Citrus Sinensis ID: 046972

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480---
MSSSLKHKLSKHTSFFGIPLWILIVTLTLLFLLIFIAILFLYIFIFHRRKKSYINAHFRLPKNPISPKNHVHPHNTFSTSSLDRRLLSCNTMSEIEMNLSKPDLQFMFSDRWSSGTSTNRCTRAQANGNIRRSVSGMRLGIRISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHNYPQKNKTAVLCDADISTHDEENRAHEPDHENPPWKKF
ccccHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccHccccccccccccccccccccccccccccccccccccccccccccccccECHHHHHHHHcccccccccccccccEEEEEEEccccEEEEEEccccccccHHHHHHHHHHHHHccccccccEEEEEEcccEEEEEEEccccccHHHHHcccccccccccHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccccHHHHHHHHHHHcccccccccccccccccHHHHHHHHHHHHHHccccccccccHHHHHHHHcccccHHHHHHHHHcccccccccccccccccccccccccccccccccccccccccccc
*********SKHTSFFGIPLWILIVTLTLLFLLIFIAILFLYIFIFHRRK************************************************************************************SGMRLGIRISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDL*****************************************************
xxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
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MSSSLKHKLSKHTSFFGIPLWILIVTLTLLFLLIFIAILFLYIFIFHRRKKSYINAHFRLPKNPISPKNHVHPHNTFSTSSLDRRLLSCNTMSEIEMNLSKPDLQFMFSDRWSSGTSTNRCTRAQANGNIRRSVSGMRLGIRISLKEIDIVTDGFAEQNVIASGDNGVVYRAVLLDNMRAAVKLLMSNSVSEEEDFIEKVEAIGQVKHKNLVKLFGYCVEGQNRILVYEYIDNGNLQQWLHGSLGEAKPLTWDTRMKIIQGTAKGLAYLHEDIEPKIVHHNMKSSNILLDHHWNPKISDVGLAKLHGPEWSISTSCELRNSGYLAEELSGRTSIFNEKSDVYSFGILIMEIVSGRLPVDYSQPQVFLIDWLKSMVAQQKIAYVLDPKLPEMPSRKELKRIILIALRCVDPDIKHRPKMGDVLRMLEPRDLLLREEYRIKRAASYHNYPQKNKTAVLCDADISTHDEENRAHEPDHENPPWKKF

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
Probable serine/threonine-protein kinase At1g01540 probableQ3EDL4

Prediction of Enzyme Commission Number ?

No confident prediction of EC number!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3VHE, chain A
Confidence level:very confident
Coverage over the Query: 247-427
View the alignment between query and template
View the model in PyMOL
Template: 3UIM, chain A
Confidence level:very confident
Coverage over the Query: 141-429
View the alignment between query and template
View the model in PyMOL
Template: 4APC, chain A
Confidence level:confident
Coverage over the Query: 153-366,378-445
View the alignment between query and template
View the model in PyMOL
Template: 2KNC, chain A
Confidence level:probable
Coverage over the Query: 16-51
View the alignment between query and template
View the model in PyMOL