BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046987
MSWWWAGAIGAAKKKLGEDDERNVGLVIGVTGILGNSLAEILPRPDTPGGPWKVYGVARR
PRPHWNADHPIEYIQCDVSDPQQTQTKLSQLTDVTHIFYTTWASSPTEVENCQINGAMLR
NVLHS

High Scoring Gene Products

Symbol, full name Information P value
VEP1
AT4G24220
protein from Arabidopsis thaliana 1.9e-35
AT5G58750 protein from Arabidopsis thaliana 1.7e-08
PSPPH_2587
Aldo-keto reductase family protein
protein from Pseudomonas syringae pv. phaseolicola 1448A 3.8e-07
PSPTO_2695
Uncharacterized protein
protein from Pseudomonas syringae pv. tomato str. DC3000 3.8e-07

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046987
        (125 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2135932 - symbol:VEP1 "VEIN PATTERNING 1" spec...   383  1.9e-35   1
TAIR|locus:2178793 - symbol:AT5G58750 species:3702 "Arabi...   136  1.7e-08   1
UNIPROTKB|Q48IK0 - symbol:PSPPH_2587 "Aldo-keto reductase...   123  3.8e-07   1
UNIPROTKB|Q882D3 - symbol:PSPTO_2695 "Uncharacterized pro...   123  3.8e-07   1


>TAIR|locus:2135932 [details] [associations]
            symbol:VEP1 "VEIN PATTERNING 1" species:3702 "Arabidopsis
            thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
            [GO:0009611 "response to wounding" evidence=IEP] [GO:0010051 "xylem
            and phloem pattern formation" evidence=IMP] [GO:0008202 "steroid
            metabolic process" evidence=IDA] [GO:0035671 "enone reductase
            activity" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
            InterPro:IPR016040 GO:GO:0005829 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0009611 GO:GO:0000166
            Gene3D:3.40.50.720 GO:GO:0008202 GO:GO:0010051 EMBL:AL161561
            GO:GO:0047787 EMBL:AL078637 UniGene:At.71005 GO:GO:0035671
            EMBL:X99793 EMBL:EF579963 EMBL:AY062451 EMBL:BT008479 EMBL:AY087323
            IPI:IPI00524911 IPI:IPI00540048 IPI:IPI00846354 PIR:T09885
            RefSeq:NP_001078438.1 RefSeq:NP_194153.1 UniGene:At.32364
            ProteinModelPortal:Q9STX2 SMR:Q9STX2 PRIDE:Q9STX2
            EnsemblPlants:AT4G24220.1 GeneID:828523 KEGG:ath:AT4G24220
            TAIR:At4g24220 eggNOG:NOG46937 HOGENOM:HOG000216741
            InParanoid:Q9STX2 OMA:GLKHYLG PhylomeDB:Q9STX2
            ProtClustDB:CLSN2685402 BioCyc:ARA:AT4G24220-MONOMER
            BioCyc:MetaCyc:AT4G24220-MONOMER Genevestigator:Q9STX2
            Uniprot:Q9STX2
        Length = 388

 Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
 Identities = 67/90 (74%), Positives = 77/90 (85%)

Query:    36 NSLAEILPRPDTPGGPWKVYGVARRPRPHWNADHPIEYIQCDVSDPQQTQTKLSQLTDVT 95
             NSLAEILP  DTPGGPWKVYGVARRPRP WNADHPI+YIQCDVSD + T++KLS LTDVT
Sbjct:    40 NSLAEILPLSDTPGGPWKVYGVARRPRPTWNADHPIDYIQCDVSDAEDTRSKLSPLTDVT 99

Query:    96 HIFYTTWASSPTEVENCQINGAMLRNVLHS 125
             H+FY TW +  +E ENC+ NG+MLRNVL +
Sbjct:   100 HVFYVTWTNRESESENCEANGSMLRNVLQA 129


>TAIR|locus:2178793 [details] [associations]
            symbol:AT5G58750 species:3702 "Arabidopsis thaliana"
            [GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005575
            "cellular_component" evidence=ND] InterPro:IPR016040 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0000166 Gene3D:3.40.50.720
            EMBL:AB020755 eggNOG:NOG46937 HOGENOM:HOG000216741
            ProtClustDB:CLSN2685402 EMBL:BT029538 IPI:IPI00518638
            RefSeq:NP_200683.1 UniGene:At.50537 ProteinModelPortal:Q9LUY6
            IntAct:Q9LUY6 PaxDb:Q9LUY6 PRIDE:Q9LUY6 EnsemblPlants:AT5G58750.1
            GeneID:835989 KEGG:ath:AT5G58750 TAIR:At5g58750 InParanoid:Q9LUY6
            OMA:FTWKEIW PhylomeDB:Q9LUY6 Genevestigator:Q9LUY6 Uniprot:Q9LUY6
        Length = 386

 Score = 136 (52.9 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 29/79 (36%), Positives = 46/79 (58%)

Query:    48 PGGPWKVYGVARRPRPHWNADHPIEYIQCDVSDPQQTQTKLSQLTD-VTHIFYTTWASS- 105
             PG  W++YGVAR P  + +      +I CD+ +  +T+ +LS L D V+H+F+ TW+   
Sbjct:    41 PG--WRIYGVARNPEIN-SMTKMYNFISCDLLNASETKQRLSPLQDIVSHVFWVTWSGEF 97

Query:   106 PTEVENCQI-NGAMLRNVL 123
             P + + C + N  ML N L
Sbjct:    98 PLDTDECCVQNKTMLMNAL 116


>UNIPROTKB|Q48IK0 [details] [associations]
            symbol:PSPPH_2587 "Aldo-keto reductase family protein"
            species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
            [GO:0003824 "catalytic activity" evidence=ISS] [GO:0008152
            "metabolic process" evidence=ISS] InterPro:IPR016040 GO:GO:0003824
            GO:GO:0000166 Gene3D:3.40.50.720 EMBL:CP000058
            GenomeReviews:CP000058_GR eggNOG:NOG46937 HOGENOM:HOG000216741
            OMA:GLKHYLG RefSeq:YP_274781.1 ProteinModelPortal:Q48IK0
            STRING:Q48IK0 GeneID:3558882 KEGG:psp:PSPPH_2587 PATRIC:19974469
            ProtClustDB:CLSK903511 Uniprot:Q48IK0
        Length = 353

 Score = 123 (48.4 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 26/72 (36%), Positives = 41/72 (56%)

Query:    52 WKVYGVARRPRPHWNADHPIEYIQCDVSDPQQTQTKLSQLTDVTHIFYTTWASSPTEVEN 111
             W+V  ++R P    +A   +  +  D+ +P+     L+ L   TH+F TTW+   TE EN
Sbjct:    27 WQVAALSRSP----SARPGVIPVAADLQNPKSVSAALADLKP-THVFITTWSRQATEAEN 81

Query:   112 CQINGAMLRNVL 123
              ++N AM+RNVL
Sbjct:    82 IRVNAAMVRNVL 93


>UNIPROTKB|Q882D3 [details] [associations]
            symbol:PSPTO_2695 "Uncharacterized protein" species:223283
            "Pseudomonas syringae pv. tomato str. DC3000" [GO:0003674
            "molecular_function" evidence=ND] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008150 "biological_process" evidence=ND]
            InterPro:IPR016040 GO:GO:0000166 Gene3D:3.40.50.720 EMBL:AE016853
            GenomeReviews:AE016853_GR eggNOG:NOG46937 HOGENOM:HOG000216741
            OMA:GLKHYLG ProtClustDB:CLSK903511 RefSeq:NP_792502.1
            ProteinModelPortal:Q882D3 GeneID:1184349 KEGG:pst:PSPTO_2695
            PATRIC:19996730 BioCyc:PSYR223283:GJIX-2742-MONOMER Uniprot:Q882D3
        Length = 353

 Score = 123 (48.4 bits), Expect = 3.8e-07, P = 3.8e-07
 Identities = 28/73 (38%), Positives = 40/73 (54%)

Query:    52 WKVYGVARRPRPHWNADHP-IEYIQCDVSDPQQTQTKLSQLTDVTHIFYTTWASSPTEVE 110
             W+V  ++R P     +  P +  +  D+ DP      L+ L   THIF TTW+   TE E
Sbjct:    27 WQVAALSRSP-----STRPGVIPVAADLQDPASVTAALADLRP-THIFITTWSRQATEAE 80

Query:   111 NCQINGAMLRNVL 123
             N ++N AM+RNVL
Sbjct:    81 NIRVNAAMVRNVL 93


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.131   0.420    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      125        98   0.00091  102 3  11 23  0.44    30
                                                     29  0.45    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  578 (61 KB)
  Total size of DFA:  138 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.63u 0.12s 10.75t   Elapsed:  00:00:00
  Total cpu time:  10.64u 0.12s 10.76t   Elapsed:  00:00:00
  Start:  Fri May 10 10:19:18 2013   End:  Fri May 10 10:19:18 2013

Back to top