Query Summary

Your job contains 1 sequence.

Parameters

Threshold: 0.001

Maximum number of alignments shown: 100

BLAST filter: on

Query Sequence

>047005
MACSTVLRCVFLTESYRPLHRHNRALFSLPLTTVGSTPLTRLICINYGRIRARNFHSARR
IHLNCSHNESQSPSADDSDQGPPQEAVLKAISEVSKTEGRVGQTTNVVIGGTVADDSTNE
WLALDRKVNSYPTVRGFTAIGSGGDDFVQAMVVAVESVIQKPIPEGRVKQKVSSRGKYVS
VNIGPVQVSS

High Scoring Gene Products

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  047005
        (190 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:505006149 - symbol:AT1G27385 "AT1G27385" speci...   509  8.5e-49   1


>TAIR|locus:505006149 [details] [associations]
            symbol:AT1G27385 "AT1G27385" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] EMBL:CP002684 InterPro:IPR007454
            Pfam:PF04359 IPI:IPI00938915 RefSeq:NP_001154374.1 UniGene:At.41084
            ProteinModelPortal:F4HSW0 SMR:F4HSW0 PRIDE:F4HSW0
            EnsemblPlants:AT1G27385.4 GeneID:839628 KEGG:ath:AT1G27385
            OMA:MACKTIL ArrayExpress:F4HSW0 Uniprot:F4HSW0
        Length = 254

 Score = 509 (184.2 bits), Expect = 8.5e-49, P = 8.5e-49
 Identities = 117/196 (59%), Positives = 138/196 (70%)

Query:     1 MACSTVLRCVFLTESYRPLHRHNRALFSLPLTTV-----GSTPLTRLICIN-YGRIRARN 54
             MAC T+LR VF++ES R      R  F LP +       G  P  + +C N +  +  R 
Sbjct:     1 MACKTILRSVFVSESRRTSGA--RRCFFLPPSPASVPVHGLFPAPKSLCFNGFASVPER- 57

Query:    55 FHSARRIHLNCSHNESQSPSADDSDQGPPQEAVLKAISEVSKTEGRVGQTTNVVIGGTVA 114
                A R  LNCSHN       D SDQGPPQEAVLKAIS VSKT+GRVG+TTN++IGGTVA
Sbjct:    58 ---ATR--LNCSHN-------DQSDQGPPQEAVLKAIS-VSKTDGRVGKTTNMIIGGTVA 104

Query:   115 DDSTNEWLALDRKVNSYPTVRGFTAIGSGGDDFVQAMVVAVESVIQKPIPEGRVKQKVSS 174
             DDS  +WL LD+KVN+YPT RGFTAIG+GG+DFV AMVVAVESVI + IPE  VKQ +SS
Sbjct:   105 DDSAKDWLELDQKVNTYPTERGFTAIGTGGNDFVHAMVVAVESVIDRQIPEDCVKQTLSS 164

Query:   175 RGKYVSVNIGPVQVSS 190
             +GKYVSVNIGP+QV S
Sbjct:   165 KGKYVSVNIGPIQVVS 180


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.317   0.131   0.380    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      190       190   0.00091  110 3  11 22  0.47    32
                                                     31  0.42    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  591 (63 KB)
  Total size of DFA:  153 KB (2092 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  19.16u 0.23s 19.39t   Elapsed:  00:00:01
  Total cpu time:  19.16u 0.23s 19.39t   Elapsed:  00:00:01
  Start:  Mon May 20 23:11:16 2013   End:  Mon May 20 23:11:17 2013

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