct: 184 PEVLLKKEYDGKVA------DVWSCGVTLYVMLVGAYPFEDPEEPKNF 225
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 24/158 (15%)
Query: 161 IASGDNGVVYRAVLLDNMR--AAVKLLMSNSVSEEEDF----IEKVEAIGQVKHKNLVKL 214
I G G V++A + A K+LM N E+E F + +++ + +KH+N+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQLLKHENVVNL 81
Query: 215 FGYC---VEGQNRI-----LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
C NR LV+++ ++ +L L L + T +++Q GL
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK---FTLSEIKRVMQMLLNGL 137
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK 304
Y+H + KI+H +MK++N+L+ K++D GLA+
Sbjct: 138 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 172
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 217 YCVEGQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEP 275
Y + +R+ V EY + G L + H L + + D L YLH E
Sbjct: 77 YSFQTHDRLCFVMEYANGGEL--FFH--LSRERVFSEDRARFYGAEIVSALDYLHS--EK 130
Query: 276 KIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIF 335
+V+ ++K N++LD + KI+D GL K G + + YLA E+ + +
Sbjct: 131 NVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVL-EDNDY 188
Query: 336 NEKSDVYSFGILIMEIVSGRLPVDYSQ 362
D + G+++ E++ GRLP Y+Q
Sbjct: 189 GRAVDWWGLGVVMYEMMCGRLPF-YNQ 214
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 217 YCVEGQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEP 275
Y + +R+ V EY + G L + H L + + D L YLH E
Sbjct: 215 YSFQTHDRLCFVMEYANGGEL--FFH--LSRERVFSEDRARFYGAEIVSALDYLHS--EK 268
Query: 276 KIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIF 335
+V+ ++K N++LD + KI+D GL K G + + YLA E+ + +
Sbjct: 269 NVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEVL-EDNDY 326
Query: 336 NEKSDVYSFGILIMEIVSGRLPVDYSQ 362
D + G+++ E++ GRLP Y+Q
Sbjct: 327 GRAVDWWGLGVVMYEMMCGRLPF-YNQ 352
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 9/177 (5%)
Query: 208 HKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQG-TAKGL 266
H + Y E + + + I NG ++ ++ E P + R GL
Sbjct: 243 HSRFIVSLAYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGL 302
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAE 326
+LH+ I++ ++K N+LLD N +ISD+GLA + T G++A
Sbjct: 303 EHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLA-VELKAGQTKTKGYAGTPGFMAP 358
Query: 327 E-LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAY 382
E L G F+ D ++ G+ + E+++ R P +V + LK V +Q + Y
Sbjct: 359 ELLLGEEYDFS--VDYFALGVTLYEMIAARGPFRARGEKVENKE-LKQRVLEQAVTY 412
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y A+L N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ +V E +D NL Q + L RM ++ G+
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDH-------ERMSYLLYQMLCGIK 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + + E+ Y A E
Sbjct: 141 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP--EVVTRYYRAPE 195
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 196 VILGMG-YKENVDIWSVGCIMGEMVCHKI 223
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 217 YCVEGQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEP 275
Y + +R+ V EY + G L + H L + + D L YLH E
Sbjct: 76 YSFQTHDRLCFVMEYANGGEL--FFH--LSRERVFSEDRARFYGAEIVSALDYLHS--EK 129
Query: 276 KIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIF 335
+V+ ++K N++LD + KI+D GL K G + + YLA E+ + +
Sbjct: 130 NVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKXFCGTPEYLAPEVL-EDNDY 187
Query: 336 NEKSDVYSFGILIMEIVSGRLPVDYSQ 362
D + G+++ E++ GRLP Y+Q
Sbjct: 188 GRAVDWWGLGVVMYEMMCGRLPF-YNQ 213
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 90/215 (41%), Gaps = 25/215 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNL 211
T F ++ ++G Y +LD + + ++++E+ + V L
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR-------ILQAVNFPFL 103
Query: 212 VKLFGYCVEGQNRILVYEYIDNGNLQQWLH--GSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
VKL + N +V EY+ G + L G E + ++ + YL
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLT------FEYL 157
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEEL 328
H +++ ++K N+L+D +++D G AK + G W + + E LA E+
Sbjct: 158 HS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPEA-----LAPEI 209
Query: 329 SGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQP 363
+ +N+ D ++ G+LI E+ +G P QP
Sbjct: 210 I-LSKGYNKAVDWWALGVLIYEMAAGYPPFFADQP 243
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 10/147 (6%)
Query: 217 YCVEGQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEP 275
Y + +R+ V EY + G L + H L + + D L YLH E
Sbjct: 218 YSFQTHDRLCFVMEYANGGEL--FFH--LSRERVFSEDRARFYGAEIVSALDYLHS--EK 271
Query: 276 KIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIF 335
+V+ ++K N++LD + KI+D GL K G + + YLA E+ + +
Sbjct: 272 NVVYRDLKLENLMLDKDGHIKITDFGLCK-EGIKDGATMKTFCGTPEYLAPEVL-EDNDY 329
Query: 336 NEKSDVYSFGILIMEIVSGRLPVDYSQ 362
D + G+++ E++ GRLP Y+Q
Sbjct: 330 GRAVDWWGLGVVMYEMMCGRLPF-YNQ 355
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 21/102 (20%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
+GL Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHD--------HTGF 183
Query: 324 LAEELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
L E ++ R + + + D++S G ++ E++S R
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
ED +V + +++H N++ L + IL+ E + G L + L E + LT +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDF----LAEKESLTEE 114
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP----KISDVGLAKLHGPE 309
+ ++ G+ YLH +I H ++K NI+L P KI D GLA H +
Sbjct: 115 EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKID 169
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ ++A E+ + E +D++S G++ ++SG P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 216
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 76/168 (45%), Gaps = 14/168 (8%)
Query: 194 EDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWD 253
ED +V + +++H N++ L + IL+ E + G L + L E + LT +
Sbjct: 59 EDIEREVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDF----LAEKESLTEE 114
Query: 254 TRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP----KISDVGLAKLHGPE 309
+ ++ G+ YLH +I H ++K NI+L P KI D GLA H +
Sbjct: 115 EATEFLKQILNGVYYLH---SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA--HKID 169
Query: 310 WSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
+ ++A E+ + E +D++S G++ ++SG P
Sbjct: 170 FGNEFKNIFGTPEFVAPEIVNYEPLGLE-ADMWSIGVITYILLSGASP 216
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 21/102 (20%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
+GL Y+H ++H ++K SN+LL+ + KI D GLA++ P+ ++G+
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHD--------HTGF 185
Query: 324 LAEELSGR----------TSIFNEKSDVYSFGILIMEIVSGR 355
L E ++ R + + + D++S G ++ E++S R
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 78/158 (49%), Gaps = 24/158 (15%)
Query: 161 IASGDNGVVYRAVLLDNMR--AAVKLLMSNSVSEEEDF----IEKVEAIGQVKHKNLVKL 214
I G G V++A + A K+LM N E+E F + +++ + +KH+N+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKVLMEN---EKEGFPITALREIKILQLLKHENVVNL 82
Query: 215 FGYC---VEGQNRI-----LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
C NR LV+++ ++ +L L L + T +++Q GL
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCEH-DLAGLLSNVLVK---FTLSEIKRVMQMLLNGL 138
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK 304
Y+H + KI+H +MK++N+L+ K++D GLA+
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLAR 173
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y A+L N+ A+K L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGL 88
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ +V E +D NL Q + L RM ++ G+
Sbjct: 89 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDH-------ERMSYLLYQMLCGIK 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + + E+ Y A E
Sbjct: 141 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEP--EVVTRYYRAPE 195
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 196 VILGMG-YKENVDLWSVGCIMGEMVCHKI 223
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 90/207 (43%), Gaps = 30/207 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y A+L N+ A+K L N + + E V + V HKN++ L
Sbjct: 34 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGL 90
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ +V E +D NL Q + L RM ++ G+
Sbjct: 91 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 142
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + + R Y A E
Sbjct: 143 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRY--YRAPE 197
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSG 354
+ + E D++S G ++ E++ G
Sbjct: 198 VILGMG-YKENVDIWSVGCIMGEMIKG 223
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y A+L N+ A+K L N + + E V + V HKN++ L
Sbjct: 37 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGL 93
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ +V E +D NL Q + L RM ++ G+
Sbjct: 94 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 145
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 146 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 200
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 201 VILGMG-YKENVDLWSVGCIMGEMVCHKI 228
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 20/150 (13%)
Query: 225 ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+L EY + G+L+++L+ L ++ + L YLHE+ +I+H ++K
Sbjct: 95 LLAMEYCEGGDLRKYLN-QFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKP 150
Query: 285 SNILLD---HHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSD 340
NI+L KI D+G AK L E L+ YLA EL + + D
Sbjct: 151 ENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQ---YLAPELLEQKK-YTVTVD 206
Query: 341 VYSFGILIMEIVSGRLPVDYSQPQVFLIDW 370
+SFG L E ++G P FL +W
Sbjct: 207 YWSFGTLAFECITGFRP--------FLPNW 228
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 92/209 (44%), Gaps = 30/209 (14%)
Query: 161 IASGDNGVV---YRAVLLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKL 214
I SG G+V Y A+L N+ A+K L N + + E V + V HKN++ L
Sbjct: 26 IGSGAQGIVCAAYDAILERNV--AIKKLSRPFQNQTHAKRAYRELV-LMKCVNHKNIIGL 82
Query: 215 FGYCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLA 267
E Q+ +V E +D NL Q + L RM ++ G+
Sbjct: 83 LNVFTPQKSLEEFQDVYIVMELMD-ANLCQVIQMELDHE-------RMSYLLYQMLCGIK 134
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE 327
+LH I+H ++K SNI++ KI D GLA+ G + ++ R Y A E
Sbjct: 135 HLHS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPE 189
Query: 328 LSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
+ + E D++S G ++ E+V ++
Sbjct: 190 VILGMG-YKENVDLWSVGCIMGEMVCHKI 217
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 20/150 (13%)
Query: 225 ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKS 284
+L EY + G+L+++L+ L ++ + L YLHE+ +I+H ++K
Sbjct: 94 LLAMEYCEGGDLRKYLN-QFENCCGLKEGPIRTLLSDISSALRYLHEN---RIIHRDLKP 149
Query: 285 SNILLD---HHWNPKISDVGLAK-LHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSD 340
NI+L KI D+G AK L E L+ YLA EL + + D
Sbjct: 150 ENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTLQ---YLAPELLEQKK-YTVTVD 205
Query: 341 VYSFGILIMEIVSGRLPVDYSQPQVFLIDW 370
+SFG L E ++G P FL +W
Sbjct: 206 YWSFGTLAFECITGFRP--------FLPNW 227
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 100/233 (42%), Gaps = 43/233 (18%)
Query: 151 VTDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLL-MSNSVSEEEDFIEKVEAIGQVKH 208
+TD F + G GVV+ A +D+ A+K + + N E + +V+A+ +++H
Sbjct: 4 LTD-FEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEH 62
Query: 209 KNLVKLFGYCVEGQ-------NRILVYEYID-----NGNLQQWLHGSLGEAKPLTWDTR- 255
+V+ F +E + VY YI NL+ W++G T + R
Sbjct: 63 PGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRC------TIEERE 116
Query: 256 ----MKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWS 311
+ I A+ + +LH ++H ++K SNI K+ D GL +
Sbjct: 117 RSVCLHIFLQIAEAVEFLHSK---GLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEE 173
Query: 312 IST-----SCELRNSGYLA-------EELSGRTSIFNEKSDVYSFGILIMEIV 352
T R++G + E++ G + ++ K D++S G+++ E++
Sbjct: 174 EQTVLTPMPAYARHTGQVGTKLYMSPEQIHGNS--YSHKVDIFSLGLILFELL 224
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/184 (22%), Positives = 83/184 (45%), Gaps = 19/184 (10%)
Query: 179 RAAVKLLMS--NSVSEEEDFIEKVEAIGQVKHKNLVKLF-----GYCVEGQNRILVYEYI 231
R AVK L S+ + ++ + +KH+N++ L +E N + + ++
Sbjct: 49 RVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHL 108
Query: 232 DNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDH 291
+L ++ + + LT D +I +GL Y+H I+H ++K SN+ ++
Sbjct: 109 MGADL-----NNIVKCQKLTDDHVQFLIYQILRGLKYIHS---ADIIHRDLKPSNLAVNE 160
Query: 292 HWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEI 351
KI D LA+ E + + Y A E+ +N+ D++S G ++ E+
Sbjct: 161 DCELKILDFYLARHTDDE----MTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAEL 216
Query: 352 VSGR 355
++GR
Sbjct: 217 LTGR 220
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 197 IEKVEAIGQVKHKNLVKLFGY----CVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTW 252
+ +++ + KH+N++ +F E N + YI +Q LH + + L+
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEV----YIIQELMQTDLHRVIS-TQMLSD 111
Query: 253 DTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSI 312
D I T + + LH ++H ++K SN+L++ + + K+ D GLA++ +
Sbjct: 112 DHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 313 STSCELRNSG---------YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
++ + SG Y A E+ ++ ++ DV+S G ++ E+ R
Sbjct: 169 NSEPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 197 IEKVEAIGQVKHKNLVKLFGY----CVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTW 252
+ +++ + KH+N++ +F E N + YI +Q LH + + L+
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEV----YIIQELMQTDLHRVIS-TQMLSD 111
Query: 253 DTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSI 312
D I T + + LH ++H ++K SN+L++ + + K+ D GLA++ +
Sbjct: 112 DHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 313 STSCELRNSG---------YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
++ + SG Y A E+ ++ ++ DV+S G ++ E+ R
Sbjct: 169 NSEPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 79/172 (45%), Gaps = 21/172 (12%)
Query: 197 IEKVEAIGQVKHKNLVKLFGY----CVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTW 252
+ +++ + KH+N++ +F E N + YI +Q LH + + L+
Sbjct: 57 LREIKILKHFKHENIITIFNIQRPDSFENFNEV----YIIQELMQTDLHRVIS-TQMLSD 111
Query: 253 DTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSI 312
D I T + + LH ++H ++K SN+L++ + + K+ D GLA++ +
Sbjct: 112 DHIQYFIYQTLRAVKVLHGS---NVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAAD 168
Query: 313 STSCELRNSG---------YLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
++ + SG Y A E+ ++ ++ DV+S G ++ E+ R
Sbjct: 169 NSEPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRR 220
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 88/188 (46%), Gaps = 32/188 (17%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+E+++N + +Q L+ +L + +D R + + K L Y H I+H ++K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRFYMYE-ILKALDYCHS---MGIMHRDVKPH 160
Query: 286 NILLDH-HWNPKISDVGLAKLHGP--EWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+L+DH H ++ D GLA+ + P E+++ + + EL +++ D++
Sbjct: 161 NVLIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVDYQMYDYSLDMW 216
Query: 343 SFGILIMEIVSGRLPV-----DYSQPQVFLIDWLKSMVAQQKIAYV------LDPKLPEM 391
S G ++ ++ + P +Y Q L+ K + + Y+ LDP+ ++
Sbjct: 217 SLGCMLASMIFRKEPFFHGHDNYDQ----LVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 392 PSRKELKR 399
R KR
Sbjct: 273 LGRHSRKR 280
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 87/205 (42%), Gaps = 26/205 (12%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFG 216
I SG G+V A + + AVK L N + + E V + V HKN++ L
Sbjct: 32 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELV-LLKCVNHKNIISLLN 90
Query: 217 YCV------EGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMK-IIQGTAKGLAYL 269
E Q+ LV E +D NL Q +H L RM ++ G+ +L
Sbjct: 91 VFTPQKTLEEFQDVYLVMELMD-ANLCQVIHMELDHE-------RMSYLLYQMLCGIKHL 142
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELS 329
H I+H ++K SNI++ KI D GLA+ + ++ R Y A E+
Sbjct: 143 HS---AGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRY--YRAPEVI 197
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSG 354
+ D++S G ++ E+V G
Sbjct: 198 LGMG-YAANVDIWSVGCIMGELVKG 221
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/226 (21%), Positives = 96/226 (42%), Gaps = 14/226 (6%)
Query: 150 IVTDGFAEQNVIASGDNGVVYRAVLLDN-MRAAVKLL-----MSNSVSEEEDFIEKVEAI 203
+ D + VI G VV R + + + AVK++ S+ ED +
Sbjct: 21 LFEDVYELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 204 GQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTA 263
+KH ++V+L +V+E++D +L + + ++
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLAKLHGPEWSISTSCELRN 320
+ L Y H++ I+H ++K N+LL N K+ D G+A G E + +
Sbjct: 141 EALRYCHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLG-ESGLVAGGRVGT 196
Query: 321 SGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVF 366
++A E+ R + + DV+ G+++ ++SG LP ++ ++F
Sbjct: 197 PHFMAPEVVKREP-YGKPVDVWGCGVILFILLSGCLPFYGTKERLF 241
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 56/259 (21%), Positives = 115/259 (44%), Gaps = 43/259 (16%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLM---SNSVSEEEDFIEKVEAIGQVKHKNLVKLFG 216
+ G V+ A+ + +N + VK+L N + E +E + N++ L
Sbjct: 45 LGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKREIKILENLRG-----GPNIITLAD 99
Query: 217 YCVEGQNRI--LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
+ +R LV+E+++N + +Q L+ +L + +D R + + K L Y H
Sbjct: 100 IVKDPVSRTPALVFEHVNNTDFKQ-LYQTLTD-----YDIRFYMYE-ILKALDYCHS--- 149
Query: 275 PKIVHHNMKSSNILLDH-HWNPKISDVGLAKLHGP--EWSISTSCELRNSGYLAEELSGR 331
I+H ++K N+++DH H ++ D GLA+ + P E+++ + + EL
Sbjct: 150 MGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVD 205
Query: 332 TSIFNEKSDVYSFGILIMEIVSGRLPV-----DYSQPQVFLIDWLKSMVAQQKIAYV--- 383
+++ D++S G ++ ++ + P +Y Q L+ K + + Y+
Sbjct: 206 YQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQ----LVRIAKVLGTEDLYDYIDKY 261
Query: 384 ---LDPKLPEMPSRKELKR 399
LDP+ ++ R KR
Sbjct: 262 NIELDPRFNDILGRHSRKR 280
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 262 TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELR 319
AKG+ +L K +H ++ + NILL KI D GLA+ P++ L
Sbjct: 207 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 263
Query: 320 NSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
E + R ++ +SDV+SFG+L+ EI S
Sbjct: 264 LKWMAPETIFDR--VYTIQSDVWSFGVLLWEIFS 295
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 262 TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELR 319
AKG+ +L K +H ++ + NILL KI D GLA+ P++ L
Sbjct: 209 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 265
Query: 320 NSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
E + R ++ +SDV+SFG+L+ EI S
Sbjct: 266 LKWMAPETIFDR--VYTIQSDVWSFGVLLWEIFS 297
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 262 TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELR 319
AKG+ +L K +H ++ + NILL KI D GLA+ P++ L
Sbjct: 202 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 258
Query: 320 NSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
E + R ++ +SDV+SFG+L+ EI S
Sbjct: 259 LKWMAPETIFDR--VYTIQSDVWSFGVLLWEIFS 290
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)
Query: 262 TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELR 319
AKG+ +L K +H ++ + NILL KI D GLA+ P++ L
Sbjct: 200 VAKGMEFLASR---KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLP 256
Query: 320 NSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVS 353
E + R ++ +SDV+SFG+L+ EI S
Sbjct: 257 LKWMAPETIFDR--VYTIQSDVWSFGVLLWEIFS 288
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 13/138 (9%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+EYI+N + +Q L+ L + +D R + + K L Y H I+H ++K
Sbjct: 112 LVFEYINNTDFKQ-LYQILTD-----FDIRFYMYE-LLKALDYCHS---KGIMHRDVKPH 161
Query: 286 NILLDHHWNP-KISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSF 344
N+++DH ++ D GLA+ + P + R + EL +++ D++S
Sbjct: 162 NVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRY--FKGPELLVDYQMYDYSLDMWSL 219
Query: 345 GILIMEIVSGRLPVDYSQ 362
G ++ ++ R P + Q
Sbjct: 220 GCMLASMIFRREPFFHGQ 237
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 66/138 (47%), Gaps = 13/138 (9%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+EYI+N + +Q L+ L + +D R + + K L Y H I+H ++K
Sbjct: 117 LVFEYINNTDFKQ-LYQILTD-----FDIRFYMYE-LLKALDYCHS---KGIMHRDVKPH 166
Query: 286 NILLDHHWNP-KISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSF 344
N+++DH ++ D GLA+ + P + R + EL +++ D++S
Sbjct: 167 NVMIDHQQKKLRLIDWGLAEFYHPAQEYNVRVASRY--FKGPELLVDYQMYDYSLDMWSL 224
Query: 345 GILIMEIVSGRLPVDYSQ 362
G ++ ++ R P + Q
Sbjct: 225 GCMLASMIFRREPFFHGQ 242
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 32/188 (17%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+E+++N + +Q L+ +L + +D R + + K L Y H I+H ++K
Sbjct: 110 LVFEHVNNTDFKQ-LYQTLTD-----YDIRFYMYE-ILKALDYCHS---MGIMHRDVKPH 159
Query: 286 NILLDH-HWNPKISDVGLAKLHGP--EWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+++DH H ++ D GLA+ + P E+++ + + EL +++ D++
Sbjct: 160 NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVDYQMYDYSLDMW 215
Query: 343 SFGILIMEIVSGRLPV-----DYSQPQVFLIDWLKSMVAQQKIAYV------LDPKLPEM 391
S G ++ ++ + P +Y Q L+ K + + Y+ LDP+ ++
Sbjct: 216 SLGCMLASMIFRKEPFFHGHDNYDQ----LVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 271
Query: 392 PSRKELKR 399
R KR
Sbjct: 272 LGRHSRKR 279
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 32/188 (17%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+E+++N + +Q L+ +L + +D R + + K L Y H I+H ++K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRFYMYE-ILKALDYCHS---MGIMHRDVKPH 160
Query: 286 NILLDH-HWNPKISDVGLAKLHGP--EWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+++DH H ++ D GLA+ + P E+++ + + EL +++ D++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVDYQMYDYSLDMW 216
Query: 343 SFGILIMEIVSGRLPV-----DYSQPQVFLIDWLKSMVAQQKIAYV------LDPKLPEM 391
S G ++ ++ + P +Y Q L+ K + + Y+ LDP+ ++
Sbjct: 217 SLGCMLASMIFRKEPFFHGHDNYDQ----LVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 392 PSRKELKR 399
R KR
Sbjct: 273 LGRHSRKR 280
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 32/188 (17%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+E+++N + +Q L+ +L + +D R + + K L Y H I+H ++K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRFYMYE-ILKALDYCHS---MGIMHRDVKPH 160
Query: 286 NILLDH-HWNPKISDVGLAKLHGP--EWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+++DH H ++ D GLA+ + P E+++ + + EL +++ D++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVDYQMYDYSLDMW 216
Query: 343 SFGILIMEIVSGRLPV-----DYSQPQVFLIDWLKSMVAQQKIAYV------LDPKLPEM 391
S G ++ ++ + P +Y Q L+ K + + Y+ LDP+ ++
Sbjct: 217 SLGCMLASMIFRKEPFFHGHDNYDQ----LVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 392 PSRKELKR 399
R KR
Sbjct: 273 LGRHSRKR 280
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 32/188 (17%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+E+++N + +Q L+ +L + +D R + + K L Y H I+H ++K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRFYMYE-ILKALDYCHS---MGIMHRDVKPH 160
Query: 286 NILLDH-HWNPKISDVGLAKLHGP--EWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+++DH H ++ D GLA+ + P E+++ + + EL +++ D++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVDYQMYDYSLDMW 216
Query: 343 SFGILIMEIVSGRLPV-----DYSQPQVFLIDWLKSMVAQQKIAYV------LDPKLPEM 391
S G ++ ++ + P +Y Q L+ K + + Y+ LDP+ ++
Sbjct: 217 SLGCMLASMIFRKEPFFHGHDNYDQ----LVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 392 PSRKELKR 399
R KR
Sbjct: 273 LGRHSRKR 280
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 32/188 (17%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+E+++N + +Q L+ +L + +D R + + K L Y H I+H ++K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRFYMYE-ILKALDYCHS---MGIMHRDVKPH 160
Query: 286 NILLDH-HWNPKISDVGLAKLHGP--EWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+++DH H ++ D GLA+ + P E+++ + + EL +++ D++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVDYQMYDYSLDMW 216
Query: 343 SFGILIMEIVSGRLPV-----DYSQPQVFLIDWLKSMVAQQKIAYV------LDPKLPEM 391
S G ++ ++ + P +Y Q L+ K + + Y+ LDP+ ++
Sbjct: 217 SLGCMLASMIFRKEPFFHGHDNYDQ----LVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 392 PSRKELKR 399
R KR
Sbjct: 273 LGRHSRKR 280
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 69/155 (44%), Gaps = 20/155 (12%)
Query: 211 LVKLFGYCVEGQNRILVYEYIDNG--NLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAY 268
+V+ FG + + + E + L++ + G P+ K+ K L Y
Sbjct: 86 IVQCFGTFITNTDVFIAMELMGTCAEKLKKRMQG------PIPERILGKMTVAIVKALYY 139
Query: 269 LHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK--LHGPEWSISTSCELRNSGYLAE 326
L E + ++H ++K SNILLD K+ D G++ + S C + Y+A
Sbjct: 140 LKE--KHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGC----AAYMAP 193
Query: 327 EL----SGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
E ++ ++DV+S GI ++E+ +G+ P
Sbjct: 194 ERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 32/188 (17%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+E+++N + +Q L+ +L + +D R + + K L Y H I+H ++K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRFYMYE-ILKALDYCHS---MGIMHRDVKPH 160
Query: 286 NILLDH-HWNPKISDVGLAKLHGP--EWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+++DH H ++ D GLA+ + P E+++ + + EL +++ D++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVDYQMYDYSLDMW 216
Query: 343 SFGILIMEIVSGRLPV-----DYSQPQVFLIDWLKSMVAQQKIAYV------LDPKLPEM 391
S G ++ ++ + P +Y Q L+ K + + Y+ LDP+ ++
Sbjct: 217 SLGCMLASMIFRKEPFFHGHDNYDQ----LVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 392 PSRKELKR 399
R KR
Sbjct: 273 LGRHSRKR 280
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 15/186 (8%)
Query: 181 AVKLLMSNSVSEEEDFIEKV---EAIGQVKHKNLVKLFGYCVEGQNRI-LVYEYIDNGNL 236
A+K+L + +++ V + +H L L Y + +R+ V EY + G L
Sbjct: 37 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL 95
Query: 237 QQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPK 296
+ H L + T + L YLH +V+ ++K N++LD + K
Sbjct: 96 --FFH--LSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIK 148
Query: 297 ISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
I+D GL K G + YLA E+ + + D + G+++ E++ GRL
Sbjct: 149 ITDFGLCK-EGISDGATMKTFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRL 206
Query: 357 PVDYSQ 362
P Y+Q
Sbjct: 207 PF-YNQ 211
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 258 IIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA-KLHGPEWSISTSC 316
++ T +G+ YLH + +++H ++K N+ L+ + KI D GLA K+ T C
Sbjct: 147 FMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLC 203
Query: 317 ELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYS 361
N Y+A E+ + + + D++S G ++ ++ G+ P + S
Sbjct: 204 GTPN--YIAPEVLCKKG-HSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 32/188 (17%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+E+++N + +Q L+ +L + +D R + + K L Y H I+H ++K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRFYMYE-ILKALDYCHS---MGIMHRDVKPH 160
Query: 286 NILLDH-HWNPKISDVGLAKLHGP--EWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+++DH H ++ D GLA+ + P E+++ + + EL +++ D++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVDYQMYDYSLDMW 216
Query: 343 SFGILIMEIVSGRLPV-----DYSQPQVFLIDWLKSMVAQQKIAYV------LDPKLPEM 391
S G ++ ++ + P +Y Q L+ K + + Y+ LDP+ ++
Sbjct: 217 SLGCMLASMIFRKEPFFHGHDNYDQ----LVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 392 PSRKELKR 399
R KR
Sbjct: 273 LGRHSRKR 280
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 32/188 (17%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+E+++N + +Q L+ +L + +D R + + K L Y H I+H ++K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRFYMYE-ILKALDYCHS---MGIMHRDVKPH 160
Query: 286 NILLDH-HWNPKISDVGLAKLHGP--EWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+++DH H ++ D GLA+ + P E+++ + + EL +++ D++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVDYQMYDYSLDMW 216
Query: 343 SFGILIMEIVSGRLPV-----DYSQPQVFLIDWLKSMVAQQKIAYV------LDPKLPEM 391
S G ++ ++ + P +Y Q L+ K + + Y+ LDP+ ++
Sbjct: 217 SLGCMLASMIFRKEPFFHGHDNYDQ----LVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 392 PSRKELKR 399
R KR
Sbjct: 273 LGRHSRKR 280
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 32/188 (17%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+E+++N + +Q L+ +L + +D R + + K L Y H I+H ++K
Sbjct: 111 LVFEHVNNTDFKQ-LYQTLTD-----YDIRFYMYE-ILKALDYCHS---MGIMHRDVKPH 160
Query: 286 NILLDH-HWNPKISDVGLAKLHGP--EWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+++DH H ++ D GLA+ + P E+++ + + EL +++ D++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVDYQMYDYSLDMW 216
Query: 343 SFGILIMEIVSGRLPV-----DYSQPQVFLIDWLKSMVAQQKIAYV------LDPKLPEM 391
S G ++ ++ + P +Y Q L+ K + + Y+ LDP+ ++
Sbjct: 217 SLGCMLASMIFRKEPFFHGHDNYDQ----LVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 392 PSRKELKR 399
R KR
Sbjct: 273 LGRHSRKR 280
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 32/188 (17%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+E+++N + +Q L+ +L + +D R + + K L Y H I+H ++K
Sbjct: 110 LVFEHVNNTDFKQ-LYQTLTD-----YDIRFYMYE-ILKALDYCHS---MGIMHRDVKPH 159
Query: 286 NILLDH-HWNPKISDVGLAKLHGP--EWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+++DH H ++ D GLA+ + P E+++ + + EL +++ D++
Sbjct: 160 NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVDYQMYDYSLDMW 215
Query: 343 SFGILIMEIVSGRLPV-----DYSQPQVFLIDWLKSMVAQQKIAYV------LDPKLPEM 391
S G ++ ++ + P +Y Q L+ K + + Y+ LDP+ ++
Sbjct: 216 SLGCMLASMIFRKEPFFHGHDNYDQ----LVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 271
Query: 392 PSRKELKR 399
R KR
Sbjct: 272 LGRHSRKR 279
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 15/186 (8%)
Query: 181 AVKLLMSNSVSEEEDFIEKV---EAIGQVKHKNLVKLFGYCVEGQNRI-LVYEYIDNGNL 236
A+K+L + +++ V + +H L L Y + +R+ V EY + G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL 92
Query: 237 QQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPK 296
+ H L + T + L YLH +V+ ++K N++LD + K
Sbjct: 93 --FFH--LSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIK 145
Query: 297 ISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
I+D GL K G + YLA E+ + + D + G+++ E++ GRL
Sbjct: 146 ITDFGLCK-EGISDGATMKTFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRL 203
Query: 357 PVDYSQ 362
P Y+Q
Sbjct: 204 PF-YNQ 208
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 32/188 (17%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+E+++N + +Q L+ +L + +D R + + K L Y H I+H ++K
Sbjct: 109 LVFEHVNNTDFKQ-LYQTLTD-----YDIRFYMYE-ILKALDYCHS---MGIMHRDVKPH 158
Query: 286 NILLDH-HWNPKISDVGLAKLHGP--EWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+++DH H ++ D GLA+ + P E+++ + + EL +++ D++
Sbjct: 159 NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVDYQMYDYSLDMW 214
Query: 343 SFGILIMEIVSGRLPV-----DYSQPQVFLIDWLKSMVAQQKIAYV------LDPKLPEM 391
S G ++ ++ + P +Y Q L+ K + + Y+ LDP+ ++
Sbjct: 215 SLGCMLASMIFRKEPFFHGHDNYDQ----LVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 270
Query: 392 PSRKELKR 399
R KR
Sbjct: 271 LGRHSRKR 278
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 15/186 (8%)
Query: 181 AVKLLMSNSVSEEEDFIEKV---EAIGQVKHKNLVKLFGYCVEGQNRI-LVYEYIDNGNL 236
A+K+L + +++ V + +H L L Y + +R+ V EY + G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL 92
Query: 237 QQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPK 296
+ H L + T + L YLH +V+ ++K N++LD + K
Sbjct: 93 --FFH--LSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIK 145
Query: 297 ISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
I+D GL K G + YLA E+ + + D + G+++ E++ GRL
Sbjct: 146 ITDFGLCK-EGISDGATMKTFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRL 203
Query: 357 PVDYSQ 362
P Y+Q
Sbjct: 204 PF-YNQ 208
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 88/188 (46%), Gaps = 32/188 (17%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+E+++N + +Q L+ +L + +D R + + K L Y H I+H ++K
Sbjct: 116 LVFEHVNNTDFKQ-LYQTLTD-----YDIRFYMYE-ILKALDYCHS---MGIMHRDVKPH 165
Query: 286 NILLDH-HWNPKISDVGLAKLHGP--EWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+++DH H ++ D GLA+ + P E+++ + + EL +++ D++
Sbjct: 166 NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVDYQMYDYSLDMW 221
Query: 343 SFGILIMEIVSGRLPV-----DYSQPQVFLIDWLKSMVAQQKIAYV------LDPKLPEM 391
S G ++ ++ + P +Y Q L+ K + + Y+ LDP+ ++
Sbjct: 222 SLGCMLASMIFRKEPFFHGHDNYDQ----LVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 277
Query: 392 PSRKELKR 399
R KR
Sbjct: 278 LGRHSRKR 285
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 103/267 (38%), Gaps = 55/267 (20%)
Query: 152 TDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVK 207
T F E I SG+ G V++ V LD A+K ++ SV E+ E +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 208 HKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
H ++V+ F E + ++ EY + G+L + + ++ +GL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-------------------KISDVG-LAKLHG 307
Y+H +VH ++K SNI + P KI D+G + ++
Sbjct: 128 YIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 184
Query: 308 PEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIM----------------EI 351
P+ E +S +LA E+ K+D+++ + ++ EI
Sbjct: 185 PQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEI 238
Query: 352 VSGRLPVDYSQPQVF---LIDWLKSMV 375
GRLP PQV + LK M+
Sbjct: 239 RQGRLP---RIPQVLSQEFTELLKVMI 262
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
++H N+V+ + + +V EY G L + + A + D Q G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFE----RICNAGRFSEDEARFFFQQLISG 127
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNP--KISDVGLAK---LHG-PEWSISTSCELR 319
++Y H ++ H ++K N LLD P KI G +K LH P+ ++ T +
Sbjct: 128 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKSTVGTPAYIA 184
Query: 320 NSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPV-DYSQPQVF 366
L +E G+ + DV+S G+ + ++ G P D +P+ F
Sbjct: 185 PEVLLKKEYDGKVA------DVWSCGVTLYVMLVGAYPFEDPEEPKNF 226
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 103/267 (38%), Gaps = 55/267 (20%)
Query: 152 TDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVK 207
T F E I SG+ G V++ V LD A+K ++ SV E+ E +
Sbjct: 6 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 65
Query: 208 HKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
H ++V+ F E + ++ EY + G+L + + ++ +GL
Sbjct: 66 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-------------------KISDVG-LAKLHG 307
Y+H +VH ++K SNI + P KI D+G + ++
Sbjct: 126 YIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 182
Query: 308 PEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIM----------------EI 351
P+ E +S +LA E+ K+D+++ + ++ EI
Sbjct: 183 PQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVXAAGAEPLPRNGDQWHEI 236
Query: 352 VSGRLPVDYSQPQVF---LIDWLKSMV 375
GRLP PQV + LK M+
Sbjct: 237 RQGRLP---RIPQVLSQEFTELLKVMI 260
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 80/186 (43%), Gaps = 15/186 (8%)
Query: 181 AVKLLMSNSVSEEEDFIEKV---EAIGQVKHKNLVKLFGYCVEGQNRI-LVYEYIDNGNL 236
A+K+L + +++ V + +H L L Y + +R+ V EY + G L
Sbjct: 34 AMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL 92
Query: 237 QQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPK 296
+ H L + T + L YLH +V+ ++K N++LD + K
Sbjct: 93 --FFH--LSRERVFTEERARFYGAEIVSALEYLHSR---DVVYRDIKLENLMLDKDGHIK 145
Query: 297 ISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRL 356
I+D GL K G + YLA E+ + + D + G+++ E++ GRL
Sbjct: 146 ITDFGLCK-EGISDGATMKXFCGTPEYLAPEVL-EDNDYGRAVDWWGLGVVMYEMMCGRL 203
Query: 357 PVDYSQ 362
P Y+Q
Sbjct: 204 PF-YNQ 208
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 206 VKHKNLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAK 264
+H L L Y + +R+ V EY + G L + H L + T +
Sbjct: 67 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIVS 121
Query: 265 GLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYL 324
L YLH +V+ ++K N++LD + KI+D GL K G + YL
Sbjct: 122 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYL 177
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ 362
A E+ + + D + G+++ E++ GRLP Y+Q
Sbjct: 178 APEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQ 213
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 103/267 (38%), Gaps = 55/267 (20%)
Query: 152 TDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVK 207
T F E I SG+ G V++ V LD A+K ++ SV E+ E +
Sbjct: 8 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 67
Query: 208 HKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
H ++V+ F E + ++ EY + G+L + + ++ +GL
Sbjct: 68 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 127
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-------------------KISDVG-LAKLHG 307
Y+H +VH ++K SNI + P KI D+G + ++
Sbjct: 128 YIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 184
Query: 308 PEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIM----------------EI 351
P+ E +S +LA E+ K+D+++ + ++ EI
Sbjct: 185 PQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEI 238
Query: 352 VSGRLPVDYSQPQVF---LIDWLKSMV 375
GRLP PQV + LK M+
Sbjct: 239 RQGRLP---RIPQVLSQEFTELLKVMI 262
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 206 VKHKNLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAK 264
+H L L Y + +R+ V EY + G L + H L + T +
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIVS 116
Query: 265 GLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYL 324
L YLH +V+ ++K N++LD + KI+D GL K G + YL
Sbjct: 117 ALEYLHSR---DVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYL 172
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ 362
A E+ + + D + G+++ E++ GRLP Y+Q
Sbjct: 173 APEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQ 208
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 60/267 (22%), Positives = 103/267 (38%), Gaps = 55/267 (20%)
Query: 152 TDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLL---MSNSVSEEEDFIEKVEAIGQVK 207
T F E I SG+ G V++ V LD A+K ++ SV E+ E +
Sbjct: 10 TTEFHELEKIGSGEFGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQ 69
Query: 208 HKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
H ++V+ F E + ++ EY + G+L + + ++ +GL
Sbjct: 70 HSHVVRYFSAWAEDDHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 129
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-------------------KISDVG-LAKLHG 307
Y+H +VH ++K SNI + P KI D+G + ++
Sbjct: 130 YIH---SMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFKIGDLGHVTRISS 186
Query: 308 PEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIM----------------EI 351
P+ E +S +LA E+ K+D+++ + ++ EI
Sbjct: 187 PQ------VEEGDSRFLANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRNGDQWHEI 240
Query: 352 VSGRLPVDYSQPQVF---LIDWLKSMV 375
GRLP PQV + LK M+
Sbjct: 241 RQGRLP---RIPQVLSQEFTELLKVMI 264
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 12/158 (7%)
Query: 206 VKHKNLVKLFGYCVEGQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAK 264
+H L L Y + +R+ V EY + G L + H L + T +
Sbjct: 62 TRHPFLTAL-KYAFQTHDRLCFVMEYANGGEL--FFH--LSRERVFTEERARFYGAEIVS 116
Query: 265 GLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYL 324
L YLH +V+ ++K N++LD + KI+D GL K G + YL
Sbjct: 117 ALEYLHS---RDVVYRDIKLENLMLDKDGHIKITDFGLCK-EGISDGATMKXFCGTPEYL 172
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ 362
A E+ + + D + G+++ E++ GRLP Y+Q
Sbjct: 173 APEVL-EDNDYGRAVDWWGLGVVMYEMMCGRLPF-YNQ 208
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/188 (22%), Positives = 87/188 (46%), Gaps = 32/188 (17%)
Query: 226 LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSS 285
LV+E+++N + +Q L +L + +D R + + K L Y H I+H ++K
Sbjct: 111 LVFEHVNNTDFKQ-LRQTLTD-----YDIRFYMYE-ILKALDYCHS---MGIMHRDVKPH 160
Query: 286 NILLDH-HWNPKISDVGLAKLHGP--EWSISTSCELRNSGYLAEELSGRTSIFNEKSDVY 342
N+++DH H ++ D GLA+ + P E+++ + + EL +++ D++
Sbjct: 161 NVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRY----FKGPELLVDYQMYDYSLDMW 216
Query: 343 SFGILIMEIVSGRLPV-----DYSQPQVFLIDWLKSMVAQQKIAYV------LDPKLPEM 391
S G ++ ++ + P +Y Q L+ K + + Y+ LDP+ ++
Sbjct: 217 SLGCMLASMIFRKEPFFHGHDNYDQ----LVRIAKVLGTEDLYDYIDKYNIELDPRFNDI 272
Query: 392 PSRKELKR 399
R KR
Sbjct: 273 LGRHSRKR 280
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
++H N+V+ + + +V EY G L + + A + D Q G
Sbjct: 72 LRHPNIVRFKEVILTPTHLAIVMEYASGGELFE----RICNAGRFSEDEARFFFQQLISG 127
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNP--KISDVGLAK---LHG-PEWSISTSCELR 319
++Y H ++ H ++K N LLD P KI G +K LH P+ ++ T +
Sbjct: 128 VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKDTVGTPAYIA 184
Query: 320 NSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPV-DYSQPQVF 366
L +E G+ + DV+S G+ + ++ G P D +P+ F
Sbjct: 185 PEVLLKKEYDGKVA------DVWSCGVTLYVMLVGAYPFEDPEEPKNF 226
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 61/251 (24%), Positives = 110/251 (43%), Gaps = 54/251 (21%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDF----IEKVEAIGQVKHKNLVKLF 215
+ G G VY+A+ + N A+K + EEE I +V + +++H+N+++L
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEH--EEEGVPGTAIREVSLLKELQHRNIIELK 99
Query: 216 GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQG----TAKGLAYLHE 271
L++EY +N +L++++ + P D M++I+ G+ + H
Sbjct: 100 SVIHHNHRLHLIFEYAEN-DLKKYM-----DKNP---DVSMRVIKSFLYQLINGVNFCHS 150
Query: 272 DIEPKIVHHNMKSSNILL---DHHWNP--KISDVGLAKLHG-----------------PE 309
+ +H ++K N+LL D P KI D GLA+ G PE
Sbjct: 151 R---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPE 207
Query: 310 WSI-----STSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQ 364
+ STS ++ + + E+ +T +F S++ I E++ LP D + P
Sbjct: 208 ILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQL-FKIFEVLG--LPDDTTWPG 264
Query: 365 VF-LIDWLKSM 374
V L DW +S
Sbjct: 265 VTALPDWKQSF 275
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 91/203 (44%), Gaps = 30/203 (14%)
Query: 210 NLVKLFGYCVEGQNRI--LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
N+VKL + ++ L++EY++N + + L+ +L + +D R I + K L
Sbjct: 108 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIYE-LLKALD 160
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAKLHGP--EWSISTSCELRNSGYL 324
Y H I+H ++K N+++DH ++ D GLA+ + P E+++ + +
Sbjct: 161 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FK 213
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ---------PQVFLIDWLKSMV 375
EL ++ D++S G + ++ + P Y +V D L + +
Sbjct: 214 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNAYL 273
Query: 376 AQQKIAYVLDPKLPEMPSRKELK 398
+ +I LDP+L + R K
Sbjct: 274 NKYRIE--LDPQLEALVGRHSRK 294
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
+ H+++V G+ + +V E +L + LH K LT ++ G
Sbjct: 78 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHK---RRKALTEPEARYYLRQIVLG 133
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA-KLHGPEWSISTSCELRNSGYL 324
YLH + +++H ++K N+ L+ KI D GLA K+ T C N Y+
Sbjct: 134 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN--YI 188
Query: 325 AEE-LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYS 361
A E LS + F + DV+S G ++ ++ G+ P + S
Sbjct: 189 APEVLSKKGHSF--EVDVWSIGCIMYTLLVGKPPFETS 224
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
+ H+++V G+ + +V E +L + LH K LT ++ G
Sbjct: 74 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHK---RRKALTEPEARYYLRQIVLG 129
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA-KLHGPEWSISTSCELRNSGYL 324
YLH + +++H ++K N+ L+ KI D GLA K+ T C N Y+
Sbjct: 130 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN--YI 184
Query: 325 AEE-LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYS 361
A E LS + F + DV+S G ++ ++ G+ P + S
Sbjct: 185 APEVLSKKGHSF--EVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 72/158 (45%), Gaps = 13/158 (8%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
+ H+++V G+ + +V E +L + LH K LT ++ G
Sbjct: 74 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHK---RRKALTEPEARYYLRQIVLG 129
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA-KLHGPEWSISTSCELRNSGYL 324
YLH + +++H ++K N+ L+ KI D GLA K+ T C N Y+
Sbjct: 130 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN--YI 184
Query: 325 AEE-LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYS 361
A E LS + F + DV+S G ++ ++ G+ P + S
Sbjct: 185 APEVLSKKGHSF--EVDVWSIGCIMYTLLVGKPPFETS 220
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 75/175 (42%), Gaps = 21/175 (12%)
Query: 197 IEKVEAIGQVKHKNLVKLFGYCVEGQNR--ILVYEYIDNGNLQQWLHGSLGEAKPLTWDT 254
+ + E + ++ HKN+VKLF E R +L+ E+ G+L L A L
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESE 113
Query: 255 RMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL----DHHWNPKISDVGLAK-LHGPE 309
+ +++ G+ +L E+ IVH N+K NI+ D K++D G A+ L E
Sbjct: 114 FLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170
Query: 310 WSISTSCELRNSGYLAEELSGRTSI-------FNEKSDVYSFGILIMEIVSGRLP 357
+S YL ++ R + + D++S G+ +G LP
Sbjct: 171 QFVSL---YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
+GL Y+H I+H ++K SN+ ++ +I D GLA+ E + + Y
Sbjct: 134 RGLKYIHS---AGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE----MTGYVATRWY 186
Query: 324 LAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A E+ +N+ D++S G ++ E++ G+
Sbjct: 187 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 258 IIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA-KLHGPEWSISTSC 316
++ T +G+ YLH + +++H ++K N+ L+ + KI D GLA K+ C
Sbjct: 147 FMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLC 203
Query: 317 ELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYS 361
N Y+A E+ + + + D++S G ++ ++ G+ P + S
Sbjct: 204 GTPN--YIAPEVLCKKG-HSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 258 IIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA-KLHGPEWSISTSC 316
++ T +G+ YLH + +++H ++K N+ L+ + KI D GLA K+ C
Sbjct: 131 FMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC 187
Query: 317 ELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYS 361
N Y+A E+ + + + D++S G ++ ++ G+ P + S
Sbjct: 188 GTPN--YIAPEVLCKKG-HSFEVDIWSLGCILYTLLVGKPPFETS 229
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 30/203 (14%)
Query: 210 NLVKLFGYCVEGQNRI--LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
N+VKL + ++ L++EY++N + + L+ +L + +D R I + K L
Sbjct: 89 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIYE-LLKALD 141
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAKLHGP--EWSISTSCELRNSGYL 324
Y H I+H ++K N+++DH ++ D GLA+ + P E+++ + +
Sbjct: 142 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FK 194
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ---------PQVFLIDWLKSMV 375
EL ++ D++S G + ++ + P Y +V D L +
Sbjct: 195 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 254
Query: 376 AQQKIAYVLDPKLPEMPSRKELK 398
+ +I LDP+L + R K
Sbjct: 255 NKYRIE--LDPQLEALVGRHSRK 275
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/221 (22%), Positives = 95/221 (42%), Gaps = 35/221 (15%)
Query: 161 IASGDNGVVYRAV--LLDNMRAAVKLL--MSNSVSEEEDFIEKVEAIGQVKHKNLVKLFG 216
+ G G+V++++ + A K+ NS + F E + H+N+V L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 217 YCVEGQNR--ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIE 274
+R LV++Y++ LH + A L + ++ K + YLH
Sbjct: 77 VLRADNDRDVYLVFDYMETD-----LHAVI-RANILEPVHKQYVVYQLIKVIKYLHSG-- 128
Query: 275 PKIVHHNMKSSNILLDHHWNPKISDVGLAK--------LHGPEWSISTSCE--------- 317
++H +MK SNILL+ + K++D GL++ + SI+ + E
Sbjct: 129 -GLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 318 ---LRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
+ Y A E+ ++ + + D++S G ++ EI+ G+
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGK 228
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 30/203 (14%)
Query: 210 NLVKLFGYCVEGQNRI--LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
N+VKL + ++ L++EY++N + + L+ +L + +D R I + K L
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIYE-LLKALD 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAKLHGP--EWSISTSCELRNSGYL 324
Y H I+H ++K N+++DH ++ D GLA+ + P E+++ + +
Sbjct: 141 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FK 193
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ---------PQVFLIDWLKSMV 375
EL ++ D++S G + ++ + P Y +V D L +
Sbjct: 194 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 253
Query: 376 AQQKIAYVLDPKLPEMPSRKELK 398
+ +I LDP+L + R K
Sbjct: 254 NKYRIE--LDPQLEALVGRHSRK 274
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 30/203 (14%)
Query: 210 NLVKLFGYCVEGQNRI--LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
N+VKL + ++ L++EY++N + + L+ +L + +D R I + K L
Sbjct: 88 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIYE-LLKALD 140
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAKLHGP--EWSISTSCELRNSGYL 324
Y H I+H ++K N+++DH ++ D GLA+ + P E+++ + +
Sbjct: 141 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FK 193
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ---------PQVFLIDWLKSMV 375
EL ++ D++S G + ++ + P Y +V D L +
Sbjct: 194 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 253
Query: 376 AQQKIAYVLDPKLPEMPSRKELK 398
+ +I LDP+L + R K
Sbjct: 254 NKYRIE--LDPQLEALVGRHSRK 274
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 54/105 (51%), Gaps = 7/105 (6%)
Query: 258 IIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA-KLHGPEWSISTSC 316
++ T +G+ YLH + +++H ++K N+ L+ + KI D GLA K+ C
Sbjct: 147 FMRQTIQGVQYLHNN---RVIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLC 203
Query: 317 ELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYS 361
N Y+A E+ + + + D++S G ++ ++ G+ P + S
Sbjct: 204 GTPN--YIAPEVLCKKG-HSFEVDIWSLGCILYTLLVGKPPFETS 245
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 30/203 (14%)
Query: 210 NLVKLFGYCVEGQNRI--LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
N+VKL + ++ L++EY++N + + L+ +L + +D R I + K L
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIYE-LLKALD 139
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAKLHGP--EWSISTSCELRNSGYL 324
Y H I+H ++K N+++DH ++ D GLA+ + P E+++ + +
Sbjct: 140 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FK 192
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ---------PQVFLIDWLKSMV 375
EL ++ D++S G + ++ + P Y +V D L +
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 376 AQQKIAYVLDPKLPEMPSRKELK 398
+ +I LDP+L + R K
Sbjct: 253 NKYRIE--LDPQLEALVGRHSRK 273
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 30/203 (14%)
Query: 210 NLVKLFGYCVEGQNRI--LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
N+VKL + ++ L++EY++N + + L+ +L + +D R I + K L
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIYE-LLKALD 139
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAKLHGP--EWSISTSCELRNSGYL 324
Y H I+H ++K N+++DH ++ D GLA+ + P E+++ + +
Sbjct: 140 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FK 192
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ---------PQVFLIDWLKSMV 375
EL ++ D++S G + ++ + P Y +V D L +
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 376 AQQKIAYVLDPKLPEMPSRKELK 398
+ +I LDP+L + R K
Sbjct: 253 NKYRIE--LDPQLEALVGRHSRK 273
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 30/203 (14%)
Query: 210 NLVKLFGYCVEGQNRI--LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
N+VKL + ++ L++EY++N + + L+ +L + +D R I + K L
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIYE-LLKALD 139
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAKLHGP--EWSISTSCELRNSGYL 324
Y H I+H ++K N+++DH ++ D GLA+ + P E+++ + +
Sbjct: 140 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FK 192
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ---------PQVFLIDWLKSMV 375
EL ++ D++S G + ++ + P Y +V D L +
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 376 AQQKIAYVLDPKLPEMPSRKELK 398
+ +I LDP+L + R K
Sbjct: 253 NKYRIE--LDPQLEALVGRHSRK 273
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 30/203 (14%)
Query: 210 NLVKLFGYCVEGQNRI--LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
N+VKL + ++ L++EY++N + + L+ +L + +D R I + K L
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIYE-LLKALD 139
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAKLHGP--EWSISTSCELRNSGYL 324
Y H I+H ++K N+++DH ++ D GLA+ + P E+++ + +
Sbjct: 140 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FK 192
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ---------PQVFLIDWLKSMV 375
EL ++ D++S G + ++ + P Y +V D L +
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 376 AQQKIAYVLDPKLPEMPSRKELK 398
+ +I LDP+L + R K
Sbjct: 253 NKYRIE--LDPQLEALVGRHSRK 273
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 30/203 (14%)
Query: 210 NLVKLFGYCVEGQNRI--LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
N+VKL + ++ L++EY++N + + L+ +L + +D R I + K L
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIYE-LLKALD 139
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAKLHGP--EWSISTSCELRNSGYL 324
Y H I+H ++K N+++DH ++ D GLA+ + P E+++ + +
Sbjct: 140 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FK 192
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ---------PQVFLIDWLKSMV 375
EL ++ D++S G + ++ + P Y +V D L +
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 376 AQQKIAYVLDPKLPEMPSRKELK 398
+ +I LDP+L + R K
Sbjct: 253 NKYRIE--LDPQLEALVGRHSRK 273
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 46/203 (22%), Positives = 90/203 (44%), Gaps = 30/203 (14%)
Query: 210 NLVKLFGYCVEGQNRI--LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLA 267
N+VKL + ++ L++EY++N + + L+ +L + +D R I + K L
Sbjct: 87 NIVKLLDIVRDQHSKTPSLIFEYVNNTDFKV-LYPTLTD-----YDIRYYIYE-LLKALD 139
Query: 268 YLHEDIEPKIVHHNMKSSNILLDHHWNP-KISDVGLAKLHGP--EWSISTSCELRNSGYL 324
Y H I+H ++K N+++DH ++ D GLA+ + P E+++ + +
Sbjct: 140 YCHSQ---GIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRY----FK 192
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQ---------PQVFLIDWLKSMV 375
EL ++ D++S G + ++ + P Y +V D L +
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGTDGLNVYL 252
Query: 376 AQQKIAYVLDPKLPEMPSRKELK 398
+ +I LDP+L + R K
Sbjct: 253 NKYRIE--LDPQLEALVGRHSRK 273
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/183 (21%), Positives = 75/183 (40%), Gaps = 14/183 (7%)
Query: 181 AVKLLMSNSVSEEED---FIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+KLL + + D F E+ + + +V+LF + + +V EY+ G+L
Sbjct: 104 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLV 163
Query: 238 QWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKI 297
+ P W TA+ + L ++H ++K N+LLD H + K+
Sbjct: 164 NLMSNY---DVPEKWAKFY-----TAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKL 215
Query: 298 SDVGLAKLHGPEWSISTSCELRNSGYLAEEL---SGRTSIFNEKSDVYSFGILIMEIVSG 354
+D G + + Y++ E+ G + + D +S G+ + E++ G
Sbjct: 216 ADFGTCMKMDETGMVHCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVG 275
Query: 355 RLP 357
P
Sbjct: 276 DTP 278
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
+GL Y+H I+H ++K SN+ ++ +I D GLA+ E + + Y
Sbjct: 142 RGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRW----Y 194
Query: 324 LAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A E+ +N+ D++S G ++ E++ G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 46/206 (22%), Positives = 85/206 (41%), Gaps = 26/206 (12%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSE--EEDFIEKVEAIGQVKHKNLVKLFGY 217
+ SG G V AV + A+K L SE + ++ + ++H+N++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDV 92
Query: 218 CVEGQNR--------ILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYL 269
+ ++ + D G L + H LGE D ++ KGL Y+
Sbjct: 93 FTPDETLDDFTDFYLVMPFMGTDLGKLMK--HEKLGE------DRIQFLVYQMLKGLRYI 144
Query: 270 HEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELS 329
H I+H ++K N+ ++ KI D GLA+ E + Y A E+
Sbjct: 145 HA---AGIIHRDLKPGNLAVNEDCELKILDFGLARQADSE----MXGXVVTRWYRAPEVI 197
Query: 330 GRTSIFNEKSDVYSFGILIMEIVSGR 355
+ + D++S G ++ E+++G+
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
KGL Y+H +VH ++K N+ ++ KI D GLA+ E + + Y
Sbjct: 155 KGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWY 207
Query: 324 LAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A E+ +N+ D++S G ++ E+++G+
Sbjct: 208 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
+GL Y+H I+H ++K SN+ ++ +I D GLA+ E + + Y
Sbjct: 142 RGLKYIHS---AGIIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRW----Y 194
Query: 324 LAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A E+ +N+ D++S G ++ E++ G+
Sbjct: 195 RAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/92 (27%), Positives = 46/92 (50%), Gaps = 7/92 (7%)
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGY 323
KGL Y+H +VH ++K N+ ++ KI D GLA+ E + + Y
Sbjct: 137 KGLKYIHS---AGVVHRDLKPGNLAVNEDCELKILDFGLARHADAE----MTGYVVTRWY 189
Query: 324 LAEELSGRTSIFNEKSDVYSFGILIMEIVSGR 355
A E+ +N+ D++S G ++ E+++G+
Sbjct: 190 RAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 181 AVKLLMSNSVSEEED---FIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+KLL + + D F E+ + + +V+LF + + +V EY+ G+L
Sbjct: 103 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 162
Query: 238 QWLHG-SLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPK 296
+ + E + + + + ++H D++P N+LLD + K
Sbjct: 163 NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKP---------DNMLLDKSGHLK 213
Query: 297 ISDVGLAKLHGPEWSISTSCELRNSGYLAEEL---SGRTSIFNEKSDVYSFGILIMEIVS 353
++D G E + + Y++ E+ G + + D +S G+ + E++
Sbjct: 214 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 273
Query: 354 GRLP 357
G P
Sbjct: 274 GDTP 277
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
+ H+++V G+ + +V E +L + LH K LT ++ G
Sbjct: 96 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHK---RRKALTEPEARYYLRQIVLG 151
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA-KLHGPEWSISTSCELRNSGYL 324
YLH + +++H ++K N+ L+ KI D GLA K+ C N Y+
Sbjct: 152 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN--YI 206
Query: 325 AEE-LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYS 361
A E LS + F + DV+S G ++ ++ G+ P + S
Sbjct: 207 APEVLSKKGHSF--EVDVWSIGCIMYTLLVGKPPFETS 242
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 181 AVKLLMSNSVSEEED---FIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+KLL + + D F E+ + + +V+LF + + +V EY+ G+L
Sbjct: 98 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 157
Query: 238 QWLHG-SLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPK 296
+ + E + + + + ++H D++P N+LLD + K
Sbjct: 158 NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKP---------DNMLLDKSGHLK 208
Query: 297 ISDVGLAKLHGPEWSISTSCELRNSGYLAEEL---SGRTSIFNEKSDVYSFGILIMEIVS 353
++D G E + + Y++ E+ G + + D +S G+ + E++
Sbjct: 209 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 268
Query: 354 GRLP 357
G P
Sbjct: 269 GDTP 272
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
+ H+++V G+ + +V E +L + LH K LT ++ G
Sbjct: 98 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHK---RRKALTEPEARYYLRQIVLG 153
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA-KLHGPEWSISTSCELRNSGYL 324
YLH + +++H ++K N+ L+ KI D GLA K+ C N Y+
Sbjct: 154 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN--YI 208
Query: 325 AEE-LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYS 361
A E LS + F + DV+S G ++ ++ G+ P + S
Sbjct: 209 APEVLSKKGHSF--EVDVWSIGCIMYTLLVGKPPFETS 244
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/175 (24%), Positives = 74/175 (42%), Gaps = 21/175 (12%)
Query: 197 IEKVEAIGQVKHKNLVKLFGYCVEGQNR--ILVYEYIDNGNLQQWLHGSLGEAKPLTWDT 254
+ + E + ++ HKN+VKLF E R +L+ E+ G+L L A L
Sbjct: 55 MREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLE-EPSNAYGLPESE 113
Query: 255 RMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL----DHHWNPKISDVGLAK-LHGPE 309
+ +++ G+ +L E+ IVH N+K NI+ D K++D G A+ L E
Sbjct: 114 FLIVLRDVVGGMNHLREN---GIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDE 170
Query: 310 WSISTSCELRNSGYLAEELSGRTSI-------FNEKSDVYSFGILIMEIVSGRLP 357
+ YL ++ R + + D++S G+ +G LP
Sbjct: 171 QFVXL---YGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLP 222
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 37.7 bits (86), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 71/158 (44%), Gaps = 13/158 (8%)
Query: 206 VKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
+ H+++V G+ + +V E +L + LH K LT ++ G
Sbjct: 72 LAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLE-LHK---RRKALTEPEARYYLRQIVLG 127
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA-KLHGPEWSISTSCELRNSGYL 324
YLH + +++H ++K N+ L+ KI D GLA K+ C N Y+
Sbjct: 128 CQYLHRN---RVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPN--YI 182
Query: 325 AEE-LSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYS 361
A E LS + F + DV+S G ++ ++ G+ P + S
Sbjct: 183 APEVLSKKGHSF--EVDVWSIGCIMYTLLVGKPPFETS 218
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 36/184 (19%), Positives = 75/184 (40%), Gaps = 16/184 (8%)
Query: 181 AVKLLMSNSVSEEED---FIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQ 237
A+KLL + + D F E+ + + +V+LF + + +V EY+ G+L
Sbjct: 103 AMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDLV 162
Query: 238 QWLHG-SLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPK 296
+ + E + + + + ++H D++P N+LLD + K
Sbjct: 163 NLMSNYDVPEKWARFYTAEVVLALDAIHSMGFIHRDVKP---------DNMLLDKSGHLK 213
Query: 297 ISDVGLAKLHGPEWSISTSCELRNSGYLAEEL---SGRTSIFNEKSDVYSFGILIMEIVS 353
++D G E + + Y++ E+ G + + D +S G+ + E++
Sbjct: 214 LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLV 273
Query: 354 GRLP 357
G P
Sbjct: 274 GDTP 277
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 37.0 bits (84), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 49/235 (20%), Positives = 100/235 (42%), Gaps = 15/235 (6%)
Query: 142 RISLKEIDIV-TDGFAEQNVIASGDNGVVYRAVLLD-NMRAAVKLL-----MSNSVSEEE 194
R S+ + D++ D + VI G VV R + + + AVK++ S+ E
Sbjct: 14 RGSMADDDVLFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTE 73
Query: 195 DFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDT 254
D + +KH ++V+L +V+E++D +L + +
Sbjct: 74 DLKREASICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 133
Query: 255 RMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLAKLHGPEWS 311
++ + L Y H++ I+H ++K +LL N K+ G+A G E
Sbjct: 134 ASHYMRQILEALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG-ESG 189
Query: 312 ISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVF 366
+ + ++A E+ R + + DV+ G+++ ++SG LP ++ ++F
Sbjct: 190 LVAGGRVGTPHFMAPEVVKREP-YGKPVDVWGCGVILFILLSGCLPFYGTKERLF 243
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 46/226 (20%), Positives = 94/226 (41%), Gaps = 14/226 (6%)
Query: 150 IVTDGFAEQNVIASGDNGVVYRAVLLDN-MRAAVKLL-----MSNSVSEEEDFIEKVEAI 203
+ D + VI G VV R + + + AVK++ S+ ED +
Sbjct: 21 LFEDVYELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASIC 80
Query: 204 GQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTA 263
+KH ++V+L +V+E++D +L + + ++
Sbjct: 81 HMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQIL 140
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLAKLHGPEWSISTSCELRN 320
+ L Y H++ I+H ++K +LL N K+ G+A G E + +
Sbjct: 141 EALRYCHDN---NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLG-ESGLVAGGRVGT 196
Query: 321 SGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVF 366
++A E+ R + + DV+ G+++ ++SG LP ++ ++F
Sbjct: 197 PHFMAPEVVKREP-YGKPVDVWGCGVILFILLSGCLPFYGTKERLF 241
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 36.2 bits (82), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 11/93 (11%)
Query: 262 TAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNS 321
T LA+LH +VH ++K +NI L K+ D GL E + + E++
Sbjct: 166 TLLALAHLHSQ---GLVHLDVKPANIFLGPRGRCKLGDFGLLV----ELGTAGAGEVQEG 218
Query: 322 G--YLAEELSGRTSIFNEKSDVYSFGILIMEIV 352
Y+A EL + +DV+S G+ I+E+
Sbjct: 219 DPRYMAPEL--LQGSYGTAADVFSLGLTILEVA 249
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 59/142 (41%), Gaps = 16/142 (11%)
Query: 223 NRILVYEYIDNGNLQQWL---HGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
N LV +Y G+L L L E + M I + L Y+H DI
Sbjct: 148 NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDI------ 201
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE----LSGRTSIF 335
K NIL+D + + +++D G + ++ +S + Y++ E + G +
Sbjct: 202 ---KPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRY 258
Query: 336 NEKSDVYSFGILIMEIVSGRLP 357
+ D +S G+ + E++ G P
Sbjct: 259 GPECDWWSLGVCMYEMLYGETP 280
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV---- 206
+D + + + G VV R V + A K++ + +S DF +K+E ++
Sbjct: 4 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DF-QKLEREARICRKL 61
Query: 207 KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+H N+V+L E LV++ + G L + + + + IQ + +
Sbjct: 62 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFE----DIVAREFYSEADASHCIQQILESI 117
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLA-KLHGPE-WSISTSCELRNS 321
AY H + IVH N+K N+LL K++D GLA +++ E W
Sbjct: 118 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG----TP 170
Query: 322 GYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
GYL+ E+ + +++ D+++ G+++ ++ G P
Sbjct: 171 GYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPP 205
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 35.4 bits (80), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV---- 206
+D + + + G VV R V + A K++ + +S DF +K+E ++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DF-QKLEREARICRKL 62
Query: 207 KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+H N+V+L E LV++ + G L + + + + IQ + +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFE----DIVAREFYSEADASHCIQQILESI 118
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLA-KLHGPE-WSISTSCELRNS 321
AY H + IVH N+K N+LL K++D GLA +++ E W
Sbjct: 119 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG----TP 171
Query: 322 GYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
GYL+ E+ + +++ D+++ G+++ ++ G P
Sbjct: 172 GYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPP 206
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 35.4 bits (80), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV---- 206
+D + + + G VV R V + A K++ + +S DF +K+E ++
Sbjct: 5 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DF-QKLEREARICRKL 62
Query: 207 KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+H N+V+L E LV++ + G L + + + + IQ + +
Sbjct: 63 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFE----DIVAREFYSEADASHCIQQILESI 118
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLA-KLHGPE-WSISTSCELRNS 321
AY H + IVH N+K N+LL K++D GLA +++ E W
Sbjct: 119 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG----TP 171
Query: 322 GYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
GYL+ E+ + +++ D+++ G+++ ++ G P
Sbjct: 172 GYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPP 206
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/199 (21%), Positives = 85/199 (42%), Gaps = 15/199 (7%)
Query: 161 IASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVE 220
I+ D G +Y +L K + E +E ++ + Y +
Sbjct: 76 ISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLE------HIRQSPFLVTLHYAFQ 129
Query: 221 GQNRI-LVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVH 279
+ ++ L+ +YI+ G L + H L + + T + L +LH+ I++
Sbjct: 130 TETKLHLILDYINGGEL--FTH--LSQRERFTEHEVQIYVGEIVLALEHLHK---LGIIY 182
Query: 280 HNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEEL-SGRTSIFNEK 338
++K NILLD + + ++D GL+K + + Y+A ++ G S ++
Sbjct: 183 RDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIVRGGDSGHDKA 242
Query: 339 SDVYSFGILIMEIVSGRLP 357
D +S G+L+ E+++G P
Sbjct: 243 VDWWSLGVLMYELLTGASP 261
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 50/216 (23%), Positives = 97/216 (44%), Gaps = 24/216 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV---- 206
+D + + + G VV R V + A K++ + +S DF +K+E ++
Sbjct: 28 SDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSAR-DF-QKLEREARICRKL 85
Query: 207 KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
+H N+V+L E LV++ + G L + + + + IQ + +
Sbjct: 86 QHPNIVRLHDSIQEESFHYLVFDLVTGGELFE----DIVAREFYSEADASHCIQQILESI 141
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLA-KLHGPE-WSISTSCELRNS 321
AY H + IVH N+K N+LL K++D GLA +++ E W
Sbjct: 142 AYCHSN---GIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG----TP 194
Query: 322 GYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
GYL+ E+ + +++ D+++ G+++ ++ G P
Sbjct: 195 GYLSPEVLKKDP-YSKPVDIWACGVILYILLVGYPP 229
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 25/176 (14%)
Query: 258 IIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDV--GLAKL-HG------- 307
I+QG K L Y+H VH ++K+S+IL+ +S + L+ + HG
Sbjct: 133 ILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVH 189
Query: 308 --PEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPV-DYSQPQ 364
P++S+ L + L + L G ++ KSD+YS GI E+ +G +P D Q
Sbjct: 190 DFPKYSVKVLPWL-SPEVLQQNLQG----YDAKSDIYSVGITACELANGHVPFKDMPATQ 244
Query: 365 VFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGD 420
+ L ++ + + +L PSR + +L P RP GD
Sbjct: 245 MLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTP----RPSNGD 296
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 76/176 (43%), Gaps = 25/176 (14%)
Query: 258 IIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDV--GLAKL-HG------- 307
I+QG K L Y+H VH ++K+S+IL+ +S + L+ + HG
Sbjct: 117 ILQGVLKALDYIHHM---GYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVH 173
Query: 308 --PEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPV-DYSQPQ 364
P++S+ L + L + L G ++ KSD+YS GI E+ +G +P D Q
Sbjct: 174 DFPKYSVKVLPWL-SPEVLQQNLQG----YDAKSDIYSVGITACELANGHVPFKDMPATQ 228
Query: 365 VFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGD 420
+ L ++ + + +L PSR + +L P RP GD
Sbjct: 229 MLLEKLNGTVPCLLDTSTIPAEELTMSPSRSVANSGLSDSLTTSTP----RPSNGD 280
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
V G + +V+E + + +L +W+ S + PL KIIQ +GL YLH +I+
Sbjct: 99 VNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLP--CVKKIIQQVLQGLDYLHTKC--RII 153
Query: 279 HHNMKSSNILL 289
H ++K NILL
Sbjct: 154 HTDIKPENILL 164
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 49/218 (22%), Positives = 94/218 (43%), Gaps = 25/218 (11%)
Query: 151 VTDGFAEQNVIASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV--- 206
+TD + I G VV R V L A K++ + +S + +K+E ++
Sbjct: 2 MTDEYQLYEDIGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDH--QKLEREARICRL 59
Query: 207 -KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKG 265
KH N+V+L E LV++ + G L + + + + IQ +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIQQILEA 115
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLA-KLHGPE--WSISTSCELR 319
+ + H + +VH ++K N+LL K++D GLA ++ G + W
Sbjct: 116 VLHCH---QMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAG---- 168
Query: 320 NSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
GYL+ E+ R + + D+++ G+++ ++ G P
Sbjct: 169 TPGYLSPEVL-RKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 219 VEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIV 278
V G + +V+E + + +L +W+ S + PL KIIQ +GL YLH +I+
Sbjct: 115 VNGTHICMVFEVLGH-HLLKWIIKSNYQGLPLP--CVKKIIQQVLQGLDYLHTKC--RII 169
Query: 279 HHNMKSSNILL 289
H ++K NILL
Sbjct: 170 HTDIKPENILL 180
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 97/228 (42%), Gaps = 44/228 (19%)
Query: 208 HKNLVKLFGYCVEGQNRILVYEY-IDNGNLQQWLHGSLGEAKPLTWDTR---MKIIQGTA 263
H N+++ YC E +R L + N NLQ + + L + +++ A
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILL--------DHHWNPK-----ISDVGLA-KLHGPE 309
G+A+LH KI+H ++K NIL+ D + ISD GL KL +
Sbjct: 126 SGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 310 WSISTSCELRN----SGYLAEELSGRTSIFNEKS------DVYSFGILIMEIVS-GRLPV 358
S T+ L N SG+ A EL ++ K D++S G + I+S G+ P
Sbjct: 183 SSFRTN--LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 359 --DYSQPQ-----VFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKR 399
YS+ +F +D +K + + IA D + +M LKR
Sbjct: 241 GDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD-LISQMIDHDPLKR 287
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 102/258 (39%), Gaps = 27/258 (10%)
Query: 160 VIASGDNGVVYRA-VLLDNMRAAVKLL----------MSNSVSE--EEDFIEKVEAIGQV 206
++ G G V+ L D ++ A+K++ +S+SV+ E + KV A G
Sbjct: 38 LLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGG-- 95
Query: 207 KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
H +++L + + +LV E Q L + E PL +
Sbjct: 96 GHPGVIRLLDWFETQEGFMLVLE---RPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAI 152
Query: 267 AYLHEDIEPKIVHHNMKSSNILLD-HHWNPKISDVGL-AKLHGPEWSISTSCELRNSGYL 324
+ H +VH ++K NIL+D K+ D G A LH ++ + Y
Sbjct: 153 QHCHSR---GVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEPYTDFDGTRV----YS 205
Query: 325 AEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVL 384
E R + V+S GIL+ ++V G +P + Q + + V+ A +
Sbjct: 206 PPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCALIR 265
Query: 385 DPKLPEMPSRKELKRIIL 402
P+ SR L+ I+L
Sbjct: 266 RCLAPKPSSRPSLEEILL 283
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 33.5 bits (75), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 33/162 (20%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 151 VTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEE----EDFIEKVEAIGQV 206
V D + +++I G G VY A N V + N + E+ + + ++ + ++
Sbjct: 24 VPDNYIIKHLIGRGSYGYVYLAYD-KNTEKNVAIKKVNRMFEDLIDCKRILREITILNRL 82
Query: 207 KHKNLVKLFGYCVEGQ----NRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGT 262
K +++L+ + + + + I + +L++ + LT + I+
Sbjct: 83 KSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFKTPIF----LTEEHIKTILYNL 138
Query: 263 AKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK 304
G ++HE I+H ++K +N LL+ + K+ D GLA+
Sbjct: 139 LLGENFIHES---GIIHRDLKPANCLLNQDCSVKVCDFGLAR 177
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 197 IEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRM 256
+E++ A + +V L+G EG + E ++ G+L Q + + L D +
Sbjct: 98 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK----QMGCLPEDRAL 153
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +GL YLH +I+H ++K+ N+LL
Sbjct: 154 YYLGQALEGLEYLHTR---RILHGDVKADNVLL 183
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 197 IEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRM 256
+E++ A + +V L+G EG + E ++ G+L Q + + L D +
Sbjct: 114 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK----QMGCLPEDRAL 169
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +GL YLH +I+H ++K+ N+LL
Sbjct: 170 YYLGQALEGLEYLHTR---RILHGDVKADNVLL 199
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 33.1 bits (74), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 7/93 (7%)
Query: 197 IEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRM 256
+E++ A + +V L+G EG + E ++ G+L Q + + L D +
Sbjct: 112 VEELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLIK----QMGCLPEDRAL 167
Query: 257 KIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILL 289
+ +GL YLH +I+H ++K+ N+LL
Sbjct: 168 YYLGQALEGLEYLHTR---RILHGDVKADNVLL 197
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 278 VHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE----LSGRTS 333
VH ++K N+LLD + + +++D G + ++ +S + Y++ E +
Sbjct: 197 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 256
Query: 334 IFNEKSDVYSFGILIMEIVSGRLP 357
+ + D +S G+ + E++ G P
Sbjct: 257 KYGPECDWWSLGVCMYEMLYGETP 280
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 32.7 bits (73), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/84 (21%), Positives = 41/84 (48%), Gaps = 4/84 (4%)
Query: 278 VHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEE----LSGRTS 333
VH ++K N+LLD + + +++D G + ++ +S + Y++ E +
Sbjct: 213 VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMG 272
Query: 334 IFNEKSDVYSFGILIMEIVSGRLP 357
+ + D +S G+ + E++ G P
Sbjct: 273 KYGPECDWWSLGVCMYEMLYGETP 296
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 34/161 (21%), Positives = 72/161 (44%), Gaps = 14/161 (8%)
Query: 151 VTDGFAEQNVIASGDNGVVYRAVLLD-NMRAAVKLL--MSNSVSEEEDFIEKVEAIGQVK 207
V D + +++I G G VY A + N A+K + M + + + + ++ + ++K
Sbjct: 26 VPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLK 85
Query: 208 HKNLVKLFGYCVEGQ----NRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTA 263
+++L + + + + I + +L++ + LT I+
Sbjct: 86 SDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF----LTEQHVKTILYNLL 141
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAK 304
G ++HE I+H ++K +N LL+ + KI D GLA+
Sbjct: 142 LGEKFIHES---GIIHRDLKPANCLLNQDCSVKICDFGLAR 179
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 91/206 (44%), Gaps = 21/206 (10%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV----KHKNLVKLF 215
+ G VV R V +L A ++ + +S + +K+E ++ KH N+V+L
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDH--QKLEREARICRLLKHPNIVRLH 76
Query: 216 GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEP 275
E + L+++ + G L + + + + IQ + + + H +
Sbjct: 77 DSISEEGHHYLIFDLVTGGELFE----DIVAREYYSEADASHCIQQILEAVLHCH---QM 129
Query: 276 KIVHHNMKSSNILLDHHWNP---KISDVGLA-KLHGPEWSISTSCELRNSGYLAEELSGR 331
+VH N+K N+LL K++D GLA ++ G + + GYL+ E+ R
Sbjct: 130 GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAG--TPGYLSPEVL-R 186
Query: 332 TSIFNEKSDVYSFGILIMEIVSGRLP 357
+ + D+++ G+++ ++ G P
Sbjct: 187 KDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 44/206 (21%), Positives = 92/206 (44%), Gaps = 21/206 (10%)
Query: 161 IASGDNGVVYRAV-LLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV----KHKNLVKLF 215
+ G VV R V +L A K++ + +S + +K+E ++ KH N+V+L
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDH--QKLEREARICRLLKHPNIVRLH 87
Query: 216 GYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEP 275
E + L+++ + G L + + + + IQ + + + H +
Sbjct: 88 DSISEEGHHYLIFDLVTGGELFE----DIVAREYYSEADASHCIQQILEAVLHCH---QM 140
Query: 276 KIVHHNMKSSNILLDHHWNP---KISDVGLA-KLHGPEWSISTSCELRNSGYLAEELSGR 331
+VH ++K N+LL K++D GLA ++ G + + GYL+ E+ R
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA--GTPGYLSPEVL-R 197
Query: 332 TSIFNEKSDVYSFGILIMEIVSGRLP 357
+ + D+++ G+++ ++ G P
Sbjct: 198 KDPYGKPVDLWACGVILYILLVGYPP 223
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 95/224 (42%), Gaps = 40/224 (17%)
Query: 208 HKNLVKLFGYCVEGQNRIL-VYEYIDNGNLQQWLHGSLGEAKPLTWDTR---MKIIQGTA 263
H N+++ YC E +R L + + N NLQ + + L + +++ A
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILL--------DHHWNPK-----ISDVGLA-KLHGPE 309
G+A+LH KI+H ++K NIL+ D + ISD GL KL +
Sbjct: 144 SGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 310 WSISTSCELRN----SGYLAEELSGRTSI--FNEKSDVYSFGILIMEIVS-GRLPV--DY 360
+ L N SG+ A EL ++ D++S G + I+S G+ P Y
Sbjct: 201 XXFRXN--LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 258
Query: 361 SQPQ-----VFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKR 399
S+ +F +D +K + + IA D + +M LKR
Sbjct: 259 SRESNIIRGIFSLDEMKCLHDRSLIAEATD-LISQMIDHDPLKR 301
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 92/228 (40%), Gaps = 25/228 (10%)
Query: 140 GIRISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSE------- 192
+R + E+ + + Q I+SG G V V + + A+K + N+VS+
Sbjct: 9 AMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVF-NTVSDGRTVNIL 67
Query: 193 EEDFIEK-----VEAIGQVKHKNLVKLFGYCVE----GQNRILVYEYIDNGNLQQWLHGS 243
+ F+ K + + H N++ L V +++ + + +L Q +H
Sbjct: 68 SDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQ 127
Query: 244 LGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA 303
P M I GL LHE +VH ++ NILL + + I D LA
Sbjct: 128 RIVISPQHIQYFMYHI---LLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLA 181
Query: 304 KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEI 351
+ + + + R Y A EL + F + D++S G ++ E+
Sbjct: 182 REDTADANKTHYVTHR--WYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 58/224 (25%), Positives = 94/224 (41%), Gaps = 40/224 (17%)
Query: 208 HKNLVKLFGYCVEGQNRILVYEY-IDNGNLQQWLHGSLGEAKPLTWDTR---MKIIQGTA 263
H N+++ YC E +R L + N NLQ + + L + +++ A
Sbjct: 86 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILL--------DHHWNPK-----ISDVGLA-KLHGPE 309
G+A+LH KI+H ++K NIL+ D + ISD GL KL +
Sbjct: 144 SGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 200
Query: 310 WSISTSCELRN----SGYLAEELSGRTSI--FNEKSDVYSFGILIMEIVS-GRLPV--DY 360
+ L N SG+ A EL ++ D++S G + I+S G+ P Y
Sbjct: 201 XXFRXN--LNNPSGTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY 258
Query: 361 SQPQ-----VFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKR 399
S+ +F +D +K + + IA D + +M LKR
Sbjct: 259 SRESNIIRGIFSLDEMKCLHDRSLIAEATD-LISQMIDHDPLKR 301
>pdb|3P2C|A Chain A, Crystal Structure Of An Exo-Alpha-1,6-Mannosidase
(Bacova_03347) From Bacteroides Ovatus At 1.60 A
Resolution
pdb|3P2C|B Chain B, Crystal Structure Of An Exo-Alpha-1,6-Mannosidase
(Bacova_03347) From Bacteroides Ovatus At 1.60 A
Resolution
Length = 463
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 39/176 (22%), Positives = 70/176 (39%), Gaps = 34/176 (19%)
Query: 183 KLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCV--------------EGQNRILVY 228
+L SN+V +E I +V+ + +K+ L F C +G+ VY
Sbjct: 27 RLFRSNAVEKE---ILRVQKL--LKNAKLAWXFTNCFPNTLDTTVHFRKGSDGKPDTFVY 81
Query: 229 E------YIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNM 282
++ + Q W + L + P + +I K + +I+P + N
Sbjct: 82 TGDIHAXWLRDSGAQVWPYVQLANSDPELKEXLAGVILRQFKCI-----NIDP---YANA 133
Query: 283 KSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEK 338
+ + D HW ++D +LH +W I + C Y + +G SIFNE+
Sbjct: 134 FNDGAIPDGHWXSDLTDXK-PELHERKWEIDSLCYPLRLAYHYWKTTGDASIFNEE 188
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 59/228 (25%), Positives = 95/228 (41%), Gaps = 44/228 (19%)
Query: 208 HKNLVKLFGYCVEGQNRILVYEY-IDNGNLQQWLHGSLGEAKPLTWDTR---MKIIQGTA 263
H N+++ YC E +R L + N NLQ + + L + +++ A
Sbjct: 68 HPNVIRY--YCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 264 KGLAYLHEDIEPKIVHHNMKSSNILL--------DHHWNPK-----ISDVGLA-KLHGPE 309
G+A+LH KI+H ++K NIL+ D + ISD GL KL +
Sbjct: 126 SGVAHLHS---LKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQ 182
Query: 310 WSISTSCELRN----SGYLAEELSGRTSIFNEKS------DVYSFGILIMEIVS-GRLPV 358
+ L N SG+ A EL ++ K D++S G + I+S G+ P
Sbjct: 183 XXFRXN--LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPF 240
Query: 359 --DYSQPQ-----VFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKR 399
YS+ +F +D +K + + IA D + +M LKR
Sbjct: 241 GDKYSRESNIIRGIFSLDEMKCLHDRSLIAEATD-LISQMIDHDPLKR 287
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 51/228 (22%), Positives = 92/228 (40%), Gaps = 25/228 (10%)
Query: 140 GIRISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSE------- 192
+R + E+ + + Q I+SG G V V + + A+K + N+VS+
Sbjct: 9 AMRDLIAELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVF-NTVSDGRTVNIL 67
Query: 193 EEDFIEK-----VEAIGQVKHKNLVKLFGYCVE----GQNRILVYEYIDNGNLQQWLHGS 243
+ F+ K + + H N++ L V +++ + + +L Q +H
Sbjct: 68 SDSFLCKRVLREIRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQ 127
Query: 244 LGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLA 303
P M I GL LHE +VH ++ NILL + + I D LA
Sbjct: 128 RIVISPQHIQYFMYHI---LLGLHVLHE---AGVVHRDLHPGNILLADNNDITICDFNLA 181
Query: 304 KLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEI 351
+ + + + R Y A EL + F + D++S G ++ E+
Sbjct: 182 REDTADANKTHYVTHR--WYRAPELVMQFKGFTKLVDMWSAGCVMAEM 227
>pdb|2W47|A Chain A, Clostridium Thermocellum Cbm35 In Complex With Delta-4,5-
Anhydrogalacturonic Acid
Length = 144
Score = 30.0 bits (66), Expect = 2.6, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 95 IEMNLSKPDL-QFMFSDRWSSGTSTNRCTRAQANGNI-RRSVSGMRLGIRISLKEIDIVT 152
IE N++ P + R+++GT+ NR R NGNI + S+ + G + E IV
Sbjct: 42 IEWNVNAPSSGSYALIFRYANGTTANRPMRITVNGNIVKPSMDFVSTGAWTTWNEAGIVA 101
Query: 153 DGFAEQNVI 161
+ NVI
Sbjct: 102 NLNQGNNVI 110
>pdb|2W1W|A Chain A, Native Structure Of A Family 35 Carbohydrate Binding
Module From Clostridium Thermocellum
pdb|2W1W|B Chain B, Native Structure Of A Family 35 Carbohydrate Binding
Module From Clostridium Thermocellum
Length = 146
Score = 30.0 bits (66), Expect = 2.6, Method: Composition-based stats.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
Query: 95 IEMNLSKPDL-QFMFSDRWSSGTSTNRCTRAQANGNI-RRSVSGMRLGIRISLKEIDIVT 152
IE N++ P + R+++GT+ NR R NGNI + S+ + G + E IV
Sbjct: 42 IEWNVNAPSSGSYALIFRYANGTTANRPMRITVNGNIVKPSMDFVSTGAWTTWNEAGIVA 101
Query: 153 DGFAEQNVI 161
+ NVI
Sbjct: 102 NLNQGNNVI 110
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 28.9 bits (63), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 7/47 (14%)
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPK---ISDVGLAKLHGPE 309
L Y+HE + VH ++K+SN+LL++ NP + D GLA + PE
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYK-NPDQVYLVDYGLAYRYCPE 207
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 28.9 bits (63), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 47/217 (21%), Positives = 92/217 (42%), Gaps = 25/217 (11%)
Query: 152 TDGFAEQNVIASGDNGVVYRAVL-LDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQV---- 206
TD + + G VV R V A K++ + +S + +K+E ++
Sbjct: 30 TDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDH--QKLEREARICRLL 87
Query: 207 KHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGL 266
KH N+V+L E LV++ + G L + + + + I + +
Sbjct: 88 KHPNIVRLHDSISEEGFHYLVFDLVTGGELFE----DIVAREYYSEADASHCIHQILESV 143
Query: 267 AYLHEDIEPKIVHHNMKSSNILLDHHWNP---KISDVGLA-KLHGPE--WSISTSCELRN 320
++H+ IVH ++K N+LL K++D GLA ++ G + W
Sbjct: 144 NHIHQH---DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFGFAG----T 196
Query: 321 SGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLP 357
GYL+ E+ R + + D+++ G+++ ++ G P
Sbjct: 197 PGYLSPEVL-RKDPYGKPVDIWACGVILYILLVGYPP 232
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 28.9 bits (63), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 7/47 (14%)
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPK---ISDVGLAKLHGPE 309
L Y+HE + VH ++K+SN+LL++ NP + D GLA + PE
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYK-NPDQVYLVDYGLAYRYCPE 207
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 28.9 bits (63), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 7/47 (14%)
Query: 266 LAYLHEDIEPKIVHHNMKSSNILLDHHWNPK---ISDVGLAKLHGPE 309
L Y+HE + VH ++K+SN+LL++ NP + D GLA + PE
Sbjct: 165 LEYIHEH---EYVHGDIKASNLLLNYK-NPDQVYLVDYGLAYRYCPE 207
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,653,295
Number of Sequences: 62578
Number of extensions: 547386
Number of successful extensions: 3431
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 537
Number of HSP's successfully gapped in prelim test: 464
Number of HSP's that attempted gapping in prelim test: 1725
Number of HSP's gapped (non-prelim): 1065
length of query: 483
length of database: 14,973,337
effective HSP length: 103
effective length of query: 380
effective length of database: 8,527,803
effective search space: 3240565140
effective search space used: 3240565140
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)