Citrus Sinensis ID: 046991

Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610--
MELPVRAPVSGSRKALCRLETKNLSYKLCSKFDEFNWVYCGVTSKKDPKFILKDVSCEARPGEITAIAGPSGAGKTTLLEILAGKISSRKVSGKLLVNDRPMDAEHFRRISGYVTQDDALFPLLTVEETLMCSALLRLTAGRRKQAASRVRGLLKELGLDHVASSRIGGGSSNCGISGGERRRASIGVDLVHDPAVVLIDEPTSGLDSASALHVVTLLKSMVVNQGKTIILTIHQPGFRILELFDRLVLLSNGFVVHNGTLNHLEERLKSAGHCIPRHVNVLEFAIDVIESFVIQTSETLKTANDKDDLKLRVAYSNNFEEKRKLLSYPNSHVQEVLILGQRFCYNIFRTNQLFATRVIQALVAGFVLGTIYLKVGNNTGQVALQTRIGFFAFSLTFLLSSTTEGLPIFLQERRILMRETSRGAYRASSYVLSNTLIFIPFLLMVGLLFTTPVYWLIGLRRQVDGFLFFSLVVWMVLLMSNSFVACFSALVPNFIMGTSVISGLMGSFFLFSGYFISKDKIPDYWIFMHYLSMFKYPFECFLINEYGGEQGKTRCLEFEEGECSLYGNGFLKQQDLRESQKWSNLAVMLSFIIGYRVLCFFILWCRCYRARK
ccccccccccccccccEEEEEEEEEEEEEccccccccccccccccccccccccccEEEECccCEEEEEccccccHHHHHHHHHcccccccEEEEEEEcccccccHHHcccccEEEccccccccccHHHHHHHHHccccccccHHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHHHHccccEEEEccccccHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHEEEccccEEEEcccccHHHHHHHccccccccccHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHccccccccHHcHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHcccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
**************ALCRLETKNLSYKLCSKFDEFNWVYCGVTSKKDPKFILKDVSCEARPGEITAIAGPSGAGKTTLLEILAGKISSRKVSGKLLVNDRPMDAEHFRRISGYVTQDDALFPLLTVEETLMCSALLRLTA*********VRGLLKELGLDHVASSRIGGGSSNCGISGGERRRASIGVDLVHDPAVVLIDEPTSGLDSASALHVVTLLKSMVVNQGKTIILTIHQPGFRILELFDRLVLLSNGFVVHNGTLNHLEERLKSAGHCIPRHVNVLEFAIDVIESFVIQTSETLKTANDKDDLKLRVAYSNNFEEKRKLLSYPNSHVQEVLILGQRFCYNIFRTNQLFATRVIQALVAGFVLGTIYLKVGNNTGQVALQTRIGFFAFSLTFLLSSTTEGLPIFLQERRILMRETSRGAYRASSYVLSNTLIFIPFLLMVGLLFTTPVYWLIGLRRQVDGFLFFSLVVWMVLLMSNSFVACFSALVPNFIMGTSVISGLMGSFFLFSGYFISKDKIPDYWIFMHYLSMFKYPFECFLINEYGGEQGKTRCLEFEEGECSLYGNGFLKQQDLRESQKWSNLAVMLSFIIGYRVLCFFILWCRCYRA**
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHHxxxxxxHHHHHHHHHHHHHHHHHHHHHHHxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxHHHHHHHHHHHHHHHHHHHHHxxxxxxx
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MELPVRAPVSGSRKALCRLETKNLSYKLCSKFDEFNWVYCGVTSKKDPKFILKDVSCEARPGEITAIAGPSGAGKTTLLEILAGKISSRKVSGKLLVNDRPMDAEHFRRISGYVTQDDALFPLLTVEETLMCSALLRLTAGRRKQAASRVRGLLKELGLDHVASSRIGGGSSNCGISGGERRRASIGVDLVHDPAVVLIDEPTSGLDSASALHVVTLLKSMVVNQGKTIILTIHQPGFRILELFDRLVLLSNGFVVHNGTLNHLEERLKSAGHCIPRHVNVLEFAIDVIESFVIQTSETLKTANDKDDLKLRVAYSNNFEEKRKLLSYPNSHVQEVLILGQRFCYNIFRTNQLFATRVIQALVAGFVLGTIYLKVGNNTGQVALQTRIGFFAFSLTFLLSSTTEGLPIFLQERRILMRETSRGAYRASSYVLSNTLIFIPFLLMVGLLFTTPVYWLIGLRRQVDGFLFFSLVVWMVLLMSNSFVACFSALVPNFIMGTSVISGLMGSFFLFSGYFISKDKIPDYWIFMHYLSMFKYPFECFLINEYGGEQGKTRCLEFEEGECSLYGNGFLKQQDLRESQKWSNLAVMLSFIIGYRVLCFFILWCRCYRARK

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
ABC transporter G family member 10 probableQ9MAH4
Protein white Part of a membrane-spanning permease system necessary for the transport of pigment precursors into pigment cells responsible for eye color. White dimerize with brown for the transport of guanine. Scarlet and white complex transports a metabolic intermediate (such as 3-hydroxy kynurenine) from the cytoplasm into the pigment granules.probableP10090
ATP-binding cassette sub-family G member 4 May be involved in macrophage lipid homeostasis.probableQ9H172

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!

Spatial Structural Prediction

Structural Models Based on Templates

Template: 3G5U, chain A
Confidence level:very confident
Coverage over the Query: 17-30,46-266
View the alignment between query and template
View the model in PyMOL
Template: 2IXF, chain A
Confidence level:probable
Coverage over the Query: 7-158,171-267
View the alignment between query and template
View the model in PyMOL
Template: 1VCI, chain A
Confidence level:probable
Coverage over the Query: 60-286
View the alignment between query and template
View the model in PyMOL