Query 047013
Match_columns 781
No_of_seqs 465 out of 3104
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 11:30:28 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/047013.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/047013hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3i6s_A Subtilisin-like proteas 100.0 4E-119 2E-123 1044.3 51.2 630 115-781 1-645 (649)
2 3vta_A Cucumisin; subtilisin-l 100.0 4E-109 1E-113 964.9 50.9 614 115-780 1-619 (621)
3 1xf1_A C5A peptidase, SCP; hyd 100.0 4.2E-81 1.4E-85 757.2 44.8 540 133-780 7-605 (926)
4 3afg_A Subtilisin-like serine 100.0 1.1E-60 3.6E-65 546.3 38.7 369 25-635 33-419 (539)
5 2z2z_A TK-subtilisin precursor 100.0 3.4E-58 1.2E-62 509.4 19.9 345 27-634 2-392 (395)
6 3t41_A Epidermin leader peptid 100.0 6.6E-56 2.2E-60 503.8 27.2 336 71-635 66-466 (471)
7 2p4e_P Proprotein convertase s 100.0 3.7E-58 1.3E-62 526.7 7.7 339 29-600 77-422 (692)
8 1r6v_A Subtilisin-like serine 100.0 5.1E-54 1.7E-58 496.2 27.2 379 25-645 29-450 (671)
9 1y9z_A Alkaline serine proteas 100.0 1.9E-54 6.4E-59 486.3 21.8 381 133-655 14-437 (441)
10 1gci_A Subtilisin; hydrolase, 100.0 4.2E-52 1.4E-56 435.9 20.6 256 133-633 14-269 (269)
11 4h6x_A Thiazoline oxidase/subt 100.0 1.1E-53 3.6E-58 466.7 8.6 308 133-633 21-337 (357)
12 1r0r_E Subtilisin carlsberg; h 100.0 3.3E-52 1.1E-56 438.4 19.0 257 133-633 14-274 (274)
13 1dbi_A AK.1 serine protease; h 100.0 1.1E-51 3.6E-56 435.7 22.1 259 133-633 21-279 (280)
14 1to2_E Subtilisin BPN'; serine 100.0 2.1E-51 7.1E-56 433.7 20.3 259 133-634 14-276 (281)
15 1thm_A Thermitase; hydrolase(s 100.0 6E-51 2.1E-55 430.0 21.9 258 133-633 21-278 (279)
16 2x8j_A Intracellular subtilisi 100.0 1.6E-51 5.4E-56 443.8 17.5 265 133-634 31-311 (327)
17 3zxy_A Subtilisin-like protein 100.0 3.7E-51 1.3E-55 433.2 15.6 266 139-633 3-274 (282)
18 2ixt_A 36KDA protease; serine 100.0 5.4E-50 1.9E-54 430.2 22.8 281 133-628 16-309 (310)
19 2z30_A TK-subtilisin; thermoco 100.0 2.6E-50 8.7E-55 433.9 16.1 265 133-634 18-317 (320)
20 4h6w_A N-terminal cyanobactin 100.0 3.1E-50 1E-54 431.7 15.2 273 133-634 11-288 (306)
21 2iy9_A SUBA; toxin, shiga, pla 100.0 6.5E-50 2.2E-54 436.4 15.1 270 133-634 33-329 (347)
22 3lxu_X Tripeptidyl-peptidase 2 100.0 1.8E-48 6.2E-53 467.2 27.4 357 222-781 267-653 (1354)
23 3lpc_A APRB2; protease, subtil 100.0 3.2E-49 1.1E-53 430.0 17.1 301 133-635 22-338 (340)
24 1sh7_A Extracellular subtilisi 100.0 4.3E-48 1.5E-52 408.4 22.6 235 133-600 19-256 (284)
25 1wmd_A Protease; alpha-beta hy 100.0 2.6E-48 9E-53 436.0 19.8 294 133-635 11-319 (434)
26 2b6n_A Proteinase K; S binding 100.0 1.5E-47 5.3E-52 403.7 22.3 237 133-600 21-260 (278)
27 4dzt_A Aqualysin-1, aqualysin- 100.0 9.3E-48 3.2E-52 405.6 20.6 236 133-601 21-259 (276)
28 2pwa_A Proteinase K; structure 100.0 1.6E-47 5.4E-52 403.1 18.5 240 135-628 24-271 (279)
29 2oxa_A Extracellular serine pr 100.0 3.4E-46 1.1E-50 434.8 25.3 301 132-640 59-431 (600)
30 1p8j_A Furin precursor; prohor 100.0 6.9E-47 2.4E-51 428.0 18.4 293 133-638 28-334 (471)
31 3f7m_A Alkaline serine proteas 100.0 3.6E-46 1.2E-50 394.1 18.0 230 133-600 23-260 (279)
32 2qtw_B Proprotein convertase s 100.0 5E-46 1.7E-50 415.9 19.0 243 134-600 17-270 (546)
33 2id4_A Kexin; KEX2, kexin, fur 100.0 7.8E-46 2.7E-50 422.1 17.7 284 133-637 44-345 (503)
34 3hjr_A Extracellular serine pr 100.0 8.7E-44 3E-48 416.1 25.5 322 132-638 59-429 (600)
35 1t1e_A Kumamolisin; proenzyme, 99.9 3E-25 1E-29 253.1 5.8 97 252-356 273-383 (552)
36 1ga6_A Serine-carboxyl protein 99.8 8.4E-22 2.9E-26 214.1 9.2 100 254-357 90-207 (372)
37 3edy_A Tripeptidyl-peptidase 1 99.0 2.7E-10 9.1E-15 129.0 6.3 99 253-356 261-374 (544)
38 2w2n_P Proprotein convertase s 98.9 1.2E-09 4.1E-14 97.5 7.4 79 25-113 35-113 (114)
39 3cnq_P Subtilisin BPN'; unclea 98.8 2.1E-08 7.1E-13 83.7 9.8 74 25-117 6-79 (80)
40 2qtw_A Proprotein convertase s 98.6 5.2E-08 1.8E-12 87.9 7.5 78 26-113 46-123 (124)
41 1v5i_B POIA1, IA-1=serine prot 98.6 1.1E-07 3.6E-12 78.3 8.5 70 28-113 3-75 (76)
42 3icu_A E3 ubiquitin-protein li 98.5 5.1E-07 1.7E-11 87.4 11.5 93 405-497 82-187 (194)
43 2z30_B TK-subtilisin; thermoco 97.5 0.00025 8.6E-09 56.0 6.7 46 67-113 19-64 (65)
44 2ek8_A Aminopeptidase; metallo 96.3 0.008 2.7E-07 66.2 8.9 73 412-484 106-182 (421)
45 2ys4_A Hydrocephalus-inducing 96.0 0.031 1.1E-06 49.9 9.6 80 685-775 32-113 (122)
46 3iib_A Peptidase M28; YP_92679 95.4 0.037 1.3E-06 61.2 9.2 81 416-496 124-226 (444)
47 3fed_A Glutamate carboxypeptid 94.9 0.021 7E-07 66.6 5.6 70 416-485 150-268 (707)
48 3kas_A Transferrin receptor pr 94.4 0.037 1.3E-06 63.8 5.9 68 417-484 128-230 (640)
49 3qbt_B Inositol polyphosphate 91.5 1.4 4.9E-05 40.0 11.0 96 684-780 33-137 (140)
50 2e6j_A Hydin protein; PAPD, st 91.4 0.26 8.9E-06 42.9 5.7 67 680-747 12-80 (112)
51 1y9z_A Alkaline serine proteas 89.1 0.26 9E-06 54.3 4.4 37 498-542 176-212 (441)
52 3lxu_X Tripeptidyl-peptidase 2 87.0 0.43 1.5E-05 58.7 4.7 25 139-163 32-56 (1354)
53 2r39_A FIXG-related protein; s 83.8 4 0.00014 35.7 8.4 53 694-748 32-84 (118)
54 2qsv_A Uncharacterized protein 83.7 6.9 0.00024 38.3 11.1 75 685-766 10-85 (220)
55 3qis_A Inositol polyphosphate 82.6 10 0.00035 40.3 12.7 96 683-779 35-139 (366)
56 2qsv_A Uncharacterized protein 78.4 14 0.00048 36.0 11.2 88 683-777 124-217 (220)
57 1z9l_A Vesicle-associated memb 67.7 26 0.00089 30.9 9.2 52 693-747 27-78 (128)
58 3idu_A Uncharacterized protein 64.7 31 0.001 30.5 8.9 52 692-747 32-84 (127)
59 1wic_A Hypothetical protein ri 59.8 22 0.00077 32.4 7.4 52 693-747 35-86 (152)
60 1m1s_A WR4; structural genomic 59.2 41 0.0014 29.1 8.5 50 695-747 25-74 (116)
61 3isy_A Bsupi, intracellular pr 58.7 25 0.00086 30.7 7.0 69 693-766 18-104 (120)
62 3zyz_A Beta-D-glucoside glucoh 57.4 25 0.00086 40.8 8.9 55 693-748 613-674 (713)
63 2cri_A Vesicle-associated memb 57.2 32 0.0011 31.1 7.9 52 693-747 31-82 (147)
64 1msp_A MSP, major sperm protei 57.0 44 0.0015 29.3 8.6 52 693-747 25-76 (126)
65 1row_A SSP-19, MSP-domain prot 56.5 38 0.0013 29.0 7.8 49 696-747 18-66 (109)
66 2x41_A Beta-glucosidase; hydro 55.1 23 0.00078 41.3 8.1 56 693-749 615-678 (721)
67 3abz_A Beta-glucosidase I; gly 54.6 37 0.0013 40.2 9.9 44 557-600 619-663 (845)
68 1w8o_A Bacterial sialidase; 3D 50.2 95 0.0033 34.9 12.3 62 681-747 363-425 (601)
69 1wgl_A TOLL-interacting protei 37.8 22 0.00075 26.8 2.8 34 564-597 3-36 (59)
70 4ay0_A Chaperone protein CAF1M 34.8 2.3E+02 0.0078 27.3 10.5 59 693-757 26-91 (218)
71 2l0d_A Cell surface protein; s 34.1 1.3E+02 0.0044 25.9 7.6 24 693-716 19-43 (114)
72 3q48_A Chaperone CUPB2; IG fol 30.9 2.8E+02 0.0097 27.4 10.7 52 693-747 42-103 (257)
73 1ni7_A ER75, hypothetical prot 28.2 42 0.0014 30.7 3.6 34 558-592 77-110 (155)
74 3rfr_A PMOB; membrane, oxidore 25.0 1E+02 0.0034 32.5 6.0 50 692-747 297-368 (419)
75 3gfu_C Chaperone protein FAEE; 24.8 3.9E+02 0.013 25.8 10.1 53 693-747 14-72 (224)
76 3g0m_A Cysteine desulfuration 24.1 40 0.0014 30.3 2.6 34 557-591 69-102 (141)
77 3ndz_E Endoglucanase D; cellot 24.0 3.2E+02 0.011 23.0 9.8 31 693-723 15-46 (107)
78 4djm_A DRAB; chaperone, PILI; 23.4 4.1E+02 0.014 25.9 10.2 52 693-747 36-92 (239)
79 2xg5_A PAPD, chaperone protein 23.4 3E+02 0.01 26.5 9.0 53 693-747 14-73 (218)
80 2kq1_A BH0266 protein; solutio 23.2 21 0.00073 31.0 0.6 53 695-747 55-109 (119)
81 3erx_A Pseudoazurin; copper pr 22.0 1.2E+02 0.0041 26.4 5.3 22 722-744 15-36 (123)
82 2co7_B SAFB chaperone, putativ 20.5 5.2E+02 0.018 24.8 10.1 59 693-757 26-89 (221)
No 1
>3i6s_A Subtilisin-like protease; PA-domain, FN3-domain, hydrolase; HET: NAG FUC; 2.50A {Solanum lycopersicum} PDB: 3i74_A*
Probab=100.00 E-value=4.4e-119 Score=1044.35 Aligned_cols=630 Identities=36% Similarity=0.614 Sum_probs=566.9
Q ss_pred ccCCccccCcccCCCCCCccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCC-CCccccCceeee
Q 047013 115 TTRSWEFLGLEKDNQIPPDSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDT-NKAITCNRKLIG 193 (781)
Q Consensus 115 ~~~s~~~~g~~~~~~~~~~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~-~~~~~~n~ki~g 193 (781)
++++|+|+|+... ..+|..+.+|+||+|||||||||++||+|.+.++++++.+|+|.|+.+. |+...||+|+++
T Consensus 1 Tt~s~~flgl~~~-----~~~w~~~~~G~gViVaViDTGId~~Hp~f~d~g~~p~p~~wkg~c~~g~~f~~~~cN~kiig 75 (649)
T 3i6s_A 1 TTHTSDFLKLNPS-----SGLWPASGLGQDVIVAVLDSGIWPESASFQDDGMPEIPKRWKGICKPGTQFNASMCNRKLIG 75 (649)
T ss_dssp CCSHHHHTTCCSS-----SSHHHHHGGGTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCBTTBCTTSCCSSEEE
T ss_pred CCCChHHcCCCCc-----hhhHhccCCCCCCEEEEEccCCCCCChhhccCCCCCCccccccccccCccccccccccceee
Confidence 4789999999854 5799999999999999999999999999999999999999999999988 888899999999
Q ss_pred eEeccchhhhhhccCCCCCccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCC
Q 047013 194 IRYISEGLIESCRAMNSSFLVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNG 273 (781)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~ 273 (781)
.++|.++++... .+. +.+..++.|.+||||||||||||+.+++.+++|++.+.+.||||+|+|+++|+++..+
T Consensus 76 ~~~f~~~~~~~~--~~~----~~~~~~~~D~~GHGThVAgiiag~~~~~~~~~G~~~g~~~GvAP~A~l~~~kv~~~~g- 148 (649)
T 3i6s_A 76 ANYFNKGILAND--PTV----NITMNSARDTDGHGTHCASITAGNFAKGVSHFGYAPGTARGVAPRARLAVYKFSFNEG- 148 (649)
T ss_dssp EEECCHHHHHHC--TTC----CCTTCSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSSTTCEEEEEECEETTE-
T ss_pred eEeccCcccccc--ccc----ccCCCCCCCCCCcHHHHHHHHhCCCCcCccccccccCceeEECCCCEEEEEeccCCCC-
Confidence 999998876543 111 1234578899999999999999999999999999889999999999999999999875
Q ss_pred CCCCChHHHHHHHHHhhhcCCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCCCccCCCCceEEecc
Q 047013 274 ANLCNAADIIAGFDVAIHDGVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAEKTVDNVPPWVLTVGA 353 (781)
Q Consensus 274 ~~~~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA 353 (781)
+..+++++||+||+++|+||||||||.....+..+++.+++++|+++||+||+||||+|+...++.+.+||+|+|||
T Consensus 149 ---~~~~~i~~Ai~~A~~~gvdVIn~SlG~~~~~~~~~~i~~a~~~A~~~Gi~vV~AAGN~G~~~~t~~~~ap~vitVgA 225 (649)
T 3i6s_A 149 ---TFTSDLIAAMDQAVADGVDMISISYGYRFIPLYEDAISIASFGAMMKGVLVSASAGNRGPGIGSLNNGSPWILCVAS 225 (649)
T ss_dssp ---ECHHHHHHHHHHHHHTTCSEEEECCCCCSCCGGGCHHHHHHHHHHHTTCEEEEECCSCTTSTTCCSCCCTTSEEEEE
T ss_pred ---CCHHHHHHHHHHHHHcCCCEEEeCCccCCcccchhHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCCCCceEEEee
Confidence 89999999999999999999999999886677889999999999999999999999999999999999999999999
Q ss_pred cCCceeeeeeEEeCCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCc--eeEEEEEecCC-
Q 047013 354 STTDREFSSYVTLGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKV--KGKILICYDAK- 430 (781)
Q Consensus 354 ~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~--~gkivl~~~g~- 430 (781)
++.||.|+..+.++++.++.|.+++..... ...+|++|.. ....|.+..++..++ +|||+||.||.
T Consensus 226 st~dr~f~~~~~lgng~~~~g~sl~~~~~~-~~~~plv~~~----------~~~~C~~~~l~~~~vdl~GkIvlc~~g~~ 294 (649)
T 3i6s_A 226 GHTDRTFAGTLTLGNGLKIRGWSLFPARAF-VRDSPVIYNK----------TLSDCSSEELLSQVENPENTIVICDDNGD 294 (649)
T ss_dssp EECSCEEEEEEEETTSCEEEEECCCSSCBC-EEEEEEECCT----------TTTTCCCHHHHTTSSSGGGCEEEECCCSC
T ss_pred eecccceeeEEEeCCCcEEeeeecccCccc-CcceeeEecc----------cccccccccccccccccCCcEEEEeCCCc
Confidence 999999999999999999999999876543 5678999755 456899988888877 99999999999
Q ss_pred cchHHHHHHHhcCceEEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCcccc
Q 047013 431 IGDAKGQRAAQAGAVGMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSF 510 (781)
Q Consensus 431 ~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~ 510 (781)
.+.+|..+++++|+.|+|++|+. .....+.+.+|+++|+.++++.|++|++++.+++++|.+..++.+....+.+++
T Consensus 295 ~~~~k~~~~~~~Ga~g~i~~n~~---~~~~~~~~~~P~~~v~~~~g~~i~~yi~s~~~~~a~i~~~~t~~~~~~~~~va~ 371 (649)
T 3i6s_A 295 FSDQMRIITRARLKAAIFISEDP---GVFRSATFPNPGVVVNKKEGKQVINYVKNSVTPTATITFQETYLDTKPAPVVAA 371 (649)
T ss_dssp HHHHHHHHHHHTCSEEEEECCCG---GGGGCCCCCSCEEEECHHHHHHHHHHHHTCSSCEEEEEEEEEECCCSSCCEECT
T ss_pred cHHHHHHHHHhcCceEEEEecCc---cccccccCcCCEEEEcHHHHHHHHHHHhcCCCceEEEeecceeeccCCCCcccc
Confidence 99999999999999999999987 344556789999999999999999999999999999999999988888999999
Q ss_pred ccCCCCCCCCCCCccCeeeeCCCcEEeeecCCCCCCCCCCCC-CcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHH
Q 047013 511 FSARGPNLIDPAILKPDVIAPGVDIIAAFTNEYGPSHEEFDP-RRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAI 589 (781)
Q Consensus 511 fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~-~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~i 589 (781)
||||||+...+++|||||+|||++|+++|+..........+. ....|..+||||||||||||++|||||+||+|+|++|
T Consensus 372 FSSrGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~~~~d~~~~~~y~~~SGTSMAaPhVAGvaALlks~~P~~Spa~I 451 (649)
T 3i6s_A 372 SSARGPSRSYLGISKPDILAPGVLILAAYPPNVFATSIGTNILLSTDYILESGTSMAAPHAAGIAAMLKAAHPEWSPSAI 451 (649)
T ss_dssp TSCCSSCTTCTTSCSCCEEEECSSEEEECCTTSCCEEETTTEEECCSEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHH
T ss_pred cCCCCCCCCCCCccCCeEEeCCCCeEeecCCCCCccccccccccccceecccccccccHHHHHHHHHHHHhCCCCCHHHH
Confidence 999999997789999999999999999998864433222222 3358999999999999999999999999999999999
Q ss_pred HHHHHhccccCCCCCCcccccCCCCCCCCCcccCCcccccccCCCCeeecCCCcccccccccCCCcccceecccCCCCCC
Q 047013 590 KSAIMTTATTEDSSKHPILDQVTGQKATPFAYGAGHVNPNSALDPGLVYDLGPGDYLAYLCGLGYNQSIIDLFTQPKEPF 669 (781)
Q Consensus 590 k~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~in~~~Av~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 669 (781)
|++||+||+++++.+.|+.+.....+++++.||+|+||+.+|++||||||...+||+.|||++||+..+|++|++ +++
T Consensus 452 ksaLmtTA~~~~~~g~~i~~~~~~~~a~~~~~GaG~vn~~~A~~pGLvyd~~~~dy~~flc~~~y~~~~i~~~~~--~~~ 529 (649)
T 3i6s_A 452 RSAMMTTADPLDNTRKPIKDSDNNKAATPLDMGAGHVDPNRALDPGLVYDATPQDYVNLLCSLNFTEEQFKTIAR--SSA 529 (649)
T ss_dssp HHHHHHTCBCBCTTSSBCEETTTSSBCCHHHHTTCBCCHHHHTCCSEECCCCHHHHHHHHHTTCCCHHHHHHHHT--TTS
T ss_pred HHHHhcccccccCCCCcccccccCCcCCcCCCCeeeeCHHHhcCccccccCCchhHHHhhhcCCCCcccceeeec--CCC
Confidence 999999999999999999885567788999999999999999999999999999999999999999999999999 677
Q ss_pred C--CCCCCCCCCCCCCeEEEec-CCCCc-----EEEEEEEEecCCCCeeEEEEEecCCceEEEEeecEEEEcCCCcEEEE
Q 047013 670 K--CPGPFSIADFNYPSIAVPN-LVNGS-----MTVSRRLKNVGTPTCTYKAQITEIVGVSAVVEPITLNFTKYGEELTF 741 (781)
Q Consensus 670 ~--~~~~~~~~~ln~ps~~~~~-~~~~~-----~~~~~tv~n~~~~~~~y~~~~~~~~~~~v~~~p~~~~~~~~g~~~~~ 741 (781)
. |+. ...+||||||++.. +. .. ++|+|||||||....+|++++++|.|++|+|+|.+|+|++.+|+++|
T Consensus 530 ~~~C~~--~~~~lNyPs~~~~~~~~-~~~~~~~~~~~Rtvtnvg~~~~~y~~~v~~p~g~~v~v~P~~l~f~~~~~~~~f 606 (649)
T 3i6s_A 530 SHNCSN--PSADLNYPSFIALYSIE-GNFTLLEQKFKRTVTNVGKGAATYKAKLKAPKNSTISVSPQILVFKNKNEKQSY 606 (649)
T ss_dssp CC-CCC--CCCCCCCSSEEEEECCS-SCCCCEEEEEEEEEEECC--CEEEEEEEECCTTEEEEEESSEEEECC-CCEEEE
T ss_pred cCCCCC--chhhcCCCcEEeecccC-CCCccceEEEEEEEEEeCCCCcEEEEEEecCCCCEEEEECCEEEEecCCCEEEE
Confidence 7 986 56799999999987 45 45 89999999999989999999999999999999999999889999999
Q ss_pred EEEEEeecCCCCCCCceEEEEEEEEc--CcceEEEEEEEEeC
Q 047013 742 KITFSVKGNDKPVATDYVFGELVWSD--GFHNVKSTIAVKLQ 781 (781)
Q Consensus 742 ~vt~~~~~~~~~~~~~~~~G~i~~~~--~~~~v~~P~~~~~~ 781 (781)
+|||+. .....+.|.||+|+|++ +.|.||+|++|+++
T Consensus 607 ~v~~~~---~~~~~~~~~fg~l~w~~~~~~h~vrsPi~v~~~ 645 (649)
T 3i6s_A 607 TLTIRY---IGDEGQSRNVGSITWVEQNGNHSVRSPIVTSPI 645 (649)
T ss_dssp EEEEEE---CCC---CCCEEEEEEEETTSCCEEEEEEEEEEC
T ss_pred EEEEEe---cccCCCceEEEEEEEEcCCCCeEEEEeEEEEEc
Confidence 999998 34556678999999999 89999999999874
No 2
>3vta_A Cucumisin; subtilisin-like fold, serine protease, hydrolase; HET: DFP NAG FUC BMA MAN; 2.75A {Cucumis melo}
Probab=100.00 E-value=3.8e-109 Score=964.86 Aligned_cols=614 Identities=40% Similarity=0.716 Sum_probs=518.0
Q ss_pred ccCCccccCcccCCCCCCccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeee
Q 047013 115 TTRSWEFLGLEKDNQIPPDSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGI 194 (781)
Q Consensus 115 ~~~s~~~~g~~~~~~~~~~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~ 194 (781)
++++|+|+|++ ..+|.+..+|+||+|||||||||++||+|+++++++++.+|+|.|+.+. .+.||+|++|+
T Consensus 1 tt~s~~flGl~-------~~~~~~~~~G~gViVgViDTGId~~Hp~f~d~g~~~~~~~w~g~~~~~~--~~~~n~k~ig~ 71 (621)
T 3vta_A 1 TTRSWDFLGFP-------LTVPRRSQVESNIVVGVLDTGIWPESPSFDDEGFSPPPPKWKGTCETSN--NFRCNRKIIGA 71 (621)
T ss_dssp CCSHHHHTTCC-------TTCCCCHHHHTTCEEEEEESCBCTTSGGGCCTTCCCCCTTCCCCBCCSS--SCCCCSSEEEE
T ss_pred CCCChhHcCCC-------ccccccCCCCCCCEEEEEecCCCCCChhhcCCCCCCcccccccccccCC--CcccCcceeee
Confidence 57899999997 4688899999999999999999999999999999999999999999877 56799999999
Q ss_pred EeccchhhhhhccCCCCCccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCC
Q 047013 195 RYISEGLIESCRAMNSSFLVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGA 274 (781)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~ 274 (781)
++|..++... +.+..+++|++||||||||||||+...+.+.+|+..+.++||||+|+|++||+|++.+
T Consensus 72 ~~~~~~~~~~----------~~~~~~p~D~~GHGTHvAgi~AG~~~~~~~~~g~~~g~~~GvAP~A~l~~~kv~~~~g-- 139 (621)
T 3vta_A 72 RSYHIGRPIS----------PGDVNGPRDTNGHGTHTASTAAGGLVSQANLYGLGLGTARGGVPLARIAAYKVCWNDG-- 139 (621)
T ss_dssp EECCCSSSCC----------TTCCSSSBCSSSHHHHHHHHHHCCCEEEEEETTEEEEEECCSCTTSEEEEEECEETTE--
T ss_pred eecccCCccC----------CCCCCCCCCCCcCHHHHHHHHhCcCCCCccccccccccEEEECCCCEEEEEEeecCCC--
Confidence 9998764332 2335578899999999999999999888888888888999999999999999999876
Q ss_pred CCCChHHHHHHHHHhhhcCCcEEEecCCCCC-CCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCCCccCCCCceEEecc
Q 047013 275 NLCNAADIIAGFDVAIHDGVDIISASLGSKP-KEHFESSVAVGSFHAMMHGILVVASAGNSGPAEKTVDNVPPWVLTVGA 353 (781)
Q Consensus 275 ~~~~~~~i~~ai~~a~~~g~dVIN~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA 353 (781)
|..+++++||++|+++|+||||||||+.. ..+..+++++++++|+++||++|+||||+|+...++++.+||+++|++
T Consensus 140 --~~~~di~~a~~~a~~~g~dVin~SlG~~~~~~~~~~~~~~~~~~a~~~Gi~vv~aAGN~g~~~~t~~~~a~~~~~v~a 217 (621)
T 3vta_A 140 --CSDTDILAAYDDAIADGVDIISLSVGGANPRHYFVDAIAIGSFHAVERGILTSNSAGNGGPNFFTTASLSPWLLSVAA 217 (621)
T ss_dssp --ECHHHHHHHHHHHHHHTCSEEEECCCCCCGGGGGGCTHHHHHHHHHTTTCEEEEECCSCCSSTTCCCCCCTTSEEEEE
T ss_pred --CCHHHHHHHHHHHHHhCCCEEEecCCCCCCCCcCCcHHHHHHHHHHHCCCEEEEeCCCCCCCCcccCCCCCCceeEEE
Confidence 88999999999999999999999999873 345678899999999999999999999999999999999999999999
Q ss_pred cCCceeeeeeEEeCCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcch
Q 047013 354 STTDREFSSYVTLGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGD 433 (781)
Q Consensus 354 ~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~ 433 (781)
++.++.+...+.++++..+.+.++.... ...+++++..+.............|.+..+++.+++|||++|.++. .
T Consensus 218 st~d~~~~~~~~~~~~~~~~~~s~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~gkivl~~~~~--~ 292 (621)
T 3vta_A 218 STMDRKFVTQVQIGNGQSFQGVSINTFD---NQYYPLVSGRDIPNTGFDKSTSRFCTDKSVNPNLLKGKIVVCEASF--G 292 (621)
T ss_dssp ECCSEEEEEEEEETTSCEEEEBCCCCSC---CEEECEEETTTSCCTTCCHHHHTTTCTTCSCGGGTTTSEEECSSCC--C
T ss_pred eeccccceeeEEeccCceeeeeecccCC---CcccccccccccccccccccccccccccccccccccceEEEEecCC--C
Confidence 9999999999999999999998876543 4667888777766655556677889999999999999999998864 4
Q ss_pred HHHHHHHhcCceEEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccC
Q 047013 434 AKGQRAAQAGAVGMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSA 513 (781)
Q Consensus 434 ~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs 513 (781)
.+..+...+|+.++|++++... ..+.+.+|...++..++..++.++.......+.+....+.. ....+.++.|||
T Consensus 293 ~~~~~~~~~Ga~gvi~~~~~~~----~~~~~~lP~~~v~~~~g~~i~~~~~~~~~~~a~~~~~~~~~-~~~~~~va~FSS 367 (621)
T 3vta_A 293 PHEFFKSLDGAAGVLMTSNTRD----YADSYPLPSSVLDPNDLLATLRYIYSIRSPGATIFKSTTIL-NASAPVVVSFSS 367 (621)
T ss_dssp HHHHHHHHTTCSEEEEECSCCS----SCCCCSSSEEEECHHHHHHHHHHHHHHSSCCEEECCCEEEE-CTTCCCBCTTSC
T ss_pred hhHHhhhhcceeEEEEEecCCC----cccccccceEEECHHHHHHHHHHHhccCCcceEEecceEec-cCCCCceeeecC
Confidence 5667778899999999987643 23467899999999999999999999988888876655443 456789999999
Q ss_pred CCCCCCCCCCccCeeeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHH
Q 047013 514 RGPNLIDPAILKPDVIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAI 593 (781)
Q Consensus 514 ~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L 593 (781)
|||+...++++||||+|||++|+|+++....... ......|..+||||||||||||++|||||+||+|+|++||++|
T Consensus 368 rGP~~~~~~ilKPDI~APG~~Ilsa~~~~~~~~~---~~~~~~y~~~SGTSMAaPhVAGvaALl~q~~P~~spa~IksaL 444 (621)
T 3vta_A 368 RGPNRATKDVIKPDISGPGVEILAAWPSVAPVGG---IRRNTLFNIISGTSMSCPHITGIATYVKTYNPTWSPAAIKSAL 444 (621)
T ss_dssp CCSCTTCTTSCSCCEEEECSSEEEECCSSSCBTT---BCCCCSEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHH
T ss_pred CCCCCCCCCeeccccccCCcceEeecCccccccC---cCCCCcceEecCccccchhhhhHHHHHHHHCCCCCHHHHHHHH
Confidence 9999877899999999999999999986543221 2334589999999999999999999999999999999999999
Q ss_pred HhccccCCCCCCcccccCCCCCCCCCcccCCcccccccCCCCeeecCCCcccccccccCCCcccceecccCCCCCCCCCC
Q 047013 594 MTTATTEDSSKHPILDQVTGQKATPFAYGAGHVNPNSALDPGLVYDLGPGDYLAYLCGLGYNQSIIDLFTQPKEPFKCPG 673 (781)
Q Consensus 594 ~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~in~~~Av~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 673 (781)
|+||++++..+. ++.+++||+|+||+.+|++|+||||+..+||+.|||++||+.++++.+++ ....|+.
T Consensus 445 mtTA~~~~~~~~---------~~~~~~~GaG~v~~~~A~~pGLvyd~~~~dy~~~lc~~~~~~~~~~~~~~--~~~~~~~ 513 (621)
T 3vta_A 445 MTTASPMNARFN---------PQAEFAYGSGHVNPLKAVRPGLVYDANESDYVKFLCGQGYNTQAVRRITG--DYSACTS 513 (621)
T ss_dssp HHTCBCCCTTTC---------TTTHHHHTTCBCCHHHHSCCSEECCCCGGGCC---------------------------
T ss_pred HhcCCcccccCC---------CCCchhcCCCccCHHHhcCCCeEeecccchhhhhhcccCCCchhheeeec--cccccCC
Confidence 999998865543 44568999999999999999999999999999999999999999999998 7888876
Q ss_pred CC--CCCCCCCCeEEEecCC--CCcEEEEEEEEecCCCCeeEEEEEecCCceEEEEeecEEEEcCCCcEEEEEEEEEeec
Q 047013 674 PF--SIADFNYPSIAVPNLV--NGSMTVSRRLKNVGTPTCTYKAQITEIVGVSAVVEPITLNFTKYGEELTFKITFSVKG 749 (781)
Q Consensus 674 ~~--~~~~ln~ps~~~~~~~--~~~~~~~~tv~n~~~~~~~y~~~~~~~~~~~v~~~p~~~~~~~~g~~~~~~vt~~~~~ 749 (781)
.. ...+||||||++.... ..+++|+|||||+|....+|++++++|.|++|+|+|.+|+|++.||+++|+|||+.
T Consensus 514 ~~~~~~~~lN~pS~~v~~~~~~~~~~t~~rtvtnvg~~~~ty~~~v~~p~gv~v~V~P~~l~f~~~~~~~~~~vt~~~-- 591 (621)
T 3vta_A 514 GNTGRVWDLNYPSFGLSVSPSQTFNQYFNRTLTSVAPQASTYRAMISAPQGLTISVNPNVLSFNGLGDRKSFTLTVRG-- 591 (621)
T ss_dssp ----CGGGSCCSSEEEECCSSCCEEEEEEEEEEECSSSCEEEEEEEECCSSEEEEEESSEEEECSTTCEEEEEEEEEE--
T ss_pred CCcCcccccccccEEEEccCCCceEEEEEEEEEccCCCCeEEEEEEECCCCcEEEEecCEEEEcCCCcEEEEEEEEEe--
Confidence 54 5679999999986322 27899999999999999999999999999999999999999888999999999987
Q ss_pred CCCCCCCceEEEEEEEEcCcceEEEEEEEEe
Q 047013 750 NDKPVATDYVFGELVWSDGFHNVKSTIAVKL 780 (781)
Q Consensus 750 ~~~~~~~~~~~G~i~~~~~~~~v~~P~~~~~ 780 (781)
..++.|+||+|+|+++.|.||+|++|+.
T Consensus 592 ---~~~~~~~~g~l~w~d~~h~Vr~Pi~v~~ 619 (621)
T 3vta_A 592 ---SIKGFVVSASLVWSDGVHYVRSPITITS 619 (621)
T ss_dssp ---CCCSSEEEEEEEEECSSCCCEEEEEEEC
T ss_pred ---cCCCceEEEEEEEEcCCEEEEeCEEEEE
Confidence 3678899999999999999999999985
No 3
>1xf1_A C5A peptidase, SCP; hydrolase; HET: CIT; 1.90A {Streptococcus pyogenes} PDB: 3eif_A*
Probab=100.00 E-value=4.2e-81 Score=757.18 Aligned_cols=540 Identities=21% Similarity=0.247 Sum_probs=425.1
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCC----------C-CCccccCceeeeeEeccchh
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQND----------T-NKAITCNRKLIGIRYISEGL 201 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~----------~-~~~~~~n~ki~g~~~~~~~~ 201 (781)
..+|..+++|+||+|||||||||++||+|.+. ..|++.|... . ..+.+||+|++++++|.++.
T Consensus 7 ~~~w~~~~~G~GV~VaVIDTGId~~Hp~f~~~------~~~~~~~~~~~~~~~~~~~~g~~~g~~~n~Kii~~~~~~~~~ 80 (926)
T 1xf1_A 7 KTLQEKAGKGAGTVVAVIDAGFDKNHEAWRLT------DKTKARYQSKEDLEKAKKEHGITYGEWVNDKVAYYHDYSKDG 80 (926)
T ss_dssp HHHHHHHCSCTTCEEEEEESCCTTCCCCCSCC------SCCCSSCCHHHHHHHHHHTTTCCCCBCCSSSCCEEEESCCCS
T ss_pred HHHHhccCCCCCcEEEEEecCCCCCCHhHcCC------CCCcccccchhhhcccccccCcccccccCcccceeeccccCC
Confidence 47999999999999999999999999999853 4566655432 1 23458999999999986531
Q ss_pred hhhhccCCCCCccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHH
Q 047013 202 IESCRAMNSSFLVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAAD 281 (781)
Q Consensus 202 ~~~~~~~~~~~~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~ 281 (781)
...|..||||||||||||+...+.+. .+.+.||||+|+|+++|+|++.+. .+..++
T Consensus 81 ------------------~~~D~~gHGThVAgiiAg~~~~~~~~----~~~~~GvAP~A~l~~~kv~~~~g~--~~~~~~ 136 (926)
T 1xf1_A 81 ------------------KTAVDQEHGTHVSGILSGNAPSETKE----PYRLEGAMPEAQLLLMRVEIVNGL--ADYARN 136 (926)
T ss_dssp ------------------CCCCSSTTTTHHHHSSCCCCCCCCSC----SCCTTTTCTTSEEEEEECCCCSCH--HHHHHH
T ss_pred ------------------CCCCCCCcHHHHHHHHhCCCccCccc----CCceEEECCCCEEEEEEeecCCCC--CCcHHH
Confidence 12288999999999999987554321 246799999999999999987641 245678
Q ss_pred HHHHHHHhhhcCCcEEEecCCCCC--CCCCCChHHHHHHHHHhCCCEEEEecCCCCCCC-------------CCccC--C
Q 047013 282 IIAGFDVAIHDGVDIISASLGSKP--KEHFESSVAVGSFHAMMHGILVVASAGNSGPAE-------------KTVDN--V 344 (781)
Q Consensus 282 i~~ai~~a~~~g~dVIN~SlG~~~--~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-------------~~~~~--~ 344 (781)
+++||+||+++|+||||||||... ...+.+++..+++.|.++||+||+||||+|+.. .++.+ .
T Consensus 137 i~~Ai~~Ai~~gvdVIn~SlG~~~~~~~~~~~~~~~ai~~A~~~GilvV~AAGN~G~~g~~~~~~~~~~p~~~tv~~PA~ 216 (926)
T 1xf1_A 137 YAQAIRDAINLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSSFGGKTRLPLADHPDYGVVGTPAA 216 (926)
T ss_dssp HHHHHHHHHHTTCEEEEECCSSCCCTTCCCCHHHHHHHHHHHHTTCEEEEECCSCCBTTCTTSCCBTTCCCCBCCCSCTT
T ss_pred HHHHHHHHHHhCCcEEEECCCCCCCCccccccHHHHHHHHHHhCCcEEEEeCCCCCCcCCccccccccCCCcceecCccc
Confidence 999999999999999999999873 234566788899999999999999999999632 22333 4
Q ss_pred CCceEEecccCCceeeeeeEEe-CCceEEeeeeeec-cCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeE
Q 047013 345 PPWVLTVGASTTDREFSSYVTL-GNKMVIKGASIAE-KGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGK 422 (781)
Q Consensus 345 ~p~vitVgA~~~d~~~~~~~~~-~~~~~~~g~~~~~-~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gk 422 (781)
+||+|+|||++.++.+...+.+ +++....+.++.. ..+.....+|+++..+ .|.+..+ .+++||
T Consensus 217 ~~~vitVgA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~~~~------------g~~~~~~--~~v~Gk 282 (926)
T 1xf1_A 217 ADSTLTVASYSPDKQLTETVRVKTADQQDKEMPVLSTNRFEPNKAYDYAYANR------------GTKEDDF--KDVKGK 282 (926)
T ss_dssp TCCSEEEEEEBCSEEEEEEEEEECTTSCEEEEEEEEESCCCTTCCEEEEECTT------------SCSTTTT--TTCTTS
T ss_pred CCceEEEeccccccccccceEEEcCCCcceeeEEEecCCCCCCceEEEEECCC------------CCCccch--hhcCCe
Confidence 7999999999999999888887 5554444555433 2233467789987542 4766666 689999
Q ss_pred EEEEecCC-cchHHHHHHHhcCceEEEEecCCCCcccc-ccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeee
Q 047013 423 ILICYDAK-IGDAKGQRAAQAGAVGMILANSREDQNIS-LNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEF 500 (781)
Q Consensus 423 ivl~~~g~-~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~-~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~ 500 (781)
|+||+||. .+.+|..+++.+|+.|+|++|+....... .....++|+.+|+.++++.|.. .+..++++.......
T Consensus 283 ivl~~rg~~~~~~k~~~~~~~Ga~gvi~~n~~~~~~~~~~~~~~~iP~~~i~~~~g~~l~~----~~~~ti~~~~~~~~~ 358 (926)
T 1xf1_A 283 IALIERGDIDFKDKIAKAKKAGAVGVLIYDNQDKGFPIELPNVDQMPAAFISRKDGLLLKD----NPQKTITFNATPKVL 358 (926)
T ss_dssp EEEEECCSSCHHHHHHHHHHTTCSEEEEECSSTTCCCEECCCSTTCCEEEECHHHHHHHHH----CSSCEEEECSSCEEE
T ss_pred EEEEECCCCCHHHHHHHHHhCCCcEEEEEecCCCCcccccCccccccEEEEeHHHHHHHHh----CCceEEEecccceec
Confidence 99999999 99999999999999999999987543322 2335689999999999988763 556666665555445
Q ss_pred ccccCCccccccCCCCCCCCCCCccCeeeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHH-
Q 047013 501 NKIWSRMTSFFSARGPNLIDPAILKPDVIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKT- 579 (781)
Q Consensus 501 ~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q- 579 (781)
.....+.++.||||||+. ++++||||+|||++|+++++++ .|..+||||||||||||++|||+|
T Consensus 359 ~~~~~~~~a~FSSrGp~~--~~~lKPDI~APG~~I~sa~~~~-------------~y~~~SGTSMAaPhVAG~aALl~q~ 423 (926)
T 1xf1_A 359 PTASGTKLSRFSSWGLTA--DGNIKPDIAAPGQDILSSVANN-------------KYAKLSGTSMSAPLVAGIMGLLQKQ 423 (926)
T ss_dssp ECSSCSBCCTTSCCCBCT--TSCBSCCEEEECCCEEESSSCS-------------SSCEEESCTTHHHHHHHHHHHHHHH
T ss_pred ccCCcceeccccCCCCCC--CCccCceEECCCCCEEeeccCC-------------cceecCccchhHHHHHHHHHHHHHH
Confidence 556678999999999997 9999999999999999999764 899999999999999999999965
Q ss_pred ---hCCCCCHHH----HHHHHHhccccCCCCCCcccccCCCCCCCCCcccCCcccccccCCCCeeecCCCcccccccccC
Q 047013 580 ---LHPDWSPAA----IKSAIMTTATTEDSSKHPILDQVTGQKATPFAYGAGHVNPNSALDPGLVYDLGPGDYLAYLCGL 652 (781)
Q Consensus 580 ---~~p~lt~~~----ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~in~~~Av~~~l~~~~~~~~~~~~~~~~ 652 (781)
.||+|+|+| ||++||+||++++..+ ....+++++||+|+||+.+|+++.+ |||..
T Consensus 424 ~k~~~P~~sp~~~~~~Iks~L~~TA~~~~~~~-------~~~~~~~~~~G~G~vn~~~A~~~~~-----------~l~~~ 485 (926)
T 1xf1_A 424 YETQYPDMTPSERLDLAKKVLMSSATALYDED-------EKAYFSPRQQGAGAVDAKKASAATM-----------YVTDK 485 (926)
T ss_dssp HHHSSSSSHHHHHHHHHHHHHHHHSBCCEEGG-------GTEECCHHHHTTCBCCHHHHHHCSE-----------EEEES
T ss_pred HhccCCCCCHHHHHHHHHHHHHhcCCCcccCC-------CCccCChhccCCCccCHHHhcCCCe-----------EEEcC
Confidence 599999997 9999999999874321 1234678899999999999999854 57877
Q ss_pred CCcccceecccCCCCCCCCCCCCCCCCCCCCeEEEecCCCCcEEEEEEEEecCCCC--eeEEEEEec--CCceEEEEeec
Q 047013 653 GYNQSIIDLFTQPKEPFKCPGPFSIADFNYPSIAVPNLVNGSMTVSRRLKNVGTPT--CTYKAQITE--IVGVSAVVEPI 728 (781)
Q Consensus 653 g~~~~~~~~~~~~~~~~~~~~~~~~~~ln~ps~~~~~~~~~~~~~~~tv~n~~~~~--~~y~~~~~~--~~~~~v~~~p~ 728 (781)
+++.. +|.++++. ...+++|||+|+|+.+ .+|++.+.. +.+..++++|.
T Consensus 486 ~~~~~--------------------------~i~l~~~~-~~~~~~~tv~N~g~~~~~~~y~~~v~~~~~~~~~~~v~p~ 538 (926)
T 1xf1_A 486 DNTSS--------------------------KVHLNNVS-DKFEVTVNVHNKSDKPQELYYQATVQTDKVDGKHFALAPK 538 (926)
T ss_dssp SSSCS--------------------------CEEEEEEC-SEEEEEEEEEECSSSCEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred CCCcc--------------------------eeeccccC-ccEEEEEEEEEeCCCceeEEEEEEEEeccCCCceEEeccc
Confidence 65332 45556555 6889999999999854 567777764 66888888887
Q ss_pred EEEEc-------CCCcEEEEEEEEEeecC-----CCCCCCceEEEEEEEE--cCcc-eEEEEEEEEe
Q 047013 729 TLNFT-------KYGEELTFKITFSVKGN-----DKPVATDYVFGELVWS--DGFH-NVKSTIAVKL 780 (781)
Q Consensus 729 ~~~~~-------~~g~~~~~~vt~~~~~~-----~~~~~~~~~~G~i~~~--~~~~-~v~~P~~~~~ 780 (781)
.|.+. ++||+++|+|||++... +.++++.|+||+|+|+ ++.| .||+||++..
T Consensus 539 ~l~~~~~~~vtv~ag~~~~~~vt~~~~~~~~~~~~~~~~~~~~~G~i~~~~~~~~~~~v~~P~~~~~ 605 (926)
T 1xf1_A 539 VLYETSWQKITIPANSSKQVTVPIDASRFSKDLLAQMKNGYFLEGFVRFKQDPTKEELMSIPYIGFR 605 (926)
T ss_dssp EEEECCCEEEEECTTEEEEEEEEEECHHHHHHHHHHSTTCEEEEEEEEEESSTTSCCCEEEEEEEEE
T ss_pred eeEeccCCeEEECCCCEEEEEEEEEcCccchhhcccccCCcEEEEEEEEEeCCCCCCEEEeeeEEEe
Confidence 65544 45999999999997310 1245677999999999 4555 5999999863
No 4
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=100.00 E-value=1.1e-60 Score=546.28 Aligned_cols=369 Identities=32% Similarity=0.451 Sum_probs=290.3
Q ss_pred cCCCcEEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHhCCchhccccEEEEeccceeeEEEEeCHHHHHHH--------
Q 047013 25 TAKKPYVVYLGSHSHGSNPTSHDINRARIKHHEFLGSFLGSVEEAAGLIFHSYGRYINGFGAVLEEEHAKQI-------- 96 (781)
Q Consensus 25 ~~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~s~~l~~~~i~~L-------- 96 (781)
.++.+|||.||+.... +...++++.+ ..++.++|. .|+||+++++++++++|
T Consensus 33 ~~~~~~iV~~~~~~~~------------~~~~~~~~~~-------g~~v~~~~~-~~~g~~~~l~~~~~~~l~~~~~~~~ 92 (539)
T 3afg_A 33 DQEVSTIIMFDNQADK------------EKAVEILDFL-------GAKIKYNYH-IIPALAVKIKVKDLLIIAGLMDTGY 92 (539)
T ss_dssp TCEEEEEEEESSHHHH------------HHHHHHHHHH-------TCEEEEECS-SSSEEEEEEEHHHHHHHTTCSCCC-
T ss_pred cCceEEEEEECCCCCH------------HHHHHHHHhc-------CCeEEEEee-eeeEEEEEeCHHHHHHHHhhccccc
Confidence 3445799999985431 2222333332 257889997 79999999999999999
Q ss_pred ---hcCCCeEEEEEcceecccccCCccccCcccC-CCCCCccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCC
Q 047013 97 ---ARHPEVVSVFLEEGIDLHTTRSWEFLGLEKD-NQIPPDSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDR 172 (781)
Q Consensus 97 ---~~~~~V~~V~~~~~~~~~~~~s~~~~g~~~~-~~~~~~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~ 172 (781)
+++|+|++|+++..+++.... .++... .+.....+|..+++|+||+|||||||||++||+|.++
T Consensus 93 ~~~~~~~~V~~v~~d~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~G~gv~VaViDtGid~~Hpdl~~~-------- 160 (539)
T 3afg_A 93 FGNAQLSGVQFIQEDYVVKVAVET----EGLDESAAQVMATNMWNLGYDGSGITIGIIDTGIDASHPDLQGK-------- 160 (539)
T ss_dssp --CCCCTTEEEEEECCEEECC---------------CCBCSCCBCCSCCCTTCEEEEEESBCCTTSGGGTTT--------
T ss_pred cccccCCCeeEEEecccccccCcc----ccCCccccccCcHhHHhcCCCCCCcEEEEEecCCCCCChHHhCC--------
Confidence 899999999999998875321 111110 0111257899999999999999999999999999743
Q ss_pred CcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCCccCCCCCCCCCCCCccccccccccccccccccccccCCcc
Q 047013 173 WQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSFLVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGT 252 (781)
Q Consensus 173 ~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~ 252 (781)
+++.++|.++ ...+.|++||||||||||||+.... .+.
T Consensus 161 ------------------i~~~~d~~~~-----------------~~~~~D~~gHGThVAgiiag~~~~~-------~g~ 198 (539)
T 3afg_A 161 ------------------VIGWVDFVNG-----------------KTTPYDDNGHGTHVASIAAGTGAAS-------NGK 198 (539)
T ss_dssp ------------------EEEEEETTTC-----------------CSSCCBSSSHHHHHHHHHHCCCGGG-------TTT
T ss_pred ------------------EeeeEECCCC-----------------CCCCCCCCCCHHHHHHHHhCcCccC-------CCC
Confidence 5666666543 1246788999999999999985321 234
Q ss_pred ccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhc----CCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEE
Q 047013 253 AKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHD----GVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVV 328 (781)
Q Consensus 253 ~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~----g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV 328 (781)
+.||||+|+|+.+|++++.+ .++.+++++||+||+++ |++|||||||........+.+..++.++.++|++||
T Consensus 199 ~~GvAp~A~l~~~kv~~~~g---~~~~~~i~~ai~~a~~~~~~~g~~Vin~SlG~~~~~~~~~~l~~ai~~a~~~GvlvV 275 (539)
T 3afg_A 199 YKGMAPGAKLVGIKVLNGQG---SGSISDIINGVDWAVQNKDKYGIKVINLSLGSSQSSDGTDSLSQAVNNAWDAGLVVV 275 (539)
T ss_dssp TCCSCTTCEEEEEECSCTTS---EEEHHHHHHHHHHHHHTHHHHTEEEEEECCCCCSCCCSCSHHHHHHHHHHHTTCEEE
T ss_pred EEEECCCCEEEEEEeecCCC---CcCHHHHHHHHHHHHhhhhhcCCcEEEeCCCCCCCCccchHHHHHHHHHHhcCCEEE
Confidence 68999999999999998776 47889999999999975 899999999987544566788999999999999999
Q ss_pred EecCCCCCCCCC--ccCCCCceEEecccCCceeeeeeEEeCCceEEeeeeeeccCCCCCcceeeEecccccccccCcccc
Q 047013 329 ASAGNSGPAEKT--VDNVPPWVLTVGASTTDREFSSYVTLGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDA 406 (781)
Q Consensus 329 ~AAGN~g~~~~~--~~~~~p~vitVgA~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~ 406 (781)
+||||+|+...+ .++..+++|+|||++.
T Consensus 276 ~AAGN~g~~~~~~~~Pa~~~~vitVgA~~~-------------------------------------------------- 305 (539)
T 3afg_A 276 VAAGNSGPNKYTVGSPAAASKVITVGAVDK-------------------------------------------------- 305 (539)
T ss_dssp EECCSCCSSSSCCCTTTTCSSSEEEEEECT--------------------------------------------------
T ss_pred EECCCCCCCCCcccCCccCCceEEEeeecC--------------------------------------------------
Confidence 999999976544 3456799999998432
Q ss_pred CCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceEEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcC
Q 047013 407 TQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVGMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNT 486 (781)
Q Consensus 407 ~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~ 486 (781)
T Consensus 306 -------------------------------------------------------------------------------- 305 (539)
T 3afg_A 306 -------------------------------------------------------------------------------- 305 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccCeeeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccch
Q 047013 487 ENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPDVIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMA 566 (781)
Q Consensus 487 ~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmA 566 (781)
.+.+++||||||+. ++++||||+|||++|++++....... ......|..++|||||
T Consensus 306 ------------------~~~~a~fSs~Gp~~--~~~~kpdi~APG~~I~s~~~~~~~~~----~~~~~~y~~~sGTSmA 361 (539)
T 3afg_A 306 ------------------YDVITDFSSRGPTA--DNRLKPEVVAPGNWIIAARASGTSMG----QPINDYYTAAPGTAMA 361 (539)
T ss_dssp ------------------TSCBCSSSCCCCCT--TCBCCCSEEEECSSEEEECCTTCCCS----EECSSSEEEECSHHHH
T ss_pred ------------------CcccccccCCCCCC--CCCCcccEecCcCCEEeeccCCCCCC----CCCcccccccCchHHH
Confidence 14789999999998 89999999999999999986532110 1112269999999999
Q ss_pred hhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCcccccCCCCCCCCCcccCCcccccccCCCC
Q 047013 567 CPHVAGIAGLVKTLHPDWSPAAIKSAIMTTATTEDSSKHPILDQVTGQKATPFAYGAGHVNPNSALDPG 635 (781)
Q Consensus 567 aP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~in~~~Av~~~ 635 (781)
||||||++|||+|++|+|++++||++|++||++++..+ .+++.||+|+||+.+|++..
T Consensus 362 aP~VAG~aALl~~~~p~~s~~~vk~~L~~tA~~~~~~~-----------~~~~~~G~G~vn~~~Al~~~ 419 (539)
T 3afg_A 362 TPHVAGIAALLLQAHPSWTPDKVKTALIETADIVKPDE-----------IADIAYGAGRVNAYKAAYYD 419 (539)
T ss_dssp HHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSBCSSGGG-----------CSBTTTBTCBCCHHHHHTGG
T ss_pred HHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccCCCCC-----------CCccCccCCccCHHHHhhhc
Confidence 99999999999999999999999999999998764221 24578999999999999953
No 5
>2z2z_A TK-subtilisin precursor; thermococcus kodakaraensis, hydrolase; 1.87A {Thermococcus kodakarensis} PDB: 2e1p_A 2zwp_A 2zwo_A
Probab=100.00 E-value=3.4e-58 Score=509.45 Aligned_cols=345 Identities=25% Similarity=0.354 Sum_probs=276.9
Q ss_pred CCcEEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHhCCchhccccEEEEeccceeeEEEEeCHHHHHHHhcCCCeEEEE
Q 047013 27 KKPYVVYLGSHSHGSNPTSHDINRARIKHHEFLGSFLGSVEEAAGLIFHSYGRYINGFGAVLEEEHAKQIARHPEVVSVF 106 (781)
Q Consensus 27 ~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~s~~l~~~~i~~L~~~~~V~~V~ 106 (781)
+.+|||.||+.... .++++. ...++.++|. .+++|+++++++++++|+++|+|++|+
T Consensus 2 ~~~~iV~~~~~~~~---------------~~~~~~-------~g~~v~~~~~-~~~~~~~~~~~~~~~~L~~~p~V~~v~ 58 (395)
T 2z2z_A 2 TIRVIVSVDKAKFN---------------PHEVLG-------IGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVE 58 (395)
T ss_dssp EEEEEEEECTTTCC---------------HHHHHH-------TTCEEEEECS-SSSEEEEEEEGGGHHHHHTSTTEEEEE
T ss_pred cEEEEEEECCCccH---------------HHHHHH-------cCCEEEEEec-cCCEEEEEECHHHHHHHHcCCCceEEE
Confidence 46899999997432 112222 2357889998 699999999999999999999999999
Q ss_pred EcceecccccCCc-----------cccCcccCCCCCCccccccCCCCCc--eEEEEecCCCCcCCCCccCCCCCCCCCCC
Q 047013 107 LEEGIDLHTTRSW-----------EFLGLEKDNQIPPDSAWNKARFGED--VIIGNLDSGVWPESQSFTDEGMGPIPDRW 173 (781)
Q Consensus 107 ~~~~~~~~~~~s~-----------~~~g~~~~~~~~~~~~w~~~~~G~g--v~VaVIDtGid~~Hp~f~~~~~~~~~~~~ 173 (781)
++..++++....+ ..|++... ....+|..+ +|+| |+|||||||||++||+|.++
T Consensus 59 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~i---~~~~~w~~~-~G~g~~v~VaViDtGid~~Hp~l~~~--------- 125 (395)
T 2z2z_A 59 FDHQAVLLGKPSWLGGGSTQPAQTIPWGIERV---KAPSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN--------- 125 (395)
T ss_dssp ECCEEEECCEECC------CCSCCCCHHHHHT---TCGGGGGTC-SSCCTTCEEEEEESCBCTTCTTTGGG---------
T ss_pred EeeeecccCCCCcccccccCccccCCcchhhc---CHHHHHhhc-CCCCCcEEEEEEcCCCCCCChhHhhc---------
Confidence 9999876532221 12233222 125789988 9999 99999999999999999753
Q ss_pred cccccCCCCCccccCceeeeeEeccchhhhhhccCCCCCccCCCCCCCCCCCCccccccccccccccccccccccCCccc
Q 047013 174 QGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSFLVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTA 253 (781)
Q Consensus 174 ~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~ 253 (781)
+...++|..+... . +..+..|+.||||||||||+|.. + ...+
T Consensus 126 -----------------~~~~~~~~~~~~~------~------~~~~~~d~~gHGT~vAgiia~~~-n--------~~g~ 167 (395)
T 2z2z_A 126 -----------------IAWCVSTLRGKVS------T------KLRDCADQNGHGTHVIGTIAALN-N--------DIGV 167 (395)
T ss_dssp -----------------EEEEEECGGGCCB------C------CHHHHBCSSSHHHHHHHHHHCCC-S--------SSSC
T ss_pred -----------------cccCccccCCccc------C------CCCCCCCCCCCHHHHHHHHHeec-C--------CCce
Confidence 4444445432100 0 00124678999999999999973 1 1234
Q ss_pred cccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhc--------------------CCcEEEecCCCCCCCCCCChH
Q 047013 254 KGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHD--------------------GVDIISASLGSKPKEHFESSV 313 (781)
Q Consensus 254 ~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~--------------------g~dVIN~SlG~~~~~~~~~~~ 313 (781)
.||||+|+|+.+|++++.+ .++.+++++||+||+++ +++|||||||... ....+
T Consensus 168 ~GvAp~a~l~~~kv~~~~g---~~~~~~i~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~ 241 (395)
T 2z2z_A 168 VGVAPGVQIYSVRVLDARG---SGSYSDIAIGIEQAILGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA---DDSYL 241 (395)
T ss_dssp CCSSTTCEEEEEECSCTTS---EEEHHHHHHHHHHHHHTTTTCSSTTCSSCCTTCTTSCCCSEEEECEEBSC---CCHHH
T ss_pred EEECCCCEEEEEEEecCCC---CccHHHHHHHHHHHHhCccccccccccccccccccCCCCeEEEecCCCCC---CCHHH
Confidence 8999999999999998776 47789999999999987 9999999999873 23567
Q ss_pred HHHHHHHHhCCCEEEEecCCCCCCCCCccCCCCceEEecccCCceeeeeeEEeCCceEEeeeeeeccCCCCCcceeeEec
Q 047013 314 AVGSFHAMMHGILVVASAGNSGPAEKTVDNVPPWVLTVGASTTDREFSSYVTLGNKMVIKGASIAEKGSLTQDFYPLIAG 393 (781)
Q Consensus 314 ~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~ 393 (781)
..++.++.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 242 ~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------------------------ 285 (395)
T 2z2z_A 242 YDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIAVGAIDSN------------------------------------ 285 (395)
T ss_dssp HHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT------------------------------------
T ss_pred HHHHHHHHHCCCEEEEECCCCCCCCCCCccCCCCEEEEEEecCC------------------------------------
Confidence 78888899999999999999998777778888999999985422
Q ss_pred ccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceEEEEecCCCCccccccccccccEEEEeh
Q 047013 394 EAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVGMILANSREDQNISLNMVHFLPTAYVNY 473 (781)
Q Consensus 394 ~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~ 473 (781)
T Consensus 286 -------------------------------------------------------------------------------- 285 (395)
T 2z2z_A 286 -------------------------------------------------------------------------------- 285 (395)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccCeeeeCCCcEEeeecCCCCCCCCCCCCC
Q 047013 474 KDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPDVIAPGVDIIAAFTNEYGPSHEEFDPR 553 (781)
Q Consensus 474 ~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~ 553 (781)
+.+++||++|| +|+|||++|+++++.+
T Consensus 286 --------------------------------~~~a~fS~~G~----------~v~APG~~i~s~~~~~----------- 312 (395)
T 2z2z_A 286 --------------------------------DNIASFSNRQP----------EVSAPGVDILSTYPDD----------- 312 (395)
T ss_dssp --------------------------------SCBCTTSCSSC----------SEEEECSSEEEEETTT-----------
T ss_pred --------------------------------CCCCcccCCCC----------CEEeCCCCeeeecCCC-----------
Confidence 57899999997 6799999999999864
Q ss_pred cccceeeccccchhhHHHHHHHHHHHhCC-------------CCCHHHHHHHHHhccccCCCCCCcccccCCCCCCCCCc
Q 047013 554 RVPYNVMSGTSMACPHVAGIAGLVKTLHP-------------DWSPAAIKSAIMTTATTEDSSKHPILDQVTGQKATPFA 620 (781)
Q Consensus 554 ~~~y~~~sGTSmAaP~VAG~aALl~q~~p-------------~lt~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~ 620 (781)
.|..++|||||||||||++|||+|++| .|++.+||++|++||++++..| .++.
T Consensus 313 --~y~~~sGTS~AaP~VaG~aAll~~~~p~~~~~~~~~~~~~~ls~~~v~~~L~~tA~~~~~~g------------~~~~ 378 (395)
T 2z2z_A 313 --SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILPVGTFDDISKNTVRGILHITADDLGPTG------------WDAD 378 (395)
T ss_dssp --EEEEEESHHHHHHHHHHHHHHHHHHHHHHHSSCCCCCCTTCCSSSSHHHHHHHHSBCCSSSS------------SBTT
T ss_pred --ceEecCCHHHHHHHHHHHHHHHHHhCccccccccccccccCCCHHHHHHHHHhhccccCCCC------------CCCC
Confidence 899999999999999999999999999 9999999999999999874322 3468
Q ss_pred ccCCcccccccCCC
Q 047013 621 YGAGHVNPNSALDP 634 (781)
Q Consensus 621 ~G~G~in~~~Av~~ 634 (781)
||||+||+.+|++.
T Consensus 379 ~G~G~vd~~~A~~~ 392 (395)
T 2z2z_A 379 YGYGVVRAALAVQA 392 (395)
T ss_dssp TBTCBCCHHHHHHH
T ss_pred ccCceeCHHHHHHH
Confidence 99999999999874
No 6
>3t41_A Epidermin leader peptide processing serine protea; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Staphylococcus aureus} PDB: 3qfh_A
Probab=100.00 E-value=6.6e-56 Score=503.83 Aligned_cols=336 Identities=19% Similarity=0.202 Sum_probs=262.3
Q ss_pred ccEEEEeccceeeEEEEeCHHHHHHHhc-CCCeEEEEEcceecccccCCc----------cccCcccCCCCCCccccccC
Q 047013 71 GLIFHSYGRYINGFGAVLEEEHAKQIAR-HPEVVSVFLEEGIDLHTTRSW----------EFLGLEKDNQIPPDSAWNKA 139 (781)
Q Consensus 71 ~~i~~~y~~~~~g~s~~l~~~~i~~L~~-~~~V~~V~~~~~~~~~~~~s~----------~~~g~~~~~~~~~~~~w~~~ 139 (781)
.++.+.|. .|++|+++++++++++|++ +|+|++|+++..++++..... ..|++...... ..+|..+
T Consensus 66 ~~v~~~~~-~~~~~~~~~~~~~~~~L~~~~p~V~~v~~~~~~~~~~~~~~~~~~~~~~~~~~w~l~~i~~~--~~~~~~~ 142 (471)
T 3t41_A 66 LNVVYNIP-ELHVAQIKMTKMHANALANYKNDIKYINATCSTCITSEKTIDRTSNESLFSRQWDMNKITNN--GASYDDL 142 (471)
T ss_dssp CEEEEEEG-GGTEEEEEECHHHHHHHHTCTTTEEEEEECCSSCBCCCCCCCC---CCSCCCCHHHHTTTTT--TGGGGGC
T ss_pred CEEEEecC-CccEEEEEeCHHHHHHHHhcCCCCcEEEecceeccccccccccCCCCccccccccHhhccCc--HHHHhcc
Confidence 56788886 6999999999999999999 999999999988877543221 11233322211 3789999
Q ss_pred CCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCCccCCCCC
Q 047013 140 RFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSFLVPENLT 219 (781)
Q Consensus 140 ~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~p~~~~ 219 (781)
.+|+||+|||||||||++||+|.++- |. +.+.|..+........+. ..+..
T Consensus 143 ~~G~gv~VaViDtGid~~Hp~~~~~~-------~~------------------~~~~~~~~~~~~~~~~~~----~~~~~ 193 (471)
T 3t41_A 143 PKHANTKIAIIDTGVMKNHDDLKNNF-------ST------------------DSKNLVPLNGFRGTEPEE----TGDVH 193 (471)
T ss_dssp CSSCCCCEEEEESCCCTTCTTTTTTB-------CT------------------TCEECCCTTCGGGCCTTC----CCCTT
T ss_pred CCCCCcEEEEEeCCCCCCChhHhcCc-------cc------------------CCcccccCCCccCCCccc----CCCCC
Confidence 99999999999999999999998641 11 111121111110000000 01123
Q ss_pred CCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhcCCcEEEe
Q 047013 220 TSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHDGVDIISA 299 (781)
Q Consensus 220 ~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~g~dVIN~ 299 (781)
.+.|..||||||||||+|+. .+.||||+|+|+.+|++++.. +...++++||+||+++|++||||
T Consensus 194 ~~~d~~gHGT~vAgiiaa~g------------~~~GvAp~a~l~~~kv~~~~~----~~~~~i~~ai~~a~~~g~~Vin~ 257 (471)
T 3t41_A 194 DVNDRKGHGTMVSGQTSANG------------KLIGVAPNNKFTMYRVFGSKK----TELLWVSKAIVQAANDGNQVINI 257 (471)
T ss_dssp CCCCSSSHHHHHHHHHHCBS------------SSBCSSTTSCEEEEECCSSSC----CCHHHHHHHHHHHHHTTCSEEEE
T ss_pred CCcCCCCccchhhheeecCC------------ceeEECCCCeEEEEEeccCCC----CcHHHHHHHHHHHHhCCCCEEEe
Confidence 56789999999999999863 258999999999999998754 88999999999999999999999
Q ss_pred cCCCCCC-C------------CCCChHHHHHHHHHhCCCEEEEecCCCCCCCCC------------------ccCCCCce
Q 047013 300 SLGSKPK-E------------HFESSVAVGSFHAMMHGILVVASAGNSGPAEKT------------------VDNVPPWV 348 (781)
Q Consensus 300 SlG~~~~-~------------~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~------------------~~~~~p~v 348 (781)
|||.... . ...+.+..++..+.++|++||+||||+|..... .++..+++
T Consensus 258 S~G~~~~~~~~~~~~~~~~~~~~~~~~~~ai~~a~~~Gi~vV~AAGN~g~~~~~~~~~~~~~~~~~~~~~~~~Pa~~~~v 337 (471)
T 3t41_A 258 SVGSYIILDKNDHQTFRKDEKVEYDALQKAINYAKKKKSIVVAAAGNDGIDVNDKQKLKLQREYQGNGEVKDVPASMDNV 337 (471)
T ss_dssp CCCEEEEECTTCCCSEESSCHHHHHHHHHHHHHHHHTTCEEEEECCSSCCBTTCHHHHHHTTTCCSSSEEEEETTTSTTE
T ss_pred CCCCCCCCccccccccccccchhHHHHHHHHHHHHhCCCEEEEEcCCCCcCCCcccccccccccccCCceeeccccCCCe
Confidence 9997410 0 122457788888999999999999999976542 45677899
Q ss_pred EEecccCCceeeeeeEEeCCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEec
Q 047013 349 LTVGASTTDREFSSYVTLGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYD 428 (781)
Q Consensus 349 itVgA~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~ 428 (781)
|+|||++.+
T Consensus 338 itVgA~~~~----------------------------------------------------------------------- 346 (471)
T 3t41_A 338 VTVGSTDQK----------------------------------------------------------------------- 346 (471)
T ss_dssp EEEEEECTT-----------------------------------------------------------------------
T ss_pred EEEEeeCCC-----------------------------------------------------------------------
Confidence 999985422
Q ss_pred CCcchHHHHHHHhcCceEEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCcc
Q 047013 429 AKIGDAKGQRAAQAGAVGMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMT 508 (781)
Q Consensus 429 g~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 508 (781)
+.+
T Consensus 347 -----------------------------------------------------------------------------~~~ 349 (471)
T 3t41_A 347 -----------------------------------------------------------------------------SNL 349 (471)
T ss_dssp -----------------------------------------------------------------------------SSB
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 578
Q ss_pred ccccCCCCCCCCCCCccCeeeeCCCc----------------------EEeeecCCCCCCCCCCCCCcccceeeccccch
Q 047013 509 SFFSARGPNLIDPAILKPDVIAPGVD----------------------IIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMA 566 (781)
Q Consensus 509 a~fSs~Gp~~~~~~~~KPDI~APG~~----------------------I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmA 566 (781)
++||++||+. |||+|||++ |+++++.+ .|..++|||||
T Consensus 350 a~fS~~G~~~-------~di~APG~~i~~~~~~g~~~~~~~~~~~~~~i~s~~~~~-------------~~~~~sGTS~A 409 (471)
T 3t41_A 350 SEFSNFGMNY-------TDIAAPGGSFAYLNQFGVDKWMNEGYMHKENILTTANNG-------------RYIYQAGTALA 409 (471)
T ss_dssp CTTCCBCTTT-------CCEEEECCCCHHHHHHHHHHHHHTTTHHHHSEEEECTTS-------------SEEEECSHHHH
T ss_pred CCccCCCCCC-------CeEEecCCCcccccccccccccccccccCceeEecCCCC-------------CEEeecchHHH
Confidence 9999999963 499999987 88888764 89999999999
Q ss_pred hhHHHHHHHHHHHhCC-CCCHHHHHHHHHhccccCCCCCCcccccCCCCCCCCCcccCCcccccccCCCC
Q 047013 567 CPHVAGIAGLVKTLHP-DWSPAAIKSAIMTTATTEDSSKHPILDQVTGQKATPFAYGAGHVNPNSALDPG 635 (781)
Q Consensus 567 aP~VAG~aALl~q~~p-~lt~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~in~~~Av~~~ 635 (781)
||||||++|||+|++| .++|++||++|++||++... .+...||||+||+.+|++.+
T Consensus 410 aP~VAG~aAll~~~~p~~~~~~~v~~~L~~tA~~~~~-------------~~~~~~G~G~vd~~~Al~~a 466 (471)
T 3t41_A 410 TPKVSGALALIIDKYHLEKHPDKAIELLYQHGTSKNN-------------KPFSRYGHGELDVYKALNVA 466 (471)
T ss_dssp HHHHHHHHHHHHHHHTCTTCHHHHHHHHHHHSBCCSC-------------CCHHHHTTCBBCHHHHTTTT
T ss_pred HHHHHHHHHHHHHhccCCCCHHHHHHHHHHhCCCCCC-------------CCcCccccChhCHHHHHHHH
Confidence 9999999999999999 89999999999999987532 34578999999999999954
No 7
>2p4e_P Proprotein convertase subtilisin/kexin type 9; protease, LDL receptor, LDL, endocytosis, hydrol; 1.98A {Homo sapiens}
Probab=100.00 E-value=3.7e-58 Score=526.74 Aligned_cols=339 Identities=19% Similarity=0.243 Sum_probs=57.7
Q ss_pred cEEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHhCCchhccccEEEEeccceeeEEEEeCHHHHHHHhcCCCeEEEEEc
Q 047013 29 PYVVYLGSHSHGSNPTSHDINRARIKHHEFLGSFLGSVEEAAGLIFHSYGRYINGFGAVLEEEHAKQIARHPEVVSVFLE 108 (781)
Q Consensus 29 ~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~s~~l~~~~i~~L~~~~~V~~V~~~ 108 (781)
+|||+||+.... ...+.+.+++...... .....++.+.|.+.|+||+++++++++++|+++|+|++|+++
T Consensus 77 ~YIV~lk~~~~~---------~~~~~~~~~l~a~~~~-~g~~~~v~~~y~~~~~Gfsv~l~~~~l~~L~~~P~V~~Vepd 146 (692)
T 2p4e_P 77 TYVVVLKEETHL---------SQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYIEED 146 (692)
T ss_dssp EEEEEECTTCCH---------HHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEEEEE
T ss_pred cEEEEECCCCCH---------HHHHHHHHHHHHHHhh-cccccceeeEeeccccEEEEEeCHHHHHHHHcCCCceEEEec
Confidence 899999998763 2333344444433211 112457899999999999999999999999999999999999
Q ss_pred ceecccccCCccccCcccCCCCCCccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccC
Q 047013 109 EGIDLHTTRSWEFLGLEKDNQIPPDSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCN 188 (781)
Q Consensus 109 ~~~~~~~~~s~~~~g~~~~~~~~~~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n 188 (781)
..+..+ ..+|.+..+..... . ...|..+.+|+||+|||||||||++||+|.++.. |.
T Consensus 147 ~~v~~~-~~pWgL~~i~~~~~-~-~~~w~~~~~G~GV~VaVIDTGId~~HpdL~gr~~------~~-------------- 203 (692)
T 2p4e_P 147 SSVFAQ-SIPWNLERITPPRY-R-ADEYQPPDGGSLVEVYLLDTSIQSDHREIEGRVM------VT-------------- 203 (692)
T ss_dssp EEEEEC--------------------------------------------------------------------------
T ss_pred cccccC-CCCcchhhcccccc-c-ccccccCCCCCCcEEEEEcCCCCCCChhhcCceE------ec--------------
Confidence 988652 23444333221110 1 2478888999999999999999999999986410 00
Q ss_pred ceeeeeEeccchhhhhhccCCCCCccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccc
Q 047013 189 RKLIGIRYISEGLIESCRAMNSSFLVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVC 268 (781)
Q Consensus 189 ~ki~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~ 268 (781)
+...+.+. ++. .....+.|.+||||||||||+|+. .||||+|+|+.+|++
T Consensus 204 ----~~~~~~d~----dg~--------~~~~~~~D~~GHGTHVAGiIAg~~--------------~GVAP~A~L~~vKVl 253 (692)
T 2p4e_P 204 ----DFENVPEE----DGT--------RFHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVL 253 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ----ccccccCC----CCC--------cccCCCCCCCCcHHHhhhHhhcCC--------------CccCCCCEEEEEEee
Confidence 00000000 000 001245788999999999999874 699999999999999
Q ss_pred cCCCCCCCCChHHHHHHHHHhhhc------CCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCCCc-
Q 047013 269 WKPNGANLCNAADIIAGFDVAIHD------GVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAEKTV- 341 (781)
Q Consensus 269 ~~~~~~~~~~~~~i~~ai~~a~~~------g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~- 341 (781)
++.+ .++.+++++||+|++++ +++|||||||+.. ...+..++..+.++||+||+||||+|.....+
T Consensus 254 ~~~G---~g~~s~ii~aI~~a~~~~~~~~~g~~VINmSlGg~~----s~~l~~Ai~~A~~~GVlvVaAAGN~G~~~~~~s 326 (692)
T 2p4e_P 254 NCQG---KGTVSGTLIGLEFIRKSQLVQPVGPLVVLLPLAGGY----SRVLNAACQRLARAGVVLVTAAGNFRDDACLYS 326 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCCC---CCCHHHHHHHHHHHHhhhhcccCCceEEEecCCCCC----cHHHHHHHHHHHHCCCEEEEECCCCCCCCCccC
Confidence 8876 47788999999999986 8999999999763 34566777888999999999999999765443
Q ss_pred cCCCCceEEecccCCceeeeeeEEeCCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCcee
Q 047013 342 DNVPPWVLTVGASTTDREFSSYVTLGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKG 421 (781)
Q Consensus 342 ~~~~p~vitVgA~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~g 421 (781)
++..+++|+|||++.+...
T Consensus 327 PA~~~~vItVGA~d~~~~~------------------------------------------------------------- 345 (692)
T 2p4e_P 327 PASAPEVITVGATNAQDQP------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccCCCEEEEEEEcCCCCc-------------------------------------------------------------
Confidence 5577999999996543100
Q ss_pred EEEEEecCCcchHHHHHHHhcCceEEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeec
Q 047013 422 KILICYDAKIGDAKGQRAAQAGAVGMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFN 501 (781)
Q Consensus 422 kivl~~~g~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~ 501 (781)
T Consensus 346 -------------------------------------------------------------------------------- 345 (692)
T 2p4e_P 346 -------------------------------------------------------------------------------- 345 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccCCccccccCCCCCCCCCCCccCeeeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhC
Q 047013 502 KIWSRMTSFFSARGPNLIDPAILKPDVIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLH 581 (781)
Q Consensus 502 ~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~ 581 (781)
...-+.||+|||.+ ||+|||++|+++++... ..|..++|||||||||||++|||+|++
T Consensus 346 ---a~~ss~fSn~G~~v--------DI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAPhVAG~aALlls~~ 403 (692)
T 2p4e_P 346 ---VTLGTLGTNFGRCV--------DLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAE 403 (692)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ---cccccccCCCCCce--------eEEecCCcEEeeccCCC-----------CceEeccchHHHHHHHHHHHHHHHHHC
Confidence 00112389999854 99999999999997632 279999999999999999999999999
Q ss_pred CCCCHHHHHHHHHhccccC
Q 047013 582 PDWSPAAIKSAIMTTATTE 600 (781)
Q Consensus 582 p~lt~~~ik~~L~~TA~~~ 600 (781)
|+|+|++||++|++||.+.
T Consensus 404 P~ltp~qVk~~L~~tA~~~ 422 (692)
T 2p4e_P 404 PELTLAELRQRLIHFSAKD 422 (692)
T ss_dssp -------------------
T ss_pred CCCCHHHHHHHHHHhcccc
Confidence 9999999999999999764
No 8
>1r6v_A Subtilisin-like serine protease; sandwich domain, propeptide, hydrolase; 1.70A {Fervidobacterium pennivorans} SCOP: c.41.1.1
Probab=100.00 E-value=5.1e-54 Score=496.19 Aligned_cols=379 Identities=22% Similarity=0.235 Sum_probs=273.8
Q ss_pred cCCCcEEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHhCCchhccccEEEEeccceeeEEEEeCH----HHHHHHh--c
Q 047013 25 TAKKPYVVYLGSHSHGSNPTSHDINRARIKHHEFLGSFLGSVEEAAGLIFHSYGRYINGFGAVLEE----EHAKQIA--R 98 (781)
Q Consensus 25 ~~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~s~~l~~----~~i~~L~--~ 98 (781)
..+.+|||.||+... ..++++.. +.++.+++. .+++++++++. +.+++|+ +
T Consensus 29 ~~~~~~IV~~k~~~~---------------~~~~~~~~-------g~~v~~~~~-~i~~~~~~~~~~~~~~~~~~l~~~~ 85 (671)
T 1r6v_A 29 YTEGKILVGYNDRSE---------------VDKIVKAV-------NGKVVLELP-QIKVVSIKLNGMTVKQAYDKIKALA 85 (671)
T ss_dssp BCTTEEEEEESSHHH---------------HHHHHHHH-------TCEEEEEEG-GGTEEEEECSSCCHHHHHHHHTTSC
T ss_pred cCCccEEEEECCCcC---------------HHHHHHhc-------CCeEEEEcC-CCcEEEEEeCCcCHHHHHHHHHhcc
Confidence 456899999998421 11222221 246777776 78999999865 3356776 4
Q ss_pred CCCeEEEEEcceeccccc---C------------------------CccccCcccCCCCCCccc-cccCCCCCceEEEEe
Q 047013 99 HPEVVSVFLEEGIDLHTT---R------------------------SWEFLGLEKDNQIPPDSA-WNKARFGEDVIIGNL 150 (781)
Q Consensus 99 ~~~V~~V~~~~~~~~~~~---~------------------------s~~~~g~~~~~~~~~~~~-w~~~~~G~gv~VaVI 150 (781)
+|+|++|||+..+++... . ....|++..+ ....+ |.. .+|+||+||||
T Consensus 86 ~~~V~~vepd~~~~l~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~l~~I---~~~~a~w~~-~tG~gV~VAVI 161 (671)
T 1r6v_A 86 LKGIRYVEPSYKRELIKPTVVKPNPDMYKIRKPGLNSTARDYGEELSNELWGLEAI---GVTQQLWEE-ASGTNIIVAVV 161 (671)
T ss_dssp CSSEEEEECCBCCEECCCEECCCCTTTTCSSSSCCSSSTTCCSSTTGGGCHHHHHT---TCCHHHHHH-CSCTTCEEEEE
T ss_pred CCCceEEecCeEEEeccccccCcccccccccccccccccccccccccccCCchhcc---CCchhhhhc-cCCCCCEEEEE
Confidence 899999999977654310 0 0011222222 11355 888 89999999999
Q ss_pred cCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCCccCCCCCCCCCCCCcccc
Q 047013 151 DSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSFLVPENLTTSIDHNGHGTH 230 (781)
Q Consensus 151 DtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~d~~gHGTh 230 (781)
|||||++||+|.++ ++..+.+..+ .. .|. ..+..|.+|||||
T Consensus 162 DTGVd~~HpdL~~~--------------------------~~~g~~~~~~------~~-----~p~-~~d~~d~~gHGTh 203 (671)
T 1r6v_A 162 DTGVDGTHPDLEGQ--------------------------VIAGYRPAFD------EE-----LPA-GTDSSYGGSAGTH 203 (671)
T ss_dssp ESCCBTTSGGGTTT--------------------------BCCEEEGGGT------EE-----ECT-TCBCCTTCSHHHH
T ss_pred eCCCCCCCcccccc--------------------------EEecccccCC------Cc-----CCC-CCCCccCCCcchh
Confidence 99999999999864 1111111110 00 000 1134567899999
Q ss_pred ccccccccccccccccccCCccccccCCCceEeecccccCC---CCCCCCChHHHHHHHHHhhhcCCcEEEecCCCCCCC
Q 047013 231 TLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKP---NGANLCNAADIIAGFDVAIHDGVDIISASLGSKPKE 307 (781)
Q Consensus 231 VAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~---~~~~~~~~~~i~~ai~~a~~~g~dVIN~SlG~~~~~ 307 (781)
|||||||..+ +..+.||||+|+|+.+|+++.. +.......+.+++||+||+++|++|||||||...
T Consensus 204 VAGiIAa~~n---------g~gv~GVAP~A~I~~vkv~~~~~~~~g~g~~s~~~i~~ai~~A~~~gadVIN~SlG~~~-- 272 (671)
T 1r6v_A 204 VAGTIAAKKD---------GKGIVGVAPGAKIMPIVIFDDPALVGGNGYVGDDYVAAGIIWATDHGAKVMNHSWGGWG-- 272 (671)
T ss_dssp HHHHHHCCCS---------SSSCCCSCTTSEEEEEESBCCHHHHCTTSBCCHHHHHHHHHHHHHTTCSEEEECEEBSC--
T ss_pred hhhhhhccCC---------CCceEEECCCCEEEEEEeccCccccCCCCccCHHHHHHHHHHHHHcCCCEEEeCCCCCC--
Confidence 9999999741 1235899999999999999761 1011345677999999999999999999999862
Q ss_pred CCCChHHHHHHHHHhCCCEEEEecCCCCCCC-CCccCCCCceEEecccCCceeeeeeEEeCCceEEeeeeeeccCCCCCc
Q 047013 308 HFESSVAVGSFHAMMHGILVVASAGNSGPAE-KTVDNVPPWVLTVGASTTDREFSSYVTLGNKMVIKGASIAEKGSLTQD 386 (781)
Q Consensus 308 ~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-~~~~~~~p~vitVgA~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 386 (781)
+...+..++..|.++|++||+||||+|... ..+++..+++|+|||++.+.
T Consensus 273 -~s~~l~~Ai~~A~~~GvlvVaAAGN~g~~~~~~yPA~~~~VItVgA~d~~g---------------------------- 323 (671)
T 1r6v_A 273 -YSYTMKEAFDYAMEHGVVMVVSAGNNTSDSHHQYPAGYPGVIQVAALDYYG---------------------------- 323 (671)
T ss_dssp -CCHHHHHHHHHHHHTTCEEEEECCSCSSSCCCCBTTTSTTCEEEEEEEEET----------------------------
T ss_pred -CCHHHHHHHHHHHhCCCEEEEeCCCCCCCCCccCcccCCCeEEEEEEcCCC----------------------------
Confidence 345678888999999999999999999765 45666789999999954321
Q ss_pred ceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceEEEEecCCCCccccccccccc
Q 047013 387 FYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVGMILANSREDQNISLNMVHFL 466 (781)
Q Consensus 387 ~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~ 466 (781)
T Consensus 324 -------------------------------------------------------------------------------- 323 (671)
T 1r6v_A 324 -------------------------------------------------------------------------------- 323 (671)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccCeeeeCCCcEEeeecCCCCCC
Q 047013 467 PTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPDVIAPGVDIIAAFTNEYGPS 546 (781)
Q Consensus 467 p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~ 546 (781)
....+++|||+||.+ ||+|||++|+++++......
T Consensus 324 -------------------------------------~~~~~a~fSn~G~~v--------dv~APG~~I~St~p~~~~~g 358 (671)
T 1r6v_A 324 -------------------------------------GTFRVAGFSSRSDGV--------SVGAPGVTILSTVPGEDSIG 358 (671)
T ss_dssp -------------------------------------TEEEECSSSCCCTTE--------EEEEECSSEEEECCCTTSTT
T ss_pred -------------------------------------CceeeccccCCCCCe--------eEEecCCCEEeecCCCCccc
Confidence 002478999999987 99999999999987642211
Q ss_pred C-----CCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCcccccCCCCCCCCCcc
Q 047013 547 H-----EEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTATTEDSSKHPILDQVTGQKATPFAY 621 (781)
Q Consensus 547 ~-----~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~ 621 (781)
. .......+.|..++|||||||||||++|||+|++|+|++.+||++|++||++++..| .+..|
T Consensus 359 ~~~~~~~~~~~~~~~y~~~sGTSmAAP~VAGvaALl~s~~P~lt~~~Vr~~L~~TA~~~~~~g------------~d~~~ 426 (671)
T 1r6v_A 359 YEGHNENVPATNGGTYDYYQGTSMAAPHVTGVVAVLLQKFPNAKPWQIRKLLENTAFDFNGNG------------WDHDT 426 (671)
T ss_dssp CCCCCTTCCCSSSCCEEEEESHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCBCSSSSS------------CBTTT
T ss_pred cccccccccccCCCceEEecCccHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcCCCCCC------------CCCCc
Confidence 0 001112347999999999999999999999999999999999999999999875332 24689
Q ss_pred cCCcccccccCCCCeeecCCCccc
Q 047013 622 GAGHVNPNSALDPGLVYDLGPGDY 645 (781)
Q Consensus 622 G~G~in~~~Av~~~l~~~~~~~~~ 645 (781)
|||+||+.+|++..|..+....+|
T Consensus 427 G~G~vna~~Al~~~l~~~~~~~~~ 450 (671)
T 1r6v_A 427 GYGLVKLDAALQGPLPTQGGVEEF 450 (671)
T ss_dssp BTCBCCHHHHHHCCCCSSSEEEEE
T ss_pred ccceeCHHHHhhhhcCCCCCccce
Confidence 999999999999887766554454
No 9
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=100.00 E-value=1.9e-54 Score=486.31 Aligned_cols=381 Identities=21% Similarity=0.267 Sum_probs=272.7
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSF 212 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (781)
..+|..+ |+||+|||||||||++||+|.++ ++..+++...
T Consensus 14 ~~~w~~~--g~gv~VaViDtGvd~~Hp~l~~~--------------------------~~~~~~~~~~------------ 53 (441)
T 1y9z_A 14 TVLSDSQ--AGNRTICIIDSGYDRSHNDLNAN--------------------------NVTGTNNSGT------------ 53 (441)
T ss_dssp SSSCCTT--GGGCEEEEEESCCCTTSTTTTTS--------------------------EEEECCCTTS------------
T ss_pred hhhhhcC--CCCcEEEEEcCCCCCCChhHhcC--------------------------cccCcccCCC------------
Confidence 4788765 77999999999999999999753 1111111110
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCc--eEeecccccCCCCCCCCChHHHHHHHHHhh
Q 047013 213 LVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKA--RLAAYKVCWKPNGANLCNAADIIAGFDVAI 290 (781)
Q Consensus 213 ~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A--~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~ 290 (781)
.+...+.|..||||||||||+|..+. ..+.||||+| +|+.+|+++..+ .+..+++++||+||+
T Consensus 54 ---~~~~~~~d~~gHGT~vAgiia~~~~~---------~g~~GvAP~a~~~l~~~kv~~~~g---~~~~~~~~~ai~~a~ 118 (441)
T 1y9z_A 54 ---GNWYQPGNNNAHGTHVAGTIAAIANN---------EGVVGVMPNQNANIHIVKVFNEAG---WGYSSSLVAAIDTCV 118 (441)
T ss_dssp ---CCTTCCCSSCCHHHHHHHHHHCCCSS---------SBCCCSSCSSCSEEEEEECEETTE---ECCSSCHHHHHHHHH
T ss_pred ---CCCCCCCCCCCcHHHHHHHHhcccCC---------CCceEecCCCCCEEEEEEEeCCCC---CcCHHHHHHHHHHHH
Confidence 01224568899999999999998521 2358999995 999999998765 477889999999999
Q ss_pred hc-CCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCCCccCCCCceEEecccCCceeeeeeEEeCC-
Q 047013 291 HD-GVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAEKTVDNVPPWVLTVGASTTDREFSSYVTLGN- 368 (781)
Q Consensus 291 ~~-g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~d~~~~~~~~~~~- 368 (781)
++ |++|||||||... ....+..++.++.++|++||+||||+|.....+++..+++|+|||++.+.....+...+.
T Consensus 119 ~~~g~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~VgA~~~~~~~~~~S~~g~~ 195 (441)
T 1y9z_A 119 NSGGANVVTMSLGGSG---STTTERNALNTHYNNGVLLIAAAGNAGDSSYSYPASYDSVMSVAAVDSNLDHAAFSQYTDQ 195 (441)
T ss_dssp HTTCCSEEEECCCBSC---CBHHHHHHHHHHHHTTCEEEEECCSSSSSBCCBTTTSTTEEEEEEECTTCCBCTTSCCCTT
T ss_pred HhcCCcEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCCCeEEEEEECCCCCCCccccCCCc
Confidence 99 9999999999873 234567788899999999999999999887778888899999999987754322211111
Q ss_pred ------------------ce----EEeeeeeeccCCC-CCccee--eEecccccccccCccccCCCCCC--CCCCCCcee
Q 047013 369 ------------------KM----VIKGASIAEKGSL-TQDFYP--LIAGEAAKVANVSNEDATQCKNG--TIDPEKVKG 421 (781)
Q Consensus 369 ------------------~~----~~~g~~~~~~~~~-~~~~~~--lv~~~~~~~~~~~~~~~~~c~~~--~~~~~~~~g 421 (781)
+. .+.|.+++..... ....++ +.|..+..... .......|... .++..+++|
T Consensus 196 vdv~ApG~~i~s~~~~g~g~~~~~~~~G~s~~~~~~~p~~~~~~~~~~~~~~~~~g~-~~~~~~~C~~~~~~~~~~~~~g 274 (441)
T 1y9z_A 196 VEISGPGEAILSTVTVGEGRLADITIGGQSYFSNGVVPHNRLTPSGTSYAPAPINAS-ATGALAECTVNGTSFSCGNMAN 274 (441)
T ss_dssp EEEEEECSSEEEECSTTCEEEEEEEETTEECGGGCCEECEEEEEETTEEEECCCCCE-EEEEEEEEEEETTEEECCCCTT
T ss_pred eEEEeccCCeeccccCCCcccceeecccccccccccCcccccccCCccccccccccc-cccchhccccccccccCCCccc
Confidence 11 1222222211000 000000 11111110000 01123457643 567889999
Q ss_pred EEEEEecCC------cchHHHHHHHhcCceEEEEecCCCCccc------cccccccccEEEEehhhHHHHHHHHhcCCCc
Q 047013 422 KILICYDAK------IGDAKGQRAAQAGAVGMILANSREDQNI------SLNMVHFLPTAYVNYKDGQSVYAYIYNTENP 489 (781)
Q Consensus 422 kivl~~~g~------~~~~~~~~~~~~Ga~g~i~~~~~~~~~~------~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~ 489 (781)
||+||+|+. .+.+|..+++++|+.++|++|+...... .......+|.+.++.++|+.|++++.+.
T Consensus 275 kivl~~rg~~~~~~~~~~~~~~~~~~aGa~gvii~~~~~~~g~~~~~~~~~~~~~~~p~~~v~~~~g~~l~~~~~~~--- 351 (441)
T 1y9z_A 275 KICLVERVGNQGSSYPEINSTKACKTAGAKGIIVYSNSALPGLQNPFLVDANSDITVPSVSVDRATGLALKAKLGQS--- 351 (441)
T ss_dssp EEEEEECCSCSSSSCTHHHHHHHHHHTTCSEEEEECCTTSCSCCCCEEECTTCCCCSCEEEECHHHHHHHHTTTTSE---
T ss_pred cEEEEeccccCcccccHHHHHHHHHhcCCeEEEEEeCCCccccccccccccccCccccEEEEeHHHHHHHHHHhcCC---
Confidence 999999974 5678999999999999999998642111 1123457999999999999998765321
Q ss_pred EEEEecceeeeccccCCccccccCCCCCCCCCCCccCeeeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhH
Q 047013 490 VASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPDVIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPH 569 (781)
Q Consensus 490 ~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~ 569 (781)
+ .+ ++... ..|..+|||||||||
T Consensus 352 -~-----------------------------------t~--------~~~~~-------------~~y~~~sGTSmAaP~ 374 (441)
T 1y9z_A 352 -T-----------------------------------TV--------SNQGN-------------QDYEYYNGTSMATPH 374 (441)
T ss_dssp -E-----------------------------------EE--------EEEEE-------------ESEEEECSHHHHHHH
T ss_pred -c-----------------------------------cc--------ccccC-------------CCceeecccccCCcc
Confidence 1 11 11111 289999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCcccccCCCCCCCCCcccCCcccccccCCCCeeecCCCccccccc
Q 047013 570 VAGIAGLVKTLHPDWSPAAIKSAIMTTATTEDSSKHPILDQVTGQKATPFAYGAGHVNPNSALDPGLVYDLGPGDYLAYL 649 (781)
Q Consensus 570 VAG~aALl~q~~p~lt~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~in~~~Av~~~l~~~~~~~~~~~~~ 649 (781)
|||++|||+|+||+|+|++||++||+||++++..+ ++.+||+|+||+.+|++ |+.||
T Consensus 375 VAG~aALl~~~~p~~sp~~ik~~L~~TA~~~~~~g------------~~~~~G~G~vn~~~A~~-----------~~~~l 431 (441)
T 1y9z_A 375 VSGVATLVWSYHPECSASQVRAALNATADDLSVAG------------RDNQTGYGMINAVAAKA-----------YLDES 431 (441)
T ss_dssp HHHHHHHHHHHCTTSCHHHHHHHHHHHSBCCSSSS------------CBTTTBTCBCCHHHHHH-----------HHHHC
T ss_pred cchHHHHHHHHCCCCCHHHHHHHHHhhchhhccCC------------CcccccccccCHHHHHH-----------HHHhh
Confidence 99999999999999999999999999999875443 24679999999999965 99999
Q ss_pred ccCCCc
Q 047013 650 CGLGYN 655 (781)
Q Consensus 650 ~~~g~~ 655 (781)
|++++.
T Consensus 432 c~~~~~ 437 (441)
T 1y9z_A 432 CTGPTD 437 (441)
T ss_dssp TTCC--
T ss_pred hcCCCC
Confidence 999864
No 10
>1gci_A Subtilisin; hydrolase, serine protease; 0.78A {Bacillus lentus} SCOP: c.41.1.1 PDB: 1jea_A 1ndq_A 1svn_A 1tk2_A* 3bx1_A 1ah2_A 1iav_A* 1c9m_A* 1wsd_A 1mpt_A 1ndu_A 1c9j_A 1q5p_A* 1st3_A 1c9n_A*
Probab=100.00 E-value=4.2e-52 Score=435.89 Aligned_cols=256 Identities=32% Similarity=0.465 Sum_probs=218.7
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSF 212 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (781)
..+|..+++|+||+|+|||||| .+||+|+ +...++|..+
T Consensus 14 ~~a~~~g~~G~gv~VaViDtGi-~~h~~l~----------------------------~~~~~~~~~~------------ 52 (269)
T 1gci_A 14 PAAHNRGLTGSGVKVAVLDTGI-STHPDLN----------------------------IRGGASFVPG------------ 52 (269)
T ss_dssp HHHHHTTCSCTTCEEEEEESCC-CCCTTCC----------------------------EEEEEECSTT------------
T ss_pred HHHHhcCCCCCCCEEEEECCCC-CCCHhhc----------------------------ccCCcccCCC------------
Confidence 4789999999999999999999 8999994 2233344322
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhc
Q 047013 213 LVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHD 292 (781)
Q Consensus 213 ~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~ 292 (781)
.....|..||||||||||+|..+ ...+.||||+|+|+.+|+++..+ .++.+++++||+|++++
T Consensus 53 -----~~~~~d~~gHGT~vAgiia~~~~---------~~~~~GvAp~a~l~~~~v~~~~g---~~~~~~~~~ai~~a~~~ 115 (269)
T 1gci_A 53 -----EPSTQDGNGHGTHVAGTIAALNN---------SIGVLGVAPSAELYAVKVLGASG---SGSVSSIAQGLEWAGNN 115 (269)
T ss_dssp -----CCSCSCSSSHHHHHHHHHHCCCS---------SSBCCCSSTTCEEEEEECBCTTS---CBCHHHHHHHHHHHHHT
T ss_pred -----CCCCCCCCCChHHHHHHHhcCcC---------CCCcEEeCCCCEEEEEEeECCCC---CcCHHHHHHHHHHHHHC
Confidence 11356889999999999999731 12348999999999999998766 47888999999999999
Q ss_pred CCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCCCccCCCCceEEecccCCceeeeeeEEeCCceEE
Q 047013 293 GVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAEKTVDNVPPWVLTVGASTTDREFSSYVTLGNKMVI 372 (781)
Q Consensus 293 g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~d~~~~~~~~~~~~~~~ 372 (781)
+++|||||||... ....+..++.++.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 116 ~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~--------------- 177 (269)
T 1gci_A 116 GMHVANLSLGSPS---PSATLEQAVNSATSRGVLVVAASGNSGAGSISYPARYANAMAVGATDQN--------------- 177 (269)
T ss_dssp TCSEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEEEEEECTT---------------
T ss_pred CCeEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEecCCCCCCCCcCCccCCCeEEEEeecCC---------------
Confidence 9999999999873 2356788888999999999999999998777777888999999985322
Q ss_pred eeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceEEEEecC
Q 047013 373 KGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVGMILANS 452 (781)
Q Consensus 373 ~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g~i~~~~ 452 (781)
T Consensus 178 -------------------------------------------------------------------------------- 177 (269)
T 1gci_A 178 -------------------------------------------------------------------------------- 177 (269)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccCeeeeCC
Q 047013 453 REDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPDVIAPG 532 (781)
Q Consensus 453 ~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG 532 (781)
+.++.||++||.+ ||+|||
T Consensus 178 -----------------------------------------------------~~~~~~S~~G~~~--------di~APG 196 (269)
T 1gci_A 178 -----------------------------------------------------NNRASFSQYGAGL--------DIVAPG 196 (269)
T ss_dssp -----------------------------------------------------SCBCTTCCCSTTE--------EEEEEC
T ss_pred -----------------------------------------------------CCCCCCCCCCCCc--------ceEecC
Confidence 4778999999976 999999
Q ss_pred CcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCcccccCC
Q 047013 533 VDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTATTEDSSKHPILDQVT 612 (781)
Q Consensus 533 ~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~~~~~~g~~~~~~~~ 612 (781)
++|+++++.+ .|..++|||||||||||++|||+|++|+|++.|||++|++||++++
T Consensus 197 ~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~~t~~~v~~~L~~tA~~~g----------- 252 (269)
T 1gci_A 197 VNVQSTYPGS-------------TYASLNGTSMATPHVAGAAALVKQKNPSWSNVQIRNHLKNTATSLG----------- 252 (269)
T ss_dssp SSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHTSBCCS-----------
T ss_pred CCeEeecCCC-------------CEEEcCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCC-----------
Confidence 9999998764 8999999999999999999999999999999999999999998763
Q ss_pred CCCCCCCcccCCcccccccCC
Q 047013 613 GQKATPFAYGAGHVNPNSALD 633 (781)
Q Consensus 613 ~~~~~~~~~G~G~in~~~Av~ 633 (781)
+++.||+|+||+.+|++
T Consensus 253 ----~~~~~G~G~vn~~~A~~ 269 (269)
T 1gci_A 253 ----STNLYGSGLVNAEAATR 269 (269)
T ss_dssp ----CHHHHTTCBCCHHHHTC
T ss_pred ----CCCCcccCccCHHHHcC
Confidence 24689999999999985
No 11
>4h6x_A Thiazoline oxidase/subtilisin-like protease; hydrolase; 2.00A {Prochloron didemni} PDB: 4aks_A 4akt_A
Probab=100.00 E-value=1.1e-53 Score=466.69 Aligned_cols=308 Identities=22% Similarity=0.254 Sum_probs=201.8
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhh--ccCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESC--RAMNS 210 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~--~~~~~ 210 (781)
.++|.++..|++|+|||||||||++||+|++....+....|+..++.........+..+.... ..++.... ....
T Consensus 21 ~~~w~~~~g~~~V~VaViDtGiD~~Hpdf~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~- 97 (357)
T 4h6x_A 21 ADLHNQTLGDPQITIVIIDGDPDYTLSCFEGAEVSKVFPYWHEPAEPITPEDYAAFQSIRDQG--LKGKEKEEALEAVI- 97 (357)
T ss_dssp HHHHHHCSCCTTSEEEEEESCCCTTSGGGTTCEEEECCCTTSCCCCCCCHHHHHHHHHHHHHT--CCSHHHHHHHHHHC-
T ss_pred HHHHHhcCCCCCCEEEEEcCCCCCCChhHcCCCcccccccccccccccCcccccccccccCcc--cccccccccccccc-
Confidence 489999999999999999999999999999877777777787765533200000000000000 00000000 0000
Q ss_pred CCccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCC--CCCCChHHHHHHHHH
Q 047013 211 SFLVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNG--ANLCNAADIIAGFDV 288 (781)
Q Consensus 211 ~~~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~--~~~~~~~~i~~ai~~ 288 (781)
| +...+.|.+||||||||||||+.. +.+.||||+|+|+.+|++..... ...+...++++||+|
T Consensus 98 ----~-~~~~~~D~~gHGThVAGiiag~~~----------~g~~GvAp~a~l~~~k~~~~~~~~~~~~~~~~~~~~ai~~ 162 (357)
T 4h6x_A 98 ----P-DTKDRIVLNDHACHVTSTIVGQEH----------SPVFGIAPNCRVINMPQDAVIRGNYDDVMSPLNLARAIDL 162 (357)
T ss_dssp ----T-TTHHHHHHHHHHHHHHHHHHCCTT----------SSCCCSCTTSEEEEEECTTC----------CHHHHHHHHH
T ss_pred ----C-CCCCCcCCCCcHHHHHHHHhccCC----------CCceEeeccceEEeeeecccCCCCccccccHHHHHHHHHH
Confidence 0 122456788999999999999742 23589999999999999754321 112455678999999
Q ss_pred hhhcCCcEEEecCCCCC-CCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCCCccCCCCceEEecccCCceeeeeeEEeC
Q 047013 289 AIHDGVDIISASLGSKP-KEHFESSVAVGSFHAMMHGILVVASAGNSGPAEKTVDNVPPWVLTVGASTTDREFSSYVTLG 367 (781)
Q Consensus 289 a~~~g~dVIN~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~d~~~~~~~~~~ 367 (781)
|++.|++|||||||... .....+.+..++.++.++|++||+||||+|.....+++..+++|+|||++.+
T Consensus 163 a~~~g~~Vin~S~G~~~~~~~~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~---------- 232 (357)
T 4h6x_A 163 ALELGANIIHCAFCRPTQTSEGEEILVQAIKKCQDNNVLIVSPTGNNSNESWCLPAVLPGTLAVGAAKVD---------- 232 (357)
T ss_dssp HHHTTCSEEEEC-----------CHHHHHHHHHHHTTCEEEEECC---------------CEEEEEECTT----------
T ss_pred HHHcCCCEEeeccccCCccccchhHHHHHHHHHhhCCeEEEecccCCCCCcCcCcccCCCCceEEEeccC----------
Confidence 99999999999999863 3345667888899999999999999999998877777888999999985432
Q ss_pred CceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceEE
Q 047013 368 NKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVGM 447 (781)
Q Consensus 368 ~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g~ 447 (781)
T Consensus 233 -------------------------------------------------------------------------------- 232 (357)
T 4h6x_A 233 -------------------------------------------------------------------------------- 232 (357)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccCe
Q 047013 448 ILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPD 527 (781)
Q Consensus 448 i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPD 527 (781)
+.++.|||||+.. .|||
T Consensus 233 ----------------------------------------------------------~~~~~fSn~G~~~-----~~~d 249 (357)
T 4h6x_A 233 ----------------------------------------------------------GTPCHFSNWGGNN-----TKEG 249 (357)
T ss_dssp ----------------------------------------------------------SSBCTTCC---CT-----TTTE
T ss_pred ----------------------------------------------------------CcccccccCCCCC-----Cccc
Confidence 5789999999653 5899
Q ss_pred eeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHh----CCCCCHHHHHHHHHhccccCCCC
Q 047013 528 VIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTL----HPDWSPAAIKSAIMTTATTEDSS 603 (781)
Q Consensus 528 I~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~p~lt~~~ik~~L~~TA~~~~~~ 603 (781)
|+|||++|+++++.+. .|..++|||||||||||++|||+++ +|.|+++|||++|++||++++..
T Consensus 250 i~APG~~i~s~~~~~~------------~~~~~sGTS~AaP~vaG~~All~s~~~~~~~~lt~~~v~~~L~~tA~~~~~~ 317 (357)
T 4h6x_A 250 ILAPGEEILGAQPCTE------------EPVRLTGTSMAAPVMTGISALLMSLQVQQGKPVDAEAVRTALLKTAIPCDPE 317 (357)
T ss_dssp EEEECSSEEECCTTCS------------CCEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHC-------
T ss_pred eeecCCCeEeccCCCC------------cccccCcHHHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHhhCccCCCC
Confidence 9999999999987642 6778999999999999999999964 66899999999999999987432
Q ss_pred CCcccccCCCCCCCCCcccCCcccccccCC
Q 047013 604 KHPILDQVTGQKATPFAYGAGHVNPNSALD 633 (781)
Q Consensus 604 g~~~~~~~~~~~~~~~~~G~G~in~~~Av~ 633 (781)
+ ...+.+||+|+||+.+|++
T Consensus 318 ~----------~~~~~~~G~G~vn~~~A~~ 337 (357)
T 4h6x_A 318 V----------VEEPERCLRGFVNIPGAMK 337 (357)
T ss_dssp -----------------CTTCBCCHHHHHH
T ss_pred C----------CCCcccceeEEecHHHHHH
Confidence 1 2345689999999999998
No 12
>1r0r_E Subtilisin carlsberg; high resolution, serine protease, protein inhibitor, hydrolase; 1.10A {Bacillus licheniformis} SCOP: c.41.1.1 PDB: 1af4_A* 1be8_A* 1bfk_A 1bfu_A 1be6_A 1oyv_A 1cse_E 1sbc_A 1sca_A 1scb_A 1scd_A 2sec_E 2wuv_A 2wuw_E 1yu6_A 1scn_E* 1c3l_A 1avt_A* 1av7_A* 1sel_A ...
Probab=100.00 E-value=3.3e-52 Score=438.42 Aligned_cols=257 Identities=30% Similarity=0.454 Sum_probs=216.7
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSF 212 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (781)
..+|..+++|+||+|+|||||||++||+|+ +...+.|..+
T Consensus 14 ~~~~~~g~~G~gv~VaViDtGid~~h~~l~----------------------------~~~g~~~~~~------------ 53 (274)
T 1r0r_E 14 DKVQAQGFKGANVKVAVLDTGIQASHPDLN----------------------------VVGGASFVAG------------ 53 (274)
T ss_dssp HHHHHHTCSCTTCEEEEEESCCCTTCTTCC----------------------------EEEEEECSTT------------
T ss_pred HHHHhcCCCCCCCEEEEEcCCCCCCCHhHc----------------------------CCCCccccCC------------
Confidence 478999999999999999999999999994 2233344322
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhc
Q 047013 213 LVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHD 292 (781)
Q Consensus 213 ~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~ 292 (781)
.....|..||||||||||+|..+ ...+.||||+|+|+.+|+++..+ .++.+++++||+|++++
T Consensus 54 -----~~~~~d~~gHGT~vAgiia~~~~---------~~g~~GvAp~a~l~~~~v~~~~g---~~~~~~i~~ai~~a~~~ 116 (274)
T 1r0r_E 54 -----EAYNTDGNGHGTHVAGTVAALDN---------TTGVLGVAPSVSLYAVKVLNSSG---SGSYSGIVSGIEWATTN 116 (274)
T ss_dssp -----CCTTCCSSSHHHHHHHHHHCCSS---------SSBCCCSSTTSEEEEEECSCTTS---EECHHHHHHHHHHHHHT
T ss_pred -----CCCCCCCCCCHHHHHHHHHccCC---------CCceEEECCCCEEEEEEEECCCC---CccHHHHHHHHHHHHHc
Confidence 11346789999999999999731 12358999999999999998766 47788999999999999
Q ss_pred CCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCC----CCccCCCCceEEecccCCceeeeeeEEeCC
Q 047013 293 GVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAE----KTVDNVPPWVLTVGASTTDREFSSYVTLGN 368 (781)
Q Consensus 293 g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVgA~~~d~~~~~~~~~~~ 368 (781)
+++|||||||... ....+..++.++.++|+++|+||||+|... ..++...+++|+|||++.
T Consensus 117 ~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~------------ 181 (274)
T 1r0r_E 117 GMDVINMSLGGAS---GSTAMKQAVDNAYARGVVVVAAAGNSGNSGSTNTIGYPAKYDSVIAVGAVDS------------ 181 (274)
T ss_dssp TCSEEEECEEBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTCCCCCBTTTSTTSEEEEEECT------------
T ss_pred CCCEEEeCCCCCC---CcHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCccccCCCCCCcEEEEEEecC------------
Confidence 9999999999873 245678888899999999999999999753 334556789999998432
Q ss_pred ceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceEEE
Q 047013 369 KMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVGMI 448 (781)
Q Consensus 369 ~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g~i 448 (781)
T Consensus 182 -------------------------------------------------------------------------------- 181 (274)
T 1r0r_E 182 -------------------------------------------------------------------------------- 181 (274)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccCee
Q 047013 449 LANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPDV 528 (781)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI 528 (781)
.+.++.||++||.+ ||
T Consensus 182 --------------------------------------------------------~~~~~~~S~~G~~~--------di 197 (274)
T 1r0r_E 182 --------------------------------------------------------NSNRASFSSVGAEL--------EV 197 (274)
T ss_dssp --------------------------------------------------------TSCBCTTCCCSTTE--------EE
T ss_pred --------------------------------------------------------CCCcCccCCCCCCc--------eE
Confidence 24778999999865 99
Q ss_pred eeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCccc
Q 047013 529 IAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTATTEDSSKHPIL 608 (781)
Q Consensus 529 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~~~~~~g~~~~ 608 (781)
+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 198 ~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------- 257 (274)
T 1r0r_E 198 MAPGAGVYSTYPTN-------------TYATLNGTSMASPHVAGAAALILSKHPNLSASQVRNRLSSTATYLG------- 257 (274)
T ss_dssp EEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTCBCCS-------
T ss_pred EeCCCCeEeecCCC-------------CEEEeccHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhCcccC-------
Confidence 99999999998764 8999999999999999999999999999999999999999998763
Q ss_pred ccCCCCCCCCCcccCCcccccccCC
Q 047013 609 DQVTGQKATPFAYGAGHVNPNSALD 633 (781)
Q Consensus 609 ~~~~~~~~~~~~~G~G~in~~~Av~ 633 (781)
++..||+|+||+.+|++
T Consensus 258 --------~~~~~G~G~~~~~~A~~ 274 (274)
T 1r0r_E 258 --------SSFYYGKGLINVEAAAQ 274 (274)
T ss_dssp --------CHHHHTTCBCCHHHHTC
T ss_pred --------CCCCcccCccCHHHHhC
Confidence 24689999999999985
No 13
>1dbi_A AK.1 serine protease; hydrolase; 1.80A {Bacillus SP} SCOP: c.41.1.1
Probab=100.00 E-value=1.1e-51 Score=435.71 Aligned_cols=259 Identities=29% Similarity=0.372 Sum_probs=213.1
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSF 212 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (781)
..+|..+..|+||+|||||||||++||+|.++ ++..++|.++
T Consensus 21 ~~aw~~~~g~~gv~VaViDtGvd~~hp~l~~~--------------------------~~~~~~~~~~------------ 62 (280)
T 1dbi_A 21 DYAWDVTKGSSGQEIAVIDTGVDYTHPDLDGK--------------------------VIKGYDFVDN------------ 62 (280)
T ss_dssp HHHTTTCCCCTTCEEEEEESCCCTTSTTTTTT--------------------------EEEEEETTTT------------
T ss_pred HHHHhhcCCCCCCEEEEEeCCcCCCChhhccC--------------------------cccceeccCC------------
Confidence 47999988888999999999999999999753 4444555432
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhc
Q 047013 213 LVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHD 292 (781)
Q Consensus 213 ~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~ 292 (781)
...+.|..||||||||||+|...++ ..+.||||+|+|+.+|+++..+ .++.+++++||+||+++
T Consensus 63 -----~~~~~d~~gHGT~vAgiia~~~~~~--------~g~~GvAp~a~l~~~kv~~~~g---~~~~~~i~~ai~~a~~~ 126 (280)
T 1dbi_A 63 -----DYDPMDLNNHGTHVAGIAAAETNNA--------TGIAGMAPNTRILAVRALDRNG---SGTLSDIADAIIYAADS 126 (280)
T ss_dssp -----BSCCCCSSSHHHHHHHHHHCCCSSS--------SSCCCSSSSCEEEEEECCCTTS---CCCHHHHHHHHHHHHHT
T ss_pred -----CCCCCCCCCcHHHHHHHHhCcCCCC--------CcceEeCCCCEEEEEEEECCCC---CcCHHHHHHHHHHHHHC
Confidence 1245688999999999999986432 2248999999999999998766 47889999999999999
Q ss_pred CCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCCCccCCCCceEEecccCCceeeeeeEEeCCceEE
Q 047013 293 GVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAEKTVDNVPPWVLTVGASTTDREFSSYVTLGNKMVI 372 (781)
Q Consensus 293 g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~d~~~~~~~~~~~~~~~ 372 (781)
|++|||||||... ....+..++..+.++|++||+||||+|.....++...+++|+|||++.+
T Consensus 127 g~~Vin~S~G~~~---~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~--------------- 188 (280)
T 1dbi_A 127 GAEVINLSLGCDC---HTTTLENAVNYAWNKGSVVVAAAGNNGSSTTFEPASYENVIAVGAVDQY--------------- 188 (280)
T ss_dssp TCSEEEECCSSCC---CCHHHHHHHHHHHHTTCEEEEECCBC---------CCTTSEEEEEECTT---------------
T ss_pred CCCEEEeCCCCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCCeEEEEeeCCC---------------
Confidence 9999999999873 3456788888999999999999999998766777788999999985422
Q ss_pred eeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceEEEEecC
Q 047013 373 KGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVGMILANS 452 (781)
Q Consensus 373 ~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g~i~~~~ 452 (781)
T Consensus 189 -------------------------------------------------------------------------------- 188 (280)
T 1dbi_A 189 -------------------------------------------------------------------------------- 188 (280)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccCeeeeCC
Q 047013 453 REDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPDVIAPG 532 (781)
Q Consensus 453 ~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG 532 (781)
+.++.||++||.+ ||+|||
T Consensus 189 -----------------------------------------------------~~~~~~S~~G~~~--------dv~ApG 207 (280)
T 1dbi_A 189 -----------------------------------------------------DRLASFSNYGTWV--------DVVAPG 207 (280)
T ss_dssp -----------------------------------------------------SCBCTTBCCSTTC--------CEEEEC
T ss_pred -----------------------------------------------------CCcCCCCCCCCCc--------eEEEec
Confidence 4788999999876 999999
Q ss_pred CcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCcccccCC
Q 047013 533 VDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTATTEDSSKHPILDQVT 612 (781)
Q Consensus 533 ~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~~~~~~g~~~~~~~~ 612 (781)
++|+++++.+ .|..++|||||||||||++|||++ |.+++.+||++|++||+++...
T Consensus 208 ~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~--p~~t~~~v~~~L~~ta~~~~~~--------- 263 (280)
T 1dbi_A 208 VDIVSTITGN-------------RYAYMSGTSMASPHVAGLAALLAS--QGRNNIEIRQAIEQTADKISGT--------- 263 (280)
T ss_dssp SSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHH--TTCCHHHHHHHHHHTSBCCTTB---------
T ss_pred CCeEeecCCC-------------CEEEccCHHHHHHHHHHHHHHHHC--CCCCHHHHHHHHHHhCccCCCC---------
Confidence 9999998764 899999999999999999999987 8999999999999999987421
Q ss_pred CCCCCCCcccCCcccccccCC
Q 047013 613 GQKATPFAYGAGHVNPNSALD 633 (781)
Q Consensus 613 ~~~~~~~~~G~G~in~~~Av~ 633 (781)
...||+|+||+.+|++
T Consensus 264 -----~~~~G~G~vn~~~A~~ 279 (280)
T 1dbi_A 264 -----GTYFKYGRINSYNAVT 279 (280)
T ss_dssp -----TTTBSSEECCHHHHHT
T ss_pred -----CCcccCCEECHHHHhc
Confidence 2579999999999986
No 14
>1to2_E Subtilisin BPN'; serine protease, hydrolase; HET: CIT 15P; 1.30A {Bacillus amyloliquefaciens} SCOP: c.41.1.1 PDB: 1tm1_E* 1tm3_E* 1tm4_E* 1lw6_E* 1tm7_E* 1tmg_E* 1to1_E* 1tm5_E* 1y1k_E* 1y33_E* 1y34_E* 1y3b_E* 1y3c_E* 1y3d_E* 1y3f_E* 1y48_E* 1y4a_E* 1y4d_E 1sup_A* 1sib_E ...
Probab=100.00 E-value=2.1e-51 Score=433.69 Aligned_cols=259 Identities=32% Similarity=0.450 Sum_probs=217.5
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSF 212 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (781)
..+|..+++|+||+|||||||||++||+|+. ...+.|..+
T Consensus 14 ~~~~~~g~~G~gv~VaViDtGid~~h~~l~~----------------------------~~g~~~~~~------------ 53 (281)
T 1to2_E 14 PALHSQGYTGSNVKVAVIDSGIDSSHPDLKV----------------------------AGGASMVPS------------ 53 (281)
T ss_dssp HHHHHHTCSCTTCEEEEEESCCCTTCTTCCE----------------------------EEEEECCTT------------
T ss_pred HHHHhcCCCCCCCEEEEEcCCCCCCCHHHcC----------------------------cCCccccCC------------
Confidence 4789999999999999999999999999952 222333321
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhc
Q 047013 213 LVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHD 292 (781)
Q Consensus 213 ~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~ 292 (781)
+..+..|..||||||||||+|..+ ...+.||||+|+|+.+|+++..+ .+..++++++|+|++++
T Consensus 54 ----~~~~~~d~~gHGT~vAgiia~~~~---------~~g~~GvAp~a~l~~~kv~~~~g---~~~~~~i~~ai~~a~~~ 117 (281)
T 1to2_E 54 ----ETNPFQDNNSHGTHVAGTVAALNN---------SIGVLGVAPSASLYAVKVLGADG---SGQYSWIINGIEWAIAN 117 (281)
T ss_dssp ----CCCTTCCSSSHHHHHHHHHHCCSS---------SSSBCCSSTTSEEEEEECSCTTS---EECHHHHHHHHHHHHHT
T ss_pred ----CCCCCCCCCCcHHHHHHHHhccCC---------CCcceeeCCCCEEEEEEEeCCCC---CccHHHHHHHHHHHHHC
Confidence 011236789999999999999731 12358999999999999998766 46788999999999999
Q ss_pred CCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCC----CCccCCCCceEEecccCCceeeeeeEEeCC
Q 047013 293 GVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAE----KTVDNVPPWVLTVGASTTDREFSSYVTLGN 368 (781)
Q Consensus 293 g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~----~~~~~~~p~vitVgA~~~d~~~~~~~~~~~ 368 (781)
+++|||||||... ....+..++.++.++|++||+||||+|... ..++...|++|+|||++.
T Consensus 118 ~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~Pa~~~~vi~Vga~~~------------ 182 (281)
T 1to2_E 118 NMDVINMSLGGPS---GSAALKAAVDKAVASGVVVVAAAGNEGTSGSSSTVGYPGKYPSVIAVGAVDS------------ 182 (281)
T ss_dssp TCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSCCCCTTSCCCCBTTTSTTSEEEEEECT------------
T ss_pred CCcEEEECCcCCC---CCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCccccCcCCCCEEEEEEecC------------
Confidence 9999999999873 245678888899999999999999999753 344556789999998432
Q ss_pred ceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceEEE
Q 047013 369 KMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVGMI 448 (781)
Q Consensus 369 ~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g~i 448 (781)
T Consensus 183 -------------------------------------------------------------------------------- 182 (281)
T 1to2_E 183 -------------------------------------------------------------------------------- 182 (281)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccCee
Q 047013 449 LANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPDV 528 (781)
Q Consensus 449 ~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI 528 (781)
.+.++.||++||.+ ||
T Consensus 183 --------------------------------------------------------~~~~~~fS~~G~~~--------di 198 (281)
T 1to2_E 183 --------------------------------------------------------SNQRASFSSVGPEL--------DV 198 (281)
T ss_dssp --------------------------------------------------------TSCBCTTCCCSTTC--------CE
T ss_pred --------------------------------------------------------CCCcCCcCCCCCCc--------eE
Confidence 25788999999976 99
Q ss_pred eeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCccc
Q 047013 529 IAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTATTEDSSKHPIL 608 (781)
Q Consensus 529 ~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~~~~~~g~~~~ 608 (781)
+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++++||++|++||+++.
T Consensus 199 ~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~g------- 258 (281)
T 1to2_E 199 MAPGVSIQSTLPGN-------------KYGAYNGTSMASPHVAGAAALILSKHPNWTNTQVRSSLENTTTKLG------- 258 (281)
T ss_dssp EEECSSEEEEETTT-------------EEEEECBHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHTTCBCCS-------
T ss_pred EecCCCeEeecCCC-------------CEEecCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcccC-------
Confidence 99999999998764 7999999999999999999999999999999999999999998763
Q ss_pred ccCCCCCCCCCcccCCcccccccCCC
Q 047013 609 DQVTGQKATPFAYGAGHVNPNSALDP 634 (781)
Q Consensus 609 ~~~~~~~~~~~~~G~G~in~~~Av~~ 634 (781)
+++.||||+||+.+|++.
T Consensus 259 --------~~~~~G~G~v~~~~a~~~ 276 (281)
T 1to2_E 259 --------DSFYYGKGLINVQAAAQH 276 (281)
T ss_dssp --------CHHHHTTCBCCHHHHTSS
T ss_pred --------CCCCcccceecHHHHhhh
Confidence 246899999999999985
No 15
>1thm_A Thermitase; hydrolase(serine protease); 1.37A {Thermoactinomyces vulgaris} SCOP: c.41.1.1 PDB: 2tec_E 1tec_E 3tec_E
Probab=100.00 E-value=6e-51 Score=429.97 Aligned_cols=258 Identities=30% Similarity=0.406 Sum_probs=219.4
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSF 212 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (781)
..+|... +|+||+|||||||||++||+|.++ ++..++|.++
T Consensus 21 ~~aw~~~-~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~~------------ 61 (279)
T 1thm_A 21 PQAWDIA-EGSGAKIAIVDTGVQSNHPDLAGK--------------------------VVGGWDFVDN------------ 61 (279)
T ss_dssp HHHHTTC-CCTTCEEEEEESCCCTTCTTTTTT--------------------------EEEEEETTTT------------
T ss_pred HHHHhcC-CCCCCEEEEEccCCCCCCcchhcC--------------------------ccccccccCC------------
Confidence 4789887 799999999999999999999753 4445555432
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhc
Q 047013 213 LVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHD 292 (781)
Q Consensus 213 ~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~ 292 (781)
...+.|..||||||||||+|...++. .+.||||+|+|+.+|+++..+ .++.+++++||+||+++
T Consensus 62 -----~~~~~d~~gHGT~vAgiia~~~~n~~--------g~~GvAp~a~l~~~~v~~~~g---~~~~~~~~~ai~~a~~~ 125 (279)
T 1thm_A 62 -----DSTPQNGNGHGTHCAGIAAAVTNNST--------GIAGTAPKASILAVRVLDNSG---SGTWTAVANGITYAADQ 125 (279)
T ss_dssp -----BSCCCCSSSHHHHHHHHHHCCCSSSS--------SCCCSSTTCEEEEEECSCTTS---CCCHHHHHHHHHHHHHT
T ss_pred -----CCCCCCCCCcHHHHHHHHhCccCCCC--------ccEEeCCCCEEEEEEeeCCCC---CccHHHHHHHHHHHHHC
Confidence 12456789999999999999864322 248999999999999998776 47788999999999999
Q ss_pred CCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCCCccCCCCceEEecccCCceeeeeeEEeCCceEE
Q 047013 293 GVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAEKTVDNVPPWVLTVGASTTDREFSSYVTLGNKMVI 372 (781)
Q Consensus 293 g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~d~~~~~~~~~~~~~~~ 372 (781)
|++|||||||... ....+..++.++.++|+++|+||||+|.....++...+++|+|||++.+
T Consensus 126 g~~Vin~S~G~~~---~~~~l~~ai~~a~~~gvlvV~AAGN~g~~~~~~Pa~~~~vi~Vga~~~~--------------- 187 (279)
T 1thm_A 126 GAKVISLSLGGTV---GNSGLQQAVNYAWNKGSVVVAAAGNAGNTAPNYPAYYSNAIAVASTDQN--------------- 187 (279)
T ss_dssp TCSEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSSSSCCCCBTTTSTTEEEEEEECTT---------------
T ss_pred CCCEEEEecCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEEEEEeCCC---------------
Confidence 9999999999873 2456788888999999999999999998777778888999999985422
Q ss_pred eeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceEEEEecC
Q 047013 373 KGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVGMILANS 452 (781)
Q Consensus 373 ~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g~i~~~~ 452 (781)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 1thm_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccCeeeeCC
Q 047013 453 REDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPDVIAPG 532 (781)
Q Consensus 453 ~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG 532 (781)
+.++.||++||.+ ||+|||
T Consensus 188 -----------------------------------------------------~~~~~fS~~G~~~--------dv~APG 206 (279)
T 1thm_A 188 -----------------------------------------------------DNKSSFSTYGSWV--------DVAAPG 206 (279)
T ss_dssp -----------------------------------------------------SCBCTTCCCCTTC--------CEEEEC
T ss_pred -----------------------------------------------------CCcCCcCCCCCce--------EEEEcC
Confidence 4778999999876 999999
Q ss_pred CcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCcccccCC
Q 047013 533 VDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTATTEDSSKHPILDQVT 612 (781)
Q Consensus 533 ~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~~~~~~g~~~~~~~~ 612 (781)
++|+++++.+ .|..++|||||||||||++||| ++|.+++++||++|++||+++...+
T Consensus 207 ~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll--~~p~~t~~~v~~~L~~ta~~~~~~~-------- 263 (279)
T 1thm_A 207 SSIYSTYPTS-------------TYASLSGTSMATPHVAGVAGLL--ASQGRSASNIRAAIENTADKISGTG-------- 263 (279)
T ss_dssp SSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHH--HTTTCCHHHHHHHHHHTCBCCTTBT--------
T ss_pred CCeEEEeCCC-------------CEEEcccHHHHHHHHHHHHHHH--HCCCcCHHHHHHHHHHhCccCCCCC--------
Confidence 9999998764 8999999999999999999999 5899999999999999999874321
Q ss_pred CCCCCCCcccCCcccccccCC
Q 047013 613 GQKATPFAYGAGHVNPNSALD 633 (781)
Q Consensus 613 ~~~~~~~~~G~G~in~~~Av~ 633 (781)
..||+|+||+.+|++
T Consensus 264 ------~~~G~G~vn~~~A~~ 278 (279)
T 1thm_A 264 ------TYWAKGRVNAYKAVQ 278 (279)
T ss_dssp ------TTBSSEECCHHHHHH
T ss_pred ------ccccCCeeCHHHHhc
Confidence 478999999999975
No 16
>2x8j_A Intracellular subtilisin protease; hydrolase, serine protease, intracellular proteinase regulat; HET: CSX 1PE; 1.56A {Bacillus clausii} PDB: 2wv7_A 2wwt_A 2xrm_A*
Probab=100.00 E-value=1.6e-51 Score=443.83 Aligned_cols=265 Identities=27% Similarity=0.342 Sum_probs=217.3
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSF 212 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (781)
..+|..+++|+||+|||||||||++||+|.++ +.+.++|..++...
T Consensus 31 ~~aw~~~~~G~gv~VaViDtGid~~Hp~l~~~--------------------------~~~~~~~~~~~~~~-------- 76 (327)
T 2x8j_A 31 PAVWRASAKGAGQIIGVIDTGCQVDHPDLAER--------------------------IIGGVNLTTDYGGD-------- 76 (327)
T ss_dssp HHHHHHHGGGTTCEEEEEESCCCTTCTTTGGG--------------------------EEEEEECSSGGGGC--------
T ss_pred HHHHhcCCCCCCCEEEEEcCCCCCCChhHhhc--------------------------ccCCccccCCCCCC--------
Confidence 47999999999999999999999999999753 55556666543211
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhh-
Q 047013 213 LVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIH- 291 (781)
Q Consensus 213 ~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~- 291 (781)
.....|..||||||||||+|..+ +..+.||||+|+|+.+|+++..+ .++.+++++||+||++
T Consensus 77 -----~~~~~d~~gHGT~VAgiia~~~~---------~~g~~GvAp~a~l~~~kv~~~~g---~~~~~~i~~ai~~a~~~ 139 (327)
T 2x8j_A 77 -----ETNFSDNNGHGTHVAGTVAAAET---------GSGVVGVAPKADLFIIKALSGDG---SGEMGWIAKAIRYAVDW 139 (327)
T ss_dssp -----TTCCCCSSSHHHHHHHHHHCCCC---------SSBCCCSSTTCEEEEEECSCTTS---EECHHHHHHHHHHHHHC
T ss_pred -----CCCCCCCCCchHHHHHHHhccCC---------CCCcEeeCCCCEEEEEEeECCCC---CcCHHHHHHHHHHHHhh
Confidence 12356889999999999999841 12358999999999999998766 4678899999999999
Q ss_pred -----cCCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCC-----CCccCCCCceEEecccCCceeee
Q 047013 292 -----DGVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAE-----KTVDNVPPWVLTVGASTTDREFS 361 (781)
Q Consensus 292 -----~g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~-----~~~~~~~p~vitVgA~~~d~~~~ 361 (781)
.+++|||||||... ....+..++..+.++|++||+||||+|... ..++...+++|+|||++.+
T Consensus 140 ~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~~~~~Pa~~~~vi~Vga~~~~---- 212 (327)
T 2x8j_A 140 RGPKGEQMRIITMSLGGPT---DSEELHDAVKYAVSNNVSVVCAAGNEGDGREDTNEFAYPAAYNEVIAVGAVDFD---- 212 (327)
T ss_dssp CCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCCT---------TCBTTTSTTSEEEEEECTT----
T ss_pred cccccCCceEEEECCCcCC---CCHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCceeccccCCCEEEEEEECCC----
Confidence 89999999999873 235678888899999999999999999652 3455567899999985422
Q ss_pred eeEEeCCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHh
Q 047013 362 SYVTLGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQ 441 (781)
Q Consensus 362 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~ 441 (781)
T Consensus 213 -------------------------------------------------------------------------------- 212 (327)
T 2x8j_A 213 -------------------------------------------------------------------------------- 212 (327)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceEEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCC
Q 047013 442 AGAVGMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDP 521 (781)
Q Consensus 442 ~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~ 521 (781)
+.++.||++||.+
T Consensus 213 ----------------------------------------------------------------~~~~~fS~~G~~~--- 225 (327)
T 2x8j_A 213 ----------------------------------------------------------------LRLSDFTNTNEEI--- 225 (327)
T ss_dssp ----------------------------------------------------------------CCBSCC---CCCC---
T ss_pred ----------------------------------------------------------------CCCCCccCCCCCc---
Confidence 5788999999865
Q ss_pred CCccCeeeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHh-----CCCCCHHHHHHHHHhc
Q 047013 522 AILKPDVIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTL-----HPDWSPAAIKSAIMTT 596 (781)
Q Consensus 522 ~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-----~p~lt~~~ik~~L~~T 596 (781)
||+|||++|+++++.+ .|..++|||||||||||++|||+|+ +|.+++.+||++|++|
T Consensus 226 -----di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~~~~~~p~ls~~~v~~~L~~t 287 (327)
T 2x8j_A 226 -----DIVAPGVGIKSTYLDS-------------GYAELSGTAMAAPHVAGALALIINLAEDAFKRSLSETEIYAQLVRR 287 (327)
T ss_dssp -----SEEEECSSEEEECSTT-------------CEEEEESGGGTHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHTT
T ss_pred -----eEecCcCceEeecCCC-------------CEEeecCHHHHHHHHHHHHHHHHHhhhhhcCCCCCHHHHHHHHHHh
Confidence 9999999999998764 7999999999999999999999999 9999999999999999
Q ss_pred cccCCCCCCcccccCCCCCCCCCcccCCcccccccCCC
Q 047013 597 ATTEDSSKHPILDQVTGQKATPFAYGAGHVNPNSALDP 634 (781)
Q Consensus 597 A~~~~~~g~~~~~~~~~~~~~~~~~G~G~in~~~Av~~ 634 (781)
|++++ +++..+|+|++|+.+|++.
T Consensus 288 A~~~g--------------~~~~~~G~G~vd~~~A~~~ 311 (327)
T 2x8j_A 288 ATPIG--------------FTAQAEGNGFLTLDLVERI 311 (327)
T ss_dssp EECCS--------------SCHHHHTTCEECTTHHHHH
T ss_pred CccCC--------------CCCCceeeeEECHHHHHHh
Confidence 98763 1346899999999999984
No 17
>3zxy_A Subtilisin-like protein; hydrolase; 1.58A {Prochloron didemni} PDB: 3zxx_A
Probab=100.00 E-value=3.7e-51 Score=433.16 Aligned_cols=266 Identities=23% Similarity=0.251 Sum_probs=211.8
Q ss_pred CCCC-CceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCCccCCC
Q 047013 139 ARFG-EDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSFLVPEN 217 (781)
Q Consensus 139 ~~~G-~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~p~~ 217 (781)
.++| +||+|||||||||++||+|+++ .+..+.+... ..
T Consensus 3 ~l~G~~gV~VaViDtGid~~Hpdl~g~--------------------------~~~~~~~~~~---------------~~ 41 (282)
T 3zxy_A 3 SLKGDHNIRVAILDGPVDIAHPCFQGA--------------------------DLTVLPTLAP---------------TA 41 (282)
T ss_dssp TCCCCTTSEEEEEESCCCTTSGGGTTC--------------------------EEEECCCSSC---------------CC
T ss_pred CCcCCCCCEEEEEcCCCCCCChhHCCC--------------------------eeecCcCCCC---------------CC
Confidence 3578 7999999999999999999864 1111111110 11
Q ss_pred CCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhcCCcEE
Q 047013 218 LTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHDGVDII 297 (781)
Q Consensus 218 ~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~g~dVI 297 (781)
.....|.+||||||||||+|+.. ..+.||||+|+|+.+|++.+... ..+...+++||+||++++++||
T Consensus 42 ~~~d~~~~gHGT~VAGiiag~~~----------~~~~GvAp~a~l~~~kv~~~~~~--~~~~~~i~~ai~~a~~~~~~Vi 109 (282)
T 3zxy_A 42 ARSDGFMSAHGTHVASIIFGQPE----------TSVPGIAPQCRGLIVPIFSDDRR--RITQLDLARGIERAVNAGAHII 109 (282)
T ss_dssp CCTTCHHHHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEEEECSCSSSS--CCCHHHHHHHHHHHHHTTCSEE
T ss_pred CCCCCCCCCcccceeehhhccCC----------ceeeeeccccceEeeEeeccccc--cchHHHHHHHHHHhhccCCeEE
Confidence 12334567999999999999742 23589999999999999865442 3678889999999999999999
Q ss_pred EecCCCCC-CCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCCCccCCCCceEEecccCCceeeeeeEEeCCceEEeeee
Q 047013 298 SASLGSKP-KEHFESSVAVGSFHAMMHGILVVASAGNSGPAEKTVDNVPPWVLTVGASTTDREFSSYVTLGNKMVIKGAS 376 (781)
Q Consensus 298 N~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~d~~~~~~~~~~~~~~~~g~~ 376 (781)
|||||... .......+..++..+.++|+++|+||||+|......+...+++|+|||++.+
T Consensus 110 n~S~G~~~~~~~~~~~~~~ai~~a~~~gi~vV~AaGN~g~~~~~~Pa~~~~vi~Vga~~~~------------------- 170 (282)
T 3zxy_A 110 NISGGELTDFGEADGWLENAVSLCRQNNVLLVAAAGNNGCDCLHVPAALPAVLAVGAMDDH------------------- 170 (282)
T ss_dssp EECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSCSSCEEETTTSTTCEEEEEECTT-------------------
T ss_pred eccCccccccccccHHHHHHHHHHhhcCceEEEecccCCCccccCccccceeEEEEEEcCC-------------------
Confidence 99999763 2233455778888999999999999999998877777788999999984322
Q ss_pred eeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceEEEEecCCCCc
Q 047013 377 IAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVGMILANSREDQ 456 (781)
Q Consensus 377 ~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g~i~~~~~~~~ 456 (781)
T Consensus 171 -------------------------------------------------------------------------------- 170 (282)
T 3zxy_A 171 -------------------------------------------------------------------------------- 170 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccCeeeeCCCcEE
Q 047013 457 NISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPDVIAPGVDII 536 (781)
Q Consensus 457 ~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~ 536 (781)
+.++.||+||+. ..||||+|||++|+
T Consensus 171 -------------------------------------------------~~~~~~S~~~~~-----~~~~di~ApG~~i~ 196 (282)
T 3zxy_A 171 -------------------------------------------------GHPLDFSNWGST-----YEQQGILAPGEDIL 196 (282)
T ss_dssp -------------------------------------------------SCBCSSSCCCHH-----HHHHEEEEECSSEE
T ss_pred -------------------------------------------------CccccccCCCCC-----ccccceeccCccee
Confidence 577889999864 46889999999999
Q ss_pred eeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhC----CCCCHHHHHHHHHhccccCCCCCCcccccCC
Q 047013 537 AAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLH----PDWSPAAIKSAIMTTATTEDSSKHPILDQVT 612 (781)
Q Consensus 537 sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~----p~lt~~~ik~~L~~TA~~~~~~g~~~~~~~~ 612 (781)
++++.+ .|..++|||||||||||++|||+|++ |.++|++||++|++||++++..
T Consensus 197 s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~~~vk~~L~~tA~~~~~~--------- 254 (282)
T 3zxy_A 197 GAKPGG-------------GTERLSGTAFATPIVSGVAALLLSEQVRRGETPDPQKVRQLLLQSALPCDDD--------- 254 (282)
T ss_dssp EECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHCBCC------------
T ss_pred eecCCC-------------ceeecCCCcccchHHHHHHHHHHHHhHhhCCCCCHHHHHHHHHhhCeeCCCC---------
Confidence 998874 89999999999999999999999874 7899999999999999876432
Q ss_pred CCCCCCCcccCCcccccccCC
Q 047013 613 GQKATPFAYGAGHVNPNSALD 633 (781)
Q Consensus 613 ~~~~~~~~~G~G~in~~~Av~ 633 (781)
.+.....+|+|+||+.+|++
T Consensus 255 -~~~~~~~~G~G~ln~~~A~~ 274 (282)
T 3zxy_A 255 -APEQARRCLAGRLNVSGAFT 274 (282)
T ss_dssp -----CGGGTTCBCCHHHHHH
T ss_pred -CCCccCceeeeEeCHHHHHH
Confidence 22345689999999999987
No 18
>2ixt_A 36KDA protease; serine protease, sphericase, subtilisin like protease, hydrolase; 0.8A {Bacillus sphaericus} SCOP: c.41.1.1 PDB: 3d43_A 1ea7_A* 2gko_A*
Probab=100.00 E-value=5.4e-50 Score=430.24 Aligned_cols=281 Identities=27% Similarity=0.320 Sum_probs=223.9
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSF 212 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (781)
..+|..+++|+||+|||||||||++||+|.++ +...++|.....
T Consensus 16 ~~~w~~~~~G~gv~VaViDtGvd~~H~~l~~~--------------------------~~~~~~~~~~~~---------- 59 (310)
T 2ixt_A 16 NDTLTSTTGGSGINIAVLDTGVNTSHPDLVNN--------------------------VEQCKDFTGATT---------- 59 (310)
T ss_dssp CTTCCCCCCCTTCEEEEEESCCCTTCTTTTTT--------------------------EEEEEESSSSSS----------
T ss_pred hhhhhccCCCCCcEEEEEecCCCCCCHHHhhc--------------------------ccccccccCCCC----------
Confidence 47999999999999999999999999999753 344455543210
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhc
Q 047013 213 LVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHD 292 (781)
Q Consensus 213 ~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~ 292 (781)
.......|..||||||||||+|.... ....+.||||+|+|+.+|++++.+ .+..+++++||+|++++
T Consensus 60 ---~~~~~~~d~~gHGT~vAgiia~~~~~-------n~~g~~GvAp~a~l~~~~v~~~~g---~~~~~~~~~ai~~a~~~ 126 (310)
T 2ixt_A 60 ---PINNSCTDRNGHGTHVAGTALADGGS-------DQAGIYGVAPDADLWAYKVLLDSG---SGYSDDIAAAIRHAADQ 126 (310)
T ss_dssp ---CEETCCCCSSSHHHHHHHHHHCBCCT-------TSCSCBCSCTTSEEEEEECSCTTS---CCCHHHHHHHHHHHHHH
T ss_pred ---CCCCCCCCCCCCHHHHHHHHhccCCC-------CCCceEEECCCCEEEEEEEEcCCC---CCcHHHHHHHHHHHHHh
Confidence 00124568899999999999998521 122358999999999999998776 46889999999999999
Q ss_pred CC-----cEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCC--CCccCCCCceEEecccCCceeeeeeEE
Q 047013 293 GV-----DIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAE--KTVDNVPPWVLTVGASTTDREFSSYVT 365 (781)
Q Consensus 293 g~-----dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~--~~~~~~~p~vitVgA~~~d~~~~~~~~ 365 (781)
++ +|||||||... ....+..++.++.++|++||+||||+|... ..++...+++|+|||++...
T Consensus 127 ~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gv~vV~AAGN~g~~~~~~~~Pa~~~~vi~Vga~~~~~------- 196 (310)
T 2ixt_A 127 ATATGTKTIISMSLGSSA---NNSLISSAVNYAYSKGVLIVAAAGNSGYSQGTIGYPGALPNAIAVAALENVQ------- 196 (310)
T ss_dssp HHHHTCCEEEEECCCBSS---CCHHHHHHHHHHHHTTCEEEEECCSCCSSTTCCCBTTTSTTSEEEEEEEEEE-------
T ss_pred hhccCCCeEEEEcCCCCC---CCHHHHHHHHHHHhCCcEEEEcCCCCCCCCCCCCCcccCCCeeEEEeccccc-------
Confidence 88 99999999873 245678888899999999999999999763 44556779999999853210
Q ss_pred eCCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCce
Q 047013 366 LGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAV 445 (781)
Q Consensus 366 ~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~ 445 (781)
T Consensus 197 -------------------------------------------------------------------------------- 196 (310)
T 2ixt_A 197 -------------------------------------------------------------------------------- 196 (310)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCC--ccccccCCCCCCCC---
Q 047013 446 GMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSR--MTSFFSARGPNLID--- 520 (781)
Q Consensus 446 g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~a~fSs~Gp~~~~--- 520 (781)
..+ .++.||++||....
T Consensus 197 ----------------------------------------------------------~~g~~~~~~~S~~G~~~~~g~~ 218 (310)
T 2ixt_A 197 ----------------------------------------------------------QNGTYRVADYSSRGYISTAGDY 218 (310)
T ss_dssp ----------------------------------------------------------ETTEEEECTTSCCCCTTTTTSS
T ss_pred ----------------------------------------------------------cCCCeeeccccCCCCccCCccc
Confidence 012 67889999995421
Q ss_pred -CCCccCeeeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcccc
Q 047013 521 -PAILKPDVIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTATT 599 (781)
Q Consensus 521 -~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~~ 599 (781)
..+.||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++++||++|++||++
T Consensus 219 ~~~~~~~di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~ 285 (310)
T 2ixt_A 219 VIQEGDIEISAPGSSVYSTWYNG-------------GYNTISGTSMATPHVSGLAAKIWAENPSLSNTQLRSNLQERAKS 285 (310)
T ss_dssp SCCTTCCCEEEECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHHHHT
T ss_pred cccCCCeeEECCCCCEeeecCCC-------------CEEeeccHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHhhCcc
Confidence 1235999999999999998764 79999999999999999999999999999999999999999998
Q ss_pred CCCCCCcccccCCCCCCCCCcccCCcccc
Q 047013 600 EDSSKHPILDQVTGQKATPFAYGAGHVNP 628 (781)
Q Consensus 600 ~~~~g~~~~~~~~~~~~~~~~~G~G~in~ 628 (781)
++..+. ......++..+|||++|+
T Consensus 286 ~~~~~~-----~~a~~g~d~~~G~G~~~v 309 (310)
T 2ixt_A 286 VDIKGG-----YGAAIGDDYASGFGFARV 309 (310)
T ss_dssp SCCCBS-----TTCCSSSBTTTBTCBCCC
T ss_pred cCCCCC-----cccccCCccccccceeec
Confidence 764321 222455678999999986
No 19
>2z30_A TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 3a3o_A 3a3n_A 2zrq_A 2z57_A 2z56_A 2z58_A 3a3p_A 2z2x_A* 2z2y_A
Probab=100.00 E-value=2.6e-50 Score=433.92 Aligned_cols=265 Identities=28% Similarity=0.412 Sum_probs=219.4
Q ss_pred ccccccCCCCC--ceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCC
Q 047013 133 DSAWNKARFGE--DVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNS 210 (781)
Q Consensus 133 ~~~w~~~~~G~--gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 210 (781)
..+|..+ +|+ ||+|||||||||++||+|.++ +...++|..+...
T Consensus 18 ~~aw~~~-~G~~~gv~VaViDtGid~~Hp~l~~~--------------------------~~~~~~~~~~~~~------- 63 (320)
T 2z30_A 18 PSVWSIT-DGSVSVIQVAVLDTGVDYDHPDLAAN--------------------------IAWCVSTLRGKVS------- 63 (320)
T ss_dssp GGGTTTC-CSCCTTCEEEEEESCBCTTCTTTGGG--------------------------EEEEEECGGGCCB-------
T ss_pred HHHHHhc-CCCcCCeEEEEECCCCCCCChhHhcc--------------------------cccCccccCCccC-------
Confidence 4899988 999 999999999999999999753 3344444432100
Q ss_pred CCccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhh
Q 047013 211 SFLVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAI 290 (781)
Q Consensus 211 ~~~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~ 290 (781)
.+.....|..||||||||||+|.. + ...+.||||+|+|+.+|+++..+ .++.+++++||+||+
T Consensus 64 -----~~~~~~~d~~gHGT~vAgiia~~~-n--------~~g~~GvAp~a~l~~~~v~~~~g---~~~~~~i~~ai~~a~ 126 (320)
T 2z30_A 64 -----TKLRDCADQNGHGTHVIGTIAALN-N--------DIGVVGVAPGVQIYSVRVLDARG---SGSYSDIAIGIEQAI 126 (320)
T ss_dssp -----CCHHHHBCSSSHHHHHHHHHHCCS-S--------SBSCCCSSTTCEEEEEECSCTTS---EEEHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCCCCHHHHHHHHHccc-C--------CCceEeeCCCCEEEEEEeeCCCC---CccHHHHHHHHHHHH
Confidence 001124678999999999999973 1 12348999999999999998766 477899999999999
Q ss_pred hc--------------------CCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCCCccCCCCceEE
Q 047013 291 HD--------------------GVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAEKTVDNVPPWVLT 350 (781)
Q Consensus 291 ~~--------------------g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vit 350 (781)
++ +++|||||||... ....+..++.++.++|++||+||||+|.....++...|++|+
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~Vin~S~G~~~---~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~Pa~~~~vi~ 203 (320)
T 2z30_A 127 LGPDGVADKDGDGIIAGDPDDDAAEVISMSLGGPA---DDSYLYDMIIQAYNAGIVIVAASGNEGAPSPSYPAAYPEVIA 203 (320)
T ss_dssp HTTTTCSCTTSSSCCTTCTTSCCCSEEEECEEBSC---CCHHHHHHHHHHHHTTCEEEEECCSSCCSSCCBTTTSTTEEE
T ss_pred hCcccccccccccccccccccCCceEEEecCCCCC---CCHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCcccCCCeEE
Confidence 87 9999999999873 245677888889999999999999999877777788899999
Q ss_pred ecccCCceeeeeeEEeCCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCC
Q 047013 351 VGASTTDREFSSYVTLGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAK 430 (781)
Q Consensus 351 VgA~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~ 430 (781)
|||++.+
T Consensus 204 Vga~~~~------------------------------------------------------------------------- 210 (320)
T 2z30_A 204 VGAIDSN------------------------------------------------------------------------- 210 (320)
T ss_dssp EEEECTT-------------------------------------------------------------------------
T ss_pred EEeeCCC-------------------------------------------------------------------------
Confidence 9985422
Q ss_pred cchHHHHHHHhcCceEEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCcccc
Q 047013 431 IGDAKGQRAAQAGAVGMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSF 510 (781)
Q Consensus 431 ~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~ 510 (781)
+.++.
T Consensus 211 ---------------------------------------------------------------------------~~~~~ 215 (320)
T 2z30_A 211 ---------------------------------------------------------------------------DNIAS 215 (320)
T ss_dssp ---------------------------------------------------------------------------SCBCT
T ss_pred ---------------------------------------------------------------------------CCcCc
Confidence 57889
Q ss_pred ccCCCCCCCCCCCccCeeeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhC---------
Q 047013 511 FSARGPNLIDPAILKPDVIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLH--------- 581 (781)
Q Consensus 511 fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~--------- 581 (781)
||++|| +|+|||++|+++++.+ .|..++|||||||||||++|||+|++
T Consensus 216 ~S~~g~----------~v~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~~ 272 (320)
T 2z30_A 216 FSNRQP----------EVSAPGVDILSTYPDD-------------SYETLMGTAMATPHVSGVVALIQAAYYQKYGKILP 272 (320)
T ss_dssp TSCSSC----------SEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred ccCCCC----------CEEeCCCCeEEeccCC-------------CeEeccCHHHHHHHHHHHHHHHHHhchhhcccccc
Confidence 999997 7899999999998764 89999999999999999999999999
Q ss_pred ----CCCCHHHHHHHHHhccccCCCCCCcccccCCCCCCCCCcccCCcccccccCCC
Q 047013 582 ----PDWSPAAIKSAIMTTATTEDSSKHPILDQVTGQKATPFAYGAGHVNPNSALDP 634 (781)
Q Consensus 582 ----p~lt~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~in~~~Av~~ 634 (781)
|.|++.+||++|++||+++...| ....||||+||+.+|++.
T Consensus 273 ~~~~p~lt~~~v~~~L~~ta~~~~~~g------------~~~~~G~G~vd~~~A~~~ 317 (320)
T 2z30_A 273 VGTFDDISKNTVRGILHITADDLGPTG------------WDADYGYGVVRAALAVQA 317 (320)
T ss_dssp CCCTTCCSTTSHHHHHHHHSBCCSSSS------------SBTTTBTCBCCHHHHHHH
T ss_pred cccCCCCCHHHHHHHHHhhCccCCCCC------------CCCCcCCceeCHHHHHHH
Confidence 99999999999999999874322 346799999999999874
No 20
>4h6w_A N-terminal cyanobactin protease; hydrolase; 2.45A {Planktothrix agardhii nies-596}
Probab=100.00 E-value=3.1e-50 Score=431.68 Aligned_cols=273 Identities=25% Similarity=0.307 Sum_probs=219.3
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSF 212 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (781)
+++|+....++||+|||||||||++||+|.++ .+.+..++..+
T Consensus 11 ~~aW~~~~G~~gV~VaViDtGid~~Hpdl~g~-------------------------~~~~~~~~~~~------------ 53 (306)
T 4h6w_A 11 KKLWSETRGDPKICVAVLDGIVDQNHPCFIGA-------------------------DLTRLPSLVSG------------ 53 (306)
T ss_dssp HHHHHHCSCCTTCEEEEESSCCCTTSGGGTTC-------------------------EEEECC-----------------
T ss_pred HHHHhhhCCCCCCEEEEEcCCCCCCChhHcCC-------------------------cccCCCcccCC------------
Confidence 48999987779999999999999999999764 12222222221
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhc
Q 047013 213 LVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHD 292 (781)
Q Consensus 213 ~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~ 292 (781)
+.....|.+||||||||||+|+.. +.+.||||+|+|+.+|++.+.+. .+....+++||+||+++
T Consensus 54 ----~~~~~~d~~gHGThVAGiiag~~~----------~~~~GVAp~a~l~~~kv~~~~~~--~~~~~~i~~ai~~a~~~ 117 (306)
T 4h6w_A 54 ----EANANGSMSTHGTHVASIIFGQHD----------SPVTGIAPQCRGLIVPVFADESL--KLSQLDLSRAIEQAVNN 117 (306)
T ss_dssp ---------CCCCHHHHHHHHHHHCCTT----------SSSCCSSTTSEEEECCCCCSSSC--CCCHHHHHHHHHHHHHT
T ss_pred ----CCCCCCCCCCchHHHHHHHHcccc----------CCcceeccccccceeeccccccc--cchHHHHHHHHHHhhcc
Confidence 011345778999999999999742 23589999999999999865432 46788899999999999
Q ss_pred CCcEEEecCCCCC-CCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCCCccCCCCceEEecccCCceeeeeeEEeCCceE
Q 047013 293 GVDIISASLGSKP-KEHFESSVAVGSFHAMMHGILVVASAGNSGPAEKTVDNVPPWVLTVGASTTDREFSSYVTLGNKMV 371 (781)
Q Consensus 293 g~dVIN~SlG~~~-~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~d~~~~~~~~~~~~~~ 371 (781)
+++|||+|||... .......+..++..+.++|+++|+||||+|.....++...+++|+|||++.+
T Consensus 118 g~~vi~~s~g~~~~~~~~~~~~~~ai~~a~~~gi~vvaaagn~g~~~~~~Pa~~~~vi~Vga~~~~-------------- 183 (306)
T 4h6w_A 118 GANIINVSAGQLTDAGEADTWLEKAIQLCQENNVLLIAATGNDGCECLHVPASLPTVLAVGAMDDQ-------------- 183 (306)
T ss_dssp TCSEEEECCCEEESSSCCCHHHHHHHHHHHHTTCEEEEECCSSSSBCEEETTTSTTCEEEEEECTT--------------
T ss_pred cceeeeccccccccCCCccHHHHHHHHHHHHcCCeEEEecCCCCcccccccccCCcceEEEEecCC--------------
Confidence 9999999999752 2234455788888999999999999999998777777788999999985432
Q ss_pred EeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceEEEEec
Q 047013 372 IKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVGMILAN 451 (781)
Q Consensus 372 ~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g~i~~~ 451 (781)
T Consensus 184 -------------------------------------------------------------------------------- 183 (306)
T 4h6w_A 184 -------------------------------------------------------------------------------- 183 (306)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccCeeeeC
Q 047013 452 SREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPDVIAP 531 (781)
Q Consensus 452 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~AP 531 (781)
+.+++||++|+. ..||||+||
T Consensus 184 ------------------------------------------------------~~~~~~s~~g~~-----~~~~di~AP 204 (306)
T 4h6w_A 184 ------------------------------------------------------GKPVDFSNWGDA-----YQKQGILAP 204 (306)
T ss_dssp ------------------------------------------------------SCBCSSSCBCHH-----HHHHEEEEE
T ss_pred ------------------------------------------------------CCccccccccCC-----cCcceeecC
Confidence 467889999954 468899999
Q ss_pred CCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHh----CCCCCHHHHHHHHHhccccCCCCCCcc
Q 047013 532 GVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTL----HPDWSPAAIKSAIMTTATTEDSSKHPI 607 (781)
Q Consensus 532 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~----~p~lt~~~ik~~L~~TA~~~~~~g~~~ 607 (781)
|++|+++++.+ .|..++|||||||||||++|||+++ +|.|+|++||++|++||++++..+
T Consensus 205 G~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~~All~s~~~~~~p~~t~~~v~~~L~~tA~~~~~~~--- 268 (306)
T 4h6w_A 205 GKDILGAKPNG-------------GTIRLSGTSFATPIVSGVAALLLSLQIKRGEKPDPQKVKNALLASATPCNPKD--- 268 (306)
T ss_dssp CSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHTCBCCCTTT---
T ss_pred CcCcccccCCC-------------ceeccCCCcchhHHHHHHHHHHHHHHHhhCCCCCHHHHHHHHHhhCccCCCCC---
Confidence 99999998864 8999999999999999999999865 699999999999999999875432
Q ss_pred cccCCCCCCCCCcccCCcccccccCCC
Q 047013 608 LDQVTGQKATPFAYGAGHVNPNSALDP 634 (781)
Q Consensus 608 ~~~~~~~~~~~~~~G~G~in~~~Av~~ 634 (781)
..+...||+|+||+.+|++.
T Consensus 269 -------~~~~~~~G~G~ln~~~Av~~ 288 (306)
T 4h6w_A 269 -------TDDQSRCLMGKLNILDAIEH 288 (306)
T ss_dssp -------CSCGGGGTTCBCCHHHHHHH
T ss_pred -------CCCCCCcceeecCHHHHHHH
Confidence 22345799999999999983
No 21
>2iy9_A SUBA; toxin, shiga, plasmid; 1.8A {Escherichia coli}
Probab=100.00 E-value=6.5e-50 Score=436.37 Aligned_cols=270 Identities=21% Similarity=0.158 Sum_probs=216.9
Q ss_pred ccccccCCCCC--ceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCC
Q 047013 133 DSAWNKARFGE--DVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNS 210 (781)
Q Consensus 133 ~~~w~~~~~G~--gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~ 210 (781)
..+|+. .+|+ ||+||||||||| +||+|.++ +...++|.++-
T Consensus 33 ~~aw~~-~~G~~~gv~VaViDsGid-~Hp~l~~~--------------------------~~~~~~~~~~~--------- 75 (347)
T 2iy9_A 33 TETTMS-LTDKNTPVVVSVVDSGVA-FIGGLSDS--------------------------EFAKFSFTQDG--------- 75 (347)
T ss_dssp CHHHHH-TSCTTSCCEEEEEESCCC-CCGGGTTC--------------------------EEEEEECBTTC---------
T ss_pred HHHHHH-hcCCCCCCEEEEEcCCCc-CChhhhcC--------------------------cccCCcccCCC---------
Confidence 478988 8999 999999999999 99999753 44444554320
Q ss_pred CCccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhh
Q 047013 211 SFLVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAI 290 (781)
Q Consensus 211 ~~~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~ 290 (781)
.|.......|..||||||||||+|. .| +.||||+|+|+.+|++++.+ . .++++||+||+
T Consensus 76 ---~~~~~~~~~d~~gHGT~vAgiia~~-------~g-----~~GvAp~a~l~~~~v~~~~~----~--~~~~~ai~~a~ 134 (347)
T 2iy9_A 76 ---SPFPVKKSEALYIHGTAMASLIASR-------YG-----IYGVYPHALISSRRVIPDGV----Q--DSWIRAIESIM 134 (347)
T ss_dssp ---CSSCCSSSHHHHHHHHHHHHHHHCS-------SS-----SCCSSTTCEEEEEECCSSBC----T--THHHHHHHHHH
T ss_pred ---CCCCCCCCCCCCCcHHHHHHHHhcc-------cC-----CcccCCCCEEEEEEEecCCC----H--HHHHHHHHHHH
Confidence 0011224567899999999999997 22 38999999999999997654 2 29999999999
Q ss_pred hc------CCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCC-------CCCccCCCC----------c
Q 047013 291 HD------GVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPA-------EKTVDNVPP----------W 347 (781)
Q Consensus 291 ~~------g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~-------~~~~~~~~p----------~ 347 (781)
++ |++|||||||..........+..++..+.++|++||+||||+|.. ...++...+ +
T Consensus 135 ~~~~~~~~~~~Vin~S~G~~~~~~~~~~~~~ai~~a~~~gilvV~AAGN~g~~~~~~~~~~~~~Pa~~~~~~~~~~~~~~ 214 (347)
T 2iy9_A 135 SNVFLAPGEEKIINISGGQKGVASASVWTELLSRMGRNNDRLIVAAVGNDGADIRKLSAQQRIWPAAYHPVSSVNKKQDP 214 (347)
T ss_dssp TCTTSCTTEEEEEEESSCBCCC-CCHHHHHHHHHHHHHTSCEEEEECCBSCCBTTTSCTTTSCBTTTCCCCSHHHHHTCC
T ss_pred hhhhcccCCceEEEeccccCCCCCcCHHHHHHHHHHHhCCeEEEEeCCCCCCCCCCcccccccCCCcCccccccccccCC
Confidence 99 999999999976433455678888899999999999999999975 334555667 9
Q ss_pred eEEecccCC--ceeeeeeEEeCCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEE
Q 047013 348 VLTVGASTT--DREFSSYVTLGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILI 425 (781)
Q Consensus 348 vitVgA~~~--d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl 425 (781)
+|+|||++. +...
T Consensus 215 vi~Vga~~~~~~g~~----------------------------------------------------------------- 229 (347)
T 2iy9_A 215 VIRVAALAQYRKGET----------------------------------------------------------------- 229 (347)
T ss_dssp EEEEEEECCCCTTSC-----------------------------------------------------------------
T ss_pred EEEEEEcccCCCCce-----------------------------------------------------------------
Confidence 999998654 2100
Q ss_pred EecCCcchHHHHHHHhcCceEEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccC
Q 047013 426 CYDAKIGDAKGQRAAQAGAVGMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWS 505 (781)
Q Consensus 426 ~~~g~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~ 505 (781)
....
T Consensus 230 ----------------------------------------------------------------------------~~~~ 233 (347)
T 2iy9_A 230 ----------------------------------------------------------------------------PVLH 233 (347)
T ss_dssp ----------------------------------------------------------------------------CCBC
T ss_pred ----------------------------------------------------------------------------eccc
Confidence 0001
Q ss_pred CccccccCCCCCCCCCCCccCeeeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCC
Q 047013 506 RMTSFFSARGPNLIDPAILKPDVIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWS 585 (781)
Q Consensus 506 ~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt 585 (781)
+.++.||++||+ ||||+|||++|+++++.+ .|..++|||||||||||++|||+|++|+|+
T Consensus 234 ~~~~~fS~~G~~-------~~di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~~p~lt 293 (347)
T 2iy9_A 234 GGGITGSRFGNN-------WVDIAAPGQNITFLRPDA-------------KTGTGSGTSEATAIVSGVLAAMTSCNPRAT 293 (347)
T ss_dssp CCSSSCBCBCTT-------TCSEEEECSSEEEECTTS-------------CEEEECSHHHHHHHHHHHHHHHHHHCTTSC
T ss_pred CCCCCCCCCCCC-------CCEEEeCCCCeEeecCCC-------------CeEeccchHHHHHHHHHHHHHHHHhCCCCC
Confidence 356799999984 569999999999999864 899999999999999999999999999999
Q ss_pred HHHHHHHHHhccccCCCCCCcccccCCCCCCCCCcccCCcccccccCCC
Q 047013 586 PAAIKSAIMTTATTEDSSKHPILDQVTGQKATPFAYGAGHVNPNSALDP 634 (781)
Q Consensus 586 ~~~ik~~L~~TA~~~~~~g~~~~~~~~~~~~~~~~~G~G~in~~~Av~~ 634 (781)
+.+||++|++||+++... ....+|+|+||+.+|++.
T Consensus 294 ~~~v~~~L~~tA~~~~~~-------------~~~~~G~G~ld~~~A~~~ 329 (347)
T 2iy9_A 294 ATELKRTLLESADKYPSL-------------VDKVTEGRVLNAEKAISM 329 (347)
T ss_dssp HHHHHHHHHHHSEECGGG-------------TTTSGGGEECCHHHHHHH
T ss_pred HHHHHHHHHHhCccCCCC-------------CCccccCCEecHHHHHHH
Confidence 999999999999987432 125899999999999985
No 22
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=100.00 E-value=1.8e-48 Score=467.18 Aligned_cols=357 Identities=22% Similarity=0.230 Sum_probs=247.6
Q ss_pred CCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhh-----cCCcE
Q 047013 222 IDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIH-----DGVDI 296 (781)
Q Consensus 222 ~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~-----~g~dV 296 (781)
.|++||||||||||||.. ++ ..+.||||+|+|+.+|+++.... ..++...++.+|.+|++ .|++|
T Consensus 267 ~D~~GHGThVAGIIAa~~-N~--------~g~~GVAP~AkI~~vKVld~~~g-~~~t~s~l~~AI~~Aid~a~~~~gadV 336 (1354)
T 3lxu_X 267 GMSSPHGTHVSSIASGNH-SS--------RDVDGVAPNAKIVSMTIGDGRLG-SMETGTALVRAMTKVMELCRDGRRIDV 336 (1354)
T ss_dssp ECCCHHHHHHHHHHCCCC-SS--------SSSCCSCTTCEEEEEECBCTTTS-SCBCHHHHHHHHHHHHHHHHTTCCCCE
T ss_pred CCCCCcHHHHHHHHhcCC-CC--------CCceeecCCCEEEEEEeccCCCC-cccChHHHHHHHHHHHHHHhhcCCceE
Confidence 578999999999999986 22 23589999999999999876541 12356778888888877 79999
Q ss_pred EEecCCCCCCCCCCChHHHHHHHHH-hCCCEEEEecCCCCCCCCCc--cCC--CCceEEecccCCceeeeeeEEeCCceE
Q 047013 297 ISASLGSKPKEHFESSVAVGSFHAM-MHGILVVASAGNSGPAEKTV--DNV--PPWVLTVGASTTDREFSSYVTLGNKMV 371 (781)
Q Consensus 297 IN~SlG~~~~~~~~~~~~~a~~~a~-~~Gi~vV~AAGN~g~~~~~~--~~~--~p~vitVgA~~~d~~~~~~~~~~~~~~ 371 (781)
||||||........+.+..++.++. ++|++||+||||+|....+. ++. .+++|+|||++.+......
T Consensus 337 INmS~G~~~~~~~~~~l~~aI~~A~~~~GVlVVaAAGN~G~~~~ti~~PA~~ss~~VItVGAtd~~~~~~a~-------- 408 (1354)
T 3lxu_X 337 INMSYGEHANWSNSGRIGELMNEVVNKYGVVWVASAGNHGPALCTVGTPPDISQPSLIGVGAYVSPQMMEAE-------- 408 (1354)
T ss_dssp EEECCCCCCSCSSCCHHHHHHHHHHHTSCCEEEEECCSCCSSSSCCCTTTCSSSSCEEEEEEECCTTCCCC---------
T ss_pred EEcCCccCCCCCccHHHHHHHHHHHHhCCcEEEEeCCCCCCCCCccCCcccccCCceEEEEeecCCCCcccc--------
Confidence 9999999854344567788888886 89999999999999765443 333 7999999997543210000
Q ss_pred EeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceEEEEec
Q 047013 372 IKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVGMILAN 451 (781)
Q Consensus 372 ~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g~i~~~ 451 (781)
|.
T Consensus 409 --------------------ys---------------------------------------------------------- 410 (1354)
T 3lxu_X 409 --------------------YA---------------------------------------------------------- 410 (1354)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------cc----------------------------------------------------------
Confidence 00
Q ss_pred CCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccCeeeeC
Q 047013 452 SREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPDVIAP 531 (781)
Q Consensus 452 ~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~AP 531 (781)
......+.+++|||+||+. ++++||||+||
T Consensus 411 ------------------------------------------------~~~~~~g~~asFSS~GPt~--dg~~KpDIaAP 440 (1354)
T 3lxu_X 411 ------------------------------------------------MREKLPGNVYTWTSRDPCI--DGGQGVTVCAP 440 (1354)
T ss_dssp -------------------------------------------------------CCCCCCCCSCCS--SSSCCEEEEEE
T ss_pred ------------------------------------------------cccCCCCccccccCCCCCc--cCCCcceEEec
Confidence 0000126889999999998 89999999999
Q ss_pred CCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHH----hCCCCCHHHHHHHHHhccccCCCCCCcc
Q 047013 532 GVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKT----LHPDWSPAAIKSAIMTTATTEDSSKHPI 607 (781)
Q Consensus 532 G~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q----~~p~lt~~~ik~~L~~TA~~~~~~g~~~ 607 (781)
|++|+++..... +.|..++|||||||||||++|||++ .+|.|++.+||++|++||++++.
T Consensus 441 G~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAGvAALLLSalkq~~P~LTp~qVk~lL~~TA~~~~~----- 504 (1354)
T 3lxu_X 441 GGAIASVPQFTM-----------SKSQLMNGTSMAAPHVAGAVALLISGLKQQNIEYSPYSIKRAISVTATKLGY----- 504 (1354)
T ss_dssp C--------------------------CCCCGGGCHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSBCCTT-----
T ss_pred CceEEEeecCCC-----------CceecCCCCCHHHHHHHHHHHHHHHhhHhhCCCCCHHHHHHHHHHhCccCCC-----
Confidence 999999865422 2789999999999999999999986 79999999999999999988642
Q ss_pred cccCCCCCCCCCcccCCcccccccCCCCeeecCCCcccccccccCCCccc-ceecccCCCCCCCCCCCCCCCCCCCCeEE
Q 047013 608 LDQVTGQKATPFAYGAGHVNPNSALDPGLVYDLGPGDYLAYLCGLGYNQS-IIDLFTQPKEPFKCPGPFSIADFNYPSIA 686 (781)
Q Consensus 608 ~~~~~~~~~~~~~~G~G~in~~~Av~~~l~~~~~~~~~~~~~~~~g~~~~-~~~~~~~~~~~~~~~~~~~~~~ln~ps~~ 686 (781)
.+++.||+|+||+.+|++..+.|+..+.+++.|.|..+.... .|.+-.. .
T Consensus 505 --------~~~~~~G~GlLDa~~AV~~a~~~~~~p~~~v~f~~~v~~~~~rgIylR~~-----~---------------- 555 (1354)
T 3lxu_X 505 --------VDPFAQGHGLLNVEKAFEHLTEHRQSKDNMLRFSVRVGNNADKGIHLRQG-----V---------------- 555 (1354)
T ss_dssp --------SCTTTSSSSBCCHHHHHHHHHTTTTCGGGGEEEEEEETTTTBSSEEECSS-----C----------------
T ss_pred --------CCcccccCCEeCHHHHHHHHHhcCCCCccceEEEEEecCCCCCceEEecc-----c----------------
Confidence 245689999999999999999999999999999999885322 2221100 0
Q ss_pred EecCCCCcEEEEEEE----EecC---C-CCeeE--EEEEecCCceEEEEeecEEEEcCCCcEEEEEEEEEeecCCCCCCC
Q 047013 687 VPNLVNGSMTVSRRL----KNVG---T-PTCTY--KAQITEIVGVSAVVEPITLNFTKYGEELTFKITFSVKGNDKPVAT 756 (781)
Q Consensus 687 ~~~~~~~~~~~~~tv----~n~~---~-~~~~y--~~~~~~~~~~~v~~~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~ 756 (781)
. ....+++++| .|.. . ....| ++.+.... .+-..|..+.+ .++.++|.|++++ ... ..
T Consensus 556 ---~-~~~~~~tv~V~p~f~~~~~~~~~~~i~f~~~l~L~~t~--~wv~~p~~l~l--~~~~r~~~v~vDp---~~L-~~ 623 (1354)
T 3lxu_X 556 ---Q-RNSIDYNVYIEPIFYNDKEADPKDKFNFNVRLNLIASQ--PWVQCGAFLDL--SYGTRSIAVRVDP---TGL-QP 623 (1354)
T ss_dssp ---C-CSCEEEEEEEEEEESSCSCSSSTTCSCCCCEEEEEESS--TTEEECSCEEC--TTSCEEEEEEECG---GGC-CS
T ss_pred ---c-CCceEEEEEEeeeecCcccCChhhccceEEEEEEecCC--Cceecccceee--cCCCceEEEEECC---CCC-CC
Confidence 0 1234444443 2211 1 11112 22222221 12223777766 5777889999998 233 55
Q ss_pred ceEEEEEEEEc-----CcceEEEEEEEEeC
Q 047013 757 DYVFGELVWSD-----GFHNVKSTIAVKLQ 781 (781)
Q Consensus 757 ~~~~G~i~~~~-----~~~~v~~P~~~~~~ 781 (781)
+.+++.|..-| .+...|||+-|..|
T Consensus 624 G~h~~~v~~~D~~~~~~gp~f~ipvTv~~P 653 (1354)
T 3lxu_X 624 GVHSAVIRAYDTDCVQKGSLFEIPVTVVQP 653 (1354)
T ss_dssp EEEEEEEEEEESSCTTSCCSEEEEEEEEEC
T ss_pred cceeEEEEEEEcCCcccCceEEeeEEEEee
Confidence 67899998765 26899999998765
No 23
>3lpc_A APRB2; protease, subtilase, virulence factor, hydrolase; 1.70A {Dichelobacter nodosus} PDB: 3lpa_A 3lpd_A 3ti9_A 3ti7_A
Probab=100.00 E-value=3.2e-49 Score=430.00 Aligned_cols=301 Identities=24% Similarity=0.324 Sum_probs=221.3
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCC-CCccccCceeeeeEeccchhhhhhccCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDT-NKAITCNRKLIGIRYISEGLIESCRAMNSS 211 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~-~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 211 (781)
..+|+.+++|+||+||||||||+ +||+|.++-. ..|+-...... .+.......-.....+.+.+...
T Consensus 22 ~~aw~~g~~G~gV~VaViDtGi~-~hp~l~~~~~----~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~------- 89 (340)
T 3lpc_A 22 DKVWDMGFTGQNVVVAVVDTGIL-HHRDLNANVL----PGYDFISNSQISLDGDGRDADPFDEGDWFDNWACG------- 89 (340)
T ss_dssp HHHHHHTCSCTTCEEEEEESCBC-CCTTTGGGBC----CCEECCCCHHHHCSSSSSBSCCBCCCCCBCTTTTS-------
T ss_pred HHHHHhcCCCCCeEEEEEcCCCC-CChhhhcccc----cCccccCCccccccCCCccCCcccccccccccccc-------
Confidence 58999999999999999999998 9999986411 11110000000 00000000000000000000000
Q ss_pred CccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhh
Q 047013 212 FLVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIH 291 (781)
Q Consensus 212 ~~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~ 291 (781)
..|.+.....|..||||||||||+|...++. .+.||||+|+|+.+|+++..+ +..++++++|+|+++
T Consensus 90 -~~~~~~~~~~d~~gHGT~vAgiia~~~~~~~--------g~~GvAp~a~l~~~~v~~~~~----~~~~~~~~ai~~a~~ 156 (340)
T 3lpc_A 90 -GRPDPRKERSDSSWHGSHVAGTIAAVTNNRI--------GVAGVAYGAKVVPVRALGRCG----GYDSDISDGLYWAAG 156 (340)
T ss_dssp -CTTCGGGSCBCCCCHHHHHHHHHHCCCSSSS--------SCCCTTTTSEEEEEECCBTTB----CCHHHHHHHHHHHHT
T ss_pred -CCCCcccCCCCCCCCHHHHHHHHHccCCCCC--------cceeecCCCEEEEEEEecCCC----CcHHHHHHHHHHHhc
Confidence 0122233567889999999999999864332 248999999999999998765 778999999999997
Q ss_pred ----------cCCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCC-CccCCCCceEEecccCCceee
Q 047013 292 ----------DGVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAEK-TVDNVPPWVLTVGASTTDREF 360 (781)
Q Consensus 292 ----------~g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~d~~~ 360 (781)
.+++|||||||... .....+..++.++.++|++||+||||+|.... .++...+++|+|||++.+
T Consensus 157 ~~~~~~~~~~~~~~Vin~S~G~~~--~~~~~~~~~~~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--- 231 (340)
T 3lpc_A 157 GRIAGIPENRNPAKVINMSLGSDG--QCSYNAQTMIDRATRLGALVVVAAGNENQNASNTWPTSCNNVLSVGATTSR--- 231 (340)
T ss_dssp CCCTTSCCCSSCCSEEEECCCEES--CCCHHHHHHHHHHHHHTCEEEEECCSSSSBGGGEETTTSSSCEEEEEECTT---
T ss_pred ccccccccccCCCeEEEeCcCCCC--CcchhHHHHHHHHHhCCcEEEEeCCCCCCCCCCcCCccCCceEEEecCCCC---
Confidence 89999999999762 23445777888899999999999999997643 345677999999985422
Q ss_pred eeeEEeCCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHH
Q 047013 361 SSYVTLGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAA 440 (781)
Q Consensus 361 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~ 440 (781)
T Consensus 232 -------------------------------------------------------------------------------- 231 (340)
T 3lpc_A 232 -------------------------------------------------------------------------------- 231 (340)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hcCceEEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCC
Q 047013 441 QAGAVGMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLID 520 (781)
Q Consensus 441 ~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~ 520 (781)
+.++.||++||.+
T Consensus 232 -----------------------------------------------------------------~~~~~~S~~g~~~-- 244 (340)
T 3lpc_A 232 -----------------------------------------------------------------GIRASFSNYGVDV-- 244 (340)
T ss_dssp -----------------------------------------------------------------SSBCTTCCBSTTC--
T ss_pred -----------------------------------------------------------------CCcCCCCCCCCCc--
Confidence 5788999999854
Q ss_pred CCCccCeeeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHh-C---CCCCHHHHHHHHHhc
Q 047013 521 PAILKPDVIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTL-H---PDWSPAAIKSAIMTT 596 (781)
Q Consensus 521 ~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~-~---p~lt~~~ik~~L~~T 596 (781)
||+|||++|+++++.+... .....|..++|||||||||||++|||+|+ + |.|++++||++|++|
T Consensus 245 ------di~ApG~~i~s~~~~~~~~------~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~p~lt~~~v~~~L~~t 312 (340)
T 3lpc_A 245 ------DLAAPGQDILSTVDSGTRR------PVSDAYSFMAGTSMATPHVSGVAALVISAANSVNKNLTPAELKDVLVST 312 (340)
T ss_dssp ------CEEEECSSEEEEEESCSSS------CCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHT
T ss_pred ------eEEecCCCeecccCCCCcC------CCCCcceecccHhHHHHHHHHHHHHHHHhhhhhCCCCCHHHHHHHHHhc
Confidence 9999999999998865321 11236999999999999999999999998 5 999999999999999
Q ss_pred cccCCCCCCcccccCCCCCCCCCcccCCcccccccCCCC
Q 047013 597 ATTEDSSKHPILDQVTGQKATPFAYGAGHVNPNSALDPG 635 (781)
Q Consensus 597 A~~~~~~g~~~~~~~~~~~~~~~~~G~G~in~~~Av~~~ 635 (781)
|+++.. .+...+|+|+||+.+|++..
T Consensus 313 A~~~~~-------------~~~~~~G~G~vd~~~Av~~~ 338 (340)
T 3lpc_A 313 TSPFNG-------------RLDRALGSGIVDAEAAVNSV 338 (340)
T ss_dssp CBCCSS-------------CCSSCCCSSBCCHHHHHHHH
T ss_pred CCcCCC-------------CCCCCcccceecHHHHHHHH
Confidence 987631 23468999999999998753
No 24
>1sh7_A Extracellular subtilisin-like serine proteinase; cold adaptation, psychrotrophic, subtilisin-like proteinase, depentent, hydrolase; HET: PMS; 1.84A {Vibrio SP} PDB: 1s2n_A*
Probab=100.00 E-value=4.3e-48 Score=408.43 Aligned_cols=235 Identities=29% Similarity=0.384 Sum_probs=202.2
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSF 212 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (781)
..+|..+++|+||+|||||||||++||+|.++ +...++|.++
T Consensus 19 ~~aw~~~~~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~~------------ 60 (284)
T 1sh7_A 19 DRNYNANFDGFGVTAYVIDTGVNNNHEEFGGR--------------------------SVSGYDFVDN------------ 60 (284)
T ss_dssp CSBCCCSCCCTTCEEEEEESCCCTTCTTTTTC--------------------------EEEEEETTTT------------
T ss_pred hhhhhcCCCCCCCEEEEEcCCCCCCChhHcCC--------------------------ccccccccCC------------
Confidence 57999999999999999999999999999753 3334445432
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhc
Q 047013 213 LVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHD 292 (781)
Q Consensus 213 ~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~ 292 (781)
...+.|..||||||||||+|.. .||||+|+|+.+|+++..+ .++.+++++||+|++++
T Consensus 61 -----~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~l~~~kv~~~~g---~~~~~~~~~ai~~a~~~ 118 (284)
T 1sh7_A 61 -----DADSSDCNGHGTHVAGTIGGSQ--------------YGVAKNVNIVGVRVLSCSG---SGTTSGVISGVDWVAQN 118 (284)
T ss_dssp -----BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECBCTTS---CBCHHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCcHHHHHHHHhccc--------------CCcCCCCEEEEEEeeCCCC---CcCHHHHHHHHHHHHhC
Confidence 1245688999999999999873 6999999999999998776 47889999999999974
Q ss_pred --CCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCC-CccCCCCceEEecccCCceeeeeeEEeCCc
Q 047013 293 --GVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAEK-TVDNVPPWVLTVGASTTDREFSSYVTLGNK 369 (781)
Q Consensus 293 --g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~d~~~~~~~~~~~~ 369 (781)
+++|||||||.. ....+..++.++.++|++||+||||+|.... .++...+++|+|||++.+
T Consensus 119 ~~~~~Vin~S~G~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------ 182 (284)
T 1sh7_A 119 ASGPSVANMSLGGG----QSTALDSAVQGAIQSGVSFMLAAGNSNADACNTSPARVPSGVTVGSTTSS------------ 182 (284)
T ss_dssp CCSSEEEEECCCBS----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGSBTTTCTTSEEEEEECTT------------
T ss_pred CCCCcEEEeCCCCC----CCHHHHHHHHHHHHCCCEEEEECCcCCCCCCccccccCCCeEEEEEecCC------------
Confidence 799999999987 3456788888999999999999999997543 345677999999985422
Q ss_pred eEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceEEEE
Q 047013 370 MVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVGMIL 449 (781)
Q Consensus 370 ~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g~i~ 449 (781)
T Consensus 183 -------------------------------------------------------------------------------- 182 (284)
T 1sh7_A 183 -------------------------------------------------------------------------------- 182 (284)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccCeee
Q 047013 450 ANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPDVI 529 (781)
Q Consensus 450 ~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~ 529 (781)
+.++.||++||++ ||+
T Consensus 183 --------------------------------------------------------~~~~~~S~~G~~~--------di~ 198 (284)
T 1sh7_A 183 --------------------------------------------------------DSRSSFSNWGSCV--------DLF 198 (284)
T ss_dssp --------------------------------------------------------SBBCTTCCBSTTC--------CEE
T ss_pred --------------------------------------------------------CCcCcccCCCCcc--------EEE
Confidence 5788999999977 999
Q ss_pred eCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccC
Q 047013 530 APGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTATTE 600 (781)
Q Consensus 530 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~~~ 600 (781)
|||++|+++++.+ .|..++|||||||||||++|||+|++|+|++++||++|++||++.
T Consensus 199 ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 256 (284)
T 1sh7_A 199 APGSQIKSAWYDG-------------GYKTISGTSMATPHVAGVAALYLQENNGLTPLQLTGLLNSRASEN 256 (284)
T ss_dssp EECSSEEEECTTS-------------SEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred eccCCeEEecCCC-------------CEEEccChHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCccC
Confidence 9999999998764 799999999999999999999999999999999999999999875
No 25
>1wmd_A Protease; alpha-beta hydrolase fold, jelly-roll beta-barrel, hydrolase; 1.30A {Bacillus SP} SCOP: b.18.1.20 c.41.1.1 PDB: 1wme_A 1wmf_A
Probab=100.00 E-value=2.6e-48 Score=436.04 Aligned_cols=294 Identities=24% Similarity=0.296 Sum_probs=225.0
Q ss_pred ccccc-cCCCCCceEEEEecCCCCc------CCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhh
Q 047013 133 DSAWN-KARFGEDVIIGNLDSGVWP------ESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESC 205 (781)
Q Consensus 133 ~~~w~-~~~~G~gv~VaVIDtGid~------~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~ 205 (781)
+.+|. .+++|+||+|||||||||+ .||+|.++ +...++|.+.
T Consensus 11 ~~~~~~~g~~G~gv~VaViDtGvd~~~~~~~~hp~l~~~--------------------------i~~~~~~~~~----- 59 (434)
T 1wmd_A 11 DVAQSSYGLYGQGQIVAVADTGLDTGRNDSSMHEAFRGK--------------------------ITALYALGRT----- 59 (434)
T ss_dssp HHHHHHHCCSCTTCEEEEEESCCTTSCSSTTSCTTTTTC--------------------------EEEEEETTTT-----
T ss_pred hhhhhccCCCCcccEEEEEecCcCCCCCCcccCcccCCC--------------------------EeeeccccCC-----
Confidence 37897 7999999999999999999 79999753 4444444321
Q ss_pred ccCCCCCccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHH
Q 047013 206 RAMNSSFLVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAG 285 (781)
Q Consensus 206 ~~~~~~~~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~a 285 (781)
..+.|..||||||||||+|+.. .+.||||+|+|+.+|+++..+.. .+...++.++
T Consensus 60 -------------~~~~d~~gHGT~VAgiiag~g~-----------~~~GvAp~a~l~~~~v~~~~g~~-~~~~~~~~~a 114 (434)
T 1wmd_A 60 -------------NNANDTNGHGTHVAGSVLGNGS-----------TNKGMAPQANLVFQSIMDSGGGL-GGLPSNLQTL 114 (434)
T ss_dssp -------------TCCCCSSSHHHHHHHHHHCCSS-----------SSCCSSTTSEEEEEECCCTTSSC-TTSCSSHHHH
T ss_pred -------------CCCCCCCCcHHHHHHHHHcCCC-----------CceeeCCCCEEEEEEeecCCCcc-ccccHHHHHH
Confidence 2456789999999999998641 24799999999999999766521 1245789999
Q ss_pred HHHhhhcCCcEEEecCCCCCCCCCCChHHHHHHHH-HhCCCEEEEecCCCCCCCC--CccCCCCceEEecccCCceeeee
Q 047013 286 FDVAIHDGVDIISASLGSKPKEHFESSVAVGSFHA-MMHGILVVASAGNSGPAEK--TVDNVPPWVLTVGASTTDREFSS 362 (781)
Q Consensus 286 i~~a~~~g~dVIN~SlG~~~~~~~~~~~~~a~~~a-~~~Gi~vV~AAGN~g~~~~--~~~~~~p~vitVgA~~~d~~~~~ 362 (781)
|++++++|++|||||||......+ +....++.++ .++|++||+||||+|.... ..++..+++|+|||++..+...
T Consensus 115 i~~a~~~g~~Vin~S~G~~~~~~~-~~~~~~id~~~~~~gvlvV~AAGN~g~~~~~~~~Pa~~~~vitVga~~~~~~~~- 192 (434)
T 1wmd_A 115 FSQAYSAGARIHTNSWGAAVNGAY-TTDSRNVDDYVRKNDMTILFAAGNEGPNGGTISAPGTAKNAITVGATENLRPSF- 192 (434)
T ss_dssp HHHHHHTTCSEEEECCCBCCTTCC-CHHHHHHHHHHHHSSCEEEEECCSCTTSSSCCCBSTTCSSSEEEEEECCSCGGG-
T ss_pred HHHHHhcCCeEEEecCCCCcCCcC-CHHHHHHHHHHhCCCeEEEEECCCCCCCCcccCCcccCCccEEEecccccCccc-
Confidence 999999999999999998742222 4455666665 5899999999999997643 3455789999999965432000
Q ss_pred eEEeCCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhc
Q 047013 363 YVTLGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQA 442 (781)
Q Consensus 363 ~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~ 442 (781)
.
T Consensus 193 ----------------------------------------------~--------------------------------- 193 (434)
T 1wmd_A 193 ----------------------------------------------G--------------------------------- 193 (434)
T ss_dssp ----------------------------------------------C---------------------------------
T ss_pred ----------------------------------------------C---------------------------------
Confidence 0
Q ss_pred CceEEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCC
Q 047013 443 GAVGMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPA 522 (781)
Q Consensus 443 Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~ 522 (781)
......+.+++|||+||+. ++
T Consensus 194 ---------------------------------------------------------~~~~~~~~~a~fS~~G~~~--~g 214 (434)
T 1wmd_A 194 ---------------------------------------------------------SYADNINHVAQFSSRGPTK--DG 214 (434)
T ss_dssp ---------------------------------------------------------GGGSCTTSBCTTSCCCCCT--TS
T ss_pred ---------------------------------------------------------cccCCCCccccccCCCCCC--CC
Confidence 0001136899999999998 99
Q ss_pred CccCeeeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCC-----CHHHHHHHHHhcc
Q 047013 523 ILKPDVIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDW-----SPAAIKSAIMTTA 597 (781)
Q Consensus 523 ~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~l-----t~~~ik~~L~~TA 597 (781)
++||||+|||++|+++++........ .......|..++|||||||||||++|||+|++|++ ++++||++|++||
T Consensus 215 ~~kpdi~ApG~~i~s~~~~~~~~~~~-~~~~~~~~~~~sGTS~AaP~vaG~aAll~~~~~~~~~~~~s~~~vk~~L~~tA 293 (434)
T 1wmd_A 215 RIKPDVMAPGTFILSARSSLAPDSSF-WANHDSKYAYMGGTSMATPIVAGNVAQLREHFVKNRGITPKPSLLKAALIAGA 293 (434)
T ss_dssp CCCCCEEEECSSEEEECCTTCCGGGS-SEEEETTEEEECSHHHHHHHHHHHHHHHHHHHHHHSSSCCCHHHHHHHHHHHC
T ss_pred CCCceEEcCCCCeEecCCCCCCCccc-ccCCCCceEeecchhHHHHHHHHHHHHHHHHHHhccCCCCCHHHHHHHHHcCC
Confidence 99999999999999998642210000 00012479999999999999999999999998865 8999999999999
Q ss_pred ccCCCCCCcccccCCCCCCCCCcccCCcccccccCCCC
Q 047013 598 TTEDSSKHPILDQVTGQKATPFAYGAGHVNPNSALDPG 635 (781)
Q Consensus 598 ~~~~~~g~~~~~~~~~~~~~~~~~G~G~in~~~Av~~~ 635 (781)
+++.. .++.+.||||++|+.+|++..
T Consensus 294 ~~~~~------------~~~~~~~G~G~vd~~~a~~~~ 319 (434)
T 1wmd_A 294 ADIGL------------GYPNGNQGWGRVTLDKSLNVA 319 (434)
T ss_dssp BCCSS------------CSSCTTTTTCBCCHHHHHTCE
T ss_pred cccCC------------CCCCccCCcCeEeHHHhcccc
Confidence 87521 235678999999999999754
No 26
>2b6n_A Proteinase K; S binding, substrate specificity, proteinase K, subtilase, psychrotrophic, psychrophilic, hydrolase; 1.80A {Serratia SP}
Probab=100.00 E-value=1.5e-47 Score=403.71 Aligned_cols=237 Identities=29% Similarity=0.385 Sum_probs=201.6
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSF 212 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (781)
..+|..+++|+||+|+|||||||++||+|.++ +...++|.++
T Consensus 21 ~~~~~~~~~G~gv~VaViDtGid~~Hpdl~~~--------------------------~~~~~d~~~~------------ 62 (278)
T 2b6n_A 21 DNNYHTDYDGSGVTAFVIDTGVLNTHNEFGGR--------------------------ASSGYDFIDN------------ 62 (278)
T ss_dssp CSEEECSCCCTTCEEEEEESCCCTTCGGGTTC--------------------------EEEEEETTTT------------
T ss_pred chhcccCCCCCCCEEEEEeCCCCCCChhHhcc--------------------------cccCeecCCC------------
Confidence 57899999999999999999999999999753 3334444432
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhh-
Q 047013 213 LVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIH- 291 (781)
Q Consensus 213 ~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~- 291 (781)
...+.|..||||||||||+|.. .||||+|+|+.+|++++.+ .+..+++++||+|+++
T Consensus 63 -----~~~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g---~~~~~~~~~ai~~a~~~ 120 (278)
T 2b6n_A 63 -----DYDATDCNGHGTHVAGTIGGST--------------YGVAKNVNVVGVRVLNCSG---SGSNSGVIAGINWVKNN 120 (278)
T ss_dssp -----BSCCCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS---CCCHHHHHHHHHHHHHH
T ss_pred -----CCCCCCCCCcHHHHHHHHHCCC--------------cCCCCCCeEEEEEEECCCC---CccHHHHHHHHHHHHhC
Confidence 1245688999999999999873 6999999999999998776 4788999999999997
Q ss_pred -cCCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCCC-ccCCCCceEEecccCCceeeeeeEEeCCc
Q 047013 292 -DGVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAEKT-VDNVPPWVLTVGASTTDREFSSYVTLGNK 369 (781)
Q Consensus 292 -~g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~vitVgA~~~d~~~~~~~~~~~~ 369 (781)
.+++|||||||... ...+..++.++.++|++||+||||+|..... ++...+++|+|||++.+
T Consensus 121 ~~g~~Vin~S~G~~~----~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------------ 184 (278)
T 2b6n_A 121 ASGPAVANMSLGGGA----SQATDDAVNAAVAAGITFVVAAGNDNSNACNYSPARAADAITVGSTTSN------------ 184 (278)
T ss_dssp CCSSEEEEECCCEEC----CHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT------------
T ss_pred CCCCeEEEECCCCCc----CHHHHHHHHHHHHCCCEEEEEeCCCCCCCCCcCcccCCCeEEEEeeCCC------------
Confidence 59999999999863 4567788888999999999999999976543 45577999999985422
Q ss_pred eEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceEEEE
Q 047013 370 MVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVGMIL 449 (781)
Q Consensus 370 ~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g~i~ 449 (781)
T Consensus 185 -------------------------------------------------------------------------------- 184 (278)
T 2b6n_A 185 -------------------------------------------------------------------------------- 184 (278)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccCeee
Q 047013 450 ANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPDVI 529 (781)
Q Consensus 450 ~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~ 529 (781)
+.++.||++||.+ ||+
T Consensus 185 --------------------------------------------------------~~~~~~S~~G~~~--------di~ 200 (278)
T 2b6n_A 185 --------------------------------------------------------DSRSSFSNYGTCL--------DIY 200 (278)
T ss_dssp --------------------------------------------------------SBBCTTCCBSTTC--------CEE
T ss_pred --------------------------------------------------------CCcCCcCCCCCCC--------eEE
Confidence 4778999999866 999
Q ss_pred eCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccC
Q 047013 530 APGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTATTE 600 (781)
Q Consensus 530 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~~~ 600 (781)
|||++|++++.... ..|..++|||||||||||++|||+|++|+|++++||++|++||++.
T Consensus 201 ApG~~i~s~~~~~~-----------~~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~ 260 (278)
T 2b6n_A 201 APGSSITSSWYTSN-----------SATNTISGTSMASPHVAGVAALYLDENPNLSPAQVTNLLKTRATAD 260 (278)
T ss_dssp EECSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEES
T ss_pred eCCCCeECcccCCC-----------CCEEEeCcHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccC
Confidence 99999999986532 2799999999999999999999999999999999999999999874
No 27
>4dzt_A Aqualysin-1, aqualysin-I; serine protease, calcium binding, inhibitor, hydrolase-hydro inhibitor complex; HET: PMS; 1.95A {Thermus aquaticus}
Probab=100.00 E-value=9.3e-48 Score=405.58 Aligned_cols=236 Identities=28% Similarity=0.366 Sum_probs=203.3
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSF 212 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (781)
..+|..+++|+||+|||||||||++||+|.++ +...++|..
T Consensus 21 ~~a~~~~~~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~------------- 61 (276)
T 4dzt_A 21 SNSYTYTATGRGVNVYVIDTGIRTTHREFGGR--------------------------ARVGYDALG------------- 61 (276)
T ss_dssp CSCEECSCCCTTCEEEEEESCCCTTCGGGTTC--------------------------EEEEEETTS-------------
T ss_pred ccceecCCCCCCcEEEEEccCCCCCChhHccC--------------------------eeccccCCC-------------
Confidence 57899999999999999999999999999753 333333332
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhc
Q 047013 213 LVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHD 292 (781)
Q Consensus 213 ~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~ 292 (781)
....|..||||||||||+|.. .||||+|+|+.+|++++.+ .+..+.++++++|+++.
T Consensus 62 ------~~~~d~~gHGT~vAgiiag~~--------------~GvAp~a~l~~~~v~~~~~---~~~~~~~~~ai~~~~~~ 118 (276)
T 4dzt_A 62 ------GNGQDCNGHGTHVAGTIGGVT--------------YGVAKAVNLYAVRVLDCNG---SGSTSGVIAGVDWVTRN 118 (276)
T ss_dssp ------SCSCCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS---CCCHHHHHHHHHHHHHH
T ss_pred ------CCCCCCCCCHHHHHHHHHccc--------------cCCCCCCEEEEEEEeCCCC---CcCHHHHHHHHHHHHhc
Confidence 145678999999999999873 7999999999999998776 57889999999999987
Q ss_pred --CCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCCCc-cCCCCceEEecccCCceeeeeeEEeCCc
Q 047013 293 --GVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAEKTV-DNVPPWVLTVGASTTDREFSSYVTLGNK 369 (781)
Q Consensus 293 --g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~-~~~~p~vitVgA~~~d~~~~~~~~~~~~ 369 (781)
+++|||||||.. ....+..++.++.++|+++|+||||+|...... +...+++|+|||++.
T Consensus 119 ~~~~~vin~S~g~~----~~~~~~~a~~~a~~~gvlvv~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~------------- 181 (276)
T 4dzt_A 119 HRRPAVANMSLGGG----VSTALDNAVKNSIAAGVVYAVAAGNDNANACNYSPARVAEALTVGATTS------------- 181 (276)
T ss_dssp CCSSEEEEECCCEE----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECT-------------
T ss_pred CCCCeEEEECCCCC----CCHHHHHHHHHHHhCCCEEEEECCCCCCCCCCcCcccCCCEEEEEEECC-------------
Confidence 899999999976 346688888999999999999999999765443 567789999998432
Q ss_pred eEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceEEEE
Q 047013 370 MVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVGMIL 449 (781)
Q Consensus 370 ~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g~i~ 449 (781)
T Consensus 182 -------------------------------------------------------------------------------- 181 (276)
T 4dzt_A 182 -------------------------------------------------------------------------------- 181 (276)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccCeee
Q 047013 450 ANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKPDVI 529 (781)
Q Consensus 450 ~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~ 529 (781)
.+.++.||++||+. ||+
T Consensus 182 -------------------------------------------------------~~~~~~~S~~g~~~--------dv~ 198 (276)
T 4dzt_A 182 -------------------------------------------------------SDARASFSNYGSCV--------DLF 198 (276)
T ss_dssp -------------------------------------------------------TSBBCTTCCBSTTC--------CEE
T ss_pred -------------------------------------------------------CCCcCCcCCCCCCc--------eEE
Confidence 25788999999987 999
Q ss_pred eCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCC
Q 047013 530 APGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTATTED 601 (781)
Q Consensus 530 APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~~~~ 601 (781)
|||++|++++..... .|..++|||||||+|||++|||+|++|++++++||++|++||++..
T Consensus 199 ApG~~i~s~~~~~~~-----------~~~~~sGTS~AaP~vaG~aAll~~~~p~lt~~~v~~~L~~tA~~~~ 259 (276)
T 4dzt_A 199 APGASIPSAWYTSDT-----------ATQTLNGTSMATPHVAGVAALYLEQNPSATPASVASAILNGATTGR 259 (276)
T ss_dssp EECSSEEEECTTSSS-----------CEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHSEESC
T ss_pred eCCCCeEccccCCCC-----------ceEEeeEHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHhhCcCCc
Confidence 999999999876432 7999999999999999999999999999999999999999999864
No 28
>2pwa_A Proteinase K; structure, alanine boronic acid, hydrolase; 0.83A {Engyodontium album} SCOP: c.41.1.1 PDB: 1p7v_A 1p7w_A 2dqk_A 2duj_A 2g4v_A 2hd4_A 2hpz_A 2id8_A 2pq2_A 1ic6_A 2pwb_A* 2pyz_A* 2v8b_A 3aj8_A 3aj9_A 3dyb_A* 3gt3_A* 3gt4_A* 3l1k_A 3osz_A ...
Probab=100.00 E-value=1.6e-47 Score=403.06 Aligned_cols=240 Identities=32% Similarity=0.387 Sum_probs=202.9
Q ss_pred ccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCCcc
Q 047013 135 AWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSFLV 214 (781)
Q Consensus 135 ~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~~ 214 (781)
.|. ..+|+||+|+|||||||++||+|.++ +...++|.+
T Consensus 24 ~~~-~~~G~gv~VaViDsGvd~~H~~l~~~--------------------------~~~~~~~~~--------------- 61 (279)
T 2pwa_A 24 YYD-ESAGQGSCVYVIDTGIEASHPEFEGR--------------------------AQMVKTYYY--------------- 61 (279)
T ss_dssp ECC-TTTTTTEEEEEEESCCCTTCGGGTTC--------------------------EEEEEESSS---------------
T ss_pred ccc-CCCCCCCEEEEEeCCCCCCChhHhCc--------------------------cccccCCCC---------------
Confidence 454 37999999999999999999999753 333334431
Q ss_pred CCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhcCC
Q 047013 215 PENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHDGV 294 (781)
Q Consensus 215 p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~g~ 294 (781)
...|..||||||||||+|+. .||||+|+|+.+|++++.+ .++.+++++||+|++++++
T Consensus 62 -----~~~d~~gHGT~vAgiia~~~--------------~GvAp~a~i~~~~v~~~~g---~~~~~~~~~ai~~a~~~~~ 119 (279)
T 2pwa_A 62 -----SSRDGNGHGTHCAGTVGSRT--------------YGVAKKTQLFGVKVLDDNG---SGQYSTIIAGMDFVASDKN 119 (279)
T ss_dssp -----CSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS---CCCHHHHHHHHHHHHHHGG
T ss_pred -----CCCCCCCCHHHHHHHHHhcc--------------cccCCCCEEEEEEeEcCCC---CcCHHHHHHHHHHHHhcCc
Confidence 34578999999999999873 7999999999999998776 4788999999999999887
Q ss_pred -------cEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCC-CccCCCCceEEecccCCceeeeeeEEe
Q 047013 295 -------DIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAEK-TVDNVPPWVLTVGASTTDREFSSYVTL 366 (781)
Q Consensus 295 -------dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~-~~~~~~p~vitVgA~~~d~~~~~~~~~ 366 (781)
+|||||||.. ....+..++.++.++|++||+||||+|.... .++...+++|+|||++.+
T Consensus 120 ~~~~~~~~Vin~S~G~~----~~~~~~~ai~~a~~~gi~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~--------- 186 (279)
T 2pwa_A 120 NRNCPKGVVASLSLGGG----YSSSVNSAAARLQSSGVMVAVAAGNNNADARNYSPASEPSVCTVGASDRY--------- 186 (279)
T ss_dssp GSCCTTEEEEEECCCEE----CCHHHHHHHHHHHHTTEEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT---------
T ss_pred cccCCCccEEEecCCCC----CCHHHHHHHHHHHHCCCEEEEECCCCCCcCCCcCcccCCcEEEEEEecCC---------
Confidence 9999999976 3456888888999999999999999997643 345677999999985422
Q ss_pred CCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceE
Q 047013 367 GNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVG 446 (781)
Q Consensus 367 ~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g 446 (781)
T Consensus 187 -------------------------------------------------------------------------------- 186 (279)
T 2pwa_A 187 -------------------------------------------------------------------------------- 186 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCccC
Q 047013 447 MILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAILKP 526 (781)
Q Consensus 447 ~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~KP 526 (781)
+.++.||++||++
T Consensus 187 -----------------------------------------------------------~~~~~~S~~G~~~-------- 199 (279)
T 2pwa_A 187 -----------------------------------------------------------DRRSSFSNYGSVL-------- 199 (279)
T ss_dssp -----------------------------------------------------------SBBCTTCCBSTTC--------
T ss_pred -----------------------------------------------------------CCcCCcCCCCCcc--------
Confidence 5788999999976
Q ss_pred eeeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCc
Q 047013 527 DVIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTATTEDSSKHP 606 (781)
Q Consensus 527 DI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~~~~~~g~~ 606 (781)
||+|||++|+++++.+ .|..++|||||||||||++|||+|+ |++++.+||++|++||++...
T Consensus 200 di~APG~~i~s~~~~~-------------~~~~~sGTS~AaP~VaG~aAll~~~-p~lt~~~v~~~L~~tA~~~~~---- 261 (279)
T 2pwa_A 200 DIFGPGTDILSTWIGG-------------STRSISGTSMATPHVAGLAAYLMTL-GKTTAASACRYIADTANKGDL---- 261 (279)
T ss_dssp CEEEECSSEEEEETTT-------------EEEEECSHHHHHHHHHHHHHHHHHT-TSCCTTTHHHHHHHHSEESCC----
T ss_pred eEEEecCCeEEeecCC-------------CEEEcCChHHHHHHHHHHHHHHHhC-CCCCHHHHHHHHHHhCccccc----
Confidence 9999999999999864 7999999999999999999999999 999999999999999987521
Q ss_pred ccccCCCCCCCCCcccCCcccc
Q 047013 607 ILDQVTGQKATPFAYGAGHVNP 628 (781)
Q Consensus 607 ~~~~~~~~~~~~~~~G~G~in~ 628 (781)
..+|+|..|+
T Consensus 262 ------------~~~~~g~~n~ 271 (279)
T 2pwa_A 262 ------------SNIPFGTVNL 271 (279)
T ss_dssp ------------BSCCTTSCCE
T ss_pred ------------CCCCCCCccE
Confidence 2467888776
No 29
>2oxa_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria} PDB: 3hjr_A
Probab=100.00 E-value=3.4e-46 Score=434.77 Aligned_cols=301 Identities=20% Similarity=0.190 Sum_probs=204.9
Q ss_pred CccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCC
Q 047013 132 PDSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSS 211 (781)
Q Consensus 132 ~~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 211 (781)
+..+|..+++|+||+|||||||||++||+|.++- +.+.++|..+.
T Consensus 59 ~~~aw~~g~~G~gV~VaViDtGid~~Hpdl~~~~-------------------------~~~~~~~~~~~---------- 103 (600)
T 2oxa_A 59 LWWAHRTGVLGHGVNVAVVDDGLAIAHPDLADNV-------------------------RPGSKNVVTGS---------- 103 (600)
T ss_dssp CHHHHHTTCSCTTCEEEEESSCCCTTCTTTGGGB-------------------------CSCCBCTTTCS----------
T ss_pred hHHHHhcCCCCCCcEEEEecCCcCCCCcchhhcc-------------------------ccCceeccCCC----------
Confidence 3689999999999999999999999999998531 11223333220
Q ss_pred CccCCCCCCCC-CCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCC-hHHHHHHHHHh
Q 047013 212 FLVPENLTTSI-DHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCN-AADIIAGFDVA 289 (781)
Q Consensus 212 ~~~p~~~~~~~-d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~-~~~i~~ai~~a 289 (781)
+...+. |.+||||||||||||. .++ ..+.||||+|+|+.+|+++..+. .. ...+++....+
T Consensus 104 -----~d~~p~d~~~gHGT~vAGiiaa~-~n~--------~g~~GVAp~A~l~~vkv~~~~~~---~~~~~~~~~~~~~a 166 (600)
T 2oxa_A 104 -----DDPTPTDPDTGHGTSVSGIIAAV-DNA--------IGTKGIAPRAQLQGFNLLDDNSQ---QLQKDWLYALGDSN 166 (600)
T ss_dssp -----SCCCCCSTTCCHHHHHHHHHHCC-SSS--------SSCCCSSTTCEEEEECTTSTTCC---CCHHHHHHHTTTSH
T ss_pred -----CCCCCCCCCCCCccHHHHHhhcc-cCC--------CcceEEccCCceEEEeeecCccc---chHHHHHHHHhhhh
Confidence 011223 4789999999999998 322 22489999999999999987651 21 23444444446
Q ss_pred hhcCCcEEEecCCCCCC-CCCCChH----HHHHHH---HHhCCCEEEEecCCCCCCCC----------------------
Q 047013 290 IHDGVDIISASLGSKPK-EHFESSV----AVGSFH---AMMHGILVVASAGNSGPAEK---------------------- 339 (781)
Q Consensus 290 ~~~g~dVIN~SlG~~~~-~~~~~~~----~~a~~~---a~~~Gi~vV~AAGN~g~~~~---------------------- 339 (781)
..++++|||||||.... ....+.+ ..++.. +.++|++||+||||+|....
T Consensus 167 ~~~~~~Vin~S~G~~~~~~~~~~~~~~~~~~~~~~~~~a~~~GilvV~AAGN~g~~~~~~~~~~~Pa~~~~~~p~~~~n~ 246 (600)
T 2oxa_A 167 ASRDNRVFNHSYRMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGGYVLNRTGNGPKLPFENSNL 246 (600)
T ss_dssp HHHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETTEEEEEESCSSCCCSSBTTS
T ss_pred cccCCeEEEEeccCCCCCccccCchhHHHHHHHHHHHHhccCCcEEEEecCCCCccCCCCcceecCcccccccccccccc
Confidence 77899999999998732 1122222 222222 34789999999999986321
Q ss_pred CccCCCCceEEecccCCceeeeeeEEeCCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCc
Q 047013 340 TVDNVPPWVLTVGASTTDREFSSYVTLGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKV 419 (781)
Q Consensus 340 ~~~~~~p~vitVgA~~~d~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~ 419 (781)
...+.++|+|+|||+
T Consensus 247 ~~~~~s~~vItVgA~----------------------------------------------------------------- 261 (600)
T 2oxa_A 247 DPSNSNFWNLVVSAL----------------------------------------------------------------- 261 (600)
T ss_dssp SGGGGSSSEEEEEEE-----------------------------------------------------------------
T ss_pred CCcccCceeEEEecc-----------------------------------------------------------------
Confidence 001123445555552
Q ss_pred eeEEEEEecCCcchHHHHHHHhcCceEEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceee
Q 047013 420 KGKILICYDAKIGDAKGQRAAQAGAVGMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITE 499 (781)
Q Consensus 420 ~gkivl~~~g~~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~ 499 (781)
T Consensus 262 -------------------------------------------------------------------------------- 261 (600)
T 2oxa_A 262 -------------------------------------------------------------------------------- 261 (600)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eccccCCccccccCCCCCCCCCCCccCeeeeCCCcEEeeec-------CCCCCC--------------CCCCCCCcccce
Q 047013 500 FNKIWSRMTSFFSARGPNLIDPAILKPDVIAPGVDIIAAFT-------NEYGPS--------------HEEFDPRRVPYN 558 (781)
Q Consensus 500 ~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~-------~~~~~~--------------~~~~~~~~~~y~ 558 (781)
...+.++.||++||+. ||+|||++|.+..+ .+.... ....+.....|.
T Consensus 262 ---~~~g~~a~fS~~G~~v--------dv~APG~~i~~~~p~i~ttd~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~y~ 330 (600)
T 2oxa_A 262 ---NADGVRSSYSSVGSNI--------FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNG 330 (600)
T ss_dssp ---CTTSSBCTTCCBCTTE--------EEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEE
T ss_pred ---cCCCCcCCcCCCCCCe--------EEEeccCCCCcCCCceEeccccccccccccccccccccccccccccCCccccc
Confidence 2246889999999998 99999999644322 110000 000111223489
Q ss_pred eeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccCCCCCCccc-----------------cc--CCCCCCCCC
Q 047013 559 VMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTATTEDSSKHPIL-----------------DQ--VTGQKATPF 619 (781)
Q Consensus 559 ~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~~~~~~g~~~~-----------------~~--~~~~~~~~~ 619 (781)
.++|||||||||||++|||+|++|+|++++||++|++||++++..+.++. +. ........+
T Consensus 331 ~~sGTS~AaP~VAGvaALl~s~~P~lt~~~vk~~L~~tA~~~~~~~~~~~~~~~~~~G~~~~~~~~~~w~~n~~g~~~~~ 410 (600)
T 2oxa_A 331 VMNGTSSATPSTSGAMALLMSAYPDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSP 410 (600)
T ss_dssp EECSHHHHHHHHHHHHHHHHHHSTTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBT
T ss_pred ccccchHHhHHHHHHHHHHHHhCCCCCHHHHHHHHHHhCccCCcccccccccccccccccccccccccccccCCCccccc
Confidence 99999999999999999999999999999999999999999865442211 00 112223457
Q ss_pred cccCCcccccccCCCCeeecC
Q 047013 620 AYGAGHVNPNSALDPGLVYDL 640 (781)
Q Consensus 620 ~~G~G~in~~~Av~~~l~~~~ 640 (781)
.||||+||+.+|++.+..|..
T Consensus 411 ~~G~G~vda~~Av~~A~~~~~ 431 (600)
T 2oxa_A 411 TYGFGLIDVNKALELAANHQP 431 (600)
T ss_dssp TTBTCBCCHHHHHHHHTTCCC
T ss_pred cCCCchhhHHHHHHHHHhccc
Confidence 899999999999996654443
No 30
>1p8j_A Furin precursor; prohormone convertase, SPC1, PACE, P-domain; HET: DKA AR7 NAG FUL BMA MAN GAL FUC; 2.60A {Mus musculus} SCOP: b.18.1.20 c.41.1.1
Probab=100.00 E-value=6.9e-47 Score=428.05 Aligned_cols=293 Identities=15% Similarity=0.196 Sum_probs=218.7
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSF 212 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (781)
..+|..+++|+||+|||||||||++||+|.++- .....++|.++ .
T Consensus 28 ~~aw~~g~~G~gv~VaViDtGvd~~Hpdl~~~~------------------------~~~~~~d~~~~------~----- 72 (471)
T 1p8j_A 28 KEAWAQGFTGHGIVVSILDDGIEKNHPDLAGNY------------------------DPGASFDVNDQ------D----- 72 (471)
T ss_dssp HHHHHTTCSCTTCEEEEEEBCCCTTCTTTGGGB------------------------CGGGCEETTTT------B-----
T ss_pred HHHHhcCCCCCCCEEEEEeCCcCCCChhHhhcc------------------------CccCcccccCC------C-----
Confidence 689999999999999999999999999998630 00012233322 0
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhh-
Q 047013 213 LVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIH- 291 (781)
Q Consensus 213 ~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~- 291 (781)
.+|.+.....|.+||||||||||||...++. .+.||||+|+|+.+|+++ +..+++++|++++++
T Consensus 73 ~~p~~~~~~~d~~gHGT~vAGiiaa~~~n~~--------g~~GvAp~a~i~~~rv~~-------g~~~~~~~ai~~a~~~ 137 (471)
T 1p8j_A 73 PDPQPRYTQMNDNRHGTRCAGEVAAVANNGV--------CGVGVAYNARIGGVRMLD-------GEVTDAVEARSLGLNP 137 (471)
T ss_dssp SCCCCCCCTTCTTCHHHHHHHHHHCCSSSSS--------SCCCTTTTSEEEEEECSS-------SCCCHHHHHHHHTSCT
T ss_pred CCCCCccCCCCCCCcHHHHHHHHHeeccCCC--------CCEEECCCCeEEEEEccC-------CchhHHHHHHHhhhcc
Confidence 0112222456889999999999999754322 248999999999999985 335789999999999
Q ss_pred cCCcEEEecCCCCCCC----CCCChHHHHHHHHH-----hCCCEEEEecCCCCCCCCC--c--cCCCCceEEecccCCce
Q 047013 292 DGVDIISASLGSKPKE----HFESSVAVGSFHAM-----MHGILVVASAGNSGPAEKT--V--DNVPPWVLTVGASTTDR 358 (781)
Q Consensus 292 ~g~dVIN~SlG~~~~~----~~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~~~~--~--~~~~p~vitVgA~~~d~ 358 (781)
++++|||||||..... .....+..++.++. .+|++||+||||+|..... . ...++++|+|||++.+
T Consensus 138 ~~~~Vin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~~~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vItVgA~~~~- 216 (471)
T 1p8j_A 138 NHIHIYSASWGPEDDGKTVDGPARLAEEAFFRGVSQGRGGLGSIFVWASGNGGREHDSCNCDGYTNSIYTLSISSATQF- 216 (471)
T ss_dssp TTCCEEEECCBSCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCBGGGBTTTTSTTEEEEEEECTT-
T ss_pred CCCeEEEeccCcCCCCCcccCcHHHHHHHHHHHHHhhccCCCeEEEEeCCCCCCCCCCcCcCcccCCCceEEEecccCC-
Confidence 9999999999986321 11223445555554 3699999999999975322 1 2245889999985432
Q ss_pred eeeeeEEeCCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHH
Q 047013 359 EFSSYVTLGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQR 438 (781)
Q Consensus 359 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~ 438 (781)
T Consensus 217 -------------------------------------------------------------------------------- 216 (471)
T 1p8j_A 217 -------------------------------------------------------------------------------- 216 (471)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHhcCceEEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCC
Q 047013 439 AAQAGAVGMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNL 518 (781)
Q Consensus 439 ~~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~ 518 (781)
+.++.||++||..
T Consensus 217 -------------------------------------------------------------------g~~a~~S~~g~~~ 229 (471)
T 1p8j_A 217 -------------------------------------------------------------------GNVPWYSEACSST 229 (471)
T ss_dssp -------------------------------------------------------------------SCCCTTCCBCTTC
T ss_pred -------------------------------------------------------------------CCcccccCCCCcc
Confidence 5788999999987
Q ss_pred CCCCCccCeeeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccc
Q 047013 519 IDPAILKPDVIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTAT 598 (781)
Q Consensus 519 ~~~~~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~ 598 (781)
....+|...+||..|+++...+ ..|..++|||||||||||++|||+|++|+|++++||++|++||+
T Consensus 230 --~~~~~~~~~~~g~~i~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~tA~ 295 (471)
T 1p8j_A 230 --LATTYSSGNQNEKQIVTTDLRQ------------KCTESHTGTSASAPLAAGIIALTLEANKNLTWRDMQHLVVQTSK 295 (471)
T ss_dssp --CEEEECCCSTTSCCEEEEETTT------------EEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHHHCB
T ss_pred --eEEeCCCCCCCCCCEEEeeCCC------------CccccCCCcccccchhhhHHHHHHhhCCCCCHHHHHHHHHhcCc
Confidence 5555666667778999997642 26899999999999999999999999999999999999999999
Q ss_pred cCCCCCCcccccCCCCCCCCCcccCCcccccccCCCCeee
Q 047013 599 TEDSSKHPILDQVTGQKATPFAYGAGHVNPNSALDPGLVY 638 (781)
Q Consensus 599 ~~~~~g~~~~~~~~~~~~~~~~~G~G~in~~~Av~~~l~~ 638 (781)
+++.....+.. ..........||||+||+.+|++.+..+
T Consensus 296 ~~~~~~~~~~~-n~~g~~~~~~~G~G~vda~~Av~~a~~~ 334 (471)
T 1p8j_A 296 PAHLNADDWAT-NGVGRKVSHSYGYGLLDAGAMVALAQNW 334 (471)
T ss_dssp CTTCCCSCCEE-CTTSCEEBTTTBTCBCCHHHHHHHHHTC
T ss_pred cCCCCCCCcee-cCCCcccCCCCCCEEEcHhHHHHHhhcc
Confidence 87643322221 1111224568999999999999865433
No 31
>3f7m_A Alkaline serine protease VER112; verticillium psalliotae, cuticle- degrading protease, nematodes, hydrolase, secreted, zymogen; 1.60A {Lecanicillium psalliotae} SCOP: c.41.1.1 PDB: 3f7o_A
Probab=100.00 E-value=3.6e-46 Score=394.06 Aligned_cols=230 Identities=30% Similarity=0.414 Sum_probs=197.2
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSF 212 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (781)
...|... +|+||+|||||||||++||+|.++ +...+.|..
T Consensus 23 ~~~~~~~-~G~gv~VaViDtGvd~~h~~l~~~--------------------------~~~~~~~~~------------- 62 (279)
T 3f7m_A 23 AYAYDTS-AGAGACVYVIDTGVEDTHPDFEGR--------------------------AKQIKSYAS------------- 62 (279)
T ss_dssp SEEECTT-TTTTEEEEEEESCCCTTCGGGTTC--------------------------EEEEEECSS-------------
T ss_pred ceeecCC-CCCCCEEEEEcCCCCCCChhhccc--------------------------cccccCCCC-------------
Confidence 3567666 999999999999999999999753 333333432
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhc
Q 047013 213 LVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHD 292 (781)
Q Consensus 213 ~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~ 292 (781)
...|..||||||||||+|+. .||||+|+|+.+|+++..+ .++.+.++++|+|++++
T Consensus 63 -------~~~d~~gHGT~vAgii~~~~--------------~GvAp~a~l~~~~v~~~~~---~~~~~~~~~ai~~~~~~ 118 (279)
T 3f7m_A 63 -------TARDGHGHGTHCAGTIGSKT--------------WGVAKKVSIFGVKVLDDSG---SGSLSNIIAGMDFVASD 118 (279)
T ss_dssp -------SSSCSSSHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS---CCCHHHHHHHHHHHHHH
T ss_pred -------CCCCCCCcHHHHHHHHhcCc--------------cccCCCCEEEEEEeeCCCC---CcCHHHHHHHHHHHHhc
Confidence 22378999999999999873 7999999999999998776 57889999999999987
Q ss_pred C-------CcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCCCc-cCCCCceEEecccCCceeeeeeE
Q 047013 293 G-------VDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAEKTV-DNVPPWVLTVGASTTDREFSSYV 364 (781)
Q Consensus 293 g-------~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~~-~~~~p~vitVgA~~~d~~~~~~~ 364 (781)
+ ++|||||||.. ....+..++..+.++|++||+||||+|...... +...+++|+|||++.+
T Consensus 119 ~~~~~~~~~~Vin~S~g~~----~~~~~~~a~~~a~~~gv~vV~AAGN~g~~~~~~~Pa~~~~vi~Vga~~~~------- 187 (279)
T 3f7m_A 119 RQSRNCPRRTVASMSLGGG----YSAALNQAAARLQSSGVFVAVAAGNDNRDAANTSPASEPTVCTVGATDSN------- 187 (279)
T ss_dssp GGGSCCTTEEEEEECCCEE----CCHHHHHHHHHHHHTTCEEEEECCSSSSBGGGEETTTCTTSEEEEEECTT-------
T ss_pred cccccCCCCeEEEeCCCcC----ccHHHHHHHHHHHHCCCEEEEEcCCCCCCCCCcCCCCCCCEEEEeecCCC-------
Confidence 6 89999999975 456788888999999999999999999765433 5577999999985422
Q ss_pred EeCCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCc
Q 047013 365 TLGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGA 444 (781)
Q Consensus 365 ~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga 444 (781)
T Consensus 188 -------------------------------------------------------------------------------- 187 (279)
T 3f7m_A 188 -------------------------------------------------------------------------------- 187 (279)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCCCc
Q 047013 445 VGMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPAIL 524 (781)
Q Consensus 445 ~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~~~ 524 (781)
+.++.||++||.+
T Consensus 188 -------------------------------------------------------------~~~~~~S~~g~~~------ 200 (279)
T 3f7m_A 188 -------------------------------------------------------------DVRSTFSNYGRVV------ 200 (279)
T ss_dssp -------------------------------------------------------------SBBCTTCCBSTTC------
T ss_pred -------------------------------------------------------------CCCCCCCCCCCCC------
Confidence 5788999999976
Q ss_pred cCeeeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccC
Q 047013 525 KPDVIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTATTE 600 (781)
Q Consensus 525 KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~~~ 600 (781)
||+|||++|+++++.+ .|..++|||||||||||++|||+|++|. ++++||++|++||++.
T Consensus 201 --di~ApG~~i~s~~~~~-------------~~~~~sGTS~AaP~vaG~aAll~~~~p~-t~~~v~~~L~~tA~~~ 260 (279)
T 3f7m_A 201 --DIFAPGTSITSTWIGG-------------RTNTISGTSMATPHIAGLAAYLFGLEGG-SAGAMCGRIQTLSTKN 260 (279)
T ss_dssp --CEEEECSSEEEECGGG-------------CEEEECSHHHHHHHHHHHHHHHHHHTCC-CTTTHHHHHHHHSEES
T ss_pred --eEEECCCCeEeecCCC-------------CEEEeeEHHHHHHHHHHHHHHHHHhCCC-CHHHHHHHHHHhcccc
Confidence 9999999999998864 7899999999999999999999999999 9999999999999875
No 32
>2qtw_B Proprotein convertase subtilisin/kexin type 9; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_B 3bps_A 3gcw_A 3gcx_A 3p5b_A 3p5c_A 2pmw_B 3h42_B 2w2n_A 2w2m_A 2w2p_A 2w2q_A 2xtj_A 2w2o_A
Probab=100.00 E-value=5e-46 Score=415.94 Aligned_cols=243 Identities=20% Similarity=0.253 Sum_probs=189.2
Q ss_pred cccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCCc
Q 047013 134 SAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSFL 213 (781)
Q Consensus 134 ~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~~ 213 (781)
..|..+++|+||+|+|||||||++||+|.++- ......+... .++.
T Consensus 17 ~aw~~~~tG~GV~VaVIDTGId~~HpdL~gr~-------------------------~~~~~~~v~~---~dg~------ 62 (546)
T 2qtw_B 17 DEYQPPDGGSLVEVYLLDTSIQSDHREIEGRV-------------------------MVTDFENVPE---EDGT------ 62 (546)
T ss_dssp -------CCTTSEEEEEESCCCTTSTTTTTTE-------------------------EEEEEECCCC---CC--------
T ss_pred hhcccCCCCCCcEEEEECCCCCCCChHHcccc-------------------------cccCcccccC---CCCc------
Confidence 47888999999999999999999999998640 1111111100 0000
Q ss_pred cCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhc-
Q 047013 214 VPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHD- 292 (781)
Q Consensus 214 ~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~- 292 (781)
+ ......|..||||||||||+|+. .||||+|+|+.+|+++..+ .++.+++++||+|+++.
T Consensus 63 -~-f~~~~~D~~GHGThVAGIIag~~--------------~GVAP~A~L~~vkVl~~~G---~g~~s~ii~ai~~a~~~~ 123 (546)
T 2qtw_B 63 -R-FHRQASKCDSHGTHLAGVVSGRD--------------AGVAKGASMRSLRVLNCQG---KGTVSGTLIGLEFIRKSQ 123 (546)
T ss_dssp -------CTTTTHHHHHHHHHHHCTT--------------TCSSTTCEEEEEECSCTTS---EEEHHHHHHHHHHHHHHH
T ss_pred -c-ccCCCCCCCChHHHHHHHHhccC--------------CCcCCCCEEEEEEEECCCC---CcCHHHHHHHHHHHHHhh
Confidence 0 00245688999999999999874 6999999999999998776 47789999999999974
Q ss_pred -----CCcEEEecCCCCCCCCCCChHHHHHHHHHhCCCEEEEecCCCCCCCCC-ccCCCCceEEecccCCceeeeeeEEe
Q 047013 293 -----GVDIISASLGSKPKEHFESSVAVGSFHAMMHGILVVASAGNSGPAEKT-VDNVPPWVLTVGASTTDREFSSYVTL 366 (781)
Q Consensus 293 -----g~dVIN~SlG~~~~~~~~~~~~~a~~~a~~~Gi~vV~AAGN~g~~~~~-~~~~~p~vitVgA~~~d~~~~~~~~~ 366 (781)
+++|||||||+. +...+..++.++.++|++||+||||+|..... ++...+++|+|||++.+.
T Consensus 124 ~~~~~g~~VINmSlGg~----~s~~l~~Ai~~A~~~GvlvVaAAGN~g~d~~~~sPAs~~~VItVGA~d~~g-------- 191 (546)
T 2qtw_B 124 LVQPVGPLVVLLPLAGG----YSRVLNAACQRLARAGVVLVTAAGNFRDDACLYSPASAPEVITVGATNAQD-------- 191 (546)
T ss_dssp HHSCCSCEEEEECEEEE----CCHHHHHHHHHHHHTTCEEEEECCSBSSBGGGEETTTCTTSEEEEEECTTS--------
T ss_pred hhccCCCeEEEecCCCC----CcHHHHHHHHHHHhCCCEEEEECCCCCCCCCccCcccCCCEEEEEEecCCC--------
Confidence 899999999975 34567888889999999999999999976533 356779999999965431
Q ss_pred CCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhcCceE
Q 047013 367 GNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQAGAVG 446 (781)
Q Consensus 367 ~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~Ga~g 446 (781)
T Consensus 192 -------------------------------------------------------------------------------- 191 (546)
T 2qtw_B 192 -------------------------------------------------------------------------------- 191 (546)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccc----cccCCCCCCCCCC
Q 047013 447 MILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTS----FFSARGPNLIDPA 522 (781)
Q Consensus 447 ~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a----~fSs~Gp~~~~~~ 522 (781)
.++ .||++|+.+
T Consensus 192 ------------------------------------------------------------~~a~~s~~fSn~G~~v---- 207 (546)
T 2qtw_B 192 ------------------------------------------------------------QPVTLGTLGTNFGRCV---- 207 (546)
T ss_dssp ------------------------------------------------------------CBCEETTEECCBSTTC----
T ss_pred ------------------------------------------------------------CcccccCCcCCCCCcc----
Confidence 122 289999855
Q ss_pred CccCeeeeCCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhccccC
Q 047013 523 ILKPDVIAPGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTATTE 600 (781)
Q Consensus 523 ~~KPDI~APG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA~~~ 600 (781)
||+|||++|+++++... ..|..++|||||||||||++|||+|++|+|+++|||++|++||.+.
T Consensus 208 ----DI~APG~~I~St~~~~~-----------~~y~~~SGTSmAAP~VAG~aALlls~~P~ltp~qVr~~L~~tAt~~ 270 (546)
T 2qtw_B 208 ----DLFAPGEDIIGASSDCS-----------TCFVSQSGTSQAAAHVAGIAAMMLSAEPELTLAELRQRLIHFSAKD 270 (546)
T ss_dssp ----CEEEECSSEEEECTTST-----------TCEEEECSHHHHHHHHHHHHHHHHHHSTTCCHHHHHHHHHHTSEES
T ss_pred ----eEEecCccEEeeccCCC-----------CcEeeeCcCcHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHhcccc
Confidence 99999999999987642 2799999999999999999999999999999999999999999764
No 33
>2id4_A Kexin; KEX2, kexin, furin, proprotein, prohormone, convertase, SUBT like protease, serine protease; HET: NDG; 1.90A {Saccharomyces cerevisiae} SCOP: b.18.1.20 c.41.1.1 PDB: 1r64_A* 1ot5_A*
Probab=100.00 E-value=7.8e-46 Score=422.10 Aligned_cols=284 Identities=18% Similarity=0.214 Sum_probs=215.4
Q ss_pred ccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCCC
Q 047013 133 DSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSSF 212 (781)
Q Consensus 133 ~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~~ 212 (781)
..+|..+++|+||+|||||||||++||+|.++- ...+.++|.++ ..+
T Consensus 44 ~~aw~~g~tG~gv~VaViDtGvd~~Hpdl~~~~------------------------~~~~~~d~~~~------~~~--- 90 (503)
T 2id4_A 44 LDLWYNNITGAGVVAAIVDDGLDYENEDLKDNF------------------------CAEGSWDFNDN------TNL--- 90 (503)
T ss_dssp HHHHHTTCSCTTCEEEEEESCCCTTSTTTTTTB------------------------CGGGCEETTTT------BSC---
T ss_pred HHHHhcCCCCCCeEEEEEeCCCCCCChhHhhcc------------------------cccCcccCCCC------CCC---
Confidence 689999999999999999999999999998641 00122334322 000
Q ss_pred ccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhhc
Q 047013 213 LVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIHD 292 (781)
Q Consensus 213 ~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~~ 292 (781)
..+..|.+||||||||||||...++. .+.||||+|+|+.+|+++.. ++..++++||+|++++
T Consensus 91 -----~~p~~d~~gHGT~vAGiiaa~~~n~~--------~~~GvAp~a~i~~~rv~~~~-----~~~~~~~~ai~~a~~~ 152 (503)
T 2id4_A 91 -----PKPRLSDDYHGTRCAGEIAAKKGNNF--------CGVGVGYNAKISGIRILSGD-----ITTEDEAASLIYGLDV 152 (503)
T ss_dssp -----CCCCSTTTTHHHHHHHHHHCCSSSSS--------SCCCTTTTSEEEEEECTTSC-----CCHHHHHHHTTTTTTT
T ss_pred -----CCCCCCCCChHHHHHHHHHhccCCCC--------CcEEECCCCEEEEEEeeCCC-----CChHHHHHHHHhHhhc
Confidence 11335788999999999999753322 24799999999999999742 6788999999999999
Q ss_pred CCcEEEecCCCCCCC-C---CCChHHHHHHHHH-----hCCCEEEEecCCCCCCCC--CccC--CCCceEEecccCCcee
Q 047013 293 GVDIISASLGSKPKE-H---FESSVAVGSFHAM-----MHGILVVASAGNSGPAEK--TVDN--VPPWVLTVGASTTDRE 359 (781)
Q Consensus 293 g~dVIN~SlG~~~~~-~---~~~~~~~a~~~a~-----~~Gi~vV~AAGN~g~~~~--~~~~--~~p~vitVgA~~~d~~ 359 (781)
+ +|||||||..... . ....+..++.++. .+|++||+||||+|.... .++. ..+++|+|||++.+
T Consensus 153 ~-~Iin~S~G~~~~~~~~~~~~~~~~~a~~~a~~~~r~~~GvlvV~AAGN~g~~~~~~~~~~~~~~~~vI~VgA~~~~-- 229 (503)
T 2id4_A 153 N-DIYSCSWGPADDGRHLQGPSDLVKKALVKGVTEGRDSKGAIYVFASGNGGTRGDNCNYDGYTNSIYSITIGAIDHK-- 229 (503)
T ss_dssp C-SEEEECEESCCSSSCCBCCCHHHHHHHHHHHHHHHHHTCCEEEEECCSCGGGTCCGGGBTTTTCTTEEEEEEECTT--
T ss_pred C-CEEEeCCCcCCCCccccCchHHHHHHHHHHHHhcccCCCcEEEEecCCCCCcCCCCCCCcccCCCCEEEEEeeCCC--
Confidence 8 9999999986321 1 1233566666665 479999999999996432 2222 45789999985432
Q ss_pred eeeeEEeCCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHH
Q 047013 360 FSSYVTLGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRA 439 (781)
Q Consensus 360 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~ 439 (781)
T Consensus 230 -------------------------------------------------------------------------------- 229 (503)
T 2id4_A 230 -------------------------------------------------------------------------------- 229 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HhcCceEEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCC
Q 047013 440 AQAGAVGMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLI 519 (781)
Q Consensus 440 ~~~Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~ 519 (781)
+.++.||++||..
T Consensus 230 ------------------------------------------------------------------~~~a~~S~~g~~~- 242 (503)
T 2id4_A 230 ------------------------------------------------------------------DLHPPYSEGCSAV- 242 (503)
T ss_dssp ------------------------------------------------------------------SCCCTTCCCCTTE-
T ss_pred ------------------------------------------------------------------CCcCCcCCCCCcc-
Confidence 5778999999988
Q ss_pred CCCCccCeeee----CCCcEEeeecCCCCCCCCCCCCCcccceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHHHHh
Q 047013 520 DPAILKPDVIA----PGVDIIAAFTNEYGPSHEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSAIMT 595 (781)
Q Consensus 520 ~~~~~KPDI~A----PG~~I~sa~~~~~~~~~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~ 595 (781)
|++| ||..|+++...+ ..|..++|||||||||||++|||+|++|+|++++||++|++
T Consensus 243 -------~~~a~~~gpG~~I~st~~~~------------~~~~~~sGTS~AaP~VAG~aALl~~~~p~lt~~~v~~~L~~ 303 (503)
T 2id4_A 243 -------MAVTYSSGSGEYIHSSDING------------RCSNSHGGTSAAAPLAAGVYTLLLEANPNLTWRDVQYLSIL 303 (503)
T ss_dssp -------EEEEECSBTTBCEEEECSTT------------CEEEEECSHHHHHHHHHHHHHHHHHHCTTCCHHHHHHHHHH
T ss_pred -------eEeecCCCCCCceEeecCCC------------CceecCCCccccchhhhHHHHHHHHhCCCCCHHHHHHHHHh
Confidence 8887 899999995432 27999999999999999999999999999999999999999
Q ss_pred ccccCCCC-CCcccccCCCCCCCCCcccCCcccccccCCCCee
Q 047013 596 TATTEDSS-KHPILDQVTGQKATPFAYGAGHVNPNSALDPGLV 637 (781)
Q Consensus 596 TA~~~~~~-g~~~~~~~~~~~~~~~~~G~G~in~~~Av~~~l~ 637 (781)
||++++.. ...+.. ..........||+|+||+.+|++.+.-
T Consensus 304 tA~~~~~~~~~~~~~-~~~g~~~~~~~G~G~vda~~Av~~a~~ 345 (503)
T 2id4_A 304 SAVGLEKNADGDWRD-SAMGKKYSHRYGFGKIDAHKLIEMSKT 345 (503)
T ss_dssp HCBCCTTCGGGCCEE-CSSSSEEBTTTBTCBCCHHHHHHHHTS
T ss_pred ccccCCCCcCCCcee-cCCCCccCcccCCcEecHHHHHHHHhc
Confidence 99987543 111111 111122356899999999999996543
No 34
>3hjr_A Extracellular serine protease; kexin, hydrolase; 1.65A {Aeromonas sobria}
Probab=100.00 E-value=8.7e-44 Score=416.15 Aligned_cols=322 Identities=18% Similarity=0.173 Sum_probs=203.2
Q ss_pred CccccccCCCCCceEEEEecCCCCcCCCCccCCCCCCCCCCCcccccCCCCCccccCceeeeeEeccchhhhhhccCCCC
Q 047013 132 PDSAWNKARFGEDVIIGNLDSGVWPESQSFTDEGMGPIPDRWQGTCQNDTNKAITCNRKLIGIRYISEGLIESCRAMNSS 211 (781)
Q Consensus 132 ~~~~w~~~~~G~gv~VaVIDtGid~~Hp~f~~~~~~~~~~~~~g~~~~~~~~~~~~n~ki~g~~~~~~~~~~~~~~~~~~ 211 (781)
+..+|..+++|+||+|||||||||++||||.++ ...+.++|.++. .
T Consensus 59 v~~aw~~g~tG~GV~VaViDtGid~~HpDL~~n-------------------------~~~~~~~~~~~~------~--- 104 (600)
T 3hjr_A 59 LWWAHRTGVLGQGVNVAVVDDGLAIAHPDLADN-------------------------VRPGSKNVVTGS------D--- 104 (600)
T ss_dssp CHHHHHHTCSCTTCEEEEESSCCCTTCTTTGGG-------------------------BCSCCBCTTTSS------S---
T ss_pred HHHHHHcCCCCCCeEEEEEcCCCCCCChhHhhc-------------------------cccCcceeecCC------C---
Confidence 368999999999999999999999999999863 011222232221 0
Q ss_pred CccCCCCCCCCCCCCccccccccccccccccccccccCCccccccCCCceEeecccccCCCCCCCCChHHHHHHH-HHhh
Q 047013 212 FLVPENLTTSIDHNGHGTHTLSTAGGSFVSNVSLYGMGYGTAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGF-DVAI 290 (781)
Q Consensus 212 ~~~p~~~~~~~d~~gHGThVAGiiag~~~~~~~~~G~~~~~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai-~~a~ 290 (781)
+..+..|.+||||||||||||.. ++ .| +.||||+|+|+.+|++++.+ .+...+++.|+ +++.
T Consensus 105 -----dp~p~~~~~gHGThVAGiIAa~~-n~---~g-----~~GVAp~A~l~~~rvl~~~~---~~~~~~~~~a~~~~~~ 167 (600)
T 3hjr_A 105 -----DPTPTDPDTAHGTSVSGIIAAVD-NA---IG-----TKGIAPRAQLQGFNLLDDNS---QQLQKDWLYALGDSNA 167 (600)
T ss_dssp -----CCCCCSTTCCHHHHHHHHHHCCS-SS---SS-----CCCSSTTCEEEEECTTSTTC---CCCHHHHHHHTTSSHH
T ss_pred -----CCCCCCCCCChHHHHHHHHhEeC-CC---CC-----cEEeCCCCEEEEEEeecCCC---CccHHHHHHHhhhhhh
Confidence 01234467899999999999863 11 22 48999999999999998776 46677777776 5677
Q ss_pred hcCCcEEEecCCCCCC-CCCCCh-----HHHHHHHH--HhCCCEEEEecCCCCCCCCCccCCCCceEEecccCCceeeee
Q 047013 291 HDGVDIISASLGSKPK-EHFESS-----VAVGSFHA--MMHGILVVASAGNSGPAEKTVDNVPPWVLTVGASTTDREFSS 362 (781)
Q Consensus 291 ~~g~dVIN~SlG~~~~-~~~~~~-----~~~a~~~a--~~~Gi~vV~AAGN~g~~~~~~~~~~p~vitVgA~~~d~~~~~ 362 (781)
.++++|||+|||.... ....+. +..++..+ ..+|+++|+||||.+....... +.+.+.
T Consensus 168 ~~~~~I~n~S~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~AaGNg~~~~~~~~------~~~~~~-------- 233 (600)
T 3hjr_A 168 SRDNRVFNQSYGMSVVDPRSANSLDQSQLDRLFEQQTLKAQGAAYIKAAGNGFNKIAAGG------YVLNRT-------- 233 (600)
T ss_dssp HHTCSEEEECCCCCCSSCCCSCSHHHHHHHHHHHHHHHSTTCCEEEEECCSCSSEEEETT------EEEEEE--------
T ss_pred hcCCCEEecccCccccCCccCCcchhhhHHHHHHHhhhccCCcEEEEeccCccccccccc------cccccC--------
Confidence 8899999999997621 111122 12222222 2689999999999763210000 000000
Q ss_pred eEEeCCceEEeeeeeeccCCCCCcceeeEecccccccccCccccCCCCCCCCCCCCceeEEEEEecCCcchHHHHHHHhc
Q 047013 363 YVTLGNKMVIKGASIAEKGSLTQDFYPLIAGEAAKVANVSNEDATQCKNGTIDPEKVKGKILICYDAKIGDAKGQRAAQA 442 (781)
Q Consensus 363 ~~~~~~~~~~~g~~~~~~~~~~~~~~~lv~~~~~~~~~~~~~~~~~c~~~~~~~~~~~gkivl~~~g~~~~~~~~~~~~~ 442 (781)
+++ .......|..... ....
T Consensus 234 ----g~~--------------------------------~~~~~~~~~~d~~--~~~~---------------------- 253 (600)
T 3hjr_A 234 ----GNG--------------------------------PKLPFENSNLDPS--NSNF---------------------- 253 (600)
T ss_dssp ----SSC--------------------------------CCCCSSBTTSSGG--GGSS----------------------
T ss_pred ----CCC--------------------------------CCCCcccccccCc--cccC----------------------
Confidence 000 0000000100000 0000
Q ss_pred CceEEEEecCCCCccccccccccccEEEEehhhHHHHHHHHhcCCCcEEEEecceeeeccccCCccccccCCCCCCCCCC
Q 047013 443 GAVGMILANSREDQNISLNMVHFLPTAYVNYKDGQSVYAYIYNTENPVASMTNSITEFNKIWSRMTSFFSARGPNLIDPA 522 (781)
Q Consensus 443 Ga~g~i~~~~~~~~~~~~~~~~~~p~~~i~~~~g~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~a~fSs~Gp~~~~~~ 522 (781)
...++......+.++.||++|+..
T Consensus 254 ----------------------------------------------------~~IsVgA~~~~g~~a~yS~~G~~v---- 277 (600)
T 3hjr_A 254 ----------------------------------------------------WNLVVSALNADGVRSSYSSVGSNI---- 277 (600)
T ss_dssp ----------------------------------------------------SEEEEEEECTTSSBCTTCCBCTTC----
T ss_pred ----------------------------------------------------cceEEeeecCCCCEeecccCCcce----
Confidence 001122233357889999999988
Q ss_pred CccCeeeeCCCcE-------Eee-ecCCCCCC-------------CCCCCCCcccceeeccccchhhHHHHHHHHHHHhC
Q 047013 523 ILKPDVIAPGVDI-------IAA-FTNEYGPS-------------HEEFDPRRVPYNVMSGTSMACPHVAGIAGLVKTLH 581 (781)
Q Consensus 523 ~~KPDI~APG~~I-------~sa-~~~~~~~~-------------~~~~~~~~~~y~~~sGTSmAaP~VAG~aALl~q~~ 581 (781)
+++|||..+ ..+ .++..... ..........|..++|||||||||||++|||+|++
T Consensus 278 ----~~~apg~~~~~~~~~~vt~~~pG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sGTSmAaP~VAGvaALll~a~ 353 (600)
T 3hjr_A 278 ----FLSATGGEYGTDTPAMVTTDLPGCDMGYNRTDDPSTNRLHGNSQLDASCDYNGVMNGTSSATPSTSGAMALLMSAY 353 (600)
T ss_dssp ----CEEEECCSCSSSSCCEEEECCSSTTSSSSSTTSCCSSTTTTCTTTCTTCCEEEEECSHHHHHHHHHHHHHHHHHHS
T ss_pred ----eeccCCCCCCCCCcceeeecCCCccccccccCCccccccccccccCCCCCceeccccccccchhHHHHHHHHHHHC
Confidence 999999763 222 22110000 00111233468899999999999999999999999
Q ss_pred CCCCHHHHHHHHHhccccCCCCCCccccc-------------------CCCCCCCCCcccCCcccccccCCCCeee
Q 047013 582 PDWSPAAIKSAIMTTATTEDSSKHPILDQ-------------------VTGQKATPFAYGAGHVNPNSALDPGLVY 638 (781)
Q Consensus 582 p~lt~~~ik~~L~~TA~~~~~~g~~~~~~-------------------~~~~~~~~~~~G~G~in~~~Av~~~l~~ 638 (781)
|+|+++|||++|++||++++....|.... ..........||+|+||+.+||+.+..+
T Consensus 354 P~lt~~~v~~~L~~TA~~~d~~~~p~~~~~~~~~~~~~~~~~~~~w~~N~aG~~~s~~yGfG~vDA~~aV~~A~~w 429 (600)
T 3hjr_A 354 PDLSVRDLRDLLARSATRVDAKHQPVMVSYTSSTGKVRDVKGLEGWERNAAGMWFSPTYGFGLIDVNKALELAANH 429 (600)
T ss_dssp TTSCHHHHHHHHHHHCBCCSTTCCCEEEEEECTTSCEEEEEEECCSEECTTSCEEBTTTBTCBCCHHHHHHHHTTC
T ss_pred CCCCHHHHHHHHHhhCccCCCCCCcccccccccccccccccccCCcccccCCceEccccCCceecHHHHHHHhhcC
Confidence 99999999999999999998766553210 1111223457999999999999855433
No 35
>1t1e_A Kumamolisin; proenzyme, prosubtilase, activation mechanism, sedolisin, serine-carboxyl proteinase, hydrolase; 1.18A {Bacillus SP} SCOP: c.41.1.2 d.58.3.2 PDB: 1t1g_A 1t1i_A 1gt9_1 1gtg_1 1gtj_1* 1gtl_1* 1sio_A* 1sn7_A 1zvj_A 1siu_A 1zvk_A
Probab=99.91 E-value=3e-25 Score=253.05 Aligned_cols=97 Identities=25% Similarity=0.375 Sum_probs=76.6
Q ss_pred cccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhh---cCCcEEEecCCCCCCCC---CCChHHHHHHHHHhCCC
Q 047013 252 TAKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIH---DGVDIISASLGSKPKEH---FESSVAVGSFHAMMHGI 325 (781)
Q Consensus 252 ~~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~---~g~dVIN~SlG~~~~~~---~~~~~~~a~~~a~~~Gi 325 (781)
.+.||||+|+|+.|++. ...+.++++|+||++ ++++|||||||...... +...+..++.+|..+||
T Consensus 273 ~~~gvAp~a~i~~~~~~--------~~~~~~~~ai~~av~~~~~~~~VIS~S~G~~e~~~~~~~~~~~~~~~~~a~~~Gi 344 (552)
T 1t1e_A 273 VAGALAPGAKIAVYFAP--------NTDAGFLNAITTAVHDPTHKPSIVSISWGGPEDSWAPASIAAMNRAFLDAAALGV 344 (552)
T ss_dssp HHHHHCTTSEEEEEECC--------SSHHHHHHHHHHHHTCTTTCCSEEEECEEEEGGGSCHHHHHHHHHHHHHHHHTTC
T ss_pred hhhccCCCCeEEEEEcC--------CCCchHHHHHHHHHhcccCCCCEEEecccCCcccCCHHHHHHHHHHHHHHHhCCe
Confidence 45899999999999973 245689999999998 78999999999873211 12346667778889999
Q ss_pred EEEEecCCCCCCC--------CCccCCCCceEEecccCC
Q 047013 326 LVVASAGNSGPAE--------KTVDNVPPWVLTVGASTT 356 (781)
Q Consensus 326 ~vV~AAGN~g~~~--------~~~~~~~p~vitVgA~~~ 356 (781)
+||+||||+|... ..+++..|+|++||+++.
T Consensus 345 ~vv~AsGd~G~~~~~~~~~~~~~~PAs~P~V~aVGat~~ 383 (552)
T 1t1e_A 345 TVLAAAGDSGSTDGEQDGLYHVDFPAASPYVLACGGTRL 383 (552)
T ss_dssp EEEEECCSBGGGTTCCSSSCCCEETTTSTTSEEEEEEEE
T ss_pred EEEEecCCCCCCCCCCCCcccccCcccCCCEEEEecccc
Confidence 9999999999653 234457799999999754
No 36
>1ga6_A Serine-carboxyl proteinase; serine-carboxyl proteinase, hydrolase-hydrolase inhibitor CO; 1.00A {Pseudomonas SP} SCOP: c.41.1.2 PDB: 1ga4_A* 1ga1_A 1kdv_A* 1kdy_A* 1kdz_A* 1ke1_A* 1ke2_A* 1nlu_A*
Probab=99.85 E-value=8.4e-22 Score=214.08 Aligned_cols=100 Identities=17% Similarity=0.167 Sum_probs=78.7
Q ss_pred cccCCCceEeecccccCCCCCCCCChHHHHHHHHHhhh-cCCcEEEecCCCCCC----CCCCChHHHHHHHHHhCCCEEE
Q 047013 254 KGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAIH-DGVDIISASLGSKPK----EHFESSVAVGSFHAMMHGILVV 328 (781)
Q Consensus 254 ~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~~-~g~dVIN~SlG~~~~----~~~~~~~~~a~~~a~~~Gi~vV 328 (781)
..+||+++++.|++.+... +..++++++|+||++ ++++|||||||.... ..+...+..++.+|..+||+||
T Consensus 90 g~~aP~a~~~~~~~~~~~~----~~~~~~~~ai~~av~~~~~~ViS~S~G~~e~~~~~~~~~~~~~~~~~~a~~~Gitvv 165 (372)
T 1ga6_A 90 GSAGGAVQQLLFYMADQSA----SGNTGLTQAFNQAVSDNVAKVINVSLGWCEADANADGTLQAEDRIFATAAAQGQTFS 165 (372)
T ss_dssp HHTTSCEEEEEEEEECTTS----STTHHHHHHHHHHHHHCCCSEEEECCCEEHHHHHHTTHHHHHHHHHHHHHHTTCEEE
T ss_pred hhcCCCCcEEEEEeCCCCC----cccHHHHHHHHHHHhcCCCCEEEeCCCCCCCCCchHHHHHHHHHHHHHHHhCCcEEE
Confidence 4579999999999986543 667899999999997 899999999998621 1122456677778889999999
Q ss_pred EecCCCCCCCC-------------CccCCCCceEEecccCCc
Q 047013 329 ASAGNSGPAEK-------------TVDNVPPWVLTVGASTTD 357 (781)
Q Consensus 329 ~AAGN~g~~~~-------------~~~~~~p~vitVgA~~~d 357 (781)
+||||+|...+ .+++..|+|++||+++..
T Consensus 166 ~AsGd~G~~~~~~~g~~~~~~~~~~~PAs~P~V~aVGat~~~ 207 (372)
T 1ga6_A 166 VSSGDEGVYECNNRGYPDGSTYSVSWPASSPNVIAVGGTTLY 207 (372)
T ss_dssp EECCSBTTBTTTTTTCCCTTCCBCEETTTCTTSEEEEEEEEE
T ss_pred EEECCCCCccccccCccCCccCCcCCCCCCCCeEEEEeeecc
Confidence 99999997543 334567999999997643
No 37
>3edy_A Tripeptidyl-peptidase 1; protease, TPP1, sedolisin, batten disease, lincl, zymogen, P exopeptidase, endopeptidase, S53 family, CLN2; HET: NAG; 1.85A {Homo sapiens} PDB: 3ee6_A*
Probab=98.99 E-value=2.7e-10 Score=128.96 Aligned_cols=99 Identities=15% Similarity=0.187 Sum_probs=62.3
Q ss_pred ccccCCCceEeecccccCCCCCCCCChHHHHHHHHHhh--hcCCcEEEecCCCCCCCC---CCChHHHHHHHHHhCCCEE
Q 047013 253 AKGGSPKARLAAYKVCWKPNGANLCNAADIIAGFDVAI--HDGVDIISASLGSKPKEH---FESSVAVGSFHAMMHGILV 327 (781)
Q Consensus 253 ~~GvAP~A~l~~~kv~~~~~~~~~~~~~~i~~ai~~a~--~~g~dVIN~SlG~~~~~~---~~~~~~~a~~~a~~~Gi~v 327 (781)
+.+++++..++.|...+.. .....++..+++.. .+-++|||+|||...... +...+...+.++..+||.|
T Consensus 261 a~a~~~~i~~~~~~~~g~~-----~~~e~~l~~l~~l~~~~~~~~ViS~S~G~~e~~~~~~y~~~~~~~~~~~~~~Gitv 335 (544)
T 3edy_A 261 LMSAGANISTWVYSSPGRH-----EGQEPFLQWLMLLSNESALPHVHTVSYGDDEDSLSSAYIQRVNTELMKAAARGLTL 335 (544)
T ss_dssp HHHHSTTSEEEEECCCSCC-----TTCCHHHHHHHHHTTCSSCCSEEEEECCEEGGGSCHHHHHHHHHHHHHHHHTTCEE
T ss_pred HhccCCCceEEEEecCCcc-----cccccHHHHHHHHhccCCCCcEEEecCCCcccccCHHHHHHHHHHHHHHHhCCeEE
Confidence 3455566666555432211 12234444444433 346899999999873211 1233555666788999999
Q ss_pred EEecCCCCCCC----------CCccCCCCceEEecccCC
Q 047013 328 VASAGNSGPAE----------KTVDNVPPWVLTVGASTT 356 (781)
Q Consensus 328 V~AAGN~g~~~----------~~~~~~~p~vitVgA~~~ 356 (781)
++|+||+|... ..+++..|||++||+++.
T Consensus 336 ~~ASGD~G~~~~~~~~~~~~~~~~Pas~P~VtaVGgT~l 374 (544)
T 3edy_A 336 LFASGDSGAGCWSVSGRHQFRPTFPASSPYVTTVGGTSF 374 (544)
T ss_dssp EEECCSSTTBCEEETTEEECCCEETTTCTTSEEEEEEEE
T ss_pred EEecCCCCccccCCCCCccccCCCcCCCCcEEEEeeeec
Confidence 99999999642 134557799999999753
No 38
>2w2n_P Proprotein convertase subtilisin/kexin type 9; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2m_P 2w2o_P 2w2p_P 2w2q_P 2xtj_P
Probab=98.94 E-value=1.2e-09 Score=97.48 Aligned_cols=79 Identities=15% Similarity=0.143 Sum_probs=66.7
Q ss_pred cCCCcEEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHhCCchhccccEEEEeccceeeEEEEeCHHHHHHHhcCCCeEE
Q 047013 25 TAKKPYVVYLGSHSHGSNPTSHDINRARIKHHEFLGSFLGSVEEAAGLIFHSYGRYINGFGAVLEEEHAKQIARHPEVVS 104 (781)
Q Consensus 25 ~~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~s~~l~~~~i~~L~~~~~V~~ 104 (781)
...++|||+||+.... .....|.+|+.+++.+ +....++.+.|++.|+||+++++++++++|+++|+|.+
T Consensus 35 ~ip~~YIV~lk~~~~~---------~~~~~h~~~l~s~~~~-~~~~~~i~~sY~~~~~GFaa~Lt~~~~~~L~~~P~V~~ 104 (114)
T 2w2n_P 35 RLPGTYVVVLKEETHL---------SQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDY 104 (114)
T ss_dssp EEEEEEEEEECTTCCH---------HHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSSEEEEECCGGGHHHHHTSTTEEE
T ss_pred CCCCcEEEEECCCCCH---------HHHHHHHHHHHHHhhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCccE
Confidence 3457899999987653 4456888999887664 33467899999999999999999999999999999999
Q ss_pred EEEcceecc
Q 047013 105 VFLEEGIDL 113 (781)
Q Consensus 105 V~~~~~~~~ 113 (781)
|++++.++.
T Consensus 105 VE~D~~v~~ 113 (114)
T 2w2n_P 105 IEEDSSVFA 113 (114)
T ss_dssp EEEEEEEEE
T ss_pred EEeCceEec
Confidence 999998764
No 39
>3cnq_P Subtilisin BPN'; uncleaved, proenzyme, substrate complex, hydrolase, metal- binding, protease, secreted, serine protease, sporulation; 1.71A {Bacillus amyloliquefaciens} PDB: 3bgo_P 3co0_P 1spb_P 1scj_B
Probab=98.80 E-value=2.1e-08 Score=83.68 Aligned_cols=74 Identities=16% Similarity=0.268 Sum_probs=57.1
Q ss_pred cCCCcEEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHhCCchhccccEEEEeccceeeEEEEeCHHHHHHHhcCCCeEE
Q 047013 25 TAKKPYVVYLGSHSHGSNPTSHDINRARIKHHEFLGSFLGSVEEAAGLIFHSYGRYINGFGAVLEEEHAKQIARHPEVVS 104 (781)
Q Consensus 25 ~~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~s~~l~~~~i~~L~~~~~V~~ 104 (781)
...++|||.||+.... .. .+..+++ ....++.++|.+ |+||+++++++++++|+++|+|.+
T Consensus 6 ~i~~~YIV~~k~~~~~--------~~---~~~~~~~-------~~g~~i~~~y~~-~~Gfaa~l~~~~~~~L~~~p~V~~ 66 (80)
T 3cnq_P 6 NGEKKYIVGFKQGFKS--------CA---KKEDVIS-------EKGGKLQKCFKY-VDAASATLNEKAVEELKKDPSVAY 66 (80)
T ss_dssp --CCEEEEEECTTCCS--------HH---HHHHHHH-------TTTCEEEEECSS-SSEEEEECCHHHHHHHHTCTTEEE
T ss_pred cCCCCEEEEECCCCCh--------HH---HHHHHHH-------HcCCcceEEEcc-cEEEEEEcCHHHHHHHHhCCCccE
Confidence 3468999999998764 11 1222222 123689999998 999999999999999999999999
Q ss_pred EEEcceecccccC
Q 047013 105 VFLEEGIDLHTTR 117 (781)
Q Consensus 105 V~~~~~~~~~~~~ 117 (781)
||++..++++++.
T Consensus 67 Ve~D~~v~~~tt~ 79 (80)
T 3cnq_P 67 VEEDKLYRALSAT 79 (80)
T ss_dssp EEECCEEEECCC-
T ss_pred EEeCcEEEEeeec
Confidence 9999999987653
No 40
>2qtw_A Proprotein convertase subtilisin/kexin type 9 Pro; coronary heart disease, hypercholest low density lipoprotein receptor, autocatalytic cleavage; HET: NAG; 1.90A {Homo sapiens} PDB: 3m0c_A 2pmw_A 3h42_A 3bps_P 3gcw_P 3gcx_P 3p5b_P 3p5c_P
Probab=98.63 E-value=5.2e-08 Score=87.92 Aligned_cols=78 Identities=15% Similarity=0.145 Sum_probs=60.8
Q ss_pred CCCcEEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHhCCchhccccEEEEeccceeeEEEEeCHHHHHHHhcCCCeEEE
Q 047013 26 AKKPYVVYLGSHSHGSNPTSHDINRARIKHHEFLGSFLGSVEEAAGLIFHSYGRYINGFGAVLEEEHAKQIARHPEVVSV 105 (781)
Q Consensus 26 ~~~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y~~~~~g~s~~l~~~~i~~L~~~~~V~~V 105 (781)
..++|||+||+.... .....+.+++..+... +....++.+.|++.|+||+++++++++++|+++|+|.+|
T Consensus 46 Ip~~YIV~~K~~~~~---------~~~~~~~~~l~~~~~~-r~~g~~i~~~Y~~~~~GFaa~l~~~~~~~L~~~p~V~~V 115 (124)
T 2qtw_A 46 LPGTYVVVLKEETHL---------SQSERTARRLQAQAAR-RGYLTKILHVFHGLLPGFLVKMSGDLLELALKLPHVDYI 115 (124)
T ss_dssp EEEEEEEEECTTCCH---------HHHHHHHHHHHHHHHH-TTCCCEEEEEECSSSCEEEEECCGGGHHHHHTSTTEEEE
T ss_pred CCCCEEEEECCCCCH---------HHHHHHHHHHHHHHhh-cccCCceEEEecccceEEEEEcCHHHHHHHHcCCCCcEE
Confidence 457899999998753 3344555555553221 113468999999999999999999999999999999999
Q ss_pred EEcceecc
Q 047013 106 FLEEGIDL 113 (781)
Q Consensus 106 ~~~~~~~~ 113 (781)
+++..++.
T Consensus 116 E~D~~v~a 123 (124)
T 2qtw_A 116 EEDSSVFA 123 (124)
T ss_dssp EEEEEEEE
T ss_pred EeCceEec
Confidence 99988764
No 41
>1v5i_B POIA1, IA-1=serine proteinase inhibitor; protease-inhibitor complex, subtilisin, hydrolase-Pro binding complex; 1.50A {Pleurotus ostreatus} SCOP: d.58.3.2 PDB: 1itp_A
Probab=98.62 E-value=1.1e-07 Score=78.28 Aligned_cols=70 Identities=11% Similarity=0.096 Sum_probs=58.1
Q ss_pred CcEEEEeCCCCCCCCCCCCCchhhHHHHHHHHHHHhCCchhccccEEEEe-ccceeeEEEEeCHHHHHHHhcC--CCeEE
Q 047013 28 KPYVVYLGSHSHGSNPTSHDINRARIKHHEFLGSFLGSVEEAAGLIFHSY-GRYINGFGAVLEEEHAKQIARH--PEVVS 104 (781)
Q Consensus 28 ~~yIV~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~y-~~~~~g~s~~l~~~~i~~L~~~--~~V~~ 104 (781)
+.|||.||+.... ...+.+.+++... ..++.+.| ...|+||+++++++.+++|+++ |.|.+
T Consensus 3 ~sYIV~lk~~~~~---------~~~~~~~~~~~~~-------gg~i~~~y~~~~~~Gfa~~~~~~~l~~l~~~~~p~V~~ 66 (76)
T 1v5i_B 3 GKFIVIFKNDVSE---------DKIRETKDEVIAE-------GGTITNEYNMPGMKGFAGELTPQSLTKFQGLQGDLIDS 66 (76)
T ss_dssp EEEEEEECTTCCH---------HHHHHHHHHHHHH-------TCCCCEEEEETTEEEEEEEECHHHHHHHHHTBTTTEEE
T ss_pred ceEEEEECCCCCH---------HHHHHHHHHHHhh-------CCceEEEEEcCceeEEEEEcCHHHHHHHHhcCCCCCcE
Confidence 6899999998763 4556666776654 24688999 4799999999999999999999 88999
Q ss_pred EEEcceecc
Q 047013 105 VFLEEGIDL 113 (781)
Q Consensus 105 V~~~~~~~~ 113 (781)
||+++.++.
T Consensus 67 VE~D~~v~~ 75 (76)
T 1v5i_B 67 IEEDHVAHA 75 (76)
T ss_dssp EEECCEEEC
T ss_pred EcCCcEEeC
Confidence 999988764
No 42
>3icu_A E3 ubiquitin-protein ligase RNF128; E3 ligase, energy, PA domain, transmembrane,protein turnover conjugation pathway; HET: NAG; 2.10A {Homo sapiens}
Probab=98.51 E-value=5.1e-07 Score=87.42 Aligned_cols=93 Identities=12% Similarity=0.011 Sum_probs=73.9
Q ss_pred ccCCCCCCCCCCCC-------ceeEEEEEecCC--cchHHHHHHHhcCceEEEEecCCCCcccc--c--cccccccEEEE
Q 047013 405 DATQCKNGTIDPEK-------VKGKILICYDAK--IGDAKGQRAAQAGAVGMILANSREDQNIS--L--NMVHFLPTAYV 471 (781)
Q Consensus 405 ~~~~c~~~~~~~~~-------~~gkivl~~~g~--~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~--~--~~~~~~p~~~i 471 (781)
....|.+..+.... .+|||+|++||. +|.+|..+|+++||.++|+||+...+... . .....||+++|
T Consensus 82 ~~~GC~~~~~~~~~~~~~~~~~~gkIaLV~RG~~CsF~~Kv~nAq~aGA~avIIyNn~~~g~~~~~m~~~~~~~IPsv~I 161 (194)
T 3icu_A 82 ALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFADKIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMI 161 (194)
T ss_dssp CTTCCSTTCCBCCCBCTTSSCBCCEEEEEESCTTCCHHHHHHHHHHTTCSEEEEECCTTCTTCCCCCCCTTCCSSEEEEE
T ss_pred CcCCCCCCccccCCcccccccCCCeEEEEECCCCcCHHHHHHHHHHCCCcEEEEEeCCCCCCceeeecCCCCCceeEEEE
Confidence 46789887654322 579999999997 99999999999999999999985322211 1 12247999999
Q ss_pred ehhhHHHHHHHHhcCCCcEEEEecce
Q 047013 472 NYKDGQSVYAYIYNTENPVASMTNSI 497 (781)
Q Consensus 472 ~~~~g~~l~~~~~~~~~~~~~i~~~~ 497 (781)
+..+|+.|++++.++...+++|....
T Consensus 162 s~~~G~~L~~~L~~G~~Vtvti~vg~ 187 (194)
T 3icu_A 162 GNLKGTKILQSIQRGIQVTMVIEVGK 187 (194)
T ss_dssp CHHHHHHHHHHHHTTCCEEEEEEEEE
T ss_pred CHHHHHHHHHHHHCCCeEEEEEECCC
Confidence 99999999999999998888886553
No 43
>2z30_B TK-subtilisin; thermococcus kodakaraensis, hydrolase; 1.65A {Thermococcus kodakarensis} PDB: 2z2y_B 3a3p_B 2z56_B 2z58_B 2z57_B 3a3n_B 3a3o_B
Probab=97.46 E-value=0.00025 Score=55.99 Aligned_cols=46 Identities=15% Similarity=0.165 Sum_probs=41.0
Q ss_pred hhccccEEEEeccceeeEEEEeCHHHHHHHhcCCCeEEEEEcceecc
Q 047013 67 EEAAGLIFHSYGRYINGFGAVLEEEHAKQIARHPEVVSVFLEEGIDL 113 (781)
Q Consensus 67 ~~~~~~i~~~y~~~~~g~s~~l~~~~i~~L~~~~~V~~V~~~~~~~~ 113 (781)
...+.++.++|. .+++++++|+++.++.|+++|+|++|++|...+.
T Consensus 19 ~~~gG~i~~~~~-~I~a~~~~lp~~~~~~L~~~p~V~yVE~D~~v~a 64 (65)
T 2z30_B 19 LGIGGHIVYQFK-LIPAVVVDVPANAVGKLKKMPGVEKVEFDHQAVL 64 (65)
T ss_dssp GGGTCEEEEECS-SSSEEEEEECGGGHHHHHTSTTEEEEEECCEEEE
T ss_pred HHCCCEEEEEec-CCcEEEEEeCHHHHHHHhcCCCceEEecCcEEEc
Confidence 344678999998 9999999999999999999999999999987653
No 44
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=96.31 E-value=0.008 Score=66.23 Aligned_cols=73 Identities=19% Similarity=0.279 Sum_probs=58.9
Q ss_pred CCCCCCCceeEEEEEecCC-cchHHHHHHHhcCceEEEEecCCCCcccc-c--cccccccEEEEehhhHHHHHHHHh
Q 047013 412 GTIDPEKVKGKILICYDAK-IGDAKGQRAAQAGAVGMILANSREDQNIS-L--NMVHFLPTAYVNYKDGQSVYAYIY 484 (781)
Q Consensus 412 ~~~~~~~~~gkivl~~~g~-~~~~~~~~~~~~Ga~g~i~~~~~~~~~~~-~--~~~~~~p~~~i~~~~g~~l~~~~~ 484 (781)
.++...+++|||+|+.+|. .|..|..+|+++||.|+|++++..+.... . .....+|+..|+.++++.|++++.
T Consensus 106 ~D~~~~dv~GkIvlv~~g~~~~~~k~~~A~~~GA~gvIi~~~~~~~~~g~~~~~~~~~IP~~~Is~~~a~~L~~~l~ 182 (421)
T 2ek8_A 106 ADVAGKDLNGKIALIQRGNISFADKVRNAAKQGAKAVIIYNNTDGKLNGTLGGSDASFVAAVGITKQEGDALAANLR 182 (421)
T ss_dssp TTTTTSCCTTSEEEEECCSSCHHHHHHHHHHTTCSEEEEECSSSSCCCCBCSSCCTTCCEEEEECHHHHHHHHHHHH
T ss_pred hhcCCCCcCceEEEEeCCCCCHHHHHHHHHHCCCeEEEEEeCCCcccccccCCCCCCCccEEEeCHHHHHHHHHHhh
Confidence 3444558999999999999 89999999999999999999986432111 1 124579999999999999999984
No 45
>2ys4_A Hydrocephalus-inducing protein homolog; hydin, PAPD-like, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=96.00 E-value=0.031 Score=49.95 Aligned_cols=80 Identities=15% Similarity=0.218 Sum_probs=57.3
Q ss_pred EEEecCC-CCcEEEEEEEEecCCCCeeEEEEEecCCceEEEEeecEEEEcCCCcEEEEEEEEEeecCCCCCCCceEEEEE
Q 047013 685 IAVPNLV-NGSMTVSRRLKNVGTPTCTYKAQITEIVGVSAVVEPITLNFTKYGEELTFKITFSVKGNDKPVATDYVFGEL 763 (781)
Q Consensus 685 ~~~~~~~-~~~~~~~~tv~n~~~~~~~y~~~~~~~~~~~v~~~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~G~i 763 (781)
+.++.+. +.+.+.+++|+|+|..+..|++....+ ++++|+.-++ .+|++.+++|+|.+. ....+++.+
T Consensus 32 l~fg~~~v~~~~~~~~~l~N~g~~~~~f~~~~~~~----F~i~P~~g~L-~pg~~~~i~V~F~P~------~~g~~~~~l 100 (122)
T 2ys4_A 32 LNFSTCPVKYSTQKILLVRNIGNKNAVFHIKTCRP----FSIEPAIGTL-NVGESMQLEVEFEPQ------SVGDHSGRL 100 (122)
T ss_dssp ECCCSEESSSCEEEEEEEECCSSSCEEEEEECCTT----EEEESSEEEE-CTTCEEEEEEEECCS------SSBCCCCBC
T ss_pred eecCCeecCCeEEEEEEEEECCCCCEEEEEecCCC----eEEECCcCEE-CCCCEEEEEEEEEcC------CCccEEEEE
Confidence 4444333 478899999999999999998876543 7778999999 799999999999982 333346665
Q ss_pred EEE-cCcceEEEE
Q 047013 764 VWS-DGFHNVKST 775 (781)
Q Consensus 764 ~~~-~~~~~v~~P 775 (781)
.+. ++...+.++
T Consensus 101 ~v~~~~g~~~~v~ 113 (122)
T 2ys4_A 101 IVCYDTGEKVFVS 113 (122)
T ss_dssp EEEESSSCEECCE
T ss_pred EEEECCCCEEEEE
Confidence 553 444444443
No 46
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=95.38 E-value=0.037 Score=61.22 Aligned_cols=81 Identities=21% Similarity=0.239 Sum_probs=59.8
Q ss_pred CCCceeEEEEEecCC-c---------chHH----HHHHHhcCceEEEEecCCCCccc--------cccccccccEEEEeh
Q 047013 416 PEKVKGKILICYDAK-I---------GDAK----GQRAAQAGAVGMILANSREDQNI--------SLNMVHFLPTAYVNY 473 (781)
Q Consensus 416 ~~~~~gkivl~~~g~-~---------~~~~----~~~~~~~Ga~g~i~~~~~~~~~~--------~~~~~~~~p~~~i~~ 473 (781)
..+++|||||+.++. . +..| ..+|.++||.|+|++++...... .......+|++.|+.
T Consensus 124 ~~dvkGKIVlv~~~~~~~~~~~~y~~~~~kr~~~a~~A~~aGA~avIi~~~~~~~~~~~~tg~~~~~~~~~~IP~~~Is~ 203 (444)
T 3iib_A 124 AGSLNDKIAFIDAKTERHRDGKGYGQTASGRSRGAVAAAEKGAVGIIIRSIGTDHDRMAHTGMMRYEEGVTAIPAAAISN 203 (444)
T ss_dssp TTTTTTCEEEECCCCCCCTTCHHHHHHHHHHHHHHHHHHHTTCSEEEEECSCSCCSSCCCCCBCCCCTTSCCCCEEEECH
T ss_pred ccccCccEEEEeCCCCCCcccccccchhhhhhhHHHHHHHCCCeEEEEEccCCcccccccCCccccCCCCCCCCeEEecH
Confidence 468999999999875 2 2333 45799999999999997543211 111235799999999
Q ss_pred hhHHHHHHHHhcCCCcEEEEecc
Q 047013 474 KDGQSVYAYIYNTENPVASMTNS 496 (781)
Q Consensus 474 ~~g~~l~~~~~~~~~~~~~i~~~ 496 (781)
++++.|++.+..+...++++...
T Consensus 204 ~da~~L~~~l~~g~~~~v~l~~~ 226 (444)
T 3iib_A 204 PDADLINAMLKRDKEVVISLELG 226 (444)
T ss_dssp HHHHHHHHHHTTTCCCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCeEEEEEEe
Confidence 99999999998877666666543
No 47
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=94.93 E-value=0.021 Score=66.58 Aligned_cols=70 Identities=27% Similarity=0.420 Sum_probs=55.2
Q ss_pred CCCceeEEEEEecCC-cchHHHHHHHhcCceEEEEecCCCC----c------------------cc----cccc------
Q 047013 416 PEKVKGKILICYDAK-IGDAKGQRAAQAGAVGMILANSRED----Q------------------NI----SLNM------ 462 (781)
Q Consensus 416 ~~~~~gkivl~~~g~-~~~~~~~~~~~~Ga~g~i~~~~~~~----~------------------~~----~~~~------ 462 (781)
..+++|||+|+++|. .+.+|..+|+++||.|+|+|++... + .- ..++
T Consensus 150 ~~~v~GkIvlv~~G~~~~~~Kv~~A~~~GA~gviiy~dp~d~~~~g~~~yP~~~~~p~~~vqrGsv~~~~~~GDp~TPG~ 229 (707)
T 3fed_A 150 GINCTGKIVIARYGKIFRGNKVKNAMLAGAIGIILYSDPADYFAPEVQPYPKGWNLPGTAAQRGNVLNLNGAGDPLTPGY 229 (707)
T ss_dssp CCCCTTCEEEEECCSSCHHHHHHHHHHTTCSEEEEECCHHHHCCTTCCBTTTSSBCCTTCCCCCCCCCCTTCCSTTCTTS
T ss_pred CCCCCCeEEEEECCCCCHhHHHHHHHHCCCEEEEEEcCchhccccccccCCCCccCCCccccccceecccCCCCCCCCCC
Confidence 457999999999999 9999999999999999999986210 0 00 0011
Q ss_pred ----------------cccccEEEEehhhHHHHHHHHhc
Q 047013 463 ----------------VHFLPTAYVNYKDGQSVYAYIYN 485 (781)
Q Consensus 463 ----------------~~~~p~~~i~~~~g~~l~~~~~~ 485 (781)
...||+..|+.++++.|++.+..
T Consensus 230 ps~~~~~r~~~~~~~~~p~IP~~pIS~~da~~Ll~~l~g 268 (707)
T 3fed_A 230 PAKEYTFRLDVEEGVGIPRIPVHPIGYNDAEILLRYLGG 268 (707)
T ss_dssp CCCTTCCCCCGGGCTTCCSSCEEEECHHHHHHHHHTBCB
T ss_pred cccCCCcccChhhccCCCCCCeEecCHHHHHHHHHHhcC
Confidence 13689999999999999987754
No 48
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=94.39 E-value=0.037 Score=63.76 Aligned_cols=68 Identities=15% Similarity=0.182 Sum_probs=53.8
Q ss_pred CCceeEEEEEecCC-cchHHHHHHHhcCceEEEEecCCCCcc------------------cc-cc---------------
Q 047013 417 EKVKGKILICYDAK-IGDAKGQRAAQAGAVGMILANSREDQN------------------IS-LN--------------- 461 (781)
Q Consensus 417 ~~~~gkivl~~~g~-~~~~~~~~~~~~Ga~g~i~~~~~~~~~------------------~~-~~--------------- 461 (781)
.+++|||+|+.+|. .+.+|..+|+++||.|+|+|++..... .. ++
T Consensus 128 vdv~GkIvlv~~g~~~~~~K~~~A~~~GA~gvii~~~~~~~~~~~~~~~~~G~~~~~~Gdp~tpg~ps~~~~~~~~~~~~ 207 (640)
T 3kas_A 128 TPVNGSIVIVRAGKITFAEKVANAESLNAIGVLIYMDQTKFPIVNAELSFFGHAHLGTGDPYTPGFPSFNHTQFPPSRSS 207 (640)
T ss_dssp SCCTTSEEEEESCSSCHHHHHHHHHTTTCSEEEEECCTTTCCCSCTTCCCCEECCSSSSCSCCCSSCC---CCCCCCSSC
T ss_pred cccCCcEEEEecCCCCHHHHHHHHHHCCCeEEEEEeccccccccccccccccccccCCCCCCCCCccccccccccccccc
Confidence 47999999999999 999999999999999999999753210 00 00
Q ss_pred ccccccEEEEehhhHHHHHHHHh
Q 047013 462 MVHFLPTAYVNYKDGQSVYAYIY 484 (781)
Q Consensus 462 ~~~~~p~~~i~~~~g~~l~~~~~ 484 (781)
....||+..|+.++++.|++.+.
T Consensus 208 ~~p~IP~~~Is~~~a~~Ll~~l~ 230 (640)
T 3kas_A 208 GLPNIPVQTISRAAAEKLFGNME 230 (640)
T ss_dssp CCCSSCEEECCHHHHHHHHTTEE
T ss_pred CCCCCCEEecCHHHHHHHHHHcc
Confidence 01258999999999999987654
No 49
>3qbt_B Inositol polyphosphate 5-phosphatase OCRL-1; protein transport, vesicular trafficking, GTPase, LOWE syndr immunoglobulin fold, RAB8A, endocytosis; HET: GNP; 2.00A {Homo sapiens}
Probab=91.53 E-value=1.4 Score=39.97 Aligned_cols=96 Identities=15% Similarity=0.070 Sum_probs=65.3
Q ss_pred eEEEecCC-CCcEEEEEEEEecCCCCeeEEEEEecC----CceEEEEeecEEEEcCCCcEEEEEEEEEeecC--CCCCCC
Q 047013 684 SIAVPNLV-NGSMTVSRRLKNVGTPTCTYKAQITEI----VGVSAVVEPITLNFTKYGEELTFKITFSVKGN--DKPVAT 756 (781)
Q Consensus 684 s~~~~~~~-~~~~~~~~tv~n~~~~~~~y~~~~~~~----~~~~v~~~p~~~~~~~~g~~~~~~vt~~~~~~--~~~~~~ 756 (781)
.|.+++.. ....+.+++|+|+|..+.+|++..... ..--++++|..-++ .+|++.+++|++.+++. .....+
T Consensus 33 ~ldFG~v~~~~~~~~~l~I~Ntg~vpa~F~f~~~~~~~~~~~~wl~v~P~~G~L-~Pge~~~I~v~~~v~~~~~~~ln~g 111 (140)
T 3qbt_B 33 EFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNSG 111 (140)
T ss_dssp EEEEEEECBTCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCHHHHHHHHHS
T ss_pred eEEeeeceeeeeeeeEEEEEcCCccceEEEEecCCCchhhhhHhhhcCCccccc-CCCCeeEEEEEEEEccCcccccccc
Confidence 44555444 467788899999999999999985421 12236778999899 89999999999997420 000011
Q ss_pred -ceEEEEEEEE-cCcceEEEEEEEEe
Q 047013 757 -DYVFGELVWS-DGFHNVKSTIAVKL 780 (781)
Q Consensus 757 -~~~~G~i~~~-~~~~~v~~P~~~~~ 780 (781)
.-++--|++. .++....||+...+
T Consensus 112 ~~~l~diLvL~Ve~G~d~fI~v~g~~ 137 (140)
T 3qbt_B 112 EDKIEDILVLHLDRGKDYFLTISGNY 137 (140)
T ss_dssp SSCSCEEEEEEETTSCEEEEEEEEEE
T ss_pred hhhhheeEEEEeecCCcEEEEEeccc
Confidence 2345667764 56788888886544
No 50
>2e6j_A Hydin protein; PAPD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.44 E-value=0.26 Score=42.88 Aligned_cols=67 Identities=16% Similarity=0.235 Sum_probs=49.5
Q ss_pred CCCCeEEEecCC-CCcEEEEEEEEecCCCCeeEEEEEec-CCceEEEEeecEEEEcCCCcEEEEEEEEEe
Q 047013 680 FNYPSIAVPNLV-NGSMTVSRRLKNVGTPTCTYKAQITE-IVGVSAVVEPITLNFTKYGEELTFKITFSV 747 (781)
Q Consensus 680 ln~ps~~~~~~~-~~~~~~~~tv~n~~~~~~~y~~~~~~-~~~~~v~~~p~~~~~~~~g~~~~~~vt~~~ 747 (781)
++...+.++... +...+.+++++|.|+.+..|++.... ..+...+++|..-.+ .+|++.+++|+|.+
T Consensus 12 ~~~~~ldFG~v~~g~~~~~~~~l~N~g~~p~~~~~~~~~~~~~~~f~v~p~~g~i-~pg~~~~i~V~f~~ 80 (112)
T 2e6j_A 12 FNFELLDIGKVFTGSAHCYEAILYNKGSIDALFNMTPPTSALGACFVFSPKEGII-EPSGVQAIQISFSS 80 (112)
T ss_dssp ESCSEEEEEEEESSCCEEEEEEEEECCSSCEEEEECCCSSHHHHHCEEESSEEEE-CTTBCCEEEEEECC
T ss_pred ECcccEecEeEEECCEEEEEEEEEECCcceEEEEEecCCccccCcEEEECCcCEE-CCCCEEEEEEEEEC
Confidence 333455555444 35678889999999999999984321 123447778999888 78999999999998
No 51
>1y9z_A Alkaline serine protease; subtilisin-like alpha/beta domain, insert beta barrel domain hydrolase; HET: PMS; 1.40A {Pseudoalteromonas SP} PDB: 1v6c_A* 1wvm_A*
Probab=89.07 E-value=0.26 Score=54.34 Aligned_cols=37 Identities=16% Similarity=0.136 Sum_probs=30.2
Q ss_pred eeeccccCCccccccCCCCCCCCCCCccCeeeeCCCcEEeeecCC
Q 047013 498 TEFNKIWSRMTSFFSARGPNLIDPAILKPDVIAPGVDIIAAFTNE 542 (781)
Q Consensus 498 ~~~~~~~~~~~a~fSs~Gp~~~~~~~~KPDI~APG~~I~sa~~~~ 542 (781)
++...+..+.++.||++||.+ ||+|||++|+++++.+
T Consensus 176 ~VgA~~~~~~~~~~S~~g~~v--------dv~ApG~~i~s~~~~g 212 (441)
T 1y9z_A 176 SVAAVDSNLDHAAFSQYTDQV--------EISGPGEAILSTVTVG 212 (441)
T ss_dssp EEEEECTTCCBCTTSCCCTTE--------EEEEECSSEEEECSTT
T ss_pred EEEEECCCCCCCccccCCCce--------EEEeccCCeeccccCC
Confidence 344455568899999999876 9999999999998753
No 52
>3lxu_X Tripeptidyl-peptidase 2; spindle complex, aminopeptidase, hydrolase, phosphoprotein, protease; 3.14A {Drosophila melanogaster}
Probab=86.98 E-value=0.43 Score=58.68 Aligned_cols=25 Identities=36% Similarity=0.468 Sum_probs=23.1
Q ss_pred CCCCCceEEEEecCCCCcCCCCccC
Q 047013 139 ARFGEDVIIGNLDSGVWPESQSFTD 163 (781)
Q Consensus 139 ~~~G~gv~VaVIDtGid~~Hp~f~~ 163 (781)
.+.|+||+|||+|||||+.+|-|.-
T Consensus 32 ~ydGrgv~iai~DtGVDP~a~glq~ 56 (1354)
T 3lxu_X 32 EYDGRDVTIAIFDSGVDPRATGLET 56 (1354)
T ss_dssp TCSSTTCEEEEEESCCCTTSTTSSC
T ss_pred CCCCCccEEEEEeCCCCCCCCccee
Confidence 6799999999999999999999963
No 53
>2r39_A FIXG-related protein; structural GE PSI-2, protein structure initiative, midwest center for STR genomics, MCSG, iron, iron-sulfur; 2.02A {Vibrio parahaemolyticus}
Probab=83.77 E-value=4 Score=35.74 Aligned_cols=53 Identities=17% Similarity=0.199 Sum_probs=44.0
Q ss_pred cEEEEEEEEecCCCCeeEEEEEecCCceEEEEeecEEEEcCCCcEEEEEEEEEee
Q 047013 694 SMTVSRRLKNVGTPTCTYKAQITEIVGVSAVVEPITLNFTKYGEELTFKITFSVK 748 (781)
Q Consensus 694 ~~~~~~tv~n~~~~~~~y~~~~~~~~~~~v~~~p~~~~~~~~g~~~~~~vt~~~~ 748 (781)
.-..++.|.|....+.+|.++++..+++++.- +..+++ ++||..++.|.+.+.
T Consensus 32 ~N~Ytlki~Nkt~~~~~~~l~v~g~~~l~~~g-~~~i~v-~~g~~~~~~v~v~~~ 84 (118)
T 2r39_A 32 ENTYTLKVINKTQQVQEYNLDVKGLNDVSWYG-KQTIQV-EPGEVLNLPMSLGAD 84 (118)
T ss_dssp EEEEEEEEEECSSSCEEEEEEEESCSSCEEES-CCEEEE-CTTCEEEEEEEEEEC
T ss_pred EEEEEEEEEECCCCCEEEEEEEeCCcccEEeC-CCcEEE-CCCCEEEEEEEEEEC
Confidence 56788999999999999999999876765542 456888 899999999999984
No 54
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=83.66 E-value=6.9 Score=38.30 Aligned_cols=75 Identities=12% Similarity=0.051 Sum_probs=50.5
Q ss_pred EEEecCC-CCcEEEEEEEEecCCCCeeEEEEEecCCceEEEEeecEEEEcCCCcEEEEEEEEEeecCCCCCCCceEEEEE
Q 047013 685 IAVPNLV-NGSMTVSRRLKNVGTPTCTYKAQITEIVGVSAVVEPITLNFTKYGEELTFKITFSVKGNDKPVATDYVFGEL 763 (781)
Q Consensus 685 ~~~~~~~-~~~~~~~~tv~n~~~~~~~y~~~~~~~~~~~v~~~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~~~~G~i 763 (781)
+.++... +...+.+++++|.|+.+.+++.... |.-.++..+|. ++ .+|++.+++|++.. .....-+...+.|
T Consensus 10 idFg~v~~g~~~~~~~~i~N~g~~pl~i~~~~~-p~~~~~~~~~~--~I-~PG~~g~I~vt~~~---~~~~~~G~~~~~i 82 (220)
T 2qsv_A 10 LLFPISMPEDEGVVRLVVNNTDESDLQVAVVSL-PSFVSLDDRAF--RL-QAREPRELNLSLAV---PRNMPPGMKDEPL 82 (220)
T ss_dssp EECCSBCTTCCCEEEEEEEECSSSCEEEEEEEC-CTTEECSCCEE--EE-CSSSCEEEEEEECC---CTTCCSEEEEEEE
T ss_pred eEcccccCCCcceEEEEEEeCCCCceEEEeccC-CCceEeeeCcc--ee-CCCCceEEEEEEcc---hhcccCCceeeEE
Confidence 3344443 3567789999999999998887543 55555444444 44 78999999999988 3443345567777
Q ss_pred EEE
Q 047013 764 VWS 766 (781)
Q Consensus 764 ~~~ 766 (781)
++.
T Consensus 83 ~v~ 85 (220)
T 2qsv_A 83 VLE 85 (220)
T ss_dssp EEE
T ss_pred EEE
Confidence 764
No 55
>3qis_A Inositol polyphosphate 5-phosphatase OCRL-1; DENT disease, RAC1, RAB gtpases, APPL1, endocytic PATH golgi complex, hydrolase-protein binding complex; 2.30A {Homo sapiens} PDB: 2qv2_A
Probab=82.58 E-value=10 Score=40.27 Aligned_cols=96 Identities=15% Similarity=0.089 Sum_probs=62.6
Q ss_pred CeEEEecCC-CCcEEEEEEEEecCCCCeeEEEEEecCCceE----EEEeecEEEEcCCCcEEEEEEEEEeecCC-CCCC-
Q 047013 683 PSIAVPNLV-NGSMTVSRRLKNVGTPTCTYKAQITEIVGVS----AVVEPITLNFTKYGEELTFKITFSVKGND-KPVA- 755 (781)
Q Consensus 683 ps~~~~~~~-~~~~~~~~tv~n~~~~~~~y~~~~~~~~~~~----v~~~p~~~~~~~~g~~~~~~vt~~~~~~~-~~~~- 755 (781)
..|.+++.. ....+-++||+|+|..+.+|++......... ++++|..-++ .+|++++++|++.+++.. ...+
T Consensus 35 ~~idFg~v~~~~~~~~~l~i~N~g~~pa~f~f~~~~~~~~~~~~wl~v~p~~g~l-~Pge~~~i~l~~~v~~~~~~~ln~ 113 (366)
T 3qis_A 35 REFVFENVKFRQLQKEKFQISNNGQVPCHFSFIPKLNDSQYCKPWLRAEPFEGYL-EPNETVDISLDVYVSKDSVTILNS 113 (366)
T ss_dssp SEEEEEEECBTCCEEEEEEEEECSSSCEEEEEECCTTCSSSSCTTEEEESCEEEE-CTTCEEEEEEEECBCTTTHHHHHH
T ss_pred CeEEeeeeeeCCeEEEEEEEEecCCceEEEEEEeCCCCCCCCCCcEEEeCCccEE-CCCCEEEEEEEEEECHHHHHHHhc
Confidence 355555554 4678888999999999999999764332222 7788999888 899999999999984200 0000
Q ss_pred -CceEEEEEEEE-cCcceEEEEEEEE
Q 047013 756 -TDYVFGELVWS-DGFHNVKSTIAVK 779 (781)
Q Consensus 756 -~~~~~G~i~~~-~~~~~v~~P~~~~ 779 (781)
..-++--|++. +++....+|+-..
T Consensus 114 g~~~l~diLvL~ve~G~d~FI~v~~~ 139 (366)
T 3qis_A 114 GEDKIEDILVLHLDRGKDYFLTISGN 139 (366)
T ss_dssp TSSCSCEEEEEEETTSCEEEEEEEEE
T ss_pred CccccceEEEEEEeCCCcEEEEeccc
Confidence 12234455553 4455556665443
No 56
>2qsv_A Uncharacterized protein; MCSG, structural genomics, porphyromonas gingivalis W83, PSI protein structure initiative; 2.10A {Porphyromonas gingivalis}
Probab=78.38 E-value=14 Score=36.04 Aligned_cols=88 Identities=11% Similarity=0.182 Sum_probs=54.4
Q ss_pred CeEEEecCCCCcEEEEEEEEecCCCCeeEEEEEecCCceEEEEeecEEEEcCCCcEEEEEEEEEeecCCCCCCCc-e--E
Q 047013 683 PSIAVPNLVNGSMTVSRRLKNVGTPTCTYKAQITEIVGVSAVVEPITLNFTKYGEELTFKITFSVKGNDKPVATD-Y--V 759 (781)
Q Consensus 683 ps~~~~~~~~~~~~~~~tv~n~~~~~~~y~~~~~~~~~~~v~~~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~-~--~ 759 (781)
..+.++.+.+...+.+++++|.|+.+...+-......-..+..... .+ .+||+.+++|++..+ ...+. | .
T Consensus 124 ~~~dfG~i~g~~~~~~f~i~N~G~~pL~I~~v~~scgct~~~~~~~--~i-~PGe~~~i~v~~~~~----~~~g~~~~~~ 196 (220)
T 2qsv_A 124 TYLDMGQLDGETTKAAIEIRNVGAGPLRLHSVTTRNPALTAVPDRT--EI-KPGGSTLLRIAVDPQ----VMKAEGWQSI 196 (220)
T ss_dssp CEEEEEECTTSCEEEEEEEEECSSSCEEEEEEEECSTTEEEEESCS--EE-CTTCEEEEEEEECHH----HHHHTTCSEE
T ss_pred eEEeeeccCCCeEEEEEEEEECCCCCEEEEEEEeCCCCEeeecCCc--cC-CCCCEEEEEEEEecC----CCCCccccee
Confidence 4566665554678889999999998887754444443444444333 34 799999999999873 12233 1 4
Q ss_pred EEEEEEE-cC--cceEEEEEE
Q 047013 760 FGELVWS-DG--FHNVKSTIA 777 (781)
Q Consensus 760 ~G~i~~~-~~--~~~v~~P~~ 777 (781)
...|.+. ++ ...+++.+-
T Consensus 197 ~~~i~v~~N~~~~p~~~l~i~ 217 (220)
T 2qsv_A 197 AADISIICNDPQAPLRRIKVK 217 (220)
T ss_dssp EEEEEEEESCTTCSEEEEEEE
T ss_pred ccEEEEEECCCCCcEEEEEEE
Confidence 5666553 32 344566553
No 57
>1z9l_A Vesicle-associated membrane protein-associated protein A; VAP-A, cytoplasmic domain, protein binding; HET: MSE; 1.70A {Rattus norvegicus} PDB: 1z9o_A 2rr3_A 3ikk_A
Probab=67.67 E-value=26 Score=30.86 Aligned_cols=52 Identities=17% Similarity=0.185 Sum_probs=43.6
Q ss_pred CcEEEEEEEEecCCCCeeEEEEEecCCceEEEEeecEEEEcCCCcEEEEEEEEEe
Q 047013 693 GSMTVSRRLKNVGTPTCTYKAQITEIVGVSAVVEPITLNFTKYGEELTFKITFSV 747 (781)
Q Consensus 693 ~~~~~~~tv~n~~~~~~~y~~~~~~~~~~~v~~~p~~~~~~~~g~~~~~~vt~~~ 747 (781)
...+-+++|+|.++...-|++..++|.- ..|.|..=.+ .+|++..++|++.+
T Consensus 27 ~~~~~~l~L~N~s~~~vaFKVKTT~p~~--y~VrP~~G~i-~P~~s~~v~V~~~~ 78 (128)
T 1z9l_A 27 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGVI-DPGSIVTVSVMLQP 78 (128)
T ss_dssp SCEEEEEEEECCSSSCEEEEEEESCGGG--EEEESCEEEE-CTTCEEEEEEEECC
T ss_pred ceEEEEEEEECCCCCeEEEEEECCCCCc--eEEeCCCcEE-CCCCeEEEEEEECc
Confidence 4678889999999999999999988865 4556777666 78999999999987
No 58
>3idu_A Uncharacterized protein; all beta-protein, structural genomics, PSI-2, protein structure initiative; 1.70A {Pyrococcus furiosus} PDB: 2kl6_A
Probab=64.68 E-value=31 Score=30.50 Aligned_cols=52 Identities=17% Similarity=0.114 Sum_probs=36.1
Q ss_pred CCcEEEEEEEEecCCCC-eeEEEEEecCCceEEEEeecEEEEcCCCcEEEEEEEEEe
Q 047013 692 NGSMTVSRRLKNVGTPT-CTYKAQITEIVGVSAVVEPITLNFTKYGEELTFKITFSV 747 (781)
Q Consensus 692 ~~~~~~~~tv~n~~~~~-~~y~~~~~~~~~~~v~~~p~~~~~~~~g~~~~~~vt~~~ 747 (781)
+...++++||+|.|..+ ..|++.+-.. |-.+.- ..+.+ ++|++++|+++..+
T Consensus 32 G~~~ti~vtV~N~G~~~a~~~~V~lyvn-g~~v~t--~~v~L-a~G~s~tv~f~~~~ 84 (127)
T 3idu_A 32 NKLAEYEVHVKNLGGIGVPSTKVRVYIN-GTLYKN--WTVSL-GPKEEKVLTFNWTP 84 (127)
T ss_dssp TCCEEEEEEEEECSSSCEEEEEEEEEET-TEEEEE--EEEEE-CTTCEEEEEEEECC
T ss_pred CCEEEEEEEEEECCCCccCCcEEEEEEC-CEEEee--EEecc-CCCCeEEEEEEEEc
Confidence 37899999999999854 5677766543 443332 23456 78999987777765
No 59
>1wic_A Hypothetical protein riken cDNA 6030424E15; beta sandwich fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.1.11.2
Probab=59.80 E-value=22 Score=32.44 Aligned_cols=52 Identities=17% Similarity=0.146 Sum_probs=43.4
Q ss_pred CcEEEEEEEEecCCCCeeEEEEEecCCceEEEEeecEEEEcCCCcEEEEEEEEEe
Q 047013 693 GSMTVSRRLKNVGTPTCTYKAQITEIVGVSAVVEPITLNFTKYGEELTFKITFSV 747 (781)
Q Consensus 693 ~~~~~~~tv~n~~~~~~~y~~~~~~~~~~~v~~~p~~~~~~~~g~~~~~~vt~~~ 747 (781)
...+-+++|+|..+....|++..++|.- ..|.|..=.+ .+|++.+++|++..
T Consensus 35 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~V~V~lq~ 86 (152)
T 1wic_A 35 GEKKTLIVLTNVTKNIVAFKVRTTAPEK--YRVKPSNSSC-DPGASIDIIVSPHG 86 (152)
T ss_dssp SCCCEEEEEEBCSSSCEEEEEEESCTTT--EEEESSEEEE-CTTCEEEEEEEECS
T ss_pred ceEEEEEEEEcCCCCeEEEEEECCCCCc--eeecCCCcEE-CCCCeEEEEEEecC
Confidence 3456789999999999999999988865 5556877777 78999999999987
No 60
>1m1s_A WR4; structural genomics, major sperm protein, bioinformatics, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=59.15 E-value=41 Score=29.14 Aligned_cols=50 Identities=8% Similarity=0.028 Sum_probs=41.3
Q ss_pred EEEEEEEEecCCCCeeEEEEEecCCceEEEEeecEEEEcCCCcEEEEEEEEEe
Q 047013 695 MTVSRRLKNVGTPTCTYKAQITEIVGVSAVVEPITLNFTKYGEELTFKITFSV 747 (781)
Q Consensus 695 ~~~~~tv~n~~~~~~~y~~~~~~~~~~~v~~~p~~~~~~~~g~~~~~~vt~~~ 747 (781)
.+.+++|+|.++....|++..+.+.-.. |.|..=.+ .+|++.+++|+..+
T Consensus 25 g~~~l~L~N~t~~~vAFKVKtT~p~~Yr--VrP~~G~I-~Pg~~~~I~I~~q~ 74 (116)
T 1m1s_A 25 GNSTHNITSESDSRLAFKVKSSNNEHYR--VRPVYGFV-DAKGKSKLDINRLP 74 (116)
T ss_dssp EEEEEEEEECSSSEEEEEEEESCTTTEE--EECSEEEE-CTTCEEEEEEEECS
T ss_pred CEEEEEEECCCCCeEEEEEEecCCCceE--EcCCceEE-CCCCeEEEEEEeCC
Confidence 4778899999999999999988886644 55776666 78999999999987
No 61
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=58.71 E-value=25 Score=30.72 Aligned_cols=69 Identities=13% Similarity=0.069 Sum_probs=44.3
Q ss_pred CcEEEEEEEEecCCCCeeEE--------EEEecCCceEEE---------EeecEEEEcCCCcEEEEEEEEEeecCCCCCC
Q 047013 693 GSMTVSRRLKNVGTPTCTYK--------AQITEIVGVSAV---------VEPITLNFTKYGEELTFKITFSVKGNDKPVA 755 (781)
Q Consensus 693 ~~~~~~~tv~n~~~~~~~y~--------~~~~~~~~~~v~---------~~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~ 755 (781)
+...++++|+|.++.+.+.+ +.+....|-.|. --....++ ++||+++|+++.+. ....
T Consensus 18 ~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~~~~tl-~pGE~~~f~~~w~~----~~~p 92 (120)
T 3isy_A 18 EQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAFQNLTL-ESGETYDFSDVWKE----VPEP 92 (120)
T ss_dssp SCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCCEEEEE-CTTCEEEEEEEESS----CCCS
T ss_pred CeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhhceEEE-CCCCEEEEEEEeCC----CCCC
Confidence 68899999999998655544 344443444443 11234566 89999999999883 2233
Q ss_pred C-ceEEEEEEEE
Q 047013 756 T-DYVFGELVWS 766 (781)
Q Consensus 756 ~-~~~~G~i~~~ 766 (781)
| +.+.+++.-.
T Consensus 93 G~Ytl~a~l~~~ 104 (120)
T 3isy_A 93 GTYEVKVTFKGR 104 (120)
T ss_dssp EEEEEEEEECCE
T ss_pred ccEEEEEEEEee
Confidence 3 4477776643
No 62
>3zyz_A Beta-D-glucoside glucohydrolase; HET: NAG BGC; 2.10A {Hypocrea jecorina} PDB: 3zz1_A* 4i8d_A*
Probab=57.44 E-value=25 Score=40.84 Aligned_cols=55 Identities=24% Similarity=0.153 Sum_probs=35.2
Q ss_pred CcEEEEEEEEecCCCCeeEEEE--EecCCce-----EEEEeecEEEEcCCCcEEEEEEEEEee
Q 047013 693 GSMTVSRRLKNVGTPTCTYKAQ--ITEIVGV-----SAVVEPITLNFTKYGEELTFKITFSVK 748 (781)
Q Consensus 693 ~~~~~~~tv~n~~~~~~~y~~~--~~~~~~~-----~v~~~p~~~~~~~~g~~~~~~vt~~~~ 748 (781)
...+++++|||+|+.+..-.+. +..|.+. +--.--..+.+ ++||+++++++++..
T Consensus 613 ~~~~vsv~VtNtG~~~G~EVvQlYv~~~~~~~~~P~k~L~gF~kv~L-~pGes~~V~~~l~~~ 674 (713)
T 3zyz_A 613 NVATVTVDIANSGQVTGAEVAQLYITYPSSAPRTPPKQLRGFAKLNL-TPGQSGTATFNIRRR 674 (713)
T ss_dssp EEEEEEEEEEECSSSCEEEEEEEEEECCTTSSSCCSCEEEEEEEEEE-CTTCEEEEEEEEEGG
T ss_pred CeEEEEEEEEeCCCCccceeeeeeeecCCCCCCchhHHhhhccccee-CCCCeEEEEEEEcHH
Confidence 4578899999999876655544 3433221 11111233456 899999999999874
No 63
>2cri_A Vesicle-associated membrane protein-associated protein A; VAP-A, VAP-33, beta sandwitch fold, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=57.21 E-value=32 Score=31.14 Aligned_cols=52 Identities=17% Similarity=0.181 Sum_probs=43.1
Q ss_pred CcEEEEEEEEecCCCCeeEEEEEecCCceEEEEeecEEEEcCCCcEEEEEEEEEe
Q 047013 693 GSMTVSRRLKNVGTPTCTYKAQITEIVGVSAVVEPITLNFTKYGEELTFKITFSV 747 (781)
Q Consensus 693 ~~~~~~~tv~n~~~~~~~y~~~~~~~~~~~v~~~p~~~~~~~~g~~~~~~vt~~~ 747 (781)
...+-.++|+|.++...-|++..++|.- ..|.|..=.+ .+|++..++|++.+
T Consensus 31 ~~~~~~l~L~N~s~~~VaFKVKTT~p~~--y~VrP~~GiI-~P~~s~~v~V~l~~ 82 (147)
T 2cri_A 31 DVVTTNLKLQNPSDRKVCFKVKTTAPRR--YCVRPNSGII-DPGSIVTVSVMLQP 82 (147)
T ss_dssp SCCCEEEEEECCSSSCEEEEEEESCTTS--EEEESSEEEC-CTTCEEEEEEEECC
T ss_pred ceEEEEEEEECCCCCcEEEEEECCCCcc--EEEcCCCcEE-CCCCeEEEEEEECC
Confidence 4567789999999999999999998865 4556776666 78999999999987
No 64
>1msp_A MSP, major sperm protein; cytoskeletal protein, cell motility protein; 2.50A {Ascaris suum} SCOP: b.1.11.2 PDB: 3msp_A 2bvu_A 2msp_A 1grw_A
Probab=57.02 E-value=44 Score=29.34 Aligned_cols=52 Identities=13% Similarity=0.175 Sum_probs=42.9
Q ss_pred CcEEEEEEEEecCCCCeeEEEEEecCCceEEEEeecEEEEcCCCcEEEEEEEEEe
Q 047013 693 GSMTVSRRLKNVGTPTCTYKAQITEIVGVSAVVEPITLNFTKYGEELTFKITFSV 747 (781)
Q Consensus 693 ~~~~~~~tv~n~~~~~~~y~~~~~~~~~~~v~~~p~~~~~~~~g~~~~~~vt~~~ 747 (781)
...+-.++|+|.++...-|.+..++|.- ..|.|..=.+ .+|++..++|++.+
T Consensus 25 ~~~~~~l~l~N~s~~~vaFKVKTT~p~~--y~VrP~~Gii-~P~~s~~v~V~~q~ 76 (126)
T 1msp_A 25 DKHTYHIKITNAGGRRIGWAIKTTNMRR--LSVDPPCGVL-DPKEKVLMAVSCDT 76 (126)
T ss_dssp SCCCEEEEEEECSSSCEEEEEEESCTTT--EEEESCEEEE-CTTCEEEEEEEECC
T ss_pred cceEEEEEEECCCCCeEEEEEEcCCCCc--EEEECCCeEE-CCCCEEEEEEEecC
Confidence 3566778999999999999999988865 4556777667 78999999999887
No 65
>1row_A SSP-19, MSP-domain protein like family member; beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Caenorhabditis elegans} SCOP: b.1.11.2
Probab=56.52 E-value=38 Score=28.96 Aligned_cols=49 Identities=14% Similarity=0.118 Sum_probs=40.6
Q ss_pred EEEEEEEecCCCCeeEEEEEecCCceEEEEeecEEEEcCCCcEEEEEEEEEe
Q 047013 696 TVSRRLKNVGTPTCTYKAQITEIVGVSAVVEPITLNFTKYGEELTFKITFSV 747 (781)
Q Consensus 696 ~~~~tv~n~~~~~~~y~~~~~~~~~~~v~~~p~~~~~~~~g~~~~~~vt~~~ 747 (781)
+-+++|+|.++....|++..+++.-. .|.|..=.+ .+|++.+++|+..+
T Consensus 18 ~~~l~L~N~t~~~vaFKVKtT~p~~y--~VrP~~G~I-~P~~~~~i~I~~q~ 66 (109)
T 1row_A 18 SSTHKLVNGGAEKIVFKIKSSNNNEY--RIAPVFGFV-DPSGSKDVVITRTA 66 (109)
T ss_dssp EEEEEEEECSSSCEEEEEEESCSSSE--EEECSEEEE-CTTEEEEEEEEECS
T ss_pred eEEEEEEcCCCCeEEEEEEeCCCCce--EEcCCceEE-CCCCeEEEEEEeCC
Confidence 57889999999999999999888664 455776666 78999999999887
No 66
>2x41_A Beta-glucosidase; hydrolase, TIM barrel fold, fibronectin type III fold; HET: BGC; 2.05A {Thermotoga neapolitana} PDB: 2x40_A* 2x42_A*
Probab=55.09 E-value=23 Score=41.28 Aligned_cols=56 Identities=16% Similarity=0.154 Sum_probs=34.7
Q ss_pred CcEEEEEEEEecCCCCeeEE--EEEecCCce-----EEEEeecEE-EEcCCCcEEEEEEEEEeec
Q 047013 693 GSMTVSRRLKNVGTPTCTYK--AQITEIVGV-----SAVVEPITL-NFTKYGEELTFKITFSVKG 749 (781)
Q Consensus 693 ~~~~~~~tv~n~~~~~~~y~--~~~~~~~~~-----~v~~~p~~~-~~~~~g~~~~~~vt~~~~~ 749 (781)
...+++++|||+|+.+..-. +-+..|.+. +--.--..+ .+ ++||+++++++++..+
T Consensus 615 ~~~~v~v~VtNtG~~~G~eVvQlYv~~~~~~~~~P~k~L~gF~kv~~L-~pGes~~V~~~l~~~~ 678 (721)
T 2x41_A 615 ETLRVQYRIENTGGRAGKEVSQVYIKAPKGKIDKPFQELKAFHKTRLL-NPGESEEVVLEIPVRD 678 (721)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEEECCCSSSCCCSCEEEEEEECCCB-CTTCEEEEEEEEEGGG
T ss_pred CeEEEEEEEEECCCCCCcEEeeEEEccCCCCCCCchHHhhcccccccC-CCCCeEEEEEEECHHH
Confidence 56889999999998654433 334444221 100111223 34 8999999999999754
No 67
>3abz_A Beta-glucosidase I; glycoside hydrolase family3 beta-glucosidase, PA14 domain, H; 2.15A {Kluyveromyces marxianus} PDB: 3ac0_A*
Probab=54.63 E-value=37 Score=40.22 Aligned_cols=44 Identities=18% Similarity=0.180 Sum_probs=30.9
Q ss_pred ceeeccccchhhHHHHHHHHHHHhCCCCC-HHHHHHHHHhccccC
Q 047013 557 YNVMSGTSMACPHVAGIAGLVKTLHPDWS-PAAIKSAIMTTATTE 600 (781)
Q Consensus 557 y~~~sGTSmAaP~VAG~aALl~q~~p~lt-~~~ik~~L~~TA~~~ 600 (781)
...++|..++-|-+--+-|+|..++|.-- ...|.++|.--..+-
T Consensus 619 VVl~sG~pv~m~w~~~v~AIL~aw~pGqegG~AiAdVLfG~vNPS 663 (845)
T 3abz_A 619 IVNQSGTPVEFPWLEDANALVQAWYGGNELGNAIADVLYGDVVPN 663 (845)
T ss_dssp EEEECSSCCCCTTGGGCSEEEECCCCCTTHHHHHHHHHTTSSCCC
T ss_pred EEEeCCCcccCcchhccCeEEEcCCCcHHHHHHHHHHhcCCcCCC
Confidence 45567777777777777778888887665 567778887665553
No 68
>1w8o_A Bacterial sialidase; 3D-structure, glycosidase, hydrolase, beta- propeller; HET: LBT CIT; 1.70A {Micromonospora viridifaciens} SCOP: b.1.18.2 b.18.1.1 b.68.1.1 PDB: 1w8n_A* 1eut_A 1euu_A* 1wcq_A* 2bzd_A* 2ber_A* 1eur_A 1eus_A*
Probab=50.16 E-value=95 Score=34.88 Aligned_cols=62 Identities=15% Similarity=0.081 Sum_probs=42.1
Q ss_pred CCCeEEEecCCCCcEEEEEEEEecCCCCeeE-EEEEecCCceEEEEeecEEEEcCCCcEEEEEEEEEe
Q 047013 681 NYPSIAVPNLVNGSMTVSRRLKNVGTPTCTY-KAQITEIVGVSAVVEPITLNFTKYGEELTFKITFSV 747 (781)
Q Consensus 681 n~ps~~~~~~~~~~~~~~~tv~n~~~~~~~y-~~~~~~~~~~~v~~~p~~~~~~~~g~~~~~~vt~~~ 747 (781)
..|.+++... ++.+++++|+|-+..+..- ++++..+.+.+++. ....+ ++|++.+++++|++
T Consensus 363 ~~~~~~~~~g--~~~~~~~~vtn~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~g~~~t~~~~vt~ 425 (601)
T 1w8o_A 363 TIPDVALEPG--QQVTVPVAVTNQSGIAVPKPSLQLDASPDWQVQG--SVEPL-MPGRQAKGQVTITV 425 (601)
T ss_dssp ECCCEEECTT--CEEEEEEEEECCSSSCBSSCEEEEECCTTSEEEE--EECCB-CTTCEEEEEEEEEC
T ss_pred cCccceecCC--ceeEEEEEEECCCceeccCceEEEecCCCcEEec--ccccc-CCCCceEEEEEEec
Confidence 3466776644 5888999999976533322 34455677777766 23445 67999999888888
No 69
>1wgl_A TOLL-interacting protein; CUE domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, immune system; NMR {Homo sapiens} SCOP: a.5.2.4
Probab=37.82 E-value=22 Score=26.82 Aligned_cols=34 Identities=12% Similarity=0.141 Sum_probs=26.8
Q ss_pred cchhhHHHHHHHHHHHhCCCCCHHHHHHHHHhcc
Q 047013 564 SMACPHVAGIAGLVKTLHPDWSPAAIKSAIMTTA 597 (781)
Q Consensus 564 SmAaP~VAG~aALl~q~~p~lt~~~ik~~L~~TA 597 (781)
|-..|..--.+..|++.||+++...|+..|...=
T Consensus 3 ~~~~~~~ee~l~~L~emFP~ld~~~I~~vL~a~~ 36 (59)
T 1wgl_A 3 SGSSGCSEEDLKAIQDMFPNMDQEVIRSVLEAQR 36 (59)
T ss_dssp SCSSSSCHHHHHHHHHHCSSSCHHHHHHHHTTTT
T ss_pred CCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHcC
Confidence 3344445567788999999999999999998763
No 70
>4ay0_A Chaperone protein CAF1M; amino acid motifs, bacterial capsules, bacterial proteins, gene expression regulation, molecular chaperones, binding; 1.52A {Yersinia pestis} PDB: 1p5v_A 1p5u_A 1z9s_A 2os7_A 3dos_A 3dpb_A 3dsn_A 4b0m_M 4az8_A 4ayf_A
Probab=34.81 E-value=2.3e+02 Score=27.30 Aligned_cols=59 Identities=15% Similarity=0.054 Sum_probs=40.7
Q ss_pred CcEEEEEEEEecCCCCeeEEEE--EecC-----CceEEEEeecEEEEcCCCcEEEEEEEEEeecCCCCCCCc
Q 047013 693 GSMTVSRRLKNVGTPTCTYKAQ--ITEI-----VGVSAVVEPITLNFTKYGEELTFKITFSVKGNDKPVATD 757 (781)
Q Consensus 693 ~~~~~~~tv~n~~~~~~~y~~~--~~~~-----~~~~v~~~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~ 757 (781)
+.+..+++|+|.++.+ |-+. ++.. ...-+.++|..+++ .+|+...++|.... ...+.+.
T Consensus 26 ~~k~~sl~l~N~~~~p--~LvQswv~~~~~~~~~~~pFivtPPl~Rl-~p~~~q~lRI~~~~---~~LP~DR 91 (218)
T 4ay0_A 26 DAAGVMVSVKNTQDYP--VLIQSRIYDENKEKESEDPFVVTPPLFRL-DAKQQNSLRIAQAG---GVFPRDK 91 (218)
T ss_dssp TCSCEEEEEECCSSSC--EEEEEEEECTTSCCCSSCSEEEESSEEEE-CTTCEEEEEEEECS---CCCCSSS
T ss_pred CCcEEEEEEEcCCCCC--EEEEEEEecCCCCccccCCEEECCCeEEe-CCCCceEEEEEecC---CCCCcCc
Confidence 5678899999988654 4444 3321 12337889999999 78999999997765 3445443
No 71
>2l0d_A Cell surface protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Methanosarcina acetivorans}
Probab=34.10 E-value=1.3e+02 Score=25.87 Aligned_cols=24 Identities=13% Similarity=0.328 Sum_probs=17.6
Q ss_pred CcEEEEEEEEecCCC-CeeEEEEEe
Q 047013 693 GSMTVSRRLKNVGTP-TCTYKAQIT 716 (781)
Q Consensus 693 ~~~~~~~tv~n~~~~-~~~y~~~~~ 716 (781)
...+++.+|+|.|.. ...+++.+.
T Consensus 19 ~~~ti~atVkN~G~~~a~~~~V~ly 43 (114)
T 2l0d_A 19 TVNTMTATIENQGNKDSTSFNVSLL 43 (114)
T ss_dssp SEEEEEEEEEECSSSCBCCEEEEEE
T ss_pred CeEEEEEEEEECCCCCCCCEEEEEE
Confidence 688999999999974 344555543
No 72
>3q48_A Chaperone CUPB2; IG fold, periplasmic chaperone; 2.50A {Pseudomonas aeruginosa}
Probab=30.88 E-value=2.8e+02 Score=27.39 Aligned_cols=52 Identities=19% Similarity=0.185 Sum_probs=37.8
Q ss_pred CcEEEEEEEEecCCCCeeEEEE--EecCC--------ceEEEEeecEEEEcCCCcEEEEEEEEEe
Q 047013 693 GSMTVSRRLKNVGTPTCTYKAQ--ITEIV--------GVSAVVEPITLNFTKYGEELTFKITFSV 747 (781)
Q Consensus 693 ~~~~~~~tv~n~~~~~~~y~~~--~~~~~--------~~~v~~~p~~~~~~~~g~~~~~~vt~~~ 747 (781)
+....+++|+|.++. .|-+. ++... ..-+.++|..+++ .+|++++++|....
T Consensus 42 ~~k~~sl~l~N~~~~--P~LvQsWid~~~~~~~p~~~~~pfivtPPl~rl-~pg~~q~lRI~~~~ 103 (257)
T 3q48_A 42 SEREVTLRVSNTSGT--PVLAQAWIDDGRQDVPPEELQVPFSVTPAVTRV-EPNGGAVLRIAYLK 103 (257)
T ss_dssp TCSEEEEEEEECSSS--CEEEEEEEESSCCSSCGGGGCCSEEEESSEEEE-CTTEEEEEEEEECC
T ss_pred CCcEEEEEEEeCCCC--eEEEEEEEEcCCCccCcccccCCEEEcCCEEEE-CCCCceEEEEEECC
Confidence 467789999998865 45444 33211 2348899999999 78999999987665
No 73
>1ni7_A ER75, hypothetical protein YGDK; RD-structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Escherichia coli} SCOP: d.224.1.1
Probab=28.23 E-value=42 Score=30.72 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=28.2
Q ss_pred eeeccccchhhHHHHHHHHHHHhCCCCCHHHHHHH
Q 047013 558 NVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKSA 592 (781)
Q Consensus 558 ~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~~ 592 (781)
..+.|-| =|++|-|++|||.+.+-..+|++|.+.
T Consensus 77 l~F~adS-DA~IvkGL~AlL~~~~~G~tp~eIl~~ 110 (155)
T 1ni7_A 77 MHFFGDS-EGRIVRGLLAVLLTAVEGKTAAELQAQ 110 (155)
T ss_dssp CCCEEEE-SSHHHHHHHHHHHHHTTTCCHHHHHHS
T ss_pred EEEeeCC-ccHHHHHHHHHHHHHHcCCCHHHHHhC
Confidence 3445666 579999999999999999999998653
No 74
>3rfr_A PMOB; membrane, oxidoreductase; 2.68A {Methylocystis SP} PDB: 3chx_A
Probab=25.00 E-value=1e+02 Score=32.47 Aligned_cols=50 Identities=12% Similarity=0.104 Sum_probs=32.8
Q ss_pred CCcEEEEEEEEecCCCCeeEEE-E-----Eec----------C------CceEEEEeecEEEEcCCCcEEEEEEEEEe
Q 047013 692 NGSMTVSRRLKNVGTPTCTYKA-Q-----ITE----------I------VGVSAVVEPITLNFTKYGEELTFKITFSV 747 (781)
Q Consensus 692 ~~~~~~~~tv~n~~~~~~~y~~-~-----~~~----------~------~~~~v~~~p~~~~~~~~g~~~~~~vt~~~ 747 (781)
....+++++|||.|+++....= . .-. | .| ++ +|+ -+ .+||+++++|+++-
T Consensus 297 gR~l~~~~~VtN~g~~pvrlgeF~tA~vrFlnp~v~~~~~~~p~~l~a~~G--L~-s~~--pI-~PGETrt~~V~a~d 368 (419)
T 3rfr_A 297 GRELTINVKVKNGTSQPVRLGEYTAAGLRFLNPTVFTQKPDFPDYLLADRG--LS-NDD--VI-APGESKEIVVKIQD 368 (419)
T ss_dssp SSEEEEEEEEECCSSSCBEEEEEECSSCEEECTTTCSSCCCCCTTTEESCC--CC-CCC--CB-CTTCEEEEEEEEEC
T ss_pred CcEEEEEEEEecCCCCceEEeeEEEccEEEeCcccccCCCCCchhhhhccC--CC-CCC--Cc-CCCcceEEEEEeeh
Confidence 3678899999999987653221 1 000 1 13 34 555 45 79999999988874
No 75
>3gfu_C Chaperone protein FAEE; immunoglobulin like fold, chaperone, fimbrium, immunoglobulin domain, periplasm, plasmid, cell adhesion; 1.99A {Escherichia coli} PDB: 3gew_B 3f65_A 3f6i_A 3f6l_A
Probab=24.76 E-value=3.9e+02 Score=25.83 Aligned_cols=53 Identities=19% Similarity=0.246 Sum_probs=35.5
Q ss_pred CcEEEEEEEEecCCCCeeEEEE--EecC----CceEEEEeecEEEEcCCCcEEEEEEEEEe
Q 047013 693 GSMTVSRRLKNVGTPTCTYKAQ--ITEI----VGVSAVVEPITLNFTKYGEELTFKITFSV 747 (781)
Q Consensus 693 ~~~~~~~tv~n~~~~~~~y~~~--~~~~----~~~~v~~~p~~~~~~~~g~~~~~~vt~~~ 747 (781)
+....+++|+|.++. ..|-+. ++.. ...-+.++|..+++ .+|+...++|....
T Consensus 14 ~~k~~sl~l~N~~~~-~p~LvQsWid~~~~~~~~~pfivtPPlfRl-ep~~~q~lRIi~~~ 72 (224)
T 3gfu_C 14 DKDALTITVTNNDKE-RTFGGQAWVDNIVEKDTRPTFVVTPSFFKV-KPNGQQTLRIIMAS 72 (224)
T ss_dssp TSSCEEEEEEECCSS-CCEEEEEEEEESSCCSCSCSEEEESSEEEE-CTTCEEEEEEEECS
T ss_pred CCceEEEEEEeCCCC-ccEEEEEEEecCCCCcccCCEEEcCCeEEE-CCCCceEEEEEECC
Confidence 456788889998753 134332 2211 12348889999999 78999988887654
No 76
>3g0m_A Cysteine desulfuration protein SUFE; YNHA, csgid, national I of allergy and infectious diseases, niaid, hydrolase, struc genomics; 1.76A {Salmonella typhimurium LT2} SCOP: d.224.1.1 PDB: 1mzg_A
Probab=24.12 E-value=40 Score=30.32 Aligned_cols=34 Identities=21% Similarity=0.219 Sum_probs=28.7
Q ss_pred ceeeccccchhhHHHHHHHHHHHhCCCCCHHHHHH
Q 047013 557 YNVMSGTSMACPHVAGIAGLVKTLHPDWSPAAIKS 591 (781)
Q Consensus 557 y~~~sGTSmAaP~VAG~aALl~q~~p~lt~~~ik~ 591 (781)
-..+.|-| =|++|-|++||+.+.+-..+|++|.+
T Consensus 69 ~l~f~adS-DA~IvkGl~alL~~~~~G~tp~eIl~ 102 (141)
T 3g0m_A 69 IIELQGDS-DAAIVKGLMAVVFILYHQMTAQDIVH 102 (141)
T ss_dssp BEEEEEEE-SSHHHHHHHHHHHHHHTTCBHHHHHH
T ss_pred EEEEEecC-ccHHHHHHHHHHHHHHcCCCHHHHHh
Confidence 35566777 47999999999999999999999864
No 77
>3ndz_E Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_E*
Probab=23.98 E-value=3.2e+02 Score=22.96 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=23.1
Q ss_pred CcEEEEEEEEecCCCCe-eEEEEEecCCceEE
Q 047013 693 GSMTVSRRLKNVGTPTC-TYKAQITEIVGVSA 723 (781)
Q Consensus 693 ~~~~~~~tv~n~~~~~~-~y~~~~~~~~~~~v 723 (781)
.-.+.+++|+|.+..+. .|+++..-|.|.+|
T Consensus 15 ~Gf~~~vtVtN~g~~~i~gWtv~~~~p~g~~i 46 (107)
T 3ndz_E 15 SGASVNVTIKNNGTTPINGWTLKWTMPINQTI 46 (107)
T ss_dssp SEEEEEEEEEECSSSCEESCEEEEECCTTEEE
T ss_pred CCEEEEEEEEeCCCCcccCcEEEEEcCCCCEE
Confidence 45778899999987554 58888887766554
No 78
>4djm_A DRAB; chaperone, PILI; 2.52A {Escherichia coli}
Probab=23.44 E-value=4.1e+02 Score=25.86 Aligned_cols=52 Identities=13% Similarity=0.021 Sum_probs=37.1
Q ss_pred CcEEEEEEEEecCCCCeeEEEE--EecC---CceEEEEeecEEEEcCCCcEEEEEEEEEe
Q 047013 693 GSMTVSRRLKNVGTPTCTYKAQ--ITEI---VGVSAVVEPITLNFTKYGEELTFKITFSV 747 (781)
Q Consensus 693 ~~~~~~~tv~n~~~~~~~y~~~--~~~~---~~~~v~~~p~~~~~~~~g~~~~~~vt~~~ 747 (781)
.....+++|+|.++.+ |-+. ++.. ...-+.++|..+++ .+|+...++|....
T Consensus 36 ~~k~~sl~l~N~~~~P--~LvQsWv~~~~~~~~~pfivtPPlfRl-ep~~~q~lRIi~~~ 92 (239)
T 4djm_A 36 ASSGETLTVINDQDYP--MLVQSEVLSEDQKSPAPFVVTPPLFRL-DGQQSSRLRIVRTG 92 (239)
T ss_dssp TSSCEEEEEEECSSSC--EEEEEEEECTTSSSBCSEEEESSEEEE-CTTEEEEEEEEECS
T ss_pred CCCEEEEEEEeCCCCc--EEEEEEEEcCCCCccCCEEEcCCeEEE-CCCCceEEEEEECC
Confidence 5677889999988543 5544 3321 12348899999999 78999988887654
No 79
>2xg5_A PAPD, chaperone protein PAPD; chaperone, chaperone-surface active protein complex; HET: EC2 EC5; 2.00A {Escherichia coli} PDB: 1pdk_A 2uy6_A 2uy7_A 2j2z_A 2xg4_A* 2w07_A* 3me0_A* 1n0l_A 2wmp_A 3dpa_A 2j7l_A 1qpp_A 1qpx_A
Probab=23.44 E-value=3e+02 Score=26.46 Aligned_cols=53 Identities=13% Similarity=0.174 Sum_probs=37.0
Q ss_pred CcEEEEEEEEecCCCCeeEEEE--EecCC-----ceEEEEeecEEEEcCCCcEEEEEEEEEe
Q 047013 693 GSMTVSRRLKNVGTPTCTYKAQ--ITEIV-----GVSAVVEPITLNFTKYGEELTFKITFSV 747 (781)
Q Consensus 693 ~~~~~~~tv~n~~~~~~~y~~~--~~~~~-----~~~v~~~p~~~~~~~~g~~~~~~vt~~~ 747 (781)
+....+++|+|.++. ..|-+. ++... ..-+.++|..+++ .+|++..++|....
T Consensus 14 ~~k~~sl~l~N~~~~-~p~LvQsWi~~~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~ 73 (218)
T 2xg5_A 14 SEKSMTLDISNDNKQ-LPYLAQAWIENENQEKIITGPVIATPPVQRL-EPGAKSMVRLSTTP 73 (218)
T ss_dssp TSSEEEEEEEECCSS-SCEEEEEEEECTTSCEECSSSEEEECSEEEE-CTTCEEEEEEEECG
T ss_pred CCCEEEEEEEcCCCC-CcEEEEEEEecCCCCccccCCEEEcCCeEEE-CCCCceEEEEEecC
Confidence 567889999998854 134443 33221 1237889999999 78999988887664
No 80
>2kq1_A BH0266 protein; solution NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Bacillus halodurans}
Probab=23.20 E-value=21 Score=31.03 Aligned_cols=53 Identities=15% Similarity=0.147 Sum_probs=30.8
Q ss_pred EEEEEEEEecCCCCeeEEEEEe-cCCceEEEEeecEEEEc-CCCcEEEEEEEEEe
Q 047013 695 MTVSRRLKNVGTPTCTYKAQIT-EIVGVSAVVEPITLNFT-KYGEELTFKITFSV 747 (781)
Q Consensus 695 ~~~~~tv~n~~~~~~~y~~~~~-~~~~~~v~~~p~~~~~~-~~g~~~~~~vt~~~ 747 (781)
..+.+-|++.+....+..+.++ .|.|++++++|..++++ ..-.+++|.|++..
T Consensus 55 i~~~vDLs~l~~G~~~vpv~v~~lp~~v~v~v~P~~V~V~i~~~~~k~~pV~v~~ 109 (119)
T 2kq1_A 55 YEVFVDLTEAGEGSHTVDVEHRGFPGDLAVTVEPRMARVQLEERQTVSVPVTVEM 109 (119)
T ss_dssp CEEEEECTTCCBEEEEEECEEESSCTTSEEEESCCEEEEEEESCCCCCCCCCCCC
T ss_pred EEEEEECccCCCCeEEEEEEEecCCCCeEEEEcCCEEEEEEEEEEEEEEEEEEEE
Confidence 3444445565532223333445 57788888889877664 33455666666665
No 81
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=22.02 E-value=1.2e+02 Score=26.36 Aligned_cols=22 Identities=27% Similarity=0.394 Sum_probs=14.6
Q ss_pred EEEEeecEEEEcCCCcEEEEEEE
Q 047013 722 SAVVEPITLNFTKYGEELTFKIT 744 (781)
Q Consensus 722 ~v~~~p~~~~~~~~g~~~~~~vt 744 (781)
...++|..+++ ++|++.+|..+
T Consensus 15 ~~~F~P~~i~V-~~GdtV~f~~~ 36 (123)
T 3erx_A 15 AMVFEPAFVRA-EPGDVINFVPT 36 (123)
T ss_dssp EEEEESSEEEE-CTTEEEEEEES
T ss_pred cEeEeCCEEEE-CCCCEEEEEEC
Confidence 46667777777 67777666553
No 82
>2co7_B SAFB chaperone, putative fimbriae assembly chaperone; pilus subunit, adhesion, strand complementation, pathogenesis, fibril protein; 1.8A {Salmonella typhimurium} SCOP: b.1.11.1 b.7.2.1 PDB: 2co6_B
Probab=20.46 E-value=5.2e+02 Score=24.76 Aligned_cols=59 Identities=10% Similarity=0.094 Sum_probs=40.3
Q ss_pred CcEEEEEEEEecCCCCeeEEEE--EecC---CceEEEEeecEEEEcCCCcEEEEEEEEEeecCCCCCCCc
Q 047013 693 GSMTVSRRLKNVGTPTCTYKAQ--ITEI---VGVSAVVEPITLNFTKYGEELTFKITFSVKGNDKPVATD 757 (781)
Q Consensus 693 ~~~~~~~tv~n~~~~~~~y~~~--~~~~---~~~~v~~~p~~~~~~~~g~~~~~~vt~~~~~~~~~~~~~ 757 (781)
+....+++|+|.++. .|-+. ++.. ...-+.++|..+++ .+|++..++|.... ...+.+.
T Consensus 26 ~~k~~sl~l~N~~~~--p~LvQsWv~~~~~~~~~pfivtPPl~rl-~p~~~q~lRI~~~~---~~lP~Dr 89 (221)
T 2co7_B 26 GTAGATLSVSNPQNY--PILVQSSVKAADKSSPAPFLVMPPLFRL-EANQQSQLRIVRTG---GDMPTDR 89 (221)
T ss_dssp TSSCEEEEEECCSSS--CEEEEEEEEETTSSSBCSEEEESSEEEE-CTTCEEEEEEEECC---CCCCSSS
T ss_pred CCCEEEEEEEcCCCC--cEEEEEEEecCCCCccCCEEEeCCEEEE-CCCCceEEEEEECC---CCCCCCc
Confidence 567788899998864 44444 3321 23457889999999 78999999987765 2455443
Done!